ClCG11G017140 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G017140
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Unknown protein
Location	CG_Chr11: 30398940 .. 30400330 (+)
RNA-Seq Expression	ClCG11G017140
Synteny	ClCG11G017140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGTATTGGCTGATGTTCAAATATTGAAAATAACTACACCGGCAAGTTTCGACATAAAATCAAACTCACAATTATATAAAAATAATAATAATATATACCTTCCACTTGGTCATCATCCTCCCATGTCTTGAAAGCCATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACCCAACAAGCTTTCATTCTCTTTACGTGCACGGCGGTCGCGGTTGTTGGGTTCTGCGCGGCGGCGTGGGCGAAGAAGAGGAAGGGAGAGAAGGGAGAGAAGAAAGAGCGCCGAAGGACGACGGCAACGGAGAAGTGGTGGAAATGGGCGGCAGAAAGGCGGAAGGGGAGCGGCGGCGGAGAGACGCCGGTGCGGCTGTTGGGCAGAGAAGGGGAAGGGGAAGAATTGGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAACGGCCGATATTAATGGGGGAAAAGTGTGAGATGCTGAAATACAGTGGGCTTATTCTGTACGACGAAAGGGGACGATTGCTGCAGGAGCAAATCGCCGCCATGGAAAATGGTTACAAGGTGCTGCTTCGTAAGTTCTTTCGGATTTTTTTAATAGGGAAAAAAAAAAAAAAAAAGCGTTCAATGATTAAAAACATATTTACTCATACGACTTTAAAGAAAATGACATTATAATTTTTCTAATAATTGAAATTTAAGAATTTCGACAAAGTTATTGATTTTAATTTCACAATAGCTTCAAAACAAAGTAATCAAGACCTATTATTATTCAGCTGTTGTAACTAATTATCAATTGAAAAAAAAATGATGTCACTAAAATGAAAATATGCTTTAGAACACATTTAAATATTTAAAGAGATAAGTTTTTCTAATAAAATATTTTTGAAAACTTCATTGGAGTATTTTCAATAACAATAATAAAAAAAGATGTACTCACTTTATCTAATCTCTATCGTGTTAATTTTAAAAAATTGAATATAGCTCTATTTTATATAAAGTTACATATCTTTAAATCATTCGTATCAAAATAAAACTCTAAAATTTATGGTCATTAACTTTTTAAAAATGAAATTTATCAAAACGAGAGAGAATATATAGAATTCCTCAGATAAAGTTGGTGTTTATGTGTTTACATTGTATTTCTTTTTGGCATCAAGATCACATGTTTGATTAATAAAATGTAGGAAGGAGAAGCCATAATAGTAAAGACAAGGTTGAAGGATTTACTCTGATGCTCTTTCTCTTCTTTGGGAATCTTCAAAAAAAGAGGTGTAAAAATTATACAAAGGGGTGAGGCTTTTTCCAATGTAATATCCCTTTCTTCTTTTGGATAGATTCTTTAAATAACCTTTCTTTCTTTCCTCTTTTACACATTATCCACTTCTTTTTTTTTTT

mRNA sequence

AGAGTATTGGCTGATGTTCAAATATTGAAAATAACTACACCGGCAAGTTTCGACATAAAATCAAACTCACAATTATATAAAAATAATAATAATATATACCTTCCACTTGGTCATCATCCTCCCATGTCTTGAAAGCCATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACCCAACAAGCTTTCATTCTCTTTACGTGCACGGCGGTCGCGGTTGTTGGGTTCTGCGCGGCGGCGTGGGCGAAGAAGAGGAAGGGAGAGAAGGGAGAGAAGAAAGAGCGCCGAAGGACGACGGCAACGGAGAAGTGGTGGAAATGGGCGGCAGAAAGGCGGAAGGGGAGCGGCGGCGGAGAGACGCCGGTGCGGCTGTTGGGCAGAGAAGGGGAAGGGGAAGAATTGGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAACGGCCGATATTAATGGGGGAAAAGTGTGAGATGCTGAAATACAGTGGGCTTATTCTGTACGACGAAAGGGGACGATTGCTGCAGGAGCAAATCGCCGCCATGGAAAATGGTTACAAGGAAGGAGAAGCCATAATAGTAAAGACAAGGTTGAAGGATTTACTCTGATGCTCTTTCTCTTCTTTGGGAATCTTCAAAAAAAGAGGTGTAAAAATTATACAAAGGGGTGAGGCTTTTTCCAATGTAATATCCCTTTCTTCTTTTGGATAGATTCTTTAAATAACCTTTCTTTCTTTCCTCTTTTACACATTATCCACTTCTTTTTTTTTTT

Coding sequence (CDS)

ATGGAAGCTCTGTGGAATTTAGAAGACAAATGGAAGCTCTCAACCCAACAAGCTTTCATTCTCTTTACGTGCACGGCGGTCGCGGTTGTTGGGTTCTGCGCGGCGGCGTGGGCGAAGAAGAGGAAGGGAGAGAAGGGAGAGAAGAAAGAGCGCCGAAGGACGACGGCAACGGAGAAGTGGTGGAAATGGGCGGCAGAAAGGCGGAAGGGGAGCGGCGGCGGAGAGACGCCGGTGCGGCTGTTGGGCAGAGAAGGGGAAGGGGAAGAATTGGGAAGCCGGAATTCGACGGCGGCGGTGTGGCAACGGCCGATATTAATGGGGGAAAAGTGTGAGATGCTGAAATACAGTGGGCTTATTCTGTACGACGAAAGGGGACGATTGCTGCAGGAGCAAATCGCCGCCATGGAAAATGGTTACAAGGAAGGAGAAGCCATAATAGTAAAGACAAGGTTGAAGGATTTACTCTGA

Protein sequence

MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKWWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL

Homology

[Close]

BLAST of ClCG11G017140 vs. NCBI nr
Match: XP_038899822.1 (uncharacterized protein LOC120087050 isoform X2 [Benincasa hispida])

HSP 1 Score: 271.2 bits (692), Expect = 5.7e-69
Identity = 139/155 (89.68%), Postives = 143/155 (92.26%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKW 60
           MEALWNLEDKWKLSTQQAFIL TCTAVAVVG C AAWAKKR   +GEKK+ RR T T +W
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVVGICTAAWAKKR---RGEKKDHRRGT-TVRW 60

Query: 61  WKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLIL 120
           WKWAAERRKGSGGGETPVRLL  EGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLIL
Sbjct: 61  WKWAAERRKGSGGGETPVRLLSGEGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLIL 120

Query: 121 YDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL 156
           YDERGRLLQ+QIAAMENGYKEGEAIIVKTRLKDLL
Sbjct: 121 YDERGRLLQDQIAAMENGYKEGEAIIVKTRLKDLL 151

[Close]

BLAST of ClCG11G017140 vs. NCBI nr
Match: KGN55027.1 (hypothetical protein Csa_012520 [Cucumis sativus])

HSP 1 Score: 257.7 bits (657), Expect = 6.5e-65
Identity = 134/157 (85.35%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKW 60
           MEALWNLEDKWKLSTQQAF+L TCT  AV+G CAAAWAKKRKGEK  K   RRT   ++W
Sbjct: 1   MEALWNLEDKWKLSTQQAFVLLTCTVAAVIGLCAAAWAKKRKGEK--KAHPRRT--DQRW 60

Query: 61  WKWAA--ERRKGSGGGETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL 120
           WKW A   RRKGSGGGETPVRLLGRE EGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL
Sbjct: 61  WKWPATESRRKGSGGGETPVRLLGREEEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL 120

Query: 121 ILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL 156
           ILYDERGRLLQEQIAAMENGYKEGE I VKTRLKDLL
Sbjct: 121 ILYDERGRLLQEQIAAMENGYKEGEVIKVKTRLKDLL 153

[Close]

BLAST of ClCG11G017140 vs. NCBI nr
Match: XP_023534959.1 (uncharacterized protein LOC111796532 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.8 bits (652), Expect = 2.5e-64
Identity = 132/156 (84.62%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEK- 60
           MEALWNLEDKWKLSTQQAFIL TCTAVAV+GFCAAAWAK+R   K EK ERR+T A E+ 
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAAAWAKQR---KCEKTERRQTKAVERW 60

Query: 61  WWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           WWK AA+ RK SGGGETPVRLLG EGEGE+ GSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  WWKGAADTRKVSGGGETPVRLLGGEGEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL 156
           LYDERGRLLQ+QIAAMENGYK+G+ IIVKTRLKDLL
Sbjct: 121 LYDERGRLLQDQIAAMENGYKDGDGIIVKTRLKDLL 153

[Close]

BLAST of ClCG11G017140 vs. NCBI nr
Match: XP_022976857.1 (uncharacterized protein LOC111477103 isoform X2 [Cucurbita maxima])

HSP 1 Score: 251.9 bits (642), Expect = 3.6e-63
Identity = 131/156 (83.97%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEK- 60
           MEALWNLEDKWKLSTQQAFIL TCTAVAV+GFCAA WAK+R   K EK ERR+T ATE+ 
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAATWAKQR---KCEKTERRQTKATERW 60

Query: 61  WWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           WWK AA+RRK SGGGETPVRLLG  GEGE+ GSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  WWKGAADRRKVSGGGETPVRLLG--GEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL 156
           LYDERGRLLQ+QIAAMENGYK+G+ +IVKTRLKDLL
Sbjct: 121 LYDERGRLLQDQIAAMENGYKDGDGVIVKTRLKDLL 151

[Close]

BLAST of ClCG11G017140 vs. NCBI nr
Match: XP_008465611.1 (PREDICTED: uncharacterized protein LOC103503252 [Cucumis melo] >KAA0066703.1 uncharacterized protein E6C27_scaffold271G00360 [Cucumis melo var. makuwa] >TYK27853.1 uncharacterized protein E5676_scaffold384G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 1.4e-62
Identity = 132/157 (84.08%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKW 60
           MEALWNLEDKWKLSTQQAF+L TCT  AV+  CAAAWA+KRKGEK  K  RRRT   ++W
Sbjct: 1   MEALWNLEDKWKLSTQQAFVLLTCTLAAVIALCAAAWARKRKGEK--KAHRRRT--DQRW 60

Query: 61  WKWAAE-RRKGS-GGGETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL 120
           WKWAAE R KGS GGGETPVRLLG E EGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL
Sbjct: 61  WKWAAEIRWKGSGGGGETPVRLLGEEEEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL 120

Query: 121 ILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL 156
           ILYDERGRLLQ+QIAAMENGYKEGE I VKTRLKDLL
Sbjct: 121 ILYDERGRLLQDQIAAMENGYKEGEGIKVKTRLKDLL 153

[Close]

BLAST of ClCG11G017140 vs. ExPASy TrEMBL
Match: A0A0A0L376 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G622860 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.1e-65
Identity = 134/157 (85.35%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKW 60
           MEALWNLEDKWKLSTQQAF+L TCT  AV+G CAAAWAKKRKGEK  K   RRT   ++W
Sbjct: 1   MEALWNLEDKWKLSTQQAFVLLTCTVAAVIGLCAAAWAKKRKGEK--KAHPRRT--DQRW 60

Query: 61  WKWAA--ERRKGSGGGETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL 120
           WKW A   RRKGSGGGETPVRLLGRE EGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL
Sbjct: 61  WKWPATESRRKGSGGGETPVRLLGREEEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL 120

Query: 121 ILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL 156
           ILYDERGRLLQEQIAAMENGYKEGE I VKTRLKDLL
Sbjct: 121 ILYDERGRLLQEQIAAMENGYKEGEVIKVKTRLKDLL 153

[Close]

BLAST of ClCG11G017140 vs. ExPASy TrEMBL
Match: A0A6J1IGV7 (uncharacterized protein LOC111477103 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477103 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.7e-63
Identity = 131/156 (83.97%), Postives = 141/156 (90.38%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEK- 60
           MEALWNLEDKWKLSTQQAFIL TCTAVAV+GFCAA WAK+R   K EK ERR+T ATE+ 
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAATWAKQR---KCEKTERRQTKATERW 60

Query: 61  WWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           WWK AA+RRK SGGGETPVRLLG  GEGE+ GSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  WWKGAADRRKVSGGGETPVRLLG--GEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL 156
           LYDERGRLLQ+QIAAMENGYK+G+ +IVKTRLKDLL
Sbjct: 121 LYDERGRLLQDQIAAMENGYKDGDGVIVKTRLKDLL 151

[Close]

BLAST of ClCG11G017140 vs. ExPASy TrEMBL
Match: A0A5D3DW00 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00300 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.5e-63
Identity = 132/157 (84.08%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKW 60
           MEALWNLEDKWKLSTQQAF+L TCT  AV+  CAAAWA+KRKGEK  K  RRRT   ++W
Sbjct: 1   MEALWNLEDKWKLSTQQAFVLLTCTLAAVIALCAAAWARKRKGEK--KAHRRRT--DQRW 60

Query: 61  WKWAAE-RRKGS-GGGETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL 120
           WKWAAE R KGS GGGETPVRLLG E EGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL
Sbjct: 61  WKWAAEIRWKGSGGGGETPVRLLGEEEEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL 120

Query: 121 ILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL 156
           ILYDERGRLLQ+QIAAMENGYKEGE I VKTRLKDLL
Sbjct: 121 ILYDERGRLLQDQIAAMENGYKEGEGIKVKTRLKDLL 153

[Close]

BLAST of ClCG11G017140 vs. ExPASy TrEMBL
Match: A0A1S3CQQ9 (uncharacterized protein LOC103503252 OS=Cucumis melo OX=3656 GN=LOC103503252 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 6.5e-63
Identity = 132/157 (84.08%), Postives = 138/157 (87.90%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEKW 60
           MEALWNLEDKWKLSTQQAF+L TCT  AV+  CAAAWA+KRKGEK  K  RRRT   ++W
Sbjct: 1   MEALWNLEDKWKLSTQQAFVLLTCTLAAVIALCAAAWARKRKGEK--KAHRRRT--DQRW 60

Query: 61  WKWAAE-RRKGS-GGGETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL 120
           WKWAAE R KGS GGGETPVRLLG E EGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL
Sbjct: 61  WKWAAEIRWKGSGGGGETPVRLLGEEEEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGL 120

Query: 121 ILYDERGRLLQEQIAAMENGYKEGEAIIVKTRLKDLL 156
           ILYDERGRLLQ+QIAAMENGYKEGE I VKTRLKDLL
Sbjct: 121 ILYDERGRLLQDQIAAMENGYKEGEGIKVKTRLKDLL 153

[Close]

BLAST of ClCG11G017140 vs. ExPASy TrEMBL
Match: A0A6J1II18 (uncharacterized protein LOC111477103 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477103 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 9.1e-57
Identity = 120/141 (85.11%), Postives = 127/141 (90.07%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGEKGEKKERRRTTATEK- 60
           MEALWNLEDKWKLSTQQAFIL TCTAVAV+GFCAA WAK+R   K EK ERR+T ATE+ 
Sbjct: 1   MEALWNLEDKWKLSTQQAFILLTCTAVAVLGFCAATWAKQR---KCEKTERRQTKATERW 60

Query: 61  WWKWAAERRKGSGGGETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120
           WWK AA+RRK SGGGETPVRLLG  GEGE+ GSRNSTAAVWQRPILMGEKCEMLKYSGLI
Sbjct: 61  WWKGAADRRKVSGGGETPVRLLG--GEGEDFGSRNSTAAVWQRPILMGEKCEMLKYSGLI 120

Query: 121 LYDERGRLLQEQIAAMENGYK 141
           LYDERGRLLQ+QIAAMENGYK
Sbjct: 121 LYDERGRLLQDQIAAMENGYK 136

[Close]

BLAST of ClCG11G017140 vs. TAIR 10
Match: AT3G14760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.3 bits (186), Expect = 2.5e-14
Identity = 62/177 (35.03%), Postives = 88/177 (49.72%), Query Frame = 0


Query: 1   MEALWNLEDKWKLSTQQAFILFTCTAVAVVGFCAAAWAKKRKGE---------KGEKKER 60
           MEALW LE+K KL+T++A ++   TA AV   C AA    R              E    
Sbjct: 1   MEALWKLEEKLKLTTKEAVVILVGTAAAVTLLCIAAAFLNRNSRGKQVADAEWASETAFG 60

Query: 61  RRTTATEKWWKWAAERR--KGSGGGETPVRLLGREGEGE------ELGSRNSTAAVWQRP 120
            RT   ++  KW+  +R   GS    +  + +  E   +      +  S N+   VWQRP
Sbjct: 61  SRTMEEKRKCKWSKVKRTLMGSFCWSSAAKWMEMETRRQPPLLAVKERSLNAVDPVWQRP 120

Query: 121 ILMGEKCEMLKYSGLILYDERGR-----LLQEQIAAMENGYKEGEAIIVKTRLKDLL 156
           ILMGEKCE+ ++SGLILYDE G       LQE++          ++ +V+T L+DLL
Sbjct: 121 ILMGEKCELPRFSGLILYDECGHPRHHPQLQEKVK---------QSSVVRTTLRDLL 168

[Close]

BLAST of ClCG11G017140 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 5.6e-06
Identity = 21/32 (65.62%), Postives = 24/32 (75.00%), Query Frame = 0


Query: 99  VWQRPILMGEKCEMLKYSGLILYDERGRLLQE 131
           +WQR ILMG KCE L +SG+I YD  GRLL E
Sbjct: 107 LWQREILMGGKCEPLDFSGVIYYDSNGRLLNE 138

[Close]

BLAST of ClCG11G017140 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 3.6e-05
Identity = 33/80 (41.25%), Postives = 41/80 (51.25%), Query Frame = 0


Query: 54  TTATEKWWKWAAERRKGSGGG---ETPVRLLGREGEGEELGSRNSTAAVWQRPILMGEKC 113
           TT + K       + K   GG   +T V ++  E E EE G       VWQR ILMG KC
Sbjct: 93  TTLSNKAMTMVGRKNKAYDGGPTKKTAVEMVMEEDE-EEYG-------VWQREILMGGKC 152

Query: 114 EMLKYSGLILYDERGRLLQE 131
           E L YSG+I YD  G  L++
Sbjct: 153 EPLDYSGVIYYDCSGHQLKQ 164

The following BLAST results are available for this feature:

BLAST of ClCG11G017140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899822.1	5.7e-69	89.68	uncharacterized protein LOC120087050 isoform X2 [Benincasa hispida]	[more]
KGN55027.1	6.5e-65	85.35	hypothetical protein Csa_012520 [Cucumis sativus]	[more]
XP_023534959.1	2.5e-64	84.62	uncharacterized protein LOC111796532 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022976857.1	3.6e-63	83.97	uncharacterized protein LOC111477103 isoform X2 [Cucurbita maxima]	[more]
XP_008465611.1	1.4e-62	84.08	PREDICTED: uncharacterized protein LOC103503252 [Cucumis melo] >KAA0066703.1 unc...	[more]

BLAST of ClCG11G017140 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG11G017140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L376	3.1e-65	85.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G622860 PE=4 SV=1	[more]
A0A6J1IGV7	1.7e-63	83.97	uncharacterized protein LOC111477103 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3DW00	6.5e-63	84.08	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CQQ9	6.5e-63	84.08	uncharacterized protein LOC103503252 OS=Cucumis melo OX=3656 GN=LOC103503252 PE=...	[more]
A0A6J1II18	9.1e-57	85.11	uncharacterized protein LOC111477103 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of ClCG11G017140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G14760.1	2.5e-14	35.03	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G49000.1	5.6e-06	65.63	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G18560.1	3.6e-05	41.25	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..89
None	No IPR available	PANTHER	PTHR33237:SF21	TRANSMEMBRANE PROTEIN	coord: 1..155
None	No IPR available	PANTHER	PTHR33237	F2P16.13 PROTEIN-RELATED	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G017140.2	ClCG11G017140.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane