ClCG11G016170 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G016170
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Pentatricopeptide repeat-containing protein
Location	CG_Chr11: 29446669 .. 29448500 (+)
RNA-Seq Expression	ClCG11G016170
Synteny	ClCG11G016170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAACACAGTGGCATCTTCTTCCCCAATACAATACATGCCAGCTCACTCTCCTGGGGTTCAAGGGAACCTCTTGTACGTTCCATCTGTCAGGATCTCTTGTACGTTCAGTTCCTTCGTCTCTGCAAATTCAACTAGCTACCCTCGTTTTAGAGTTCCAAAAGTCCAGACGAAGCTTTTCAAAGCGGAGGTTTTCACACCTACTTGTAAACTCCACACCTTTTCGCGCCTAAAAATCTCTCTTACCAATCGAGATCGTTAAAAGAGGAAAAGTTACGATCGATCGTCTGAGTCCAAATGGTTTCTTCTTGGTTTAACAATTGTGGATTTTATCAAGTAGTTTGAAGTGATGAATGGTGGAAGGCCATGGCTGAAAACCCTAAAATGGGTGTAAAAAACCCTTCGGAAATTCCCCCCAGTCCTTCGCCGCCGTCCGCCAAATCCCCACGCTTCCCATCGAATCTCGACTTGCCCGACATATCACCGGCTGCTAAAACCGTTTGCGAAGTCCTGGTCAGAACCTCGAGGAACGATGTAGATGCCGCGCTGTCCGCGACGGGAGTGGCTCCGTCGCCAGAGCTTGTCCAAGAAGTTCTAAGGGCTTCTTATAACTATCCGTCGTCGGCGATCAAGTTCTTCCGGTGGGCGAGGCAGTCGGCGAAGCAGTCGGCGTACTCATGGAATCTGATGATTGATTTGTTGGGCAAGAACGAACTTTTCGATGAAATGTGGAACGGCATTCGCACGATGAGGCAAGAAAAGATCATTTCATTGCCAACTTTCGTGTCCGTTTTTGGGAGCTATTGTTCTGCTGGCAGGTTCAAAGAAGCGATGATGAGCTTTGAAGTGATGGATAGGTACGAAGTTGAGAAGAATGTCATGGCAGTGAATTCTCTACTGAGTGCAATTTGTACAGAGGAAAATCAAACATCAAAGGCTTGGGAGTTCTTTGAGAAGCATAAAGAGAAGATTCCTTTGGATGAGGACTCATTCGCCATTTTATTGGAAGGTTGGGAGAAAGAAGGCAATGTGGAGAAAGCCGAGGTTACATTTAGTGAAATGGTGAAAAGGGTCGGCTGGAATCCTGAAAATGTTTCATCTTATGATGCATTTTTAATAACATTGGTTCGTGGGGGCCGATCTGAAGAGGCAATCAATGTTCTTCTAGAAATGAAGAAGAATGGTTGTTTGCCAGGTTTGAAATTTCTGTCCAATGCTCTTGATAGTCTCATTCAGCAAAATGATGCAAACCATGCGATTCTATTGTGGGATATAGTTGTGGCAAGTGGATTAGTTCCTAACTTGATTATGTACAATGCCATAATTGGACTGCTAAGCGAGAAGAGTAAGATCGAAGACGCATTTCGGCTCTTGGATGCCATGGTTTTCCATGGTGCTTTTCCCAACTCCTTAACTTACAACCTGATCTTCAGCTGTTTGATCAAGAATAAGAAAGTTAAGGAAGCAAGTCAATTTTTCAGGGAGATGGTAAAGAATGAGTGCCCTCCTACCCCTTCTAATTGTGCTGCAGCTATCACAATGTTGTTTGATGGTTATGACCCTGAAACGGCCATTGATATATGGAACTACATGGTCGAGAATCACATCAAGCCTATGGATGCAAGTGCAAATGCACTGCTCATTGGCCTCTGCAATTTGGATCGGTTAAAAGAGGTTAGGAGCTTCGCCGACGACATGCTTGATCGACAAATCGGAATAATGGAATCAACTATGAAGGTCTTGAAGCATGGTTTCTATGAGCAGAGGGGAAGTTTCAGAGAGAATTATGATAGTCTTTTGCGTAGGTGGAGAGCTTCCTCAATTTTGTAG

mRNA sequence

ATGGACAACACAGTGGCATCTTCTTCCCCAATACAATACATGCCAGCTCACTCTCCTGGGGTTCAAGGGAACCTCTTGTACGTTCCATCTGTCAGGATCTCTTGTACGTTCAGTTCCTTCGTCTCTGCAAATTCAACTAGCTACCCTCGTTTTAGAGTTCCAAAAGTCCAGACGAAGCTTTTCAAAGCGGAGGCCATGGCTGAAAACCCTAAAATGGGTGTAAAAAACCCTTCGGAAATTCCCCCCAGTCCTTCGCCGCCGTCCGCCAAATCCCCACGCTTCCCATCGAATCTCGACTTGCCCGACATATCACCGGCTGCTAAAACCGTTTGCGAAGTCCTGGTCAGAACCTCGAGGAACGATGTAGATGCCGCGCTGTCCGCGACGGGAGTGGCTCCGTCGCCAGAGCTTGTCCAAGAAGTTCTAAGGGCTTCTTATAACTATCCGTCGTCGGCGATCAAGTTCTTCCGGTGGGCGAGGCAGTCGGCGAAGCAGTCGGCGTACTCATGGAATCTGATGATTGATTTGTTGGGCAAGAACGAACTTTTCGATGAAATGTGGAACGGCATTCGCACGATGAGGCAAGAAAAGATCATTTCATTGCCAACTTTCGTGTCCGTTTTTGGGAGCTATTGTTCTGCTGGCAGGTTCAAAGAAGCGATGATGAGCTTTGAAGTGATGGATAGGTACGAAGTTGAGAAGAATGTCATGGCAGTGAATTCTCTACTGAGTGCAATTTGTACAGAGGAAAATCAAACATCAAAGGCTTGGGAGTTCTTTGAGAAGCATAAAGAGAAGATTCCTTTGGATGAGGACTCATTCGCCATTTTATTGGAAGGTTGGGAGAAAGAAGGCAATGTGGAGAAAGCCGAGGTTACATTTAGTGAAATGGTGAAAAGGGTCGGCTGGAATCCTGAAAATGTTTCATCTTATGATGCATTTTTAATAACATTGGTTCGTGGGGGCCGATCTGAAGAGGCAATCAATGTTCTTCTAGAAATGAAGAAGAATGGTTGTTTGCCAGGTTTGAAATTTCTGTCCAATGCTCTTGATAGTCTCATTCAGCAAAATGATGCAAACCATGCGATTCTATTGTGGGATATAGTTGTGGCAAGTGGATTAGTTCCTAACTTGATTATGTACAATGCCATAATTGGACTGCTAAGCGAGAAGAGTAAGATCGAAGACGCATTTCGGCTCTTGGATGCCATGGTTTTCCATGGTGCTTTTCCCAACTCCTTAACTTACAACCTGATCTTCAGCTGTTTGATCAAGAATAAGAAAGTTAAGGAAGCAAGTCAATTTTTCAGGGAGATGGTAAAGAATGAGTGCCCTCCTACCCCTTCTAATTGTGCTGCAGCTATCACAATGTTGTTTGATGGTTATGACCCTGAAACGGCCATTGATATATGGAACTACATGGTCGAGAATCACATCAAGCCTATGGATGCAAGTGCAAATGCACTGCTCATTGGCCTCTGCAATTTGGATCGGTTAAAAGAGGTTAGGAGCTTCGCCGACGACATGCTTGATCGACAAATCGGAATAATGGAATCAACTATGAAGGTCTTGAAGCATGGTTTCTATGAGCAGAGGGGAAGTTTCAGAGAGAATTATGATAGTCTTTTGCGTAGGTGGAGAGCTTCCTCAATTTTGTAG

Coding sequence (CDS)

ATGGACAACACAGTGGCATCTTCTTCCCCAATACAATACATGCCAGCTCACTCTCCTGGGGTTCAAGGGAACCTCTTGTACGTTCCATCTGTCAGGATCTCTTGTACGTTCAGTTCCTTCGTCTCTGCAAATTCAACTAGCTACCCTCGTTTTAGAGTTCCAAAAGTCCAGACGAAGCTTTTCAAAGCGGAGGCCATGGCTGAAAACCCTAAAATGGGTGTAAAAAACCCTTCGGAAATTCCCCCCAGTCCTTCGCCGCCGTCCGCCAAATCCCCACGCTTCCCATCGAATCTCGACTTGCCCGACATATCACCGGCTGCTAAAACCGTTTGCGAAGTCCTGGTCAGAACCTCGAGGAACGATGTAGATGCCGCGCTGTCCGCGACGGGAGTGGCTCCGTCGCCAGAGCTTGTCCAAGAAGTTCTAAGGGCTTCTTATAACTATCCGTCGTCGGCGATCAAGTTCTTCCGGTGGGCGAGGCAGTCGGCGAAGCAGTCGGCGTACTCATGGAATCTGATGATTGATTTGTTGGGCAAGAACGAACTTTTCGATGAAATGTGGAACGGCATTCGCACGATGAGGCAAGAAAAGATCATTTCATTGCCAACTTTCGTGTCCGTTTTTGGGAGCTATTGTTCTGCTGGCAGGTTCAAAGAAGCGATGATGAGCTTTGAAGTGATGGATAGGTACGAAGTTGAGAAGAATGTCATGGCAGTGAATTCTCTACTGAGTGCAATTTGTACAGAGGAAAATCAAACATCAAAGGCTTGGGAGTTCTTTGAGAAGCATAAAGAGAAGATTCCTTTGGATGAGGACTCATTCGCCATTTTATTGGAAGGTTGGGAGAAAGAAGGCAATGTGGAGAAAGCCGAGGTTACATTTAGTGAAATGGTGAAAAGGGTCGGCTGGAATCCTGAAAATGTTTCATCTTATGATGCATTTTTAATAACATTGGTTCGTGGGGGCCGATCTGAAGAGGCAATCAATGTTCTTCTAGAAATGAAGAAGAATGGTTGTTTGCCAGGTTTGAAATTTCTGTCCAATGCTCTTGATAGTCTCATTCAGCAAAATGATGCAAACCATGCGATTCTATTGTGGGATATAGTTGTGGCAAGTGGATTAGTTCCTAACTTGATTATGTACAATGCCATAATTGGACTGCTAAGCGAGAAGAGTAAGATCGAAGACGCATTTCGGCTCTTGGATGCCATGGTTTTCCATGGTGCTTTTCCCAACTCCTTAACTTACAACCTGATCTTCAGCTGTTTGATCAAGAATAAGAAAGTTAAGGAAGCAAGTCAATTTTTCAGGGAGATGGTAAAGAATGAGTGCCCTCCTACCCCTTCTAATTGTGCTGCAGCTATCACAATGTTGTTTGATGGTTATGACCCTGAAACGGCCATTGATATATGGAACTACATGGTCGAGAATCACATCAAGCCTATGGATGCAAGTGCAAATGCACTGCTCATTGGCCTCTGCAATTTGGATCGGTTAAAAGAGGTTAGGAGCTTCGCCGACGACATGCTTGATCGACAAATCGGAATAATGGAATCAACTATGAAGGTCTTGAAGCATGGTTTCTATGAGCAGAGGGGAAGTTTCAGAGAGAATTATGATAGTCTTTTGCGTAGGTGGAGAGCTTCCTCAATTTTGTAG

Protein sequence

MDNTVASSSPIQYMPAHSPGVQGNLLYVPSVRISCTFSSFVSANSTSYPRFRVPKVQTKLFKAEAMAENPKMGVKNPSEIPPSPSPPSAKSPRFPSNLDLPDISPAAKTVCEVLVRTSRNDVDAALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWARQSAKQSAYSWNLMIDLLGKNELFDEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSFEVMDRYEVEKNVMAVNSLLSAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKEGNVEKAEVTFSEMVKRVGWNPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLKFLSNALDSLIQQNDANHAILLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAMVFHGAFPNSLTYNLIFSCLIKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMVENHIKPMDASANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVLKHGFYEQRGSFRENYDSLLRRWRASSIL

Homology

[Close]

BLAST of ClCG11G016170 vs. NCBI nr
Match: XP_038900068.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 897.1 bits (2317), Expect = 7.5e-257
Identity = 450/489 (92.02%), Postives = 466/489 (95.30%), Query Frame = 0


Query: 64  EAMAENPKMGVKNPSEIPPSPSPPSAKSPRFPSNLDLPDISPAAKTVCEVLVRTSRNDVD 123
           EAMAENPKMGVKNPS+IP S SP S KSPRFP +LDL DISPAAKT+CEVLVR SRNDVD
Sbjct: 3   EAMAENPKMGVKNPSKIPTSSSPASPKSPRFPLHLDLLDISPAAKTICEVLVRVSRNDVD 62

Query: 124 AALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWARQSAKQSAYSWNLMIDLLGKNELF 183
           AALSATGVAPSPELVQEVLR SYN+PSSAIKFFRWARQ AKQSAYSWNLMIDLLGKNELF
Sbjct: 63  AALSATGVAPSPELVQEVLRVSYNHPSSAIKFFRWARQLAKQSAYSWNLMIDLLGKNELF 122

Query: 184 DEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSFEVMDRYEVEKNVMAVNSLL 243
           +EMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSFEVMDRYEVEK+V+AVNSLL
Sbjct: 123 EEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSFEVMDRYEVEKDVVAVNSLL 182

Query: 244 SAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKEGNVEKAEVTFSEMVKRVGW 303
           SAICTEENQTSKAWEFFEK+KEKIPLD DSFAILLEGWEKEGNVEKAEV F EMVKR+GW
Sbjct: 183 SAICTEENQTSKAWEFFEKYKEKIPLDGDSFAILLEGWEKEGNVEKAEVAFGEMVKRIGW 242

Query: 304 NPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLKFLSNALDSLIQQNDANHAI 363
           NPENVSSYDAFL TLVRGGRSEEAI VLLEMKKNGCLPGLKFLSNALDSLIQQNDANHAI
Sbjct: 243 NPENVSSYDAFLTTLVRGGRSEEAIKVLLEMKKNGCLPGLKFLSNALDSLIQQNDANHAI 302

Query: 364 LLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAMVFHGAFPNSLTYNLIFSCL 423
           LLWDIVV SGLVPNLIMYNAIIGLLSEKSKI+D+FRL DAMVFHGAFPNS TYNLIFSCL
Sbjct: 303 LLWDIVVGSGLVPNLIMYNAIIGLLSEKSKIKDSFRLFDAMVFHGAFPNSSTYNLIFSCL 362

Query: 424 IKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMVENHIKPMD 483
           IKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMVENHIKPMD
Sbjct: 363 IKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMVENHIKPMD 422

Query: 484 ASANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVLKHGFYEQRGSFRENYDSLL 543
           ASANALLIGLCNLDRL EV+SFA DMLDR+IGI+ESTMK LK+ FY+QRG  RENYDSLL
Sbjct: 423 ASANALLIGLCNLDRLTEVKSFAYDMLDRRIGILESTMKFLKNSFYQQRGGLRENYDSLL 482

Query: 544 RRWRASSIL 553
           RRWRASSIL
Sbjct: 483 RRWRASSIL 491

[Close]

BLAST of ClCG11G016170 vs. NCBI nr
Match: KAA0052256.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK01821.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 879.8 bits (2272), Expect = 1.2e-251
Identity = 435/487 (89.32%), Postives = 464/487 (95.28%), Query Frame = 0


Query: 66  MAENPKMGVKNPSEIPPSPSPPSAKSPRFPSNLDLPDISPAAKTVCEVLVRTSRNDVDAA 125
           MAENPKMGV+NPS+IPPS +P S  SPRFPS+LDLPDISPAAKT+CEVL++  RN+VDAA
Sbjct: 1   MAENPKMGVRNPSKIPPSSAPRSPNSPRFPSHLDLPDISPAAKTICEVLIKVPRNEVDAA 60

Query: 126 LSATGVAPSPELVQEVLRASYNYPSSAIKFFRWARQSAKQSAYSWNLMIDLLGKNELFDE 185
           LSATG+APSPELVQEVLR SYNYPSSAIKFFRWARQ AKQSAYSWNLMIDLLGKNELF+E
Sbjct: 61  LSATGLAPSPELVQEVLRVSYNYPSSAIKFFRWARQLAKQSAYSWNLMIDLLGKNELFEE 120

Query: 186 MWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSFEVMDRYEVEKNVMAVNSLLSA 245
           MWNGIRTMRQEKI+SLPTFVSVFGSYCSAGRFKEA MSFEVMDRYEVEK+V+AVNSLLSA
Sbjct: 121 MWNGIRTMRQEKILSLPTFVSVFGSYCSAGRFKEATMSFEVMDRYEVEKDVVAVNSLLSA 180

Query: 246 ICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKEGNVEKAEVTFSEMVKRVGWNP 305
           IC+EENQTSKAWEFFEKHKEKIPLD DSFAILLEGWEKEGNVEKAEVTF EMVKR+GWNP
Sbjct: 181 ICSEENQTSKAWEFFEKHKEKIPLDGDSFAILLEGWEKEGNVEKAEVTFDEMVKRIGWNP 240

Query: 306 ENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLKFLSNALDSLIQQNDANHAILL 365
           ENVSSYDAFLITLVRGGRSE+AI VLLE+KKN CLPGLKFLSNALDSLIQQNDANHAILL
Sbjct: 241 ENVSSYDAFLITLVRGGRSEDAIKVLLELKKNRCLPGLKFLSNALDSLIQQNDANHAILL 300

Query: 366 WDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAMVFHGAFPNSLTYNLIFSCLIK 425
           WDIVV SGLVPNLI+YNAIIGLLSE SKI+D FRLLD+MVFHGAFPNS+TYNLIFSCLIK
Sbjct: 301 WDIVVGSGLVPNLIVYNAIIGLLSENSKIDDTFRLLDSMVFHGAFPNSVTYNLIFSCLIK 360

Query: 426 NKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMVENHIKPMDAS 485
           NKKVKE SQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYM ENHI+PMDAS
Sbjct: 361 NKKVKEVSQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMDENHIEPMDAS 420

Query: 486 ANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVLKHGFYEQRGSFRENYDSLLRR 545
           ANALLIGLCNL+RL EVRSFADDM+D++I I+ESTMK+LK+ FY QRGSFRENYD LLRR
Sbjct: 421 ANALLIGLCNLNRLTEVRSFADDMIDQRIEILESTMKLLKNCFYLQRGSFRENYDGLLRR 480

Query: 546 WRASSIL 553
           WRASSIL
Sbjct: 481 WRASSIL 487

[Close]

BLAST of ClCG11G016170 vs. NCBI nr
Match: XP_004150822.1 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial [Cucumis sativus])

HSP 1 Score: 859.4 bits (2219), Expect = 1.7e-245
Identity = 427/487 (87.68%), Postives = 459/487 (94.25%), Query Frame = 0


Query: 66  MAENPKMGVKNPSEIPPSPSPPSAKSPRFPSNLDLPDISPAAKTVCEVLVRTSRNDVDAA 125
           MAENPKMGVKNPS+IPPS SP S  SPRFP +LDLPDISPAAKT+CEVLVR SRN+VD A
Sbjct: 1   MAENPKMGVKNPSKIPPSSSPRSRNSPRFPLHLDLPDISPAAKTICEVLVRVSRNEVDGA 60

Query: 126 LSATGVAPSPELVQEVLRASYNYPSSAIKFFRWARQSAKQSAYSWNLMIDLLGKNELFDE 185
           L ATG+APSPELVQEVLR SYN PSSAIKFFRWARQ AKQSAYSWNLMIDLLGKNELF+E
Sbjct: 61  LLATGLAPSPELVQEVLRVSYNSPSSAIKFFRWARQLAKQSAYSWNLMIDLLGKNELFEE 120

Query: 186 MWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSFEVMDRYEVEKNVMAVNSLLSA 245
           MWNGIRTMRQEKI+SLPTFVSVFGSYCSAGR KEA M+FEVMDRYEVEK+V+AVNSLLSA
Sbjct: 121 MWNGIRTMRQEKILSLPTFVSVFGSYCSAGRSKEARMTFEVMDRYEVEKDVVAVNSLLSA 180

Query: 246 ICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKEGNVEKAEVTFSEMVKRVGWNP 305
           IC+EENQTS+AWEFFEKHKEKIPLD +SFAILLEGWEKEGNVEKA+VTF EMVKRVGWNP
Sbjct: 181 ICSEENQTSEAWEFFEKHKEKIPLDGESFAILLEGWEKEGNVEKAKVTFDEMVKRVGWNP 240

Query: 306 ENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLKFLSNALDSLIQQNDANHAILL 365
           ENVSSYDAFLITLVRGGRSE+AI VLL++KKN CLPGLKFLSNALDSLIQQNDANHAILL
Sbjct: 241 ENVSSYDAFLITLVRGGRSEDAIKVLLKLKKNRCLPGLKFLSNALDSLIQQNDANHAILL 300

Query: 366 WDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAMVFHGAFPNSLTYNLIFSCLIK 425
           WDIVV SGLVPNLI+YNAIIGLLSE SKI+D+FRLLD+MVFHGAFPNSLTYNLIFS LIK
Sbjct: 301 WDIVVGSGLVPNLIVYNAIIGLLSENSKIDDSFRLLDSMVFHGAFPNSLTYNLIFSSLIK 360

Query: 426 NKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMVENHIKPMDAS 485
           NKKVKE SQFFREMVKNECPPTPS+CAAAITMLFDGYDPETAIDIWNYM ENHI+PMD S
Sbjct: 361 NKKVKEVSQFFREMVKNECPPTPSSCAAAITMLFDGYDPETAIDIWNYMDENHIEPMDTS 420

Query: 486 ANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVLKHGFYEQRGSFRENYDSLLRR 545
           ANALLIGLCNL+RL EVR FADDM+D++I I+ESTMK+LK+ FY+QRG+FRENYD LLRR
Sbjct: 421 ANALLIGLCNLNRLTEVRRFADDMIDQRIDILESTMKLLKNCFYQQRGNFRENYDGLLRR 480

Query: 546 WRASSIL 553
           WRASSIL
Sbjct: 481 WRASSIL 487

[Close]

BLAST of ClCG11G016170 vs. NCBI nr
Match: KAG7024721.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 852.0 bits (2200), Expect = 2.8e-243
Identity = 419/484 (86.57%), Postives = 453/484 (93.60%), Query Frame = 0


Query: 66  MAENPKMGVKNPSEIPPSPSPPSAKSPRFPSNLDLPDISPAAKTVCEVLVRTSRNDVDAA 125
           MAENPK+GVK P ++PPS SPP AKSPR P +LD PDISPAAKTVC+VLVR S NDV+AA
Sbjct: 1   MAENPKIGVKKPFKLPPSSSPPLAKSPRLPVHLDAPDISPAAKTVCKVLVRASPNDVEAA 60

Query: 126 LSATGVAPSPELVQEVLRASYNYPSSAIKFFRWARQSAKQSAYSWNLMIDLLGKNELFDE 185
           LSATGV PSPELVQEVLR SYNYPSSAIKFFRWARQ AKQSAYSWNLM+DLLGKNELFD+
Sbjct: 61  LSATGVVPSPELVQEVLRVSYNYPSSAIKFFRWARQLAKQSAYSWNLMVDLLGKNELFDQ 120

Query: 186 MWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSFEVMDRYEVEKNVMAVNSLLSA 245
           MWN IRTMR+EK++SLPTFVSVFGSYCSAGRFK+A+ SFEVMDRY+VEK+V+AVNSLLSA
Sbjct: 121 MWNAIRTMREEKVLSLPTFVSVFGSYCSAGRFKDAIKSFEVMDRYDVEKDVVAVNSLLSA 180

Query: 246 ICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKEGNVEKAEVTFSEMVKRVGWNP 305
           ICTEENQTSKAWEFFEKHKEKIPLD DS+AILLEGWEKEGNVEKAEVTF EMVKRVGWNP
Sbjct: 181 ICTEENQTSKAWEFFEKHKEKIPLDGDSYAILLEGWEKEGNVEKAEVTFDEMVKRVGWNP 240

Query: 306 ENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLKFLSNALDSLIQQNDANHAILL 365
           ENVS+YDAFLITLVR G+S EA+ VLLE+K NGC PGLKFLSNALDSLI QNDA HAILL
Sbjct: 241 ENVSAYDAFLITLVRRGQSAEAVKVLLEIKNNGCSPGLKFLSNALDSLINQNDATHAILL 300

Query: 366 WDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAMVFHGAFPNSLTYNLIFSCLIK 425
           WDIVV SGLVPNLIMYNAIIGLLSEK KIED+FRLLDAMVFHGAFPNSLTYNLIFSCLIK
Sbjct: 301 WDIVVGSGLVPNLIMYNAIIGLLSEKGKIEDSFRLLDAMVFHGAFPNSLTYNLIFSCLIK 360

Query: 426 NKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMVENHIKPMDAS 485
           NKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWN+MV+N+IKPMDAS
Sbjct: 361 NKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNFMVDNNIKPMDAS 420

Query: 486 ANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVLKHGFYEQRGSFRENYDSLLRR 545
           ANALLIGLC+LDRL EVR FADDMLD++IGI+ESTMK L++GFY+QRG FR++YDSL RR
Sbjct: 421 ANALLIGLCDLDRLTEVRRFADDMLDQRIGILESTMKFLRNGFYQQRGRFRDSYDSLFRR 480

Query: 546 WRAS 550
           WR S
Sbjct: 481 WRDS 484

[Close]

BLAST of ClCG11G016170 vs. NCBI nr
Match: KAG6591855.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 852.0 bits (2200), Expect = 2.8e-243
Identity = 419/486 (86.21%), Postives = 454/486 (93.42%), Query Frame = 0


Query: 64  EAMAENPKMGVKNPSEIPPSPSPPSAKSPRFPSNLDLPDISPAAKTVCEVLVRTSRNDVD 123
           EAMAENPK+GVK P ++PPS SPP AKSPR P +LD PDISPAAKTVC+VL+R S NDV+
Sbjct: 3   EAMAENPKIGVKKPFKLPPSSSPPLAKSPRLPVHLDAPDISPAAKTVCKVLIRASPNDVE 62

Query: 124 AALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWARQSAKQSAYSWNLMIDLLGKNELF 183
           AALSATGV PSPELVQEVLR SYNYPSSAIKFFRWARQ AKQSAYSWNLM+DLLGKNELF
Sbjct: 63  AALSATGVVPSPELVQEVLRVSYNYPSSAIKFFRWARQLAKQSAYSWNLMVDLLGKNELF 122

Query: 184 DEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSFEVMDRYEVEKNVMAVNSLL 243
           D+MWN IRTMR+EK++SLPTFVSVFGSYCSAGRFK+A+ SFEVMDRY+VEK+V+AVNSLL
Sbjct: 123 DQMWNAIRTMREEKVLSLPTFVSVFGSYCSAGRFKDAIKSFEVMDRYDVEKDVVAVNSLL 182

Query: 244 SAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKEGNVEKAEVTFSEMVKRVGW 303
           SAICTEENQTSKAWEFFEKHKEKIPLD DS+AILLEGWEKEGNVEKAEVTF EMVKRVGW
Sbjct: 183 SAICTEENQTSKAWEFFEKHKEKIPLDGDSYAILLEGWEKEGNVEKAEVTFDEMVKRVGW 242

Query: 304 NPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLKFLSNALDSLIQQNDANHAI 363
           NPENVS+YDAFLITLVR G+S EA+ VLLE+K NGC PGLKFLSNALDSLI QNDA HAI
Sbjct: 243 NPENVSAYDAFLITLVRRGQSAEAVKVLLEIKNNGCSPGLKFLSNALDSLINQNDATHAI 302

Query: 364 LLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAMVFHGAFPNSLTYNLIFSCL 423
           LLWDIVV SGLVPNLIMYNAIIGLLSEK KIED+FRLLDAMVFHGAFPNSLTYNLIFSCL
Sbjct: 303 LLWDIVVGSGLVPNLIMYNAIIGLLSEKGKIEDSFRLLDAMVFHGAFPNSLTYNLIFSCL 362

Query: 424 IKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMVENHIKPMD 483
           IKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWN+MV+N+IKPMD
Sbjct: 363 IKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNFMVDNNIKPMD 422

Query: 484 ASANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVLKHGFYEQRGSFRENYDSLL 543
           ASANALLIGLC+LDRL EVR FADDMLD++IGI+ESTMK L++GFY+QRG  R++YDSL 
Sbjct: 423 ASANALLIGLCDLDRLTEVRRFADDMLDQRIGILESTMKFLRNGFYQQRGRSRDSYDSLF 482

Query: 544 RRWRAS 550
           RRWR S
Sbjct: 483 RRWRDS 488

[Close]

BLAST of ClCG11G016170 vs. ExPASy Swiss-Prot
Match: Q9FVX2 (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g77360 PE=2 SV=2)

HSP 1 Score: 204.5 bits (519), Expect = 3.0e-51
Identity = 122/423 (28.84%), Postives = 228/423 (53.90%), Query Frame = 0


Query: 94  FPSNLDLPDISPAAKTVCEVLVRTSRNDVDAALSATGVAPSPELVQEVLRASYNYPSSAI 153
           + S+  + D++  AK + +VL+ + +  +D+AL  +G+  S E+V++VL    N      
Sbjct: 59  YSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTY 118

Query: 154 KFFRWARQSA--KQSAYSWNLMIDLLGKNELFDEMWNGIRTMRQEKIISLPTFVSVFGSY 213
           +FF+W+ +    + S  ++++MI+   K   +  MW+ I  MR++K++++ TF  V   Y
Sbjct: 119 RFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKY 178

Query: 214 CSAGRFKEAMMSFEVMDRYEVEKNVMAVNSLLSAICTEENQTSKAWEFFEKHKEKIPLDE 273
             A +  EA+ +F VM++Y++  N++A N LLSA+C  +N   KA E FE  +++   D 
Sbjct: 179 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKN-VRKAQEVFENMRDRFTPDS 238

Query: 274 DSFAILLEGWEKEGNVEKAEVTFSEMVKRVGWNPENVSSYDAFLITLVRGGRSEEAINVL 333
            +++ILLEGW KE N+ KA   F EM+   G +P+ + +Y   +  L + GR +EA+ ++
Sbjct: 239 KTYSILLEGWGKEPNLPKAREVFREMID-AGCHPD-IVTYSIMVDILCKAGRVDEALGIV 298

Query: 334 LEMKKNGCLPGLKFLSNALDSLIQQNDANHAILLWDIVVASGLVPNLIMYNAIIGLLSEK 393
             M  + C P     S  + +   +N    A+  +  +  SG+  ++ ++N++IG   + 
Sbjct: 299 RSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKA 358

Query: 394 SKIEDAFRLLDAMVFHGAFPNSLTYNLIFSCLIKNKKVKEASQFFREMVKNECPPTPSNC 453
           +++++ +R+L  M   G  PNS + N+I   LI+  +  EA   FR+M+K  C P     
Sbjct: 359 NRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTY 418

Query: 454 AAAITMLFDGYDPETAIDIWNYMVENHIKPMDASANALLIGLCNLDRLKEVRSFADDMLD 513
              I M  +  + ETA  +W YM +  + P   + + L+ GLC     ++     ++M++
Sbjct: 419 TMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIE 477

Query: 514 RQI 515
             I
Sbjct: 479 MGI 477

[Close]

BLAST of ClCG11G016170 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 6.1e-44
Identity = 119/426 (27.93%), Postives = 212/426 (49.77%), Query Frame = 0


Query: 102 DISPAAKTVCEVLVRTSRNDVDAALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWA-- 161
           D S  A+ +C++L + + + V+  L+   V  SP L++EVL+   N    A+  F+WA  
Sbjct: 61  DASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN 120

Query: 162 RQSAKQSAYSWNLMIDLLGKNELFDEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKE 221
           ++  K +  ++N +I+ LGK + F  +W+ +  M+ +K++S  TF  +   Y  A + KE
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 180

Query: 222 AMMSFEVMDRYEVEKNVMAVNSLLSAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLE 281
           A+ +F  M+ +  +      N +L  +    N       F +  K++   D  S+ ILLE
Sbjct: 181 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 240

Query: 282 GWEKEGNVEKAEVTFSEMVKRVGWNPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGC 341
           GW +E N+ + +    EM K  G+ P+ V +Y   +    +  + EEAI    EM++  C
Sbjct: 241 GWGQELNLLRVDEVNREM-KDEGFEPD-VVAYGIIINAHCKAKKYEEAIRFFNEMEQRNC 300

Query: 342 LPGLKFLSNALDSLIQQNDANHAILLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFR 401
            P      + ++ L  +   N A+  ++   +SG       YNA++G      ++EDA++
Sbjct: 301 KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYK 360

Query: 402 LLDAMVFHGAFPNSLTYNLIFSCLIKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLF 461
            +D M   G  PN+ TY++I   LI+ ++ KEA + ++ M    C PT S     + M  
Sbjct: 361 TVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFC 420

Query: 462 DGYDPETAIDIWNYMVENHIKPMDASANALLIGLCNLDRLKEVRSFADDMLD---RQIGI 521
           +    + AI IW+ M    + P     ++L+  LC+ ++L E   + ++MLD   R  G 
Sbjct: 421 NKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGH 480

Query: 522 MESTMK 523
           M S +K
Sbjct: 481 MFSRLK 481

[Close]

BLAST of ClCG11G016170 vs. ExPASy Swiss-Prot
Match: Q9LZP3 (Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62470 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 2.3e-35
Identity = 112/445 (25.17%), Postives = 213/445 (47.87%), Query Frame = 0


Query: 110 VCEV---LVRTSRNDVDAALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWA--RQSAK 169
           VC+V   L    RN ++A L    +  S +L+ EVL    +    A +FF WA  RQ   
Sbjct: 134 VCKVIDELFALDRN-MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFA 193

Query: 170 QSAYSWNLMIDLLGKNELFDEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSF 229
             + ++N M+ +L K   F+ M + +  M  + ++++ TF     ++ +A   K+A+  F
Sbjct: 194 HDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIF 253

Query: 230 EVMDRYEVEKNVMAVNSLLSAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKE 289
           E+M +Y+ +  V  +N LL ++        +A   F+K KE+   +  ++ +LL GW + 
Sbjct: 254 ELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 313

Query: 290 GNVEKAEVTFSEMVKRVGWNPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLK 349
            N+ +A   +++M+ + G  P+ + +++  L  L+R  +  +AI +   MK  G  P ++
Sbjct: 314 RNLIEAARIWNDMIDQ-GLKPD-IVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVR 373

Query: 350 FLSNALDSLIQQNDANHAILLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAM 409
             +  +    +Q+    AI  +D +V SGL P+  +Y  +I     + K++  + LL  M
Sbjct: 374 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 433

Query: 410 VFHGAFPNSLTYNLIFSCLIKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDP 469
              G  P+  TYN +   +   K  + A++ + +M++NE  P+       +   F   + 
Sbjct: 434 QEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNY 493

Query: 470 ETAIDIWNYMVENHIKPMDASANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVL 529
           E    +W  M++  I P D S   L+ GL    + +E   + ++MLD+  G+    +   
Sbjct: 494 EMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDK--GMKTPLIDYN 553

Query: 530 KHGFYEQRGSFRENYDSLLRRWRAS 550
           K      RG   E ++ L +R + S
Sbjct: 554 KFAADFHRGGQPEIFEELAQRAKFS 572

[Close]

BLAST of ClCG11G016170 vs. ExPASy Swiss-Prot
Match: Q3EAF8 (Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g62540 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.2e-35
Identity = 111/445 (24.94%), Postives = 214/445 (48.09%), Query Frame = 0


Query: 110 VCEV---LVRTSRNDVDAALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWA--RQSAK 169
           VC+V   L    RN ++A L    +  S +L+ EVL    +    A +FF WA  RQ   
Sbjct: 134 VCKVIDELFALDRN-MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFA 193

Query: 170 QSAYSWNLMIDLLGKNELFDEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSF 229
            ++ ++N M+ +L K   F+ M + +  M  + ++++ TF     ++ +A   K+A+  F
Sbjct: 194 HASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIF 253

Query: 230 EVMDRYEVEKNVMAVNSLLSAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKE 289
           E+M +Y+ +  V  +N LL ++        +A   F+K KE+   +  ++ +LL GW + 
Sbjct: 254 ELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 313

Query: 290 GNVEKAEVTFSEMVKRVGWNPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLK 349
            N+ +A   +++M+   G  P+ + +++  L  L+R  +  +AI +   MK  G  P ++
Sbjct: 314 RNLIEAARIWNDMIDH-GLKPD-IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR 373

Query: 350 FLSNALDSLIQQNDANHAILLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAM 409
             +  +    +Q+    AI  +D +V SGL P+  +Y  +I     + K++  + LL  M
Sbjct: 374 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 433

Query: 410 VFHGAFPNSLTYNLIFSCLIKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDP 469
              G  P+  TYN +   +   K  +  ++ + +M++NE  P+       +   F   + 
Sbjct: 434 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 493

Query: 470 ETAIDIWNYMVENHIKPMDASANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVL 529
           E    +W+ M++  I P D S   L+ GL +  + +E   + ++MLD+  G+    +   
Sbjct: 494 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK--GMKTPLIDYN 553

Query: 530 KHGFYEQRGSFRENYDSLLRRWRAS 550
           K      RG   E ++ L +R + S
Sbjct: 554 KFAADFHRGGQPEIFEELAQRAKFS 572

[Close]

BLAST of ClCG11G016170 vs. ExPASy Swiss-Prot
Match: Q9LEQ7 (Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g14820 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 6.8e-35
Identity = 111/445 (24.94%), Postives = 213/445 (47.87%), Query Frame = 0


Query: 110 VCEV---LVRTSRNDVDAALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWA--RQSAK 169
           VC+V   L    RN ++A L    +  S +L+ EVL    +    A +FF WA  RQ   
Sbjct: 133 VCKVIDELFALDRN-MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFA 192

Query: 170 QSAYSWNLMIDLLGKNELFDEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSF 229
             + ++N M+ +L K   F+ M + +  M  + ++++ TF     ++ +A   K+A+  F
Sbjct: 193 HDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIF 252

Query: 230 EVMDRYEVEKNVMAVNSLLSAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKE 289
           E+M +Y+ +  V  +N LL ++        +A   F+K KE+   +  ++ +LL GW + 
Sbjct: 253 ELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 312

Query: 290 GNVEKAEVTFSEMVKRVGWNPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLK 349
            N+ +A   +++M+   G  P+ + +++  L  L+R  +  +AI +   MK  G  P ++
Sbjct: 313 RNLIEAARIWNDMIDH-GLKPD-IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR 372

Query: 350 FLSNALDSLIQQNDANHAILLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAM 409
             +  +    +Q+    AI  +D +V SGL P+  +Y  +I     + K++  + LL  M
Sbjct: 373 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 432

Query: 410 VFHGAFPNSLTYNLIFSCLIKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDP 469
              G  P+  TYN +   +   K  +  ++ + +M++NE  P+       +   F   + 
Sbjct: 433 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 492

Query: 470 ETAIDIWNYMVENHIKPMDASANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVL 529
           E    +W+ M++  I P D S   L+ GL +  + +E   + ++MLD+  G+    +   
Sbjct: 493 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK--GMKTPLIDYN 552

Query: 530 KHGFYEQRGSFRENYDSLLRRWRAS 550
           K      RG   E ++ L +R + S
Sbjct: 553 KFAADFHRGGQPEIFEELAQRAKFS 571

[Close]

BLAST of ClCG11G016170 vs. ExPASy TrEMBL
Match: A0A5A7UDH9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G00620 PE=4 SV=1)

HSP 1 Score: 879.8 bits (2272), Expect = 6.0e-252
Identity = 435/487 (89.32%), Postives = 464/487 (95.28%), Query Frame = 0


Query: 66  MAENPKMGVKNPSEIPPSPSPPSAKSPRFPSNLDLPDISPAAKTVCEVLVRTSRNDVDAA 125
           MAENPKMGV+NPS+IPPS +P S  SPRFPS+LDLPDISPAAKT+CEVL++  RN+VDAA
Sbjct: 1   MAENPKMGVRNPSKIPPSSAPRSPNSPRFPSHLDLPDISPAAKTICEVLIKVPRNEVDAA 60

Query: 126 LSATGVAPSPELVQEVLRASYNYPSSAIKFFRWARQSAKQSAYSWNLMIDLLGKNELFDE 185
           LSATG+APSPELVQEVLR SYNYPSSAIKFFRWARQ AKQSAYSWNLMIDLLGKNELF+E
Sbjct: 61  LSATGLAPSPELVQEVLRVSYNYPSSAIKFFRWARQLAKQSAYSWNLMIDLLGKNELFEE 120

Query: 186 MWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSFEVMDRYEVEKNVMAVNSLLSA 245
           MWNGIRTMRQEKI+SLPTFVSVFGSYCSAGRFKEA MSFEVMDRYEVEK+V+AVNSLLSA
Sbjct: 121 MWNGIRTMRQEKILSLPTFVSVFGSYCSAGRFKEATMSFEVMDRYEVEKDVVAVNSLLSA 180

Query: 246 ICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKEGNVEKAEVTFSEMVKRVGWNP 305
           IC+EENQTSKAWEFFEKHKEKIPLD DSFAILLEGWEKEGNVEKAEVTF EMVKR+GWNP
Sbjct: 181 ICSEENQTSKAWEFFEKHKEKIPLDGDSFAILLEGWEKEGNVEKAEVTFDEMVKRIGWNP 240

Query: 306 ENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLKFLSNALDSLIQQNDANHAILL 365
           ENVSSYDAFLITLVRGGRSE+AI VLLE+KKN CLPGLKFLSNALDSLIQQNDANHAILL
Sbjct: 241 ENVSSYDAFLITLVRGGRSEDAIKVLLELKKNRCLPGLKFLSNALDSLIQQNDANHAILL 300

Query: 366 WDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAMVFHGAFPNSLTYNLIFSCLIK 425
           WDIVV SGLVPNLI+YNAIIGLLSE SKI+D FRLLD+MVFHGAFPNS+TYNLIFSCLIK
Sbjct: 301 WDIVVGSGLVPNLIVYNAIIGLLSENSKIDDTFRLLDSMVFHGAFPNSVTYNLIFSCLIK 360

Query: 426 NKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMVENHIKPMDAS 485
           NKKVKE SQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYM ENHI+PMDAS
Sbjct: 361 NKKVKEVSQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMDENHIEPMDAS 420

Query: 486 ANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVLKHGFYEQRGSFRENYDSLLRR 545
           ANALLIGLCNL+RL EVRSFADDM+D++I I+ESTMK+LK+ FY QRGSFRENYD LLRR
Sbjct: 421 ANALLIGLCNLNRLTEVRSFADDMIDQRIEILESTMKLLKNCFYLQRGSFRENYDGLLRR 480

Query: 546 WRASSIL 553
           WRASSIL
Sbjct: 481 WRASSIL 487

[Close]

BLAST of ClCG11G016170 vs. ExPASy TrEMBL
Match: A0A0A0L064 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G242870 PE=4 SV=1)

HSP 1 Score: 859.4 bits (2219), Expect = 8.4e-246
Identity = 427/487 (87.68%), Postives = 459/487 (94.25%), Query Frame = 0


Query: 66  MAENPKMGVKNPSEIPPSPSPPSAKSPRFPSNLDLPDISPAAKTVCEVLVRTSRNDVDAA 125
           MAENPKMGVKNPS+IPPS SP S  SPRFP +LDLPDISPAAKT+CEVLVR SRN+VD A
Sbjct: 1   MAENPKMGVKNPSKIPPSSSPRSRNSPRFPLHLDLPDISPAAKTICEVLVRVSRNEVDGA 60

Query: 126 LSATGVAPSPELVQEVLRASYNYPSSAIKFFRWARQSAKQSAYSWNLMIDLLGKNELFDE 185
           L ATG+APSPELVQEVLR SYN PSSAIKFFRWARQ AKQSAYSWNLMIDLLGKNELF+E
Sbjct: 61  LLATGLAPSPELVQEVLRVSYNSPSSAIKFFRWARQLAKQSAYSWNLMIDLLGKNELFEE 120

Query: 186 MWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSFEVMDRYEVEKNVMAVNSLLSA 245
           MWNGIRTMRQEKI+SLPTFVSVFGSYCSAGR KEA M+FEVMDRYEVEK+V+AVNSLLSA
Sbjct: 121 MWNGIRTMRQEKILSLPTFVSVFGSYCSAGRSKEARMTFEVMDRYEVEKDVVAVNSLLSA 180

Query: 246 ICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKEGNVEKAEVTFSEMVKRVGWNP 305
           IC+EENQTS+AWEFFEKHKEKIPLD +SFAILLEGWEKEGNVEKA+VTF EMVKRVGWNP
Sbjct: 181 ICSEENQTSEAWEFFEKHKEKIPLDGESFAILLEGWEKEGNVEKAKVTFDEMVKRVGWNP 240

Query: 306 ENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLKFLSNALDSLIQQNDANHAILL 365
           ENVSSYDAFLITLVRGGRSE+AI VLL++KKN CLPGLKFLSNALDSLIQQNDANHAILL
Sbjct: 241 ENVSSYDAFLITLVRGGRSEDAIKVLLKLKKNRCLPGLKFLSNALDSLIQQNDANHAILL 300

Query: 366 WDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAMVFHGAFPNSLTYNLIFSCLIK 425
           WDIVV SGLVPNLI+YNAIIGLLSE SKI+D+FRLLD+MVFHGAFPNSLTYNLIFS LIK
Sbjct: 301 WDIVVGSGLVPNLIVYNAIIGLLSENSKIDDSFRLLDSMVFHGAFPNSLTYNLIFSSLIK 360

Query: 426 NKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMVENHIKPMDAS 485
           NKKVKE SQFFREMVKNECPPTPS+CAAAITMLFDGYDPETAIDIWNYM ENHI+PMD S
Sbjct: 361 NKKVKEVSQFFREMVKNECPPTPSSCAAAITMLFDGYDPETAIDIWNYMDENHIEPMDTS 420

Query: 486 ANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVLKHGFYEQRGSFRENYDSLLRR 545
           ANALLIGLCNL+RL EVR FADDM+D++I I+ESTMK+LK+ FY+QRG+FRENYD LLRR
Sbjct: 421 ANALLIGLCNLNRLTEVRRFADDMIDQRIDILESTMKLLKNCFYQQRGNFRENYDGLLRR 480

Query: 546 WRASSIL 553
           WRASSIL
Sbjct: 481 WRASSIL 487

[Close]

BLAST of ClCG11G016170 vs. ExPASy TrEMBL
Match: A0A6J1IPL0 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111477048 PE=4 SV=1)

HSP 1 Score: 852.0 bits (2200), Expect = 1.3e-243
Identity = 419/486 (86.21%), Postives = 454/486 (93.42%), Query Frame = 0


Query: 64  EAMAENPKMGVKNPSEIPPSPSPPSAKSPRFPSNLDLPDISPAAKTVCEVLVRTSRNDVD 123
           EAMAENPK+GVK P ++PPS SPP AKSPR P +LD PDISPAAKTVC+VLVR S NDV+
Sbjct: 3   EAMAENPKIGVKKPFKLPPSSSPPLAKSPRLPVHLDAPDISPAAKTVCKVLVRASPNDVE 62

Query: 124 AALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWARQSAKQSAYSWNLMIDLLGKNELF 183
           AALSATGV PSPELVQEVLR SYNYPSSAIKFFRWARQ AKQSAYSWN+M+DLLGKNELF
Sbjct: 63  AALSATGVVPSPELVQEVLRVSYNYPSSAIKFFRWARQLAKQSAYSWNMMVDLLGKNELF 122

Query: 184 DEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSFEVMDRYEVEKNVMAVNSLL 243
           D+MWN IRTMR+EK++SLPTFVSVFGSYCSAGRFK+A+ SFEVMDRY+VEK+V+AVNSLL
Sbjct: 123 DQMWNAIRTMREEKVLSLPTFVSVFGSYCSAGRFKDAIKSFEVMDRYDVEKDVVAVNSLL 182

Query: 244 SAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKEGNVEKAEVTFSEMVKRVGW 303
           SAICTEENQTSKAWEFF+KHKEKIPLD DS+AILLEGWEKEGNVEKAEVTF EMVKRVGW
Sbjct: 183 SAICTEENQTSKAWEFFKKHKEKIPLDGDSYAILLEGWEKEGNVEKAEVTFDEMVKRVGW 242

Query: 304 NPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLKFLSNALDSLIQQNDANHAI 363
           NPENVS+YDAFLITLVR G+S EA+ VLLE+K NGC PGLKFLSNALDSLI QNDA HAI
Sbjct: 243 NPENVSAYDAFLITLVRRGQSAEAVKVLLEIKNNGCSPGLKFLSNALDSLINQNDATHAI 302

Query: 364 LLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAMVFHGAFPNSLTYNLIFSCL 423
           LLWDIVV SGLVPNLIMYNAIIGLLSEK KIED+FRLLDAMVFHGAFPNSLTYNLIFSCL
Sbjct: 303 LLWDIVVGSGLVPNLIMYNAIIGLLSEKGKIEDSFRLLDAMVFHGAFPNSLTYNLIFSCL 362

Query: 424 IKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMVENHIKPMD 483
           IKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWN+MV+N+IKPMD
Sbjct: 363 IKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNFMVDNNIKPMD 422

Query: 484 ASANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVLKHGFYEQRGSFRENYDSLL 543
           ASANALLIGLC+LDRL EVR FADDMLD++IGI ESTMK L++GFY+QRG FR++YDSL 
Sbjct: 423 ASANALLIGLCDLDRLTEVRRFADDMLDQRIGISESTMKFLRNGFYQQRGRFRDSYDSLF 482

Query: 544 RRWRAS 550
           RRWR S
Sbjct: 483 RRWRDS 488

[Close]

BLAST of ClCG11G016170 vs. ExPASy TrEMBL
Match: A0A6J1F937 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111443435 PE=4 SV=1)

HSP 1 Score: 850.5 bits (2196), Expect = 3.9e-243
Identity = 419/486 (86.21%), Postives = 453/486 (93.21%), Query Frame = 0


Query: 64  EAMAENPKMGVKNPSEIPPSPSPPSAKSPRFPSNLDLPDISPAAKTVCEVLVRTSRNDVD 123
           EAMAENPK+GVK P ++PPS SPP AKSPR P +LD PDISPAAKTVC+VLVR S NDV+
Sbjct: 3   EAMAENPKIGVKKPFKLPPSSSPPLAKSPRLPVHLDAPDISPAAKTVCKVLVRASPNDVE 62

Query: 124 AALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWARQSAKQSAYSWNLMIDLLGKNELF 183
           AALSATGV PS ELVQEVLR SYNYPSSAIKFFRWARQ AKQSAYSWNLM+DLLGKNELF
Sbjct: 63  AALSATGVVPSTELVQEVLRVSYNYPSSAIKFFRWARQLAKQSAYSWNLMVDLLGKNELF 122

Query: 184 DEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSFEVMDRYEVEKNVMAVNSLL 243
           D+MWN IRTMR+EK++SLPTFVSVFGSYCSAGRFK+A+ SFEVMDRY+VEK+V+AVNSLL
Sbjct: 123 DQMWNAIRTMREEKVLSLPTFVSVFGSYCSAGRFKDAIKSFEVMDRYDVEKDVVAVNSLL 182

Query: 244 SAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKEGNVEKAEVTFSEMVKRVGW 303
           SAICTEENQTSKAWEFFEKHKEKIPLD DS+AILLEGWEK+GNVEKAEVTF EMVKRVGW
Sbjct: 183 SAICTEENQTSKAWEFFEKHKEKIPLDGDSYAILLEGWEKDGNVEKAEVTFDEMVKRVGW 242

Query: 304 NPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLKFLSNALDSLIQQNDANHAI 363
           NPENVS+YDAFLITLVR G+S EA+ VLLE+K NGC PGLKFLSNALDSLI QNDA HAI
Sbjct: 243 NPENVSAYDAFLITLVRRGQSAEAVKVLLEIKNNGCSPGLKFLSNALDSLINQNDATHAI 302

Query: 364 LLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAMVFHGAFPNSLTYNLIFSCL 423
           LLWDIVV SGLVPNLIMYNAIIGLLSEK KIED+FRLLDAMVFHGAFPNSLTYNLIFSCL
Sbjct: 303 LLWDIVVGSGLVPNLIMYNAIIGLLSEKGKIEDSFRLLDAMVFHGAFPNSLTYNLIFSCL 362

Query: 424 IKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMVENHIKPMD 483
           IKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWN+MV+N+IKPMD
Sbjct: 363 IKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNFMVDNNIKPMD 422

Query: 484 ASANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVLKHGFYEQRGSFRENYDSLL 543
           ASANALLIGLC+LDRL EVR FADDMLD++IGI ESTMK L++GFY+QRG FR++YDSL 
Sbjct: 423 ASANALLIGLCDLDRLTEVRRFADDMLDQRIGIFESTMKFLRNGFYQQRGRFRDSYDSLF 482

Query: 544 RRWRAS 550
           RRWR S
Sbjct: 483 RRWRDS 488

[Close]

BLAST of ClCG11G016170 vs. ExPASy TrEMBL
Match: A0A6J1CG53 (pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111011123 PE=4 SV=1)

HSP 1 Score: 849.0 bits (2192), Expect = 1.1e-242
Identity = 420/489 (85.89%), Postives = 458/489 (93.66%), Query Frame = 0


Query: 64  EAMAENPKMGVKNPSEIPPSPSPPS---AKSPRFPSNLDLPDISPAAKTVCEVLVRTSRN 123
           E+MAENPK+G+ NP +IPP  SPPS   A+SPRFP +LD PD+SPAAKTVCEVL+R S  
Sbjct: 3   ESMAENPKIGLGNPPKIPPGFSPPSRPPAQSPRFPLHLDEPDVSPAAKTVCEVLIRASPK 62

Query: 124 DVDAALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWARQSAKQSAYSWNLMIDLLGKN 183
           DV+AAL+ATGVAPSPELVQEVLR SYNYPSSAIKFFRWA Q A+QSAYSWNLMIDLLGKN
Sbjct: 63  DVEAALAATGVAPSPELVQEVLRLSYNYPSSAIKFFRWAGQLAQQSAYSWNLMIDLLGKN 122

Query: 184 ELFDEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSFEVMDRYEVEKNVMAVN 243
           ELFD+MWN IRTMR+EK++SLPTFVSVFGSYCSAGRFK+AMMSFEVMDRYEVEK+V+AVN
Sbjct: 123 ELFDQMWNAIRTMRKEKVLSLPTFVSVFGSYCSAGRFKDAMMSFEVMDRYEVEKDVVAVN 182

Query: 244 SLLSAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKEGNVEKAEVTFSEMVKR 303
           SLLSAICTEENQTSKAWEFFEK+KEKIP+D DSFAILLEGWEKEGNVE+A+VTF EMVKR
Sbjct: 183 SLLSAICTEENQTSKAWEFFEKNKEKIPVDGDSFAILLEGWEKEGNVEEAKVTFGEMVKR 242

Query: 304 VGWNPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLKFLSNALDSLIQQNDAN 363
           VGWNP+NVS+YDAFLITLVRGG+S EAI  LLEMKKNGCLPGLKFLSNALDSLI+QNDA+
Sbjct: 243 VGWNPQNVSAYDAFLITLVRGGQSGEAIEFLLEMKKNGCLPGLKFLSNALDSLIKQNDAD 302

Query: 364 HAILLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAMVFHGAFPNSLTYNLIF 423
           HAI+LWDIVV SGLVPNLIMYNAIIGLLSE  KI+D+FRLLDAMVFHGAFPNSLTYNLIF
Sbjct: 303 HAIILWDIVVGSGLVPNLIMYNAIIGLLSENGKIDDSFRLLDAMVFHGAFPNSLTYNLIF 362

Query: 424 SCLIKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDPETAIDIWNYMVENHIK 483
           SCLIK KKV+EASQ FREMVKNECPPTPSNCAAAI+M FDGYDPETAIDIWN+MVENHIK
Sbjct: 363 SCLIKTKKVREASQIFREMVKNECPPTPSNCAAAISMFFDGYDPETAIDIWNFMVENHIK 422

Query: 484 PMDASANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVLKHGFYEQRGSFRENYD 543
           PMDASANALLIGLCNLDRL EVRSFADDMLDR+IGI ESTMK+LK+GFY+QRGS RE YD
Sbjct: 423 PMDASANALLIGLCNLDRLTEVRSFADDMLDRRIGIYESTMKILKNGFYQQRGSVREKYD 482

Query: 544 SLLRRWRAS 550
           SLLRRWR+S
Sbjct: 483 SLLRRWRSS 491

[Close]

BLAST of ClCG11G016170 vs. TAIR 10
Match: AT1G77360.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 204.5 bits (519), Expect = 2.2e-52
Identity = 122/423 (28.84%), Postives = 228/423 (53.90%), Query Frame = 0


Query: 94  FPSNLDLPDISPAAKTVCEVLVRTSRNDVDAALSATGVAPSPELVQEVLRASYNYPSSAI 153
           + S+  + D++  AK + +VL+ + +  +D+AL  +G+  S E+V++VL    N      
Sbjct: 59  YSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTY 118

Query: 154 KFFRWARQSA--KQSAYSWNLMIDLLGKNELFDEMWNGIRTMRQEKIISLPTFVSVFGSY 213
           +FF+W+ +    + S  ++++MI+   K   +  MW+ I  MR++K++++ TF  V   Y
Sbjct: 119 RFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKY 178

Query: 214 CSAGRFKEAMMSFEVMDRYEVEKNVMAVNSLLSAICTEENQTSKAWEFFEKHKEKIPLDE 273
             A +  EA+ +F VM++Y++  N++A N LLSA+C  +N   KA E FE  +++   D 
Sbjct: 179 ARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKN-VRKAQEVFENMRDRFTPDS 238

Query: 274 DSFAILLEGWEKEGNVEKAEVTFSEMVKRVGWNPENVSSYDAFLITLVRGGRSEEAINVL 333
            +++ILLEGW KE N+ KA   F EM+   G +P+ + +Y   +  L + GR +EA+ ++
Sbjct: 239 KTYSILLEGWGKEPNLPKAREVFREMID-AGCHPD-IVTYSIMVDILCKAGRVDEALGIV 298

Query: 334 LEMKKNGCLPGLKFLSNALDSLIQQNDANHAILLWDIVVASGLVPNLIMYNAIIGLLSEK 393
             M  + C P     S  + +   +N    A+  +  +  SG+  ++ ++N++IG   + 
Sbjct: 299 RSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKA 358

Query: 394 SKIEDAFRLLDAMVFHGAFPNSLTYNLIFSCLIKNKKVKEASQFFREMVKNECPPTPSNC 453
           +++++ +R+L  M   G  PNS + N+I   LI+  +  EA   FR+M+K  C P     
Sbjct: 359 NRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VCEPDADTY 418

Query: 454 AAAITMLFDGYDPETAIDIWNYMVENHIKPMDASANALLIGLCNLDRLKEVRSFADDMLD 513
              I M  +  + ETA  +W YM +  + P   + + L+ GLC     ++     ++M++
Sbjct: 419 TMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIE 477

Query: 514 RQI 515
             I
Sbjct: 479 MGI 477

[Close]

BLAST of ClCG11G016170 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 180.3 bits (456), Expect = 4.4e-45
Identity = 119/426 (27.93%), Postives = 212/426 (49.77%), Query Frame = 0


Query: 102 DISPAAKTVCEVLVRTSRNDVDAALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWA-- 161
           D S  A+ +C++L + + + V+  L+   V  SP L++EVL+   N    A+  F+WA  
Sbjct: 61  DASQDAERICKILTKFTDSKVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAEN 120

Query: 162 RQSAKQSAYSWNLMIDLLGKNELFDEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKE 221
           ++  K +  ++N +I+ LGK + F  +W+ +  M+ +K++S  TF  +   Y  A + KE
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALISRRYARARKVKE 180

Query: 222 AMMSFEVMDRYEVEKNVMAVNSLLSAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLE 281
           A+ +F  M+ +  +      N +L  +    N       F +  K++   D  S+ ILLE
Sbjct: 181 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 240

Query: 282 GWEKEGNVEKAEVTFSEMVKRVGWNPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGC 341
           GW +E N+ + +    EM K  G+ P+ V +Y   +    +  + EEAI    EM++  C
Sbjct: 241 GWGQELNLLRVDEVNREM-KDEGFEPD-VVAYGIIINAHCKAKKYEEAIRFFNEMEQRNC 300

Query: 342 LPGLKFLSNALDSLIQQNDANHAILLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFR 401
            P      + ++ L  +   N A+  ++   +SG       YNA++G      ++EDA++
Sbjct: 301 KPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYK 360

Query: 402 LLDAMVFHGAFPNSLTYNLIFSCLIKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLF 461
            +D M   G  PN+ TY++I   LI+ ++ KEA + ++ M    C PT S     + M  
Sbjct: 361 TVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFC 420

Query: 462 DGYDPETAIDIWNYMVENHIKPMDASANALLIGLCNLDRLKEVRSFADDMLD---RQIGI 521
           +    + AI IW+ M    + P     ++L+  LC+ ++L E   + ++MLD   R  G 
Sbjct: 421 NKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGH 480

Query: 522 MESTMK 523
           M S +K
Sbjct: 481 MFSRLK 481

[Close]

BLAST of ClCG11G016170 vs. TAIR 10
Match: AT3G62470.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 151.8 bits (382), Expect = 1.7e-36
Identity = 112/445 (25.17%), Postives = 213/445 (47.87%), Query Frame = 0


Query: 110 VCEV---LVRTSRNDVDAALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWA--RQSAK 169
           VC+V   L    RN ++A L    +  S +L+ EVL    +    A +FF WA  RQ   
Sbjct: 134 VCKVIDELFALDRN-MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFA 193

Query: 170 QSAYSWNLMIDLLGKNELFDEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSF 229
             + ++N M+ +L K   F+ M + +  M  + ++++ TF     ++ +A   K+A+  F
Sbjct: 194 HDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIF 253

Query: 230 EVMDRYEVEKNVMAVNSLLSAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKE 289
           E+M +Y+ +  V  +N LL ++        +A   F+K KE+   +  ++ +LL GW + 
Sbjct: 254 ELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 313

Query: 290 GNVEKAEVTFSEMVKRVGWNPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLK 349
            N+ +A   +++M+ + G  P+ + +++  L  L+R  +  +AI +   MK  G  P ++
Sbjct: 314 RNLIEAARIWNDMIDQ-GLKPD-IVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVR 373

Query: 350 FLSNALDSLIQQNDANHAILLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAM 409
             +  +    +Q+    AI  +D +V SGL P+  +Y  +I     + K++  + LL  M
Sbjct: 374 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 433

Query: 410 VFHGAFPNSLTYNLIFSCLIKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDP 469
              G  P+  TYN +   +   K  + A++ + +M++NE  P+       +   F   + 
Sbjct: 434 QEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNY 493

Query: 470 ETAIDIWNYMVENHIKPMDASANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVL 529
           E    +W  M++  I P D S   L+ GL    + +E   + ++MLD+  G+    +   
Sbjct: 494 EMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDK--GMKTPLIDYN 553

Query: 530 KHGFYEQRGSFRENYDSLLRRWRAS 550
           K      RG   E ++ L +R + S
Sbjct: 554 KFAADFHRGGQPEIFEELAQRAKFS 572

[Close]

BLAST of ClCG11G016170 vs. TAIR 10
Match: AT3G62540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 150.6 bits (379), Expect = 3.7e-36
Identity = 111/445 (24.94%), Postives = 214/445 (48.09%), Query Frame = 0


Query: 110 VCEV---LVRTSRNDVDAALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWA--RQSAK 169
           VC+V   L    RN ++A L    +  S +L+ EVL    +    A +FF WA  RQ   
Sbjct: 134 VCKVIDELFALDRN-MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFA 193

Query: 170 QSAYSWNLMIDLLGKNELFDEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSF 229
            ++ ++N M+ +L K   F+ M + +  M  + ++++ TF     ++ +A   K+A+  F
Sbjct: 194 HASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIF 253

Query: 230 EVMDRYEVEKNVMAVNSLLSAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKE 289
           E+M +Y+ +  V  +N LL ++        +A   F+K KE+   +  ++ +LL GW + 
Sbjct: 254 ELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 313

Query: 290 GNVEKAEVTFSEMVKRVGWNPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLK 349
            N+ +A   +++M+   G  P+ + +++  L  L+R  +  +AI +   MK  G  P ++
Sbjct: 314 RNLIEAARIWNDMIDH-GLKPD-IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR 373

Query: 350 FLSNALDSLIQQNDANHAILLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAM 409
             +  +    +Q+    AI  +D +V SGL P+  +Y  +I     + K++  + LL  M
Sbjct: 374 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 433

Query: 410 VFHGAFPNSLTYNLIFSCLIKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDP 469
              G  P+  TYN +   +   K  +  ++ + +M++NE  P+       +   F   + 
Sbjct: 434 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 493

Query: 470 ETAIDIWNYMVENHIKPMDASANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVL 529
           E    +W+ M++  I P D S   L+ GL +  + +E   + ++MLD+  G+    +   
Sbjct: 494 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK--GMKTPLIDYN 553

Query: 530 KHGFYEQRGSFRENYDSLLRRWRAS 550
           K      RG   E ++ L +R + S
Sbjct: 554 KFAADFHRGGQPEIFEELAQRAKFS 572

[Close]

BLAST of ClCG11G016170 vs. TAIR 10
Match: AT5G14820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 4.8e-36
Identity = 111/445 (24.94%), Postives = 213/445 (47.87%), Query Frame = 0


Query: 110 VCEV---LVRTSRNDVDAALSATGVAPSPELVQEVLRASYNYPSSAIKFFRWA--RQSAK 169
           VC+V   L    RN ++A L    +  S +L+ EVL    +    A +FF WA  RQ   
Sbjct: 133 VCKVIDELFALDRN-MEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFA 192

Query: 170 QSAYSWNLMIDLLGKNELFDEMWNGIRTMRQEKIISLPTFVSVFGSYCSAGRFKEAMMSF 229
             + ++N M+ +L K   F+ M + +  M  + ++++ TF     ++ +A   K+A+  F
Sbjct: 193 HDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIF 252

Query: 230 EVMDRYEVEKNVMAVNSLLSAICTEENQTSKAWEFFEKHKEKIPLDEDSFAILLEGWEKE 289
           E+M +Y+ +  V  +N LL ++        +A   F+K KE+   +  ++ +LL GW + 
Sbjct: 253 ELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRV 312

Query: 290 GNVEKAEVTFSEMVKRVGWNPENVSSYDAFLITLVRGGRSEEAINVLLEMKKNGCLPGLK 349
            N+ +A   +++M+   G  P+ + +++  L  L+R  +  +AI +   MK  G  P ++
Sbjct: 313 RNLIEAARIWNDMIDH-GLKPD-IVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVR 372

Query: 350 FLSNALDSLIQQNDANHAILLWDIVVASGLVPNLIMYNAIIGLLSEKSKIEDAFRLLDAM 409
             +  +    +Q+    AI  +D +V SGL P+  +Y  +I     + K++  + LL  M
Sbjct: 373 SYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEM 432

Query: 410 VFHGAFPNSLTYNLIFSCLIKNKKVKEASQFFREMVKNECPPTPSNCAAAITMLFDGYDP 469
              G  P+  TYN +   +   K  +  ++ + +M++NE  P+       +   F   + 
Sbjct: 433 QEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNY 492

Query: 470 ETAIDIWNYMVENHIKPMDASANALLIGLCNLDRLKEVRSFADDMLDRQIGIMESTMKVL 529
           E    +W+ M++  I P D S   L+ GL +  + +E   + ++MLD+  G+    +   
Sbjct: 493 EMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK--GMKTPLIDYN 552

Query: 530 KHGFYEQRGSFRENYDSLLRRWRAS 550
           K      RG   E ++ L +R + S
Sbjct: 553 KFAADFHRGGQPEIFEELAQRAKFS 571

The following BLAST results are available for this feature:

BLAST of ClCG11G016170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900068.1	7.5e-257	92.02	pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Benin...	[more]
KAA0052256.1	1.2e-251	89.32	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK01821...	[more]
XP_004150822.1	1.7e-245	87.68	pentatricopeptide repeat-containing protein At1g77360, mitochondrial [Cucumis sa...	[more]
KAG7024721.1	2.8e-243	86.57	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG6591855.1	2.8e-243	86.21	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of ClCG11G016170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVX2	3.0e-51	28.84	Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop...	[more]
Q9C9A2	6.1e-44	27.93	Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop...	[more]
Q9LZP3	2.3e-35	25.17	Pentatricopeptide repeat-containing protein At3g62470, mitochondrial OS=Arabidop...	[more]
Q3EAF8	5.2e-35	24.94	Pentatricopeptide repeat-containing protein At3g62540, mitochondrial OS=Arabidop...	[more]
Q9LEQ7	6.8e-35	24.94	Pentatricopeptide repeat-containing protein At5g14820, mitochondrial OS=Arabidop...	[more]

BLAST of ClCG11G016170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UDH9	6.0e-252	89.32	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0L064	8.4e-246	87.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G242870 PE=4 SV=1	[more]
A0A6J1IPL0	1.3e-243	86.21	pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cuc...	[more]
A0A6J1F937	3.9e-243	86.21	pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Cuc...	[more]
A0A6J1CG53	1.1e-242	85.89	pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like OS=Mom...	[more]

BLAST of ClCG11G016170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77360.1	2.2e-52	28.84	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G71060.1	4.4e-45	27.93	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G62470.1	1.7e-36	25.17	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G62540.1	3.7e-36	24.94	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G14820.1	4.8e-36	24.94	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 376..424 e-value: 2.3E-10 score: 40.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 310..339 e-value: 0.0084 score: 16.3 coord: 203..229 e-value: 0.037 score: 14.3 coord: 274..300 e-value: 0.15 score: 12.4 coord: 168..196 e-value: 0.05 score: 13.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 310..341 e-value: 5.0E-5 score: 21.2 coord: 379..412 e-value: 0.0012 score: 16.8 coord: 415..447 e-value: 1.2E-7 score: 29.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 412..446 score: 11.772493
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 270..305 score: 8.6266
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 377..411 score: 9.656963
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 307..341 score: 10.906551
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 351..548 e-value: 9.2E-31 score: 109.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 251..350 e-value: 3.1E-15 score: 57.9 coord: 118..250 e-value: 6.0E-17 score: 63.6
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 211..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..91
None	No IPR available	PANTHER	PTHR47942:SF28	OSJNBA0019D11.15 PROTEIN	coord: 85..549
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 85..549

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G016170.1	ClCG11G016170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006898	receptor-mediated endocytosis
cellular_component	GO:0030124	AP-4 adaptor complex
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0140312	cargo adaptor activity
molecular_function	GO:0005515	protein binding