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ClCG11G014990 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGACGTCGCGTGACTCGTGAGGGATAGTGGAAGCGGAATATCAAATTTGGCGATAGCTTCCATTTTGGTTCCGCCATTCGCAGTTGGATTGGAATGGGAAGTAAAGCTCTTCCTCTGCTCAAAGGAGCTTCATCATTCCCGTCGTTTAAGCGCCAATTCTTCATCTCTACCGCCTTGCATTCCCTACCTGTGTCTAACATCAGAGTTCGAAAATGTTCAACTGCTTCAGGAATCTTGGCCTCTCTTCAACCTCCCGATGTTCCTCGTTTAGCTGAAACAGCTCGAATTTCTCTCACTCCCACTCAGGTATGCAACGCCCTCACCTCCTTAATGTTTACTTCTCTTTCTTCAATCTCTTATCCACTAACGTCTGATTCTTATGTTCCGCTTTCTTGTCTAATTCAGGTTGAAGAATTTGCGCCTAAAATTAGACAAGTTGTTGACTGGTAAGTTCCTCTCTCTTTTCTCGCTCTCTCTTTCTCGCGCGCGCGCGCGCGCTCGCGCACATACACACAGACTCTCAGAAAGTAATAGACCTTGAAACACATTGGTATCTTGATGATGTTAGTGTATTATAACGCTGAAACCAAGAATACACGTACACTTTACGAGGTAAAAGTATGTGACCTAAGCGATGTGTTGAAGATTAAGATTAGAAGTCAGTGGCCTCTGTAGTAAAGGCCTAGAGTTAGTTATTGGAAATGTTGTCTTGTTTTCTTAGGTGAGACTGAGAAGTTGATTTTTGTTGGACGTAGGAGGTGGATTTTTGTCCTCCATTATTGTCTATGTTGGTATTTGGCCAGGCCTCTAGGTAAGTAAATTACGATGAGACAATTGCCTGTTATGCCCTAACCACTTAAGGATTCTTCACCAAGAGGTTGTATAATGAGATTCTATGATTTGGCATTTACTTCTCTCAACTGGAAAAAGAGATCGAAATCCATGCGAGATTGCATAATTTGTTAGGTTTACTTGTTCGACTGTGACTTTTAGGGAGATGTAAAAGGAACAAGAAAAAGCCAGGTAGTGGACAATTTCTCAAAGACAGAAGTTAAATTATTTGTCGTCTTTACAACCTTTTTTTATATTAACTTGGGGGTAAATGATAATCTCATTGGCGAATTGGACCATTGAAATGCAGGTCTGGTAGTTCTCCTTTTTTTTTTCTTTTTTTTTTTTTTCCTTTCCTCTCTCTCTCTGAAGTTAAGAATACTCAAAAGTCGGAACTTCCTCATGATGTTCATTGTTGATTTTTTTAACAATTTGTAAGCATGAAGCTCTTGGATCTAGAAGACCTACGAATTGGATAACTAGTCTTATTACATTGGAAAATCGAAGATACCCTTGTTTGTGGTACAAACATTCTATTAGCCTCTTACTCTCTTTCAAGTTACAACTCTTTATCAATGAAACTGTTTTCTATCCAAAAAGAAAGGGTTACAACTCTTTATCTGAAGGGAAAATCATCTCAAGCCTTTGATAATAGTAAGTAATCAGGTGGCCCAGGGGATAACAATCGATAATATATCATAATACACCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCAAAAAAAAAAAAAGAAAAAAAAAAGAAGCACTTAGTTTGCTTTTCTAGATATAGACCACCATATAAAATTTTATCATGTATGTTCGTCAACTGCCCAATTCAGTTGATAATAATCATCGATATCCATCATTTCTTCTTCAAACATTCAATAGAAGGGATTACGGAAGACAGACCCAATTATAATTAATAAGCTAGCATATAATCATTGTTAGGACAAATATGAGTGCACCAAGGTAAACCAAATTGAATGAAATAAATCCCAAACATCCTACTTGACTCCCATGACAGCATAAGATCAAACGACTGAATCTTTAGGAGTGAGGTTTGGTCACACAAAAGCTGTTCAATGCAGTGGGAAGGCTTCATTGGGAAGCACCCAGACAAATCAAAAGAGTTAAGGAGAATTCCAGATTTTTTGGAGAAAGGACAATGTAGGGAGAGATGACAACAATTTTGTTCATTTTCCTTATGGAGAGTGCACTGGCTTGAGAGAAGAGAGAATGTGGGGTTCCTTTTTTGAACCTTCGCAGAAATTTGAGCCTCCATGAGCCGGGGTCAATCCAAAAAGCTTGCCTTTCCGGATTCTTTCTTCATCTAAATAATCTTAATGAATGGCTTTGAAGGGACACCACCACATCTCCTTTATTGTTTAGGGAACTAGGAAGGTTGGAAAAAGAGGCAATTAGAATCCAAACTCCAACAGTGAACAGCCCTGTTTACTTAGGAATTCAAACATTTTCCAAAAGAAATGAAAGATCTATTCCCTCAAGAAGTTCTTATATTGCCTTCTGAACTTGAGGTTCCAACATTAGCCAGATTCCAGGGAATGATCCCTGACCCGGATGGAGTCAAAATTAGTGAGGTGGAAATTTTGGAAACATTCTTCTTTAGAGGTTGTGAGGTGTCCATTGATCTGAATTCTGACCAGAAGGAAATTGGGACACAATTATCGACATAACATTCATAATCACCTTCATCCTCTGTCTACCTTTAGCACTCGGCTGTTTTACCCTTCAGTTTCTACTAACTTTAATATGATAATATTATGTTTCAGGTTTGGGCAGCTCCAGACTGTTGATCTTCAAAGTATTGAACCATCCATTAGAGCAGGTGCATGCTATCACTCGTAGGAGTTCTTTGTTGTCAATCATTTTGCAAATTGTTTGTCGTTTTTCTTCTAGTATGCCTTTGCTTGTTTCACTGTTAAGTGTTGACTTCAAATCACACAAGTCTTTTCAAAATGGAAATTTTATATCAGACTCATTTTTTCATTGGACAGTAGTAATCATAAGACATGGAGGTATTGTCTTTTGTTGCCACGGAAACTAGTGAGATAATGAAGCACATTGAGGAGGGATAGCATCAATAGGATCCAAAACTTTGTTCTGTTTACTTGTGCTATCAATTGCTAGATAACTGATTACGACTTCAGAATTCCCAACCCTAACCACAGACGTTTATAAATGTTTCTGGAAGAGCATTCCAGGAGAGCATTTTGAGCATGGAATTTTTTTGAAGTGATCAAAATGCTAAAATCTCAAGTTGCTTTTTGTCAAGAGGATAGGCAAACAAGTGTAGTGTAGCAAAAATTAGTACTAATTTTCCTACTATTTACAGATACTGAAGGTGGTAATCAGCGGAATGACGTTCCTGAACCATTTGAAAATAGGTAACCTGGTTATTTTGCAATTTGGGCTATCCCAACATTTGGCAGGAAATTTTGTCATAATCTTTTTTCTTTTTTTGTCCCCAGAGAGGCCATGATTGGCGCAGTTCCAGTCTTTGATGAGCCGTATATCAAAGTTCCTAAAGTTCTGAATAAGGAGTAGTTGCTAAGGTTCGGTAGGTTGTTTCATCTGTTTCATCATTCATTATTGGCATGTTCCTCAACATCATATGTCGTTGAAATAATTAATTTTGCTACAGGTTACCAAATGATATTTGAATTACAATTCGAACTAAACATCCATTAATCTTAACCTTAGTTCAAATGTTTAATTCACACATTATTTTAATTTCACTCTAGTTATGGGGGCTGATTACCGCACATTCTAGTTATCACATCAGATGTTTATCCAAAAAATTGTCTGTTGCGAAAGAGACCTGTCCTCGTTATTGATCTTATCAACTCTCCTTTGAGAGATGATGGAGACAGATTCAGGTTAATTTAGCCCCATCATCTTAATCTAAATTATTCTATTTATCTAATTTAGGGGGTGTTTGATAAATGGATATGGGTATGGGTTGGGTTGGGTTGGGTGGGTATTTATTACCCATGTTTGTTAAGCCTATAAAGAAAAATGGTGGGTTTAGTAACCCACCGTTTTACCCCCTCAAAACTCACCTTAATAACTAGGTGAGTTTTATTTTCGGCCGTTTGATTTCCCATCTTCTCTCTTATTTCATTTTCCACCGTATTTCTCCCCTCTTCTCTCTTCTTTCTCGTCATTTTTCCTTCTCTCTACTTCTGATGCTTAGTTTCCTCCTCCATCTTCTACAATCTCCCACTGTTTGGTTTCTTCCCTCATTTTCTCTCTTATTTCGCTGTCCCTCTTTTGATTTTTTGGATTTCTTTTTTGATTTCTGTTTTTTTTCTTTCGGATTGCTGTTTTTTTTTTTTTATTTCTTCGATTTCTTTTTCGATTGCTGTTTTTTTTCGGATTTATGTTCTCTTTTTCTGAGAGAGAGAGAGAATGGAAAAAAGGAAAAAAATCAAAAAATCAACTGAAAAAATAGCAAAAAAAGCAAAAACAAAAAACAAAGAGCAAACAATAAAAAAAAATAGCAAAGAGGAAATAAATAAATAAATAGACAAACGAATAAAAATACAAATAAAGTAAAAAAAACAAACGAATAAAAATACAAATAAAGGAAAAAAAAAAAGGTACGAACAAATAGCAAAAAGAAAAAAAATTAAAAAGCAAACAGATAAAAATAGCAAAAGGAAAAACAAGCAAAAAAAAATAAAATAAAAAGGAAAAACAAGAAAAAAAAAAAAACTAATACCCAAACTCAACTTAGTACAACACCCCAAACACACCTAAACATACGGACTTTCTAACTCAACTCAAGTTAGCACAACAAACATAGACATTTCAACTCAATCCAACTCTGCCTCAAACACAAACAATTTAACTCTCCAGACAATCTAACTCCCCTTATAATTATTACCAACTCAATTCAACTATGTGCGACCAACTCCCCCTTATTCGTTCATCTACCTTTACATGAGGAAGAAAAAGAAACTGTCAAAATTTGTATCTTTGCAGGTATTTTCTTTTCAGACTTGTCTCTTATCCTTGGGATATTACAAGGCATGGCTTTGCTGGGTCCATCGGTTACCCTACGTATGAGGTGCAAATGCCCAATAAGAATATTGAGAATAATTATTATAAATATTTAGCAACATGATGCATCCTGTTAATTAATAAATTTTCTCTAGATGGTCTCCATAAAATAATCAAGA AAGACGTCGCGTGACTCGTGAGGGATAGTGGAAGCGGAATATCAAATTTGGCGATAGCTTCCATTTTGGTTCCGCCATTCGCAGTTGGATTGGAATGGGAAGTAAAGCTCTTCCTCTGCTCAAAGGAGCTTCATCATTCCCGTCGTTTAAGCGCCAATTCTTCATCTCTACCGCCTTGCATTCCCTACCTGTGTCTAACATCAGAGTTCGAAAATGTTCAACTGCTTCAGGAATCTTGGCCTCTCTTCAACCTCCCGATGTTCCTCGTTTAGCTGAAACAGCTCGAATTTCTCTCACTCCCACTCAGGTTGAAGAATTTGCGCCTAAAATTAGACAAGTTGTTGACTGGTTTGGGCAGCTCCAGACTGTTGATCTTCAAAGTATTGAACCATCCATTAGAGCAGATACTGAAGGTGGTAATCAGCGGAATGACGTTCCTGAACCATTTGAAAATAGAGAGGCCATGATTGGCGCAGTTCCAGTCTTTGATGAGCCGTATATCAAAGTTCCTAAAGTTCTGAATAAGGAGTAGTTGCTAAGGTTCGGTATTTTCTTTTCAGACTTGTCTCTTATCCTTGGGATATTACAAGGCATGGCTTTGCTGGGTCCATCGGTTACCCTACGTATGAGGTGCAAATGCCCAATAAGAATATTGAGAATAATTATTATAAATATTTAGCAACATGATGCATCCTGTTAATTAATAAATTTTCTCTAGATGGTCTCCATAAAATAATCAAGA ATGGGAAGTAAAGCTCTTCCTCTGCTCAAAGGAGCTTCATCATTCCCGTCGTTTAAGCGCCAATTCTTCATCTCTACCGCCTTGCATTCCCTACCTGTGTCTAACATCAGAGTTCGAAAATGTTCAACTGCTTCAGGAATCTTGGCCTCTCTTCAACCTCCCGATGTTCCTCGTTTAGCTGAAACAGCTCGAATTTCTCTCACTCCCACTCAGGTTGAAGAATTTGCGCCTAAAATTAGACAAGTTGTTGACTGGTTTGGGCAGCTCCAGACTGTTGATCTTCAAAGTATTGAACCATCCATTAGAGCAGATACTGAAGGTGGTAATCAGCGGAATGACGTTCCTGAACCATTTGAAAATAGAGAGGCCATGATTGGCGCAGTTCCAGTCTTTGATGAGCCGTATATCAAAGTTCCTAAAGTTCTGAATAAGGAGTAG MGSKALPLLKGASSFPSFKRQFFISTALHSLPVSNIRVRKCSTASGILASLQPPDVPRLAETARISLTPTQVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDVPEPFENREAMIGAVPVFDEPYIKVPKVLNKE Homology
BLAST of ClCG11G014990 vs. NCBI nr
Match: XP_008466091.1 (PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucumis melo] >KAA0038633.1 glutamyl-tRNA(Gln) amidotransferase subunit C [Cucumis melo var. makuwa] >TYK31232.1 glutamyl-tRNA(Gln) amidotransferase subunit C [Cucumis melo var. makuwa]) HSP 1 Score: 267.3 bits (682), Expect = 7.6e-68 Identity = 135/145 (93.10%), Postives = 138/145 (95.17%), Query Frame = 0
BLAST of ClCG11G014990 vs. NCBI nr
Match: XP_038897282.1 (glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Benincasa hispida] >XP_038897283.1 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Benincasa hispida]) HSP 1 Score: 260.4 bits (664), Expect = 9.3e-66 Identity = 132/145 (91.03%), Postives = 136/145 (93.79%), Query Frame = 0
BLAST of ClCG11G014990 vs. NCBI nr
Match: XP_004136231.1 (glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucumis sativus] >KGN60306.1 hypothetical protein Csa_001068 [Cucumis sativus]) HSP 1 Score: 259.6 bits (662), Expect = 1.6e-65 Identity = 131/145 (90.34%), Postives = 135/145 (93.10%), Query Frame = 0
BLAST of ClCG11G014990 vs. NCBI nr
Match: XP_023521629.1 (glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo] >XP_023521637.1 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 242.7 bits (618), Expect = 2.0e-60 Identity = 124/145 (85.52%), Postives = 131/145 (90.34%), Query Frame = 0
BLAST of ClCG11G014990 vs. NCBI nr
Match: XP_022941306.1 (glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucurbita moschata] >XP_022941307.1 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucurbita moschata] >KAG6608102.1 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 242.7 bits (618), Expect = 2.0e-60 Identity = 124/145 (85.52%), Postives = 131/145 (90.34%), Query Frame = 0
BLAST of ClCG11G014990 vs. ExPASy Swiss-Prot
Match: D7STK2 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Vitis vinifera OX=29760 GN=GATC PE=3 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 2.8e-41 Identity = 91/145 (62.76%), Postives = 108/145 (74.48%), Query Frame = 0
BLAST of ClCG11G014990 vs. ExPASy Swiss-Prot
Match: B9INH0 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Populus trichocarpa OX=3694 GN=GATC PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 4.3e-37 Identity = 89/145 (61.38%), Postives = 106/145 (73.10%), Query Frame = 0
BLAST of ClCG11G014990 vs. ExPASy Swiss-Prot
Match: B9RRX2 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Ricinus communis OX=3988 GN=GATC PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 4.3e-37 Identity = 87/146 (59.59%), Postives = 103/146 (70.55%), Query Frame = 0
BLAST of ClCG11G014990 vs. ExPASy Swiss-Prot
Match: A2XK57 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=GATC PE=3 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.4e-32 Identity = 67/97 (69.07%), Postives = 81/97 (83.51%), Query Frame = 0
BLAST of ClCG11G014990 vs. ExPASy Swiss-Prot
Match: Q7XZZ1 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=GATC PE=2 SV=1) HSP 1 Score: 139.8 bits (351), Expect = 2.4e-32 Identity = 67/97 (69.07%), Postives = 81/97 (83.51%), Query Frame = 0
BLAST of ClCG11G014990 vs. ExPASy TrEMBL
Match: A0A5A7T6R5 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=GATC PE=3 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 3.7e-68 Identity = 135/145 (93.10%), Postives = 138/145 (95.17%), Query Frame = 0
BLAST of ClCG11G014990 vs. ExPASy TrEMBL
Match: A0A1S3CQE8 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503618 PE=3 SV=1) HSP 1 Score: 267.3 bits (682), Expect = 3.7e-68 Identity = 135/145 (93.10%), Postives = 138/145 (95.17%), Query Frame = 0
BLAST of ClCG11G014990 vs. ExPASy TrEMBL
Match: A0A0A0LJU5 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Cucumis sativus OX=3659 GN=GATC PE=3 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 7.7e-66 Identity = 131/145 (90.34%), Postives = 135/145 (93.10%), Query Frame = 0
BLAST of ClCG11G014990 vs. ExPASy TrEMBL
Match: A0A6J1FM33 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111446647 PE=3 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 9.8e-61 Identity = 124/145 (85.52%), Postives = 131/145 (90.34%), Query Frame = 0
BLAST of ClCG11G014990 vs. ExPASy TrEMBL
Match: A0A6J1CQ90 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111013151 PE=3 SV=1) HSP 1 Score: 238.4 bits (607), Expect = 1.8e-59 Identity = 121/147 (82.31%), Postives = 130/147 (88.44%), Query Frame = 0
BLAST of ClCG11G014990 vs. TAIR 10
Match: AT4G32915.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of translational fidelity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glu-tRNAGln amidotransferase, C subunit (InterPro:IPR003837); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 135.2 bits (339), Expect = 4.2e-32 Identity = 61/111 (54.95%), Postives = 86/111 (77.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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