ClCG11G016560 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TCAGATTTCTTCGTTTTTCGTCAAAAGAAGATGAAATCCTGTTCATCGGAGAGAATCGGAGTTCGACAGTACAATAAATCGGAACTTCCGCGGCTGCGGTGGACGCCGGAGCTTCATCGGTACTTCGTTCAGACAGTCGAGATCCTTGGCGGAAGAAATCGTAAGTTCTATTTAGTTAAGCTTTTTGGTTCATTTCGCGTTCTCTGGACTGGAAGCAGAAATCATGAGAGAGAGAGAGTGCGCGCGCGCGCGCGTCCTTATTCGAATCTTTGATTTGCTTTTTTTCTGAAATCTGATTTGTTGCAGAAGCAACGCCGAAAAGAATCCTGCAAATGATGGGAGTGAAAGGACTGAAGATTTCACACATAAAGAGCCATTTACAGGTGCTTTTGATTTGAATTTTGATTTAACGCTAATTTTCATCGCTATGATTCGATTGAGATATTACATTTCCTCATCAATTCACCAAAAAAACTTCTCCGATTTTTGTTCTTATTTATTTTATTTATTTTTAGTTTGATGCGATGATCTGATCATGCTTGATTCAATATTTGGACGCGTTGAAGTGATTCCAAAATATATACGAAAAACGAATTAACTCTTTCTTGATTAGGTTTTGGTTCACAATTTTGAGTTTGTAATTCGTATAAACTTGTTAGAGTCTCCTGAATCTCATAAACCTACCACCAAACAAATTTAAAGATCCTTTGAATAAACACATTTTTATACTCGATTTACACAAACAAACATGTTTTGTTAAGTAAATTTGAGTTTTAACACATAAACTCAAATATAGTGAAATTAATGAGCCAAAACATGATCTGTAATTAAAAGCTTTTCATAGCCGAAAAAGATAAATTACGAATATATAAAATTAACGAGAAATTTATTCAAATATTGGAATCAGGCAGTGTAGATAGACTCTTCTCTCTCTCTAAATGTGAAAATGGTATTAAGCCAAACAGATAAGATGAAAAGAATGGTAATAGCTTCCTTAGGGTAGGATTAGGACATTGGTTTTAATTAAATAAAACTTTTTAGAAATTAAAATAAAGAGTTAAGTTTTGGTTAGGTAAATTCCATACACCGGGACAGAAAAGTAGCCAATTTAATTCAATTAAATATGAAATTAAAGACAAAGAATTAGAATAATTATGAGTTCTTGCATGGCGACGCTACTCTTTTTTTTAATCATTACTTGTAAATATCCATTATTATATATATATATATATATATATATAAATTACAAGTTTGCTCTCTCTAGTTTGGAGAAAGAATTTTATTCCAATAATTTTAAGACTAATGGGTTATATGGCAAAACTTTTGAAAAAATTCAAAGTATAGCAAAATATCACTGTTTATCAACGATAAACACTAATAGACATCTGTCTGTATCTATCACTAATAGACAATAATAGATTATAGTAGTATCAAAGTCTATCATTGTCTATCACTAATAGATAATCCATATTTTGCTATATTTGTAAATATTTTGACTCATTTTGCTATATTTAAAAACATCCTTAATTTTAATTAAAATTAAAATTTAGTCCTTACGAAAATTTGGTCAACCTTGAGGGTTAAATTTTAATTATAAACTATAGATCATAAATTTTAGCTTTTTAGATAATAGAAATTAAATTATTAATTTTATTTAAAAAGGGAAGGGTTATTATTTGGTATTATTTTTATTTTTATTTAATATTTATTTATTTTGTGTAGATGTACAGAAGTATTAAATTAGAGAATGAAAGTAAGTTCGAGGATGTAGTCATGAGACAAGGCGTGAAGCAGAAAAGAAGAAGAACATTGCACTCTTCTGATATCAAAACTTCAGTCTCCTCTTCAAGTGGGTATGTTCATCAATTTTCTTTCATGTTCTCATATACCACCGTTATTGTATAATTTCTTTATAAAATTATAAATCTTTTCATCAATTTTGTTTTTAGTGTTTAAAAATTAAATTATTTCTATGTTTTATTATCAACCTTATACCAATATTTTAAAAAACTAATGTTTCTTAAAAAAAAAATGAAAAACATAATAAAGAAATAGAAATGACACAACATTTAAAAGCATAAAACTAAAGCAAATGATTGAGCCTCATTTGGTAACCATTTAGTTGGTTTTTAGTTTTTTTAAAAATTAAGTCTACACATCTTTTCCACTTATAAATTTCTTTATTTCATTATTTACTTTCTATCAATATATTCAAAAAAAAAAAAAATTGTTTCTTTCTATATATGTTTCTTTTTTTCTACATTTTAGAGATATTTTCAAAATGCAATATAATTTTTCAAAACTATATATATATATATATATATATATATATAATAAAATAATCTTGTATTCTTTAAAAAAAAATCTGACTCTAAATTTAAATAGTTATATGAATGGTAGTATTTTGTAAGTATTTTTAAAAACTTAATACTTAGGAAGGTTGAAGACCGTTATATATTATCTACCATGCATGGCCTCGAAATTCGAATGCATCTATAACATATTTTTGTAATTTTCTTAGAAAAATAAATTAAACGTATAAATTAACTGAGAAATGCAAACAGTTTTTTTTTTAATAGAAAAAATAAGAGCAATGATTAAGGATTAAGTGTAGTCACCTAGTTTGTTTCTTTTTATACAAATAAATAAATAAATTTTTAATTATCCTTTTAAAAAATACTAATGGCTACATGACAATTGGATGTAGTAAGGGCTGCACAATAAATTGGTGGTCTTATACCCAATTTTTTCTAAAAAAATAATAATAATTCCAATCTTTGCCCTTTCAAGAGGAAAAAACAAAGCATGATTAACATAAATTAAATTAAAAAAAAAAATACTATCCATAAAGGTAAGTGTTGGTATGTTCGAATGCATAACAAAATTAAATCTTGGTTAACTAATTAATGTAAATTTTTTGTCACCATAAATTGTCTAATTTTTATGTCACAATTTTATGCAATGGGTAAAATTTAAAATATAAGTCAAAGTGAATTTGGGTTAGTGGTATTGGTATGTGCTTTGTCTCTAGAGGTTAGAAATTCAATCTCCCACCCTGCAATTGTTGTAGTAAACAAAAAAAAATTAAATATAACATTTAACAGTCATGCTAAAAATATAAAGTTTCGAAGTTTAATTAGAGGGCATGAGTTATGAGATTTAGATCAAAATATAATTTAATTTCCCTAATTTTTATTTATAAGGGTTTGAAAATCAAAATATTAATTTAAATTATGCATATAATACTTATGAGTATATATTTTAACTGATATTTATATAATATGACATGTTGATTATGTAACGTTTGAAAGATCTATCTTTTTAATTGAAAAAAAAAAAAGATAATTAATGGTTTTACAAAATTATGATTTTAACATATTTAAATATATTTTATCAAAAGAAATAATTAATTATGTAATATATTTTAGTTTCCATCTCCTTAAAGCTAATTTAATAAAGAATAAATAAAGTATGACCAAAAAATTCTAAATTGTACAACACTCCCCATCCAATATTTTGCAGGATATTGAGAGAAGAAGAAGAGTTCAACAGAAGTAATAGAAAACACAAGTCTTCATCCAACATAAAAGACAGAACTATTTCTCAACAGGTAACTAATGCTCCAAAACATTTAAAATTATGATATCCAATTTATAGTCAATCTTATCCAACACATGTGTTAACATTTTTTTTTTCTCATTTTTAAAATATACCTGATATTTTAGCAATTTATTTGGCTTTTCTAACATACCTTTAACAACATTTTTATCGATATCTAGAAACAAACATGGAAAGATTAAGACTAATTATAATATTATGGGCATTGAATTGGTTTCAAACATCTTTCCCTATATATTTAAGAAGTATGCTCGCTTCAAAGTGGAGTAACAAAAATACTGTAGAATTTAATTAATAGTCTATGAAAGTGGGATGGTTATCCGTGTATGATTTGGTGGCACTGTAGTTTGAAACCATAGTTGAACCAAATGTTAAAATAGAAAGCAATACTAATTAATCTACAAAGTTGTTGAAGTATTCATATAAGCCTTCCCTACTCAAAATCCATCTAGAAATCACCAGTCCCATCTTTTACAAATGATTTTTTTTTTTTTGTTTTTGACAAGTTATGCAATTAAGATTTGAATTCTTTGGAGACGGAAAGTTGATTTGTGTTGAGAAACTTAAGTCCTGTTTAGATGGACTACAAAAATATTTTTCAAAAAAATCATTTTTGTTTAAATTTTTTTTAATAAATATTGTTTAAAATACACTTTAAAAGTATTTCAAAAGCTATTTTAAATGAGGGTCAAATACTTTAATTCTTTCTAAATTGACTTATTTTTAAAATTAAACACTTGAAAATTTAAACCAAATACACCCTTGTTAACACCGGTTAGCTTCACATTTGTAAAAAATGTGGCAACATTTTTCTAATATAATTTAAGCCTAGGAAGGAATTCGAGACTCGTTTGAAAATTGTTTGGGATATTATAATCAATTTATTGTAGATTATTGGTGGCTACACCTATGAAATTTCCTTTCACTTGAATGTGTATTTTTTATTAATTCCCATCTTTGAAGCGATATTTGAAATCAAGCTAATGCTTTTGCCATGAGCTATGAAAAACTGTATTTTCCCTTCCCTCAAGATTTGAATGAATTTTAAGTCATAAATTTCGTTGTTGTTGTTGCAAGAAAGAGAATGAATTTAAAATCCAAAATTATTTCAAATTATGTTTTTACTTCAAAAAACTTTCTTGACTATACTGTTTGGATTTTGAAAGATTTCATAGAATTTTTTAATGCAACCTAATCATATTCTAATTTTATATTAGTAAATTCTTAATTTTATTTTCTTTTTAGGTTACCATCCAACCACAAAACTTTAATAAATATATTCATTTCAAAACTTGCTCACCTAATTGATGATTACTATTTCAGAATTTAAAATTGAATTGTAGATAATTGTCCTAGGGAAACAAAGAACACATAATTTCCAAATGACAGCAAAGGAACTAACCTCATACATAGAGTTCAGAATTGCCCAAAATACTTGGTTGAACAAAGAAAGAATAAGCAAAATTTGTAATTTCATTTTTGTAGGATTCAGATTCAAATTCAAATTCAAATTCAGATTCAGAGGAGGAATGCATTGGTGGGTCAATGTTAGAAGACCAAACATGTGATTGTGAACTCACATTGTCCCTCAAACCTTCAATGACACAACAAATTCTAGAGAGACAGTTAAGTGAACAAGATAACAACAGCTCTTCCAATTCTATCCCCATTTCCCAACTCAATTTTGTACAGCTGAAAGAATTCTCCCATCCTCAGCACCATATCAATTTGGACCTAACCATATGA TCAGATTTCTTCGTTTTTCGTCAAAAGAAGATGAAATCCTGTTCATCGGAGAGAATCGGAGTTCGACAGTACAATAAATCGGAACTTCCGCGGCTGCGGTGGACGCCGGAGCTTCATCGGTACTTCGTTCAGACAGTCGAGATCCTTGGCGGAAGAAATCAAGCAACGCCGAAAAGAATCCTGCAAATGATGGGAGTGAAAGGACTGAAGATTTCACACATAAAGAGCCATTTACAGATGTACAGAAGTATTAAATTAGAGAATGAAAGTAAGTTCGAGGATGTAGTCATGAGACAAGGCGTGAAGCAGAAAAGAAGAAGAACATTGCACTCTTCTGATATCAAAACTTCAGTCTCCTCTTCAAGTGGGATATTGAGAGAAGAAGAAGAGTTCAACAGAAGTAATAGAAAACACAAGTCTTCATCCAACATAAAAGACAGAACTATTTCTCAACAGGATTCAGATTCAAATTCAAATTCAAATTCAGATTCAGAGGAGGAATGCATTGGTGGGTCAATGTTAGAAGACCAAACATGTGATTGTGAACTCACATTGTCCCTCAAACCTTCAATGACACAACAAATTCTAGAGAGACAGTTAAGTGAACAAGATAACAACAGCTCTTCCAATTCTATCCCCATTTCCCAACTCAATTTTGTACAGCTGAAAGAATTCTCCCATCCTCAGCACCATATCAATTTGGACCTAACCATATGA TCAGATTTCTTCGTTTTTCGTCAAAAGAAGATGAAATCCTGTTCATCGGAGAGAATCGGAGTTCGACAGTACAATAAATCGGAACTTCCGCGGCTGCGGTGGACGCCGGAGCTTCATCGGTACTTCGTTCAGACAGTCGAGATCCTTGGCGGAAGAAATCAAGCAACGCCGAAAAGAATCCTGCAAATGATGGGAGTGAAAGGACTGAAGATTTCACACATAAAGAGCCATTTACAGATGTACAGAAGTATTAAATTAGAGAATGAAAGTAAGTTCGAGGATGTAGTCATGAGACAAGGCGTGAAGCAGAAAAGAAGAAGAACATTGCACTCTTCTGATATCAAAACTTCAGTCTCCTCTTCAAGTGGGATATTGAGAGAAGAAGAAGAGTTCAACAGAAGTAATAGAAAACACAAGTCTTCATCCAACATAAAAGACAGAACTATTTCTCAACAGGATTCAGATTCAAATTCAAATTCAAATTCAGATTCAGAGGAGGAATGCATTGGTGGGTCAATGTTAGAAGACCAAACATGTGATTGTGAACTCACATTGTCCCTCAAACCTTCAATGACACAACAAATTCTAGAGAGACAGTTAAGTGAACAAGATAACAACAGCTCTTCCAATTCTATCCCCATTTCCCAACTCAATTTTGTACAGCTGAAAGAATTCTCCCATCCTCAGCACCATATCAATTTGGACCTAACCATATGA SDFFVFRQKKMKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQMYRSIKLENESKFEDVVMRQGVKQKRRRTLHSSDIKTSVSSSSGILREEEEFNRSNRKHKSSSNIKDRTISQQDSDSNSNSNSDSEEECIGGSMLEDQTCDCELTLSLKPSMTQQILERQLSEQDNNSSSNSIPISQLNFVQLKEFSHPQHHINLDLTI Homology
BLAST of ClCG11G016560 vs. NCBI nr
Match: XP_038899444.1 (myb family transcription factor MPH1-like [Benincasa hispida]) HSP 1 Score: 371.3 bits (952), Expect = 6.2e-99 Identity = 206/231 (89.18%), Postives = 211/231 (91.34%), Query Frame = 0
BLAST of ClCG11G016560 vs. NCBI nr
Match: XP_008466796.1 (PREDICTED: putative Myb family transcription factor At1g14600 [Cucumis melo]) HSP 1 Score: 338.6 bits (867), Expect = 4.4e-89 Identity = 192/235 (81.70%), Postives = 205/235 (87.23%), Query Frame = 0
BLAST of ClCG11G016560 vs. NCBI nr
Match: XP_011653983.1 (myb family transcription factor PHL12 [Cucumis sativus] >KGN54943.1 hypothetical protein Csa_012635 [Cucumis sativus]) HSP 1 Score: 322.8 bits (826), Expect = 2.5e-84 Identity = 185/240 (77.08%), Postives = 204/240 (85.00%), Query Frame = 0
BLAST of ClCG11G016560 vs. NCBI nr
Match: XP_023525384.1 (probable transcription factor KAN3 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 297.4 bits (760), Expect = 1.1e-76 Identity = 174/235 (74.04%), Postives = 192/235 (81.70%), Query Frame = 0
BLAST of ClCG11G016560 vs. NCBI nr
Match: XP_022982449.1 (probable transcription factor KAN3 [Cucurbita maxima]) HSP 1 Score: 297.0 bits (759), Expect = 1.5e-76 Identity = 174/235 (74.04%), Postives = 192/235 (81.70%), Query Frame = 0
BLAST of ClCG11G016560 vs. ExPASy Swiss-Prot
Match: A0A0P0X0C0 (Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN=MPH1 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 6.8e-24 Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of ClCG11G016560 vs. ExPASy Swiss-Prot
Match: A3AWH5 (Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOF1 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 2.3e-19 Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 0
BLAST of ClCG11G016560 vs. ExPASy Swiss-Prot
Match: Q700D9 (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2) HSP 1 Score: 94.4 bits (233), Expect = 1.9e-18 Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 0
BLAST of ClCG11G016560 vs. ExPASy Swiss-Prot
Match: Q9C616 (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.1e-13 Identity = 33/61 (54.10%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of ClCG11G016560 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 78.2 bits (191), Expect = 1.4e-13 Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of ClCG11G016560 vs. ExPASy TrEMBL
Match: A0A1S3CS11 (putative Myb family transcription factor At1g14600 OS=Cucumis melo OX=3656 GN=LOC103504120 PE=4 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 2.1e-89 Identity = 192/235 (81.70%), Postives = 205/235 (87.23%), Query Frame = 0
BLAST of ClCG11G016560 vs. ExPASy TrEMBL
Match: A0A0A0KZQ0 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G614170 PE=4 SV=1) HSP 1 Score: 322.8 bits (826), Expect = 1.2e-84 Identity = 185/240 (77.08%), Postives = 204/240 (85.00%), Query Frame = 0
BLAST of ClCG11G016560 vs. ExPASy TrEMBL
Match: A0A6J1J4K7 (probable transcription factor KAN3 OS=Cucurbita maxima OX=3661 GN=LOC111481270 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 7.2e-77 Identity = 174/235 (74.04%), Postives = 192/235 (81.70%), Query Frame = 0
BLAST of ClCG11G016560 vs. ExPASy TrEMBL
Match: A0A6J1FNB8 (probable transcription factor KAN4 OS=Cucurbita moschata OX=3662 GN=LOC111445813 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 1.9e-74 Identity = 173/235 (73.62%), Postives = 190/235 (80.85%), Query Frame = 0
BLAST of ClCG11G016560 vs. ExPASy TrEMBL
Match: A0A6J1IGV1 (putative Myb family transcription factor At1g14600 OS=Cucurbita maxima OX=3661 GN=LOC111477099 PE=4 SV=1) HSP 1 Score: 281.6 bits (719), Expect = 3.1e-72 Identity = 171/237 (72.15%), Postives = 186/237 (78.48%), Query Frame = 0
BLAST of ClCG11G016560 vs. TAIR 10
Match: AT2G02060.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 97.4 bits (241), Expect = 1.6e-20 Identity = 49/85 (57.65%), Postives = 62/85 (72.94%), Query Frame = 0
BLAST of ClCG11G016560 vs. TAIR 10
Match: AT2G42660.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 96.7 bits (239), Expect = 2.7e-20 Identity = 45/71 (63.38%), Postives = 58/71 (81.69%), Query Frame = 0
BLAST of ClCG11G016560 vs. TAIR 10
Match: AT2G40260.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 96.3 bits (238), Expect = 3.6e-20 Identity = 45/71 (63.38%), Postives = 57/71 (80.28%), Query Frame = 0
BLAST of ClCG11G016560 vs. TAIR 10
Match: AT2G38300.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 95.9 bits (237), Expect = 4.7e-20 Identity = 43/77 (55.84%), Postives = 61/77 (79.22%), Query Frame = 0
BLAST of ClCG11G016560 vs. TAIR 10
Match: AT1G14600.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 94.4 bits (233), Expect = 1.4e-19 Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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