ClCG11G015290 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAGAAAATGGGAAGACCCACAAGGAGAAAACTTCAGTTCTCCCACTGATAATATTGAGCTCCACCTTGAAACTCCATTACCTTTGGAGTGGCAACGATGTCTGGATCTTCAGGTACTAAACTTATTTTCACATGCAATAGTAAGCAATAGTTTTTAAGTGTCATGTAATCCTAGTTTTATGTACATAAACACTATACTATCCTCTTATTTTCTCCACTTTATCACCTTTTTGTTACAAAGTCAGGAGAGATACATTTCTATAACACAAAGACTCAAAAAAGAACCTCAATGGATCCAAGAAGAAAATTAGAGAGTCCTACTCATTATAGAAGCCTTGGAGGTGAGGCCTTGAGTTTGGACCTTGAGCTCAATCTAAATTGCCAATCAAAGAAGAAAAGCAACGATGGGGTTATGGCTAGAGGTTTGATGAAACAAGCAAATGGGAGTTCTCCATGGCTAAGATTTGAAAGAGAGCAAAAAGAAATGGTTGCAAGAGTTTGCATGCAGTGTCATTTATTGGTTATGCTTTTGAAGTCCTCACCAACATGCCCAAATTGCAAATTCATACAACCAACAACAGATCACCTCCAAAAACCTCCAACTACAACAACCTTCTTTATACCTAATTCTCTCCCTACTGAGAATAATAATCAAACCCAATCCTTAAAGACTTTCTTCCCAAATCCTATTCAAAATAAAGTTTAG ATGAAGAGAAAATGGGAAGACCCACAAGGAGAAAACTTCAGTTCTCCCACTGATAATATTGAGCTCCACCTTGAAACTCCATTACCTTTGGAGTGGCAACGATGTCTGGATCTTCAGTCAGGAGAGATACATTTCTATAACACAAAGACTCAAAAAAGAACCTCAATGGATCCAAGAAGAAAATTAGAGAGTCCTACTCATTATAGAAGCCTTGGAGGTGAGGCCTTGAGTTTGGACCTTGAGCTCAATCTAAATTGCCAATCAAAGAAGAAAAGCAACGATGGGGTTATGGCTAGAGGTTTGATGAAACAAGCAAATGGGAGTTCTCCATGGCTAAGATTTGAAAGAGAGCAAAAAGAAATGGTTGCAAGAGTTTGCATGCAGTGTCATTTATTGGTTATGCTTTTGAAGTCCTCACCAACATGCCCAAATTGCAAATTCATACAACCAACAACAGATCACCTCCAAAAACCTCCAACTACAACAACCTTCTTTATACCTAATTCTCTCCCTACTGAGAATAATAATCAAACCCAATCCTTAAAGACTTTCTTCCCAAATCCTATTCAAAATAAAGTTTAG ATGAAGAGAAAATGGGAAGACCCACAAGGAGAAAACTTCAGTTCTCCCACTGATAATATTGAGCTCCACCTTGAAACTCCATTACCTTTGGAGTGGCAACGATGTCTGGATCTTCAGTCAGGAGAGATACATTTCTATAACACAAAGACTCAAAAAAGAACCTCAATGGATCCAAGAAGAAAATTAGAGAGTCCTACTCATTATAGAAGCCTTGGAGGTGAGGCCTTGAGTTTGGACCTTGAGCTCAATCTAAATTGCCAATCAAAGAAGAAAAGCAACGATGGGGTTATGGCTAGAGGTTTGATGAAACAAGCAAATGGGAGTTCTCCATGGCTAAGATTTGAAAGAGAGCAAAAAGAAATGGTTGCAAGAGTTTGCATGCAGTGTCATTTATTGGTTATGCTTTTGAAGTCCTCACCAACATGCCCAAATTGCAAATTCATACAACCAACAACAGATCACCTCCAAAAACCTCCAACTACAACAACCTTCTTTATACCTAATTCTCTCCCTACTGAGAATAATAATCAAACCCAATCCTTAAAGACTTTCTTCCCAAATCCTATTCAAAATAAAGTTTAG MKRKWEDPQGENFSSPTDNIELHLETPLPLEWQRCLDLQSGEIHFYNTKTQKRTSMDPRRKLESPTHYRSLGGEALSLDLELNLNCQSKKKSNDGVMARGLMKQANGSSPWLRFEREQKEMVARVCMQCHLLVMLLKSSPTCPNCKFIQPTTDHLQKPPTTTTFFIPNSLPTENNNQTQSLKTFFPNPIQNKV Homology
BLAST of ClCG11G015290 vs. NCBI nr
Match: XP_038899250.1 (uncharacterized protein LOC120086593 [Benincasa hispida]) HSP 1 Score: 343.6 bits (880), Expect = 1.1e-90 Identity = 174/196 (88.78%), Postives = 179/196 (91.33%), Query Frame = 0
BLAST of ClCG11G015290 vs. NCBI nr
Match: XP_008466035.2 (PREDICTED: uncharacterized protein LOC103503587 [Cucumis melo]) HSP 1 Score: 298.1 bits (762), Expect = 5.4e-77 Identity = 164/216 (75.93%), Postives = 174/216 (80.56%), Query Frame = 0
BLAST of ClCG11G015290 vs. NCBI nr
Match: XP_004136212.1 (uncharacterized protein LOC101215652 [Cucumis sativus] >KGN60337.1 hypothetical protein Csa_001758 [Cucumis sativus]) HSP 1 Score: 297.7 bits (761), Expect = 7.0e-77 Identity = 162/223 (72.65%), Postives = 176/223 (78.92%), Query Frame = 0
BLAST of ClCG11G015290 vs. NCBI nr
Match: KAG6591744.1 (hypothetical protein SDJN03_14090, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 290.0 bits (741), Expect = 1.5e-74 Identity = 156/203 (76.85%), Postives = 168/203 (82.76%), Query Frame = 0
BLAST of ClCG11G015290 vs. NCBI nr
Match: KAG7024627.1 (hypothetical protein SDJN02_13445 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 288.5 bits (737), Expect = 4.3e-74 Identity = 155/203 (76.35%), Postives = 168/203 (82.76%), Query Frame = 0
BLAST of ClCG11G015290 vs. ExPASy TrEMBL
Match: A0A1S3CQA1 (uncharacterized protein LOC103503587 OS=Cucumis melo OX=3656 GN=LOC103503587 PE=4 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 2.6e-77 Identity = 164/216 (75.93%), Postives = 174/216 (80.56%), Query Frame = 0
BLAST of ClCG11G015290 vs. ExPASy TrEMBL
Match: A0A0A0LHX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G895830 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 3.4e-77 Identity = 162/223 (72.65%), Postives = 176/223 (78.92%), Query Frame = 0
BLAST of ClCG11G015290 vs. ExPASy TrEMBL
Match: A0A6J1F8N8 (uncharacterized protein LOC111443136 OS=Cucurbita moschata OX=3662 GN=LOC111443136 PE=4 SV=1) HSP 1 Score: 285.8 bits (730), Expect = 1.3e-73 Identity = 154/203 (75.86%), Postives = 167/203 (82.27%), Query Frame = 0
BLAST of ClCG11G015290 vs. ExPASy TrEMBL
Match: A0A6J1IME5 (uncharacterized protein LOC111476564 OS=Cucurbita maxima OX=3661 GN=LOC111476564 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 5.6e-72 Identity = 152/203 (74.88%), Postives = 165/203 (81.28%), Query Frame = 0
BLAST of ClCG11G015290 vs. ExPASy TrEMBL
Match: A0A6J1FNU7 (uncharacterized protein LOC111445951 OS=Cucurbita moschata OX=3662 GN=LOC111445951 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 2.1e-55 Identity = 127/194 (65.46%), Postives = 141/194 (72.68%), Query Frame = 0
BLAST of ClCG11G015290 vs. TAIR 10
Match: AT1G78170.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22250.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 83.6 bits (205), Expect = 1.9e-16 Identity = 69/197 (35.03%), Postives = 92/197 (46.70%), Query Frame = 0
BLAST of ClCG11G015290 vs. TAIR 10
Match: AT4G08910.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78170.1); Has 68 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 59.7 bits (143), Expect = 3.0e-09 Identity = 25/38 (65.79%), Postives = 31/38 (81.58%), Query Frame = 0
BLAST of ClCG11G015290 vs. TAIR 10
Match: AT1G22250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78170.1); Has 64 Blast hits to 64 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.8 bits (133), Expect = 4.3e-08 Identity = 36/116 (31.03%), Postives = 52/116 (44.83%), Query Frame = 0
BLAST of ClCG11G015290 vs. TAIR 10
Match: AT2G33510.1 (CONTAINS InterPro DOMAIN/s: WW/Rsp5/WWP (InterPro:IPR001202); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28070.1); Has 3898 Blast hits to 1138 proteins in 179 species: Archae - 0; Bacteria - 40; Metazoa - 2353; Fungi - 242; Plants - 298; Viruses - 92; Other Eukaryotes - 873 (source: NCBI BLink). ) HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06 Identity = 34/127 (26.77%), Postives = 55/127 (43.31%), Query Frame = 0
BLAST of ClCG11G015290 vs. TAIR 10
Match: AT1G28070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits to 77 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 1.3e-04 Identity = 29/129 (22.48%), Postives = 60/129 (46.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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