ClCG11G012930 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G012930
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Transcription termination factor MTERF5
Location	CG_Chr11: 26203866 .. 26204951 (+)
RNA-Seq Expression	ClCG11G012930
Synteny	ClCG11G012930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAAAATTTTTTCCACATCTATTCTTTATTTCATCCAAAAACGTTTCGTCAATACGGTTTCTAGTTCGACATTGCCATTAGGGTCTGTCTCCACGATCGAATTCCTCAAAAATTCTTGTGGGCTTGCCTGTCGAAACCTCCTAATCGATGAGAAAAACCCCCAGAAGTACGAAGCCATTATCAGTTTCTTCAAATTATATGGATTCGAGAATTCGCAGATCGCCAAGTTGGTCTCGTCGCGACCTGCTATCCTTCATTCGAGCGTATCCAAGAATCTGAAGCCTAAAATTGAGTTCCTCGAGGAAATTGGAATCGTGGGTCCTTTACTTCCTAAGGTAATTCTATCGAACCCTACGATTCTGTCCAGGAGCTTAAATCATCAGTTGAAACCATCATTTTGTTTCATAAAGGAAATGCTTGAATCGGATGAGAAAGTAATAGTTGTTATTCGTCGTGCTCCATGGCTTCTAACTTTTGATTTTAAGCGTATTATACAATCTAACATTGATGTTTTGGTCGGTGAAGGGGTACCTTCTAGGACTATAGCGAGATTGATTGTACTGCAGCCTAGAACTATTATGCAAAAGGTTGATAGAATAGTTTATGCAGTGAAAACAGTCAAGGAATTGGGCTTTGAACCAAAGGCTGGCATGTTTGTTCATGCACTTAGAGTAATGGTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTTGGATGGTCTGAGGAAGAGATTTTAACAGCATTTAAGAGACATCCACTTTGTTTAGCTTGTTCAGAGGAGAAAATGAGAGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGACCCAGGAACTTTAATTTCTTACCCTAAGTTCTTCGGGTATGGACTCAACAAGCGGCTCTGGCCGAGGTACAAAGTTTTCGAGGTTTTGAAGGTGAAAAATCTTATTAATAAGAATAAAAAGATTGCTCAGTTGTTTATGGAAGGGGAGAGAAGTTTTGTGGAGAATTATGTTCTTAAGCATTTGGATGAAATCCCAGATCTTATGGACATATACCGCGGCAATGCCGCAGCCTAA

mRNA sequence

ATGTCTAAAATTTTTTCCACATCTATTCTTTATTTCATCCAAAAACGTTTCGTCAATACGGTTTCTAGTTCGACATTGCCATTAGGGTCTGTCTCCACGATCGAATTCCTCAAAAATTCTTGTGGGCTTGCCTGTCGAAACCTCCTAATCGATGAGAAAAACCCCCAGAAGTACGAAGCCATTATCAGTTTCTTCAAATTATATGGATTCGAGAATTCGCAGATCGCCAAGTTGGTCTCGTCGCGACCTGCTATCCTTCATTCGAGCGTATCCAAGAATCTGAAGCCTAAAATTGAGTTCCTCGAGGAAATTGGAATCGTGGGTCCTTTACTTCCTAAGGTAATTCTATCGAACCCTACGATTCTGTCCAGGAGCTTAAATCATCAGTTGAAACCATCATTTTGTTTCATAAAGGAAATGCTTGAATCGGATGAGAAAGTAATAGTTGTTATTCGTCGTGCTCCATGGCTTCTAACTTTTGATTTTAAGCGTATTATACAATCTAACATTGATGTTTTGGTCGGTGAAGGGGTACCTTCTAGGACTATAGCGAGATTGATTGTACTGCAGCCTAGAACTATTATGCAAAAGGTTGATAGAATAGTTTATGCAGTGAAAACAGTCAAGGAATTGGGCTTTGAACCAAAGGCTGGCATGTTTGTTCATGCACTTAGAGTAATGGTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTTGGATGGTCTGAGGAAGAGATTTTAACAGCATTTAAGAGACATCCACTTTGTTTAGCTTGTTCAGAGGAGAAAATGAGAGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGACCCAGGAACTTTAATTTCTTACCCTAAGTTCTTCGGGTATGGACTCAACAAGCGGCTCTGGCCGAGGTACAAAGTTTTCGAGGTTTTGAAGGTGAAAAATCTTATTAATAAGAATAAAAAGATTGCTCAGTTGTTTATGGAAGGGGAGAGAAGTTTTGTGGAGAATTATGTTCTTAAGCATTTGGATGAAATCCCAGATCTTATGGACATATACCGCGGCAATGCCGCAGCCTAA

Coding sequence (CDS)

ATGTCTAAAATTTTTTCCACATCTATTCTTTATTTCATCCAAAAACGTTTCGTCAATACGGTTTCTAGTTCGACATTGCCATTAGGGTCTGTCTCCACGATCGAATTCCTCAAAAATTCTTGTGGGCTTGCCTGTCGAAACCTCCTAATCGATGAGAAAAACCCCCAGAAGTACGAAGCCATTATCAGTTTCTTCAAATTATATGGATTCGAGAATTCGCAGATCGCCAAGTTGGTCTCGTCGCGACCTGCTATCCTTCATTCGAGCGTATCCAAGAATCTGAAGCCTAAAATTGAGTTCCTCGAGGAAATTGGAATCGTGGGTCCTTTACTTCCTAAGGTAATTCTATCGAACCCTACGATTCTGTCCAGGAGCTTAAATCATCAGTTGAAACCATCATTTTGTTTCATAAAGGAAATGCTTGAATCGGATGAGAAAGTAATAGTTGTTATTCGTCGTGCTCCATGGCTTCTAACTTTTGATTTTAAGCGTATTATACAATCTAACATTGATGTTTTGGTCGGTGAAGGGGTACCTTCTAGGACTATAGCGAGATTGATTGTACTGCAGCCTAGAACTATTATGCAAAAGGTTGATAGAATAGTTTATGCAGTGAAAACAGTCAAGGAATTGGGCTTTGAACCAAAGGCTGGCATGTTTGTTCATGCACTTAGAGTAATGGTTTCAATGAATGATTCAACTTGGAAGAAGAAAATAAATGTTTTGAAGAGTTTTGGATGGTCTGAGGAAGAGATTTTAACAGCATTTAAGAGACATCCACTTTGTTTAGCTTGTTCAGAGGAGAAAATGAGAGATGTTGCAGATTTCTGTTTCAACACTGCAAAGTTGGACCCAGGAACTTTAATTTCTTACCCTAAGTTCTTCGGGTATGGACTCAACAAGCGGCTCTGGCCGAGGTACAAAGTTTTCGAGGTTTTGAAGGTGAAAAATCTTATTAATAAGAATAAAAAGATTGCTCAGTTGTTTATGGAAGGGGAGAGAAGTTTTGTGGAGAATTATGTTCTTAAGCATTTGGATGAAATCCCAGATCTTATGGACATATACCGCGGCAATGCCGCAGCCTAA

Protein sequence

MSKIFSTSILYFIQKRFVNTVSSSTLPLGSVSTIEFLKNSCGLACRNLLIDEKNPQKYEAIISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPKVILSNPTILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVLVGEGVPSRTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINVLKSFGWSEEEILTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFGYGLNKRLWPRYKVFEVLKVKNLINKNKKIAQLFMEGERSFVENYVLKHLDEIPDLMDIYRGNAAA

Homology

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BLAST of ClCG11G012930 vs. NCBI nr
Match: XP_038876362.1 (transcription termination factor MTERF5, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 557.4 bits (1435), Expect = 9.2e-155
Identity = 285/361 (78.95%), Postives = 311/361 (86.15%), Query Frame = 0


Query: 1   MSKIFSTSILYFIQKRFVNTVSSSTLPLGSVSTIEFLKNSCGLACRNLLIDEKNPQKYEA 60
           MSKI ST +LYFIQKRF+NTVSSSTLPL SVSTIEFLKNSCGLAC+ L IDEKN  KYEA
Sbjct: 1   MSKISSTFLLYFIQKRFLNTVSSSTLPLPSVSTIEFLKNSCGLACQTLQIDEKNSHKYEA 60

Query: 61  IISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPKVILSNPT 120
           II FFK +GF+NSQIAKLVS+RP +L S VS NLKPK EFLEEIGIVGPLLPKVILSNP 
Sbjct: 61  IIGFFKSHGFDNSQIAKLVSTRPWVLRSRVSNNLKPKFEFLEEIGIVGPLLPKVILSNPR 120

Query: 121 ILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVLVGEGVPS 180
           IL  SL+ QLKPSFCFIK +LESDE+V   I R+ WLLT DFK  +QSNI+VLV EGV S
Sbjct: 121 ILQTSLDSQLKPSFCFIKGILESDEQVTFAICRSSWLLTADFKGTMQSNINVLVREGVSS 180

Query: 181 RTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDSTWKKKIN 240
           R IA+LIVLQPR IMQKVDR+VYAVKTVKELG EP A MFVHA+RVMVSMNDSTWKKKIN
Sbjct: 181 RNIAKLIVLQPRAIMQKVDRMVYAVKTVKELGIEPNAHMFVHAVRVMVSMNDSTWKKKIN 240

Query: 241 VLKSFGWSEEEILTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFGYGLN 300
           VLKS GWSE+EI  AFKR PLCL CSEEKMRDVADFCFNTAKLDPGT+ISYPKFF   L+
Sbjct: 241 VLKSLGWSEKEIFAAFKRDPLCLVCSEEKMRDVADFCFNTAKLDPGTVISYPKFFMCALD 300

Query: 301 KRLWPRYKVFEVLKVKNLINKNKKIAQLFMEGERSFVENYVLKHLDEIPDLMDIYRGNAA 360
           KRL PRYKV EVLK KNL+ KNKKIA + ++GER+FVENYVLKHLD+IP LMD+YRGN A
Sbjct: 301 KRLRPRYKVVEVLKAKNLLKKNKKIAWVLLQGERNFVENYVLKHLDDIPYLMDMYRGNVA 360

Query: 361 A 362
           A
Sbjct: 361 A 361

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BLAST of ClCG11G012930 vs. NCBI nr
Match: XP_038892570.1 (transcription termination factor MTERF9, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 542.0 bits (1395), Expect = 4.0e-150
Identity = 279/361 (77.29%), Postives = 308/361 (85.32%), Query Frame = 0


Query: 1   MSKIFSTSILYFIQKRFVNTVSSSTLPLGSVSTIEFLKNSCGLACRNLLIDEKNPQKYEA 60
           M KI ST +LYFIQKRF++TVSSST+PL  VSTIEFLKNSCGLAC+ L IDEKN  KYEA
Sbjct: 31  MCKISSTFLLYFIQKRFLSTVSSSTIPLPFVSTIEFLKNSCGLACQTLQIDEKNSHKYEA 90

Query: 61  IISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPKVILSNPT 120
           II FF+ +GF+NSQIA LVS RP+IL S VS NLKPK+EFLEEIGIVGPLLPKVILSNP 
Sbjct: 91  IIGFFRSHGFDNSQIANLVSRRPSILQSRVSDNLKPKLEFLEEIGIVGPLLPKVILSNPR 150

Query: 121 ILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVLVGEGVPS 180
           IL  SL+ QLKPSFCFIK MLESDE+V   I R+ WLLT DFK I+QSNI+VLV EGV S
Sbjct: 151 ILQTSLDSQLKPSFCFIKRMLESDEQVTFAICRSSWLLTADFKGIMQSNINVLVSEGVSS 210

Query: 181 RTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDSTWKKKIN 240
           R IA+LIVLQPR IMQ VDR+VYAVKTVKELG EP A MFV+A++VMVSM DSTWKKKIN
Sbjct: 211 RNIAKLIVLQPRAIMQMVDRMVYAVKTVKELGIEPNAHMFVYAVKVMVSMKDSTWKKKIN 270

Query: 241 VLKSFGWSEEEILTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFGYGLN 300
           VLKS GWSE+EI  AFKR PLCLA SEEKMRDVADFC NTAKLDPGT+ISYPKFF   L+
Sbjct: 271 VLKSLGWSEKEIFAAFKREPLCLARSEEKMRDVADFCLNTAKLDPGTVISYPKFFMCALD 330

Query: 301 KRLWPRYKVFEVLKVKNLINKNKKIAQLFMEGERSFVENYVLKHLDEIPDLMDIYRGNAA 360
           KRL PRYKV EVLK KNL+ KNKKIA + ++GER+FVENY+LKHLDEIPDLMDIYRGN A
Sbjct: 331 KRLRPRYKVLEVLKAKNLL-KNKKIAWVLLQGERNFVENYILKHLDEIPDLMDIYRGNVA 390

Query: 361 A 362
           A
Sbjct: 391 A 390

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BLAST of ClCG11G012930 vs. NCBI nr
Match: XP_023529167.1 (transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527.7 bits (1358), Expect = 7.8e-146
Identity = 272/368 (73.91%), Postives = 306/368 (83.15%), Query Frame = 0


Query: 1   MSKIFSTSILYFIQKRFVNTVSSSTLPLGSVSTIEFLKNSCGL-------ACRNLLIDEK 60
           MSKI ST +LYFIQ RF+NT+S STLPL SVSTIEFLKNSCGL       A R L  DEK
Sbjct: 1   MSKISSTFLLYFIQNRFINTISGSTLPLASVSTIEFLKNSCGLATDSPSSALRKLQFDEK 60

Query: 61  NPQKYEAIISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPK 120
           + +KYEA+  F K YGFENSQIAKL++ RP+IL S VS NLKPK EFLEEIG VGPLLPK
Sbjct: 61  SAKKYEAVPRFLKSYGFENSQIAKLIAKRPSILQSRVSSNLKPKFEFLEEIGFVGPLLPK 120

Query: 121 VILSNPTILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVL 180
           VILSNPTIL R L+ QLKPSFCFIKEMLESDE+    IRR+ WLLTFDFK ++QSN++VL
Sbjct: 121 VILSNPTILQRGLDSQLKPSFCFIKEMLESDEQANFAIRRSSWLLTFDFKGVMQSNVNVL 180

Query: 181 VGEGVPSRTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSR I++LI  QPRTIMQKVDR+V AVK VKELG EP+  MFV ALRV++SMND+
Sbjct: 181 LGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSMNDT 240

Query: 241 TWKKKINVLKSFGWSEEEILTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINV KS GWSE+EILTAFKR P CLACSEEKMR VADFCFN AKLDP T+ISYP 
Sbjct: 241 TWKKKINVFKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVISYPT 300

Query: 301 FFGYGLNKRLWPRYKVFEVLKVKNLINKNKKIAQLFMEGERSFVENYVLKHLDEIPDLMD 360
           FF  GL+KRL PR+KV EVLKVK LI +N+KIA+L + GER FV+NYVLKHLDE+PDLMD
Sbjct: 301 FFMSGLDKRLRPRFKVVEVLKVKKLI-ENRKIARLLVLGERIFVKNYVLKHLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           IYRGNAAA
Sbjct: 361 IYRGNAAA 367

[Close]

BLAST of ClCG11G012930 vs. NCBI nr
Match: KAG6601090.1 (Transcription termination factor MTERF9, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 521.5 bits (1342), Expect = 5.6e-144
Identity = 267/368 (72.55%), Postives = 303/368 (82.34%), Query Frame = 0


Query: 1   MSKIFSTSILYFIQKRFVNTVSSSTLPLGSVSTIEFLKNSCGL-------ACRNLLIDEK 60
           MSKI ST +LYFIQ RF+NTVS STLPL SVSTIEFL+NSCGL       A R L  DEK
Sbjct: 1   MSKISSTFLLYFIQNRFINTVSGSTLPLASVSTIEFLENSCGLATDSPSSALRKLQFDEK 60

Query: 61  NPQKYEAIISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPK 120
           + +KYEA++ F K YGFENSQI KL++ RP+IL S VS NLKPK EFLEEIG  GPLLPK
Sbjct: 61  SARKYEAVLGFLKSYGFENSQIVKLIAKRPSILQSRVSSNLKPKFEFLEEIGFFGPLLPK 120

Query: 121 VILSNPTILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVL 180
           VILSNP IL R L+ QLKPSFCFIKEMLESDE+    IRR+ WLLTFDFK ++QSN++VL
Sbjct: 121 VILSNPAILQRGLDSQLKPSFCFIKEMLESDEQANFAIRRSSWLLTFDFKGVMQSNVNVL 180

Query: 181 VGEGVPSRTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSR I++LI  QPRTIMQKVDR+V AVK VKELG EP+  MFV ALRV++SMND+
Sbjct: 181 LGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSMNDT 240

Query: 241 TWKKKINVLKSFGWSEEEILTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINV KS GWSE+EILTAFKR P CLACSEEKMR VADFCFN AKLDP T+IS+P 
Sbjct: 241 TWKKKINVFKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVISHPT 300

Query: 301 FFGYGLNKRLWPRYKVFEVLKVKNLINKNKKIAQLFMEGERSFVENYVLKHLDEIPDLMD 360
           FF  GL+KRL PR+KV EVLKVK LI +N+KIA+L + GER FV+NYVLKHLDE+PDLMD
Sbjct: 301 FFMSGLDKRLRPRFKVVEVLKVKKLI-ENRKIARLLVVGERIFVKNYVLKHLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           IYRGNA A
Sbjct: 361 IYRGNATA 367

[Close]

BLAST of ClCG11G012930 vs. NCBI nr
Match: XP_022983916.1 (transcription termination factor MTERF9, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 520.4 bits (1339), Expect = 1.2e-143
Identity = 270/368 (73.37%), Postives = 304/368 (82.61%), Query Frame = 0


Query: 1   MSKIFSTSILYFIQKRFVNTVSSSTLPLGSVSTIEFLKNSCGLAC-------RNLLIDEK 60
           MSKI ST +LYFIQ RF+NTVSSSTLPL SVSTIEFLKNSCGLA        R L  DEK
Sbjct: 1   MSKISSTFLLYFIQNRFINTVSSSTLPLASVSTIEFLKNSCGLAADSPFSAGRKLQFDEK 60

Query: 61  NPQKYEAIISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPK 120
           + +KYEA++ F K YGFENSQIAKL++ +P+IL S V  NLKPK EFL++IG VGPLLPK
Sbjct: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLKDIGFVGPLLPK 120

Query: 121 VILSNPTILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVL 180
           VILSNP IL R L+  LKPSFCFIKEMLESDE+  V IRR+ WLLT  FK ++QSN++VL
Sbjct: 121 VILSNPGILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSSFKGVMQSNVNVL 180

Query: 181 VGEGVPSRTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSR I++LI LQPRTIMQKVDR+V AVK VKELG EP   MFVHALRV+VS++D+
Sbjct: 181 LGEGVPSRNISKLIGLQPRTIMQKVDRMVCAVKKVKELGIEPHTRMFVHALRVVVSISDT 240

Query: 241 TWKKKINVLKSFGWSEEEILTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINVLKS GWSE+EILTAFKR P CLACSEEKMR VADFC NTAKLDP T+ISYPK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCLNTAKLDPETVISYPK 300

Query: 301 FFGYGLNKRLWPRYKVFEVLKVKNLINKNKKIAQLFMEGERSFVENYVLKHLDEIPDLMD 360
           FF  GL+K L PR+KV EVLKVK LI KN+KIA L   GER+FV NYVLKHLDE+PDLMD
Sbjct: 301 FFMSGLDKCLRPRFKVLEVLKVKKLI-KNRKIAWLLFLGERNFVTNYVLKHLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           IYRGNAAA
Sbjct: 361 IYRGNAAA 367

[Close]

BLAST of ClCG11G012930 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.3e-13
Identity = 61/256 (23.83%), Postives = 116/256 (45.31%), Query Frame = 0


Query: 69  GFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPKVILSNPTILSRSLNH 128
           G    QI  +     A  + S+   +KP +EFL ++GI    +P ++   P I   SL  
Sbjct: 207 GLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICGISLTD 266

Query: 129 QLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVLVGEGVPSRTIARLIV 188
            LKP+  F++ +     +   +I R P +LT+  ++ + S ++ L   G+    I R++ 
Sbjct: 267 NLKPTMAFLETLGIDKNQWAKIISRFPAILTYS-RQKLTSTVEFLSQTGLTEEQIGRILT 326

Query: 189 LQPRTIMQKV-DRIVYAVKTVKELGFEPKAGMFVHALRVMVSMN-DSTWKKKINVLKSFG 248
             P  +   V D++   ++  + L  +    + +H       ++ +S  K         G
Sbjct: 327 RCPNIMSYSVEDKLRPTMEYFRSLNVD--VAVLLHRCPQTFGLSIESNLKPVTEFFLEKG 386

Query: 249 WSEEEILTAFKRHPLCLACS-EEKMRDVADFCFNTAKLDPGTLISYPKFFGYGLNKRLWP 308
           +  +EI     R+      S +E +    D+ F T       L+ +P+FFGY L +R+ P
Sbjct: 387 FGLDEIGIMISRYGALYTFSLKENVMPKWDY-FQTMDYPKSELVKFPQFFGYSLQERIKP 446

Query: 309 RYKVFEVLKVKNLINK 322
           RY++ +   V+ L+N+
Sbjct: 447 RYELVQRSGVRLLLNQ 458

[Close]

BLAST of ClCG11G012930 vs. ExPASy Swiss-Prot
Match: Q9ZT96 (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.5e-10
Identity = 60/287 (20.91%), Postives = 115/287 (40.07%), Query Frame = 0


Query: 61  IISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPKVILSNPT 120
           ++ +    G   S   + +   P +LHSSV  +L P +++L+ + I    +P+V+   P 
Sbjct: 182 VLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVIDLAPVVKYLQGLDIKPSDVPRVLERYPE 241

Query: 121 ILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVLVGEGVPS 180
           +L   L   +  S  ++  +  +  ++  ++ R P +L     RII+  ++ L   G+P 
Sbjct: 242 VLGFKLEGTMSTSVAYLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPR 301

Query: 181 RTIARLIVLQPRTIMQKVD---------------------RIVYAVKTVKELGFEPK--- 240
              ARLI  +P  +  ++D                      I+     +  +  +PK   
Sbjct: 302 LAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDT 361

Query: 241 ---------------AGMFVHALRVMVSMNDSTWKKKINVLKSFGWSEEEILTAFKRHPL 300
                           G  +  +   VS+++S   K I+ L   G+S ++        P 
Sbjct: 362 QRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCPQ 421

Query: 301 CLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFGYGLNKRLWPRYK 309
            LA +   M+   ++     K     L+ +P FF YGL   + PR+K
Sbjct: 422 VLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHK 468

[Close]

BLAST of ClCG11G012930 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.5e-09
Identity = 53/266 (19.92%), Postives = 112/266 (42.11%), Query Frame = 0


Query: 56  QKYEAIISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPKVI 115
           Q  E  I++ K +G    ++ +L++ +P ++  S+ +  KP +++   +GI    + +++
Sbjct: 350 QVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRIL 409

Query: 116 LSNPTILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFD-FKRIIQSNIDVLV 175
           +  P +    L   + P   F++EM   +E +  ++ + P LLT   +K+I    I +L 
Sbjct: 410 VVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLT 469

Query: 176 GEGVPSRTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDST 235
             GV  + I ++I + P  +   +       K    + +    G+  + L  M++     
Sbjct: 470 RAGVTQKDIGKVIAMDPALLGCSI-----GTKLEPNMRYYISLGIRFYQLGEMIA----- 529

Query: 236 WKKKINVLKSFGWSEEEILTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPKF 295
                                    P+ L  + + +R    +   T       LI +P+F
Sbjct: 530 -----------------------DFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFPRF 578

Query: 296 FGYGLNKRLWPRYKVFEVLKVKNLIN 321
           F Y L +R+ PR+ +     V+N +N
Sbjct: 590 FSYSLERRIIPRHTIM----VENRVN 578

[Close]

BLAST of ClCG11G012930 vs. ExPASy Swiss-Prot
Match: Q9SZL6 (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-08
Identity = 36/145 (24.83%), Postives = 77/145 (53.10%), Query Frame = 0


Query: 56  QKYEAIISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGI-VGPLLPKV 115
           +K   +++FF+  G   +Q+ K++   P ++  S+   L   + FL  +G+    ++ KV
Sbjct: 112 EKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKV 171

Query: 116 ILSNPTILSRSLNHQLKPSFCFIKEMLE-SDEKVIVVIRRAPWLLTFDFKRIIQSNIDVL 175
           ++ NP ++  S++ +L+P+  F+K  +  S++ +  V+   P LL  D  +I++ N D L
Sbjct: 172 LVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYL 231

Query: 176 VGEGVPSRTIARLIVLQPRTIMQKV 199
              G     IA ++   P+ +++ V
Sbjct: 232 KECGFGDSQIATMVTGYPQILIKSV 256

[Close]

BLAST of ClCG11G012930 vs. ExPASy Swiss-Prot
Match: Q9C6A1 (Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF15 PE=2 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.3e-07
Identity = 63/290 (21.72%), Postives = 112/290 (38.62%), Query Frame = 0


Query: 55  PQKYEAIISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPKV 114
           P K+   +   K  GF +S +++++SS P +L  +    ++ KIEFL  IGI    + + 
Sbjct: 144 PDKFNECVRVLKSLGFCDSTVSRILSSFPGVLLVN-EIEIRRKIEFLVGIGIARDNIERF 203

Query: 115 ILSNPTILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVLV 174
               P +L      +LKP      +M  S + V   I R P +L  +             
Sbjct: 204 FHVFPEVLGIGTETRLKPLLDEFMKMGFSKDDVKKEIAREPRVLGLEL------------ 263

Query: 175 GEGVPSRTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDST 234
             G   R +  +  L+ R +++        V  + E  F  +AG  V             
Sbjct: 264 --GELPRCLELINTLKCREVIR--------VSIISEGAF--RAGFEV------------- 323

Query: 235 WKKKINVLKSFGWSEEEILTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPKF 294
            K +++ L  +G    +      + P  +    E +    +F  N        L   P++
Sbjct: 324 -KLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEY 383

Query: 295 FGYGLNKRLWPRYKVFEVLKVKNLINKNKKIAQLFMEGERSFVENYVLKH 345
            G  L K++ PRY V + LK+K  +  +  +  L     + F   YV+ +
Sbjct: 384 LGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPY 394

[Close]

BLAST of ClCG11G012930 vs. ExPASy TrEMBL
Match: A0A6J1J3P9 (transcription termination factor MTERF9, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482390 PE=3 SV=1)

HSP 1 Score: 520.4 bits (1339), Expect = 6.0e-144
Identity = 270/368 (73.37%), Postives = 304/368 (82.61%), Query Frame = 0


Query: 1   MSKIFSTSILYFIQKRFVNTVSSSTLPLGSVSTIEFLKNSCGLAC-------RNLLIDEK 60
           MSKI ST +LYFIQ RF+NTVSSSTLPL SVSTIEFLKNSCGLA        R L  DEK
Sbjct: 1   MSKISSTFLLYFIQNRFINTVSSSTLPLASVSTIEFLKNSCGLAADSPFSAGRKLQFDEK 60

Query: 61  NPQKYEAIISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPK 120
           + +KYEA++ F K YGFENSQIAKL++ +P+IL S V  NLKPK EFL++IG VGPLLPK
Sbjct: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLKDIGFVGPLLPK 120

Query: 121 VILSNPTILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVL 180
           VILSNP IL R L+  LKPSFCFIKEMLESDE+  V IRR+ WLLT  FK ++QSN++VL
Sbjct: 121 VILSNPGILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSSFKGVMQSNVNVL 180

Query: 181 VGEGVPSRTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSR I++LI LQPRTIMQKVDR+V AVK VKELG EP   MFVHALRV+VS++D+
Sbjct: 181 LGEGVPSRNISKLIGLQPRTIMQKVDRMVCAVKKVKELGIEPHTRMFVHALRVVVSISDT 240

Query: 241 TWKKKINVLKSFGWSEEEILTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINVLKS GWSE+EILTAFKR P CLACSEEKMR VADFC NTAKLDP T+ISYPK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCLNTAKLDPETVISYPK 300

Query: 301 FFGYGLNKRLWPRYKVFEVLKVKNLINKNKKIAQLFMEGERSFVENYVLKHLDEIPDLMD 360
           FF  GL+K L PR+KV EVLKVK LI KN+KIA L   GER+FV NYVLKHLDE+PDLMD
Sbjct: 301 FFMSGLDKCLRPRFKVLEVLKVKKLI-KNRKIAWLLFLGERNFVTNYVLKHLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           IYRGNAAA
Sbjct: 361 IYRGNAAA 367

[Close]

BLAST of ClCG11G012930 vs. ExPASy TrEMBL
Match: A0A6J1GYF2 (transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458616 PE=3 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 2.3e-143
Identity = 267/368 (72.55%), Postives = 303/368 (82.34%), Query Frame = 0


Query: 1   MSKIFSTSILYFIQKRFVNTVSSSTLPLGSVSTIEFLKNSCGL-------ACRNLLIDEK 60
           MSKI ST +LYFIQ RF+NTVS STLPL SVSTIEFLKNSCGL       A R L  DEK
Sbjct: 1   MSKISSTFLLYFIQNRFINTVSGSTLPLASVSTIEFLKNSCGLATDSPSSALRKLQFDEK 60

Query: 61  NPQKYEAIISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPK 120
           + +KYEA++ F K YGFENSQIAKL++ R +IL S VS NLKPK EFLEEIG VGPLLPK
Sbjct: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKRSSILQSRVSSNLKPKFEFLEEIGFVGPLLPK 120

Query: 121 VILSNPTILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVL 180
           VILSNP IL R L+  LKPSFCFIKEMLESDE+    IRR+ WLLT +FK ++QSN++VL
Sbjct: 121 VILSNPAILQRGLDSHLKPSFCFIKEMLESDEQANFAIRRSSWLLTSNFKGVMQSNVNVL 180

Query: 181 VGEGVPSRTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSR I++LI  QPRTIMQKVDR+V AVK VKELG EP+  MFV ALRV++SMND+
Sbjct: 181 LGEGVPSRNISKLIAQQPRTIMQKVDRMVCAVKKVKELGIEPQTRMFVRALRVVLSMNDT 240

Query: 241 TWKKKINVLKSFGWSEEEILTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINVLKS GWSE+EILTAFKR P CLACSEEKMR VADFCFN AKLDP T+ISYP 
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCFNAAKLDPETVISYPT 300

Query: 301 FFGYGLNKRLWPRYKVFEVLKVKNLINKNKKIAQLFMEGERSFVENYVLKHLDEIPDLMD 360
           FF  GL+KRL PR+KV EVLKVK LI +N+KIA+L + GER FV+NYVLKHLDE+PDLM+
Sbjct: 301 FFMSGLDKRLRPRFKVVEVLKVKKLI-ENRKIARLLVVGERIFVKNYVLKHLDEVPDLME 360

Query: 361 IYRGNAAA 362
           IYRGNA A
Sbjct: 361 IYRGNATA 367

[Close]

BLAST of ClCG11G012930 vs. ExPASy TrEMBL
Match: A0A6J1GYC4 (transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458617 PE=3 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 5.7e-142
Identity = 270/368 (73.37%), Postives = 299/368 (81.25%), Query Frame = 0


Query: 1   MSKIFSTSILYFIQKRFVNTVSSSTLPLGSVSTIEFLKNSCGL-------ACRNLLIDEK 60
           MSKI S  +LYFIQ RFVNTVSSSTLPL SVSTIEFLKNSCGL       A R L  DEK
Sbjct: 1   MSKISSKFLLYFIQNRFVNTVSSSTLPLASVSTIEFLKNSCGLATDSPSSALRKLQFDEK 60

Query: 61  NPQKYEAIISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPK 120
           + +KYEA+  F K YGFENSQIAKL++ RP+IL S VS NLKPK EFLEEIG VGPLLPK
Sbjct: 61  SAKKYEAVPRFLKSYGFENSQIAKLIAKRPSILQSRVSSNLKPKFEFLEEIGFVGPLLPK 120

Query: 121 VILSNPTILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVL 180
           VILSNP IL R L+  LKPSFCFIKEMLESDE+    IRR  WLLT + K ++QSN++VL
Sbjct: 121 VILSNPAILQRGLDSHLKPSFCFIKEMLESDEQANFAIRRFSWLLTSNLKGVMQSNVNVL 180

Query: 181 VGEGVPSRTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDS 240
           + EGVPSR I++LI LQPRTI+QKVDR+V AVK VKELG EP   MFVHALRV+VS++D+
Sbjct: 181 LSEGVPSRNISKLIRLQPRTILQKVDRMVCAVKKVKELGIEPHTRMFVHALRVVVSISDT 240

Query: 241 TWKKKINVLKSFGWSEEEILTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINVLKS GWSE+EILTAFKR P CLACSEEKMR VADFC NTAKLDP T+ISYPK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKRDPYCLACSEEKMRAVADFCLNTAKLDPETVISYPK 300

Query: 301 FFGYGLNKRLWPRYKVFEVLKVKNLINKNKKIAQLFMEGERSFVENYVLKHLDEIPDLMD 360
           FF  GL+K L PR+KV EVLKVK LI KN KIA L   GER+FV NYVLKHLDE+PDLMD
Sbjct: 301 FFMSGLDKCLRPRFKVVEVLKVKKLI-KNTKIAWLLFLGERNFVTNYVLKHLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           IYRGNAAA
Sbjct: 361 IYRGNAAA 367

[Close]

BLAST of ClCG11G012930 vs. ExPASy TrEMBL
Match: A0A6J1J774 (transcription termination factor MTERF9, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482382 PE=3 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.8e-140
Identity = 265/368 (72.01%), Postives = 300/368 (81.52%), Query Frame = 0


Query: 1   MSKIFSTSILYFIQKRFVNTVSSSTLPLGSVSTIEFLKNSCGLAC-------RNLLIDEK 60
           MSKI S  +LYFIQ RFVNTVSSSTLP  SVSTIEFLKN+CGLA        R L  DEK
Sbjct: 1   MSKISSKFLLYFIQNRFVNTVSSSTLPSASVSTIEFLKNTCGLAADSPSSAGRKLQFDEK 60

Query: 61  NPQKYEAIISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPK 120
           + +KYEA++ F K YGFENSQIAKL++ +P+IL S V  NLKPK EFLE+IG VGPLL K
Sbjct: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVYNNLKPKFEFLEDIGFVGPLLAK 120

Query: 121 VILSNPTILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVL 180
           VIL NP+IL R L+  LKPSFCFIKEMLESDE+  V IRR+ WLLT + K ++QSN++VL
Sbjct: 121 VILLNPSILLRGLDSHLKPSFCFIKEMLESDEQANVAIRRSSWLLTSNLKGVMQSNVNVL 180

Query: 181 VGEGVPSRTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSR I++LI  QPRTIMQKVDR+V AVK VKELG EP+  MFV ALRV++SMND+
Sbjct: 181 LGEGVPSRNISKLIGQQPRTIMQKVDRMVCAVKKVKELGVEPQTRMFVRALRVVLSMNDT 240

Query: 241 TWKKKINVLKSFGWSEEEILTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINVLKS GWSE+EILTAFKR PLCLACSEEKMR  ADFC NTAKLDP T+ISYPK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKRDPLCLACSEEKMRAAADFCLNTAKLDPETVISYPK 300

Query: 301 FFGYGLNKRLWPRYKVFEVLKVKNLINKNKKIAQLFMEGERSFVENYVLKHLDEIPDLMD 360
           FF YGL+K L PR+KV EVLKVK LI KN+KIA L   GER FV NYVLK+LDE+PDLMD
Sbjct: 301 FFMYGLDKWLRPRFKVLEVLKVKKLI-KNRKIAWLLFLGEREFVTNYVLKYLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           IYRGNAAA
Sbjct: 361 IYRGNAAA 367

[Close]

BLAST of ClCG11G012930 vs. ExPASy TrEMBL
Match: A0A6J1GZE2 (transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458618 PE=3 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 2.7e-136
Identity = 258/368 (70.11%), Postives = 296/368 (80.43%), Query Frame = 0


Query: 1   MSKIFSTSILYFIQKRFVNTVSSSTLPLGSVSTIEFLKNSCGL-------ACRNLLIDEK 60
           MSKI S  +LYFIQ RFVNT SSSTLP  SVSTIEFLKNSCGL       A R L  DEK
Sbjct: 1   MSKISSKFLLYFIQNRFVNTASSSTLPSASVSTIEFLKNSCGLAPGSPSSAGRKLQFDEK 60

Query: 61  NPQKYEAIISFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPK 120
           + +KYEA++ F K YGFENSQIAKL++ +P+IL S V  NLKPK EFLE+IG VGPLLPK
Sbjct: 61  SAKKYEAVLGFLKSYGFENSQIAKLIAKQPSILQSRVCNNLKPKFEFLEDIGFVGPLLPK 120

Query: 121 VILSNPTILSRSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVL 180
           VIL +P+IL R L+  LKPSFCFIKEML SDE+  V I R+ WLLT + K ++QSN++VL
Sbjct: 121 VILLDPSILQRGLDSHLKPSFCFIKEMLGSDEQANVAILRSSWLLTSNLKGVMQSNVNVL 180

Query: 181 VGEGVPSRTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDS 240
           +GEGVPSR I++LI  QPRTIM KVDR+V AVK +KELG EP+  MFV ALRV++SMND+
Sbjct: 181 LGEGVPSRNISKLIGQQPRTIMHKVDRVVCAVKKIKELGIEPQTCMFVRALRVVMSMNDT 240

Query: 241 TWKKKINVLKSFGWSEEEILTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 300
           TWKKKINVLKS GWSE+EILTAFK+ P CLACSEEKMR VADFC NTAKLDP T+IS PK
Sbjct: 241 TWKKKINVLKSLGWSEKEILTAFKKDPYCLACSEEKMRAVADFCLNTAKLDPETVISNPK 300

Query: 301 FFGYGLNKRLWPRYKVFEVLKVKNLINKNKKIAQLFMEGERSFVENYVLKHLDEIPDLMD 360
           FF YGL+K L PR+KV EVLKVK LI KN KIA L +  ER FV+NYVLKHLDE+PDLMD
Sbjct: 301 FFMYGLDKWLRPRFKVVEVLKVKKLI-KNTKIAWLLLLDERIFVKNYVLKHLDEVPDLMD 360

Query: 361 IYRGNAAA 362
           I+RGNAAA
Sbjct: 361 IFRGNAAA 367

[Close]

BLAST of ClCG11G012930 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-56
Identity = 114/333 (34.23%), Postives = 188/333 (56.46%), Query Frame = 0


Query: 33  TIEFLKNSCGL-------ACRNLLIDEKNPQKYEAIISFFKLYGFENSQIAKLVSSRPAI 92
           T+ +L +SCGL       A R LL+D  +P++   +++  + +GF  +QI+ LV  RP +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLD--SPERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LHSSVSKNLKPKIEFLEEIGIVGPLLPKVILSNPTILSRSLNHQLKPSFCFIKEMLESDE 152
           L ++    L PK+ F   IG+   LL + + S+PTIL+RSL +QL PS+ F+K +L+SDE
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 KVIVVIRRAPWLLTFDFKRIIQSNIDVLVGEGVPSRTIARLIVLQPRTIMQKVDRIVYAV 212
           K++  +RR  W+   D  + +  NI+ +   GVP + I  L+   P  +MQK        
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 KTVKELGFEPKAGMFVHALRVMVSM-NDSTWKKKINVLKSFGWSEEEILTAFKRHPLCLA 272
           K  +E+GF P+   FV A+  +    N S W K   V + +GWSE++I+ AFK+HP C+ 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEEKMRDVADFCFNTAKLDPGTLISYPKFFGYGLNKRLWPRYKVFEVLKVKNLINKNKK 332
            SE K+    ++  N   + P ++   P    + L KR+ PR  V +VL    L+ ++  
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 IAQLFMEGERSFVENYVLKHLDEIPDLMDIYRG 358
           +  L +  E+ F+E  V+K+ +E+P+LM++Y G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]

BLAST of ClCG11G012930 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 160.6 bits (405), Expect = 2.3e-39
Identity = 90/332 (27.11%), Postives = 163/332 (49.10%), Query Frame = 0


Query: 33  TIEFLKNSCGLACRNLLIDEK-----NPQKYEAIISFFKLYGFENSQIAKLVSSRPAILH 92
           T+ +L +SCGL+  +   + +     + +K +++++ FK +GF N QI  ++ S P +L 
Sbjct: 58  TVSYLVDSCGLSLESAKSNSRFVKLVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLS 117

Query: 93  SSVSKNLKPKIEFLEEIGIVGPLLPKVILSNPTILSRSLNHQLKPSFCFIKEMLESDEKV 152
            S    + PK+ F   IG       K+I S+P +LS SL+ +L P +  +K +L  +E V
Sbjct: 118 LSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESV 177

Query: 153 IVVIRRAPWLLTFDFKRIIQSNIDVLVGEGVPSRTIARLIVLQPRTIMQKVDRIVYAVKT 212
           +  ++R     +      +   + +    GVP ++I  L+   P T   +  R    +  
Sbjct: 178 VKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNR 237

Query: 213 VKELGFEPKAGMFVHALRVMVSMNDSTWKKKINVLKSFGWSEEEILTAFKRHPLCLACSE 272
           V   GF+PK   FVHA+      ++S  ++K  + + FGWS+E+ + A  R P C+  S+
Sbjct: 238 VCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSD 297

Query: 273 EKMRDVADFCFNTAKLDPGTLISYPKFFGYGLNKRLWPRYKVFEVLKVKNLINKNK-KIA 332
           EK+    ++  N   L    +++ P      + KR+ PR +V  +L  K L+ K      
Sbjct: 298 EKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYF 357

Query: 333 QLFMEGERSFVENYVLKHLDEIPDLMDIYRGN 359
            +       F++ +VLK+ DE+P L+  +  N
Sbjct: 358 TILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]

BLAST of ClCG11G012930 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 142.1 bits (357), Expect = 8.6e-34
Identity = 96/342 (28.07%), Postives = 173/342 (50.58%), Query Frame = 0


Query: 22  SSSTLP--LGSVSTIEFLKNS-----CGLACRNLLIDEKNPQKYEAIISFFKLYGFENSQ 81
           SS+  P  + + + +EFL+++       +A      + K+ ++  ++I   K Y F ++Q
Sbjct: 28  SSNATPASISNPAFVEFLRDNGFQKPLAIAIAMRYPNLKSLEQPRSVIQMLKSYSFSDTQ 87

Query: 82  IAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPKVILSNPTILSRSLNHQLKPSF 141
           I K +   P ++  +V K L+PK+ F ++IG  G  L K +  N +++  SL  +L P+ 
Sbjct: 88  IQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSLVKKLIPTV 147

Query: 142 CFIKEML-ESDEKVIVVIRRAPW-LLTFDFKRIIQSNIDVLVGEGVPSRTIARLIVLQPR 201
             +K ++    E + V++ R  W LL+ D    +  NI  L   G+    +A L+  QPR
Sbjct: 148 EILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLASLLRRQPR 207

Query: 202 TIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINVLKSFGWSEEEI 261
                 +++   V    +LGF   + M VHA+  + S+++ T+ +K+ +  + G+SE+EI
Sbjct: 208 IFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMANGFSEDEI 267

Query: 262 LTAFKRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPKFFGYGLNKRLWPRYKVFEV 321
               +R P  + CSE+K+    +F      L+   L   P    Y L KR+ PR KV ++
Sbjct: 268 TDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVIPRLKVLQI 327

Query: 322 LKVKNLI----NKNKKIAQLFMEGERSFVENYVLKHLDEIPD 351
           L+ K L+     K K +  +    E +F+E YV++  DEI +
Sbjct: 328 LREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAE 369

[Close]

BLAST of ClCG11G012930 vs. TAIR 10
Match: AT3G46950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 129.4 bits (324), Expect = 5.8e-30
Identity = 99/423 (23.40%), Postives = 185/423 (43.74%), Query Frame = 0


Query: 12  FIQKRFVNTVSSSTLPLGSVSTIEFLKNSCGLA-------CRNLLIDEK-NPQKYEAIIS 71
           F  K F +T++  + P GS  T+ +L  S GL         + +  ++K NP   +++++
Sbjct: 33  FTTKSFSSTIAKDSSPKGSTFTVSYLVESLGLTKKLAETISKKVTFEDKVNP---DSVLN 92

Query: 72  FFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPKVILSNPTILS 131
             +  GF++SQI++++ + P +L +   K+L+PK++FL+  G     + +++ + PTIL 
Sbjct: 93  LLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSNVPTILD 152

Query: 132 RSLNHQLKPSFCFIKEMLESDEKVIVVIRRAPWLLTFDFKRIIQSNIDVLVGEGVPSRTI 191
           +     +   + F+K++++  + + +             K     NI VL   GVP + +
Sbjct: 153 KKGEESVSLYYDFVKDIMQDGKSLCISCPEGK-------KGNRIRNISVLRELGVPQKLL 212

Query: 192 ARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDSTWKKKINVLK 251
             L++ + + +  K ++   ++K V ++GF+P    FV AL V+  M++ T ++K+NV K
Sbjct: 213 FSLLISRYQPVCGK-EKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEKTIEEKVNVYK 272

Query: 252 SFGWSEEEILTAF----------------------------------------------- 311
             G+SE EI   F                                               
Sbjct: 273 RLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGLVEEEIISVLKSRPQCIRSSEQ 332

Query: 312 -----------------------KRHPLCLACSEEKMRDVADFCFNTAKLDPGTLISYPK 356
                                  KR+P C A S E +R   +            ++  P 
Sbjct: 333 KILDSIEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLRKKFEVLVKMMNWPLEAVVMIPT 392

[Close]

BLAST of ClCG11G012930 vs. TAIR 10
Match: AT1G62120.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 123.2 bits (308), Expect = 4.1e-28
Identity = 102/396 (25.76%), Postives = 171/396 (43.18%), Query Frame = 0


Query: 17  FVNTVSSSTLPL---------GSVSTIEFLKNSCGLACR-----NLLIDEKNPQKYEAII 76
           F NT SSS +           G   T+ +L +S GLA +     ++ +   N    ++++
Sbjct: 33  FSNTFSSSAIAADVSSRDGRKGHNFTVSYLVDSLGLATKVAESISMKVSFDNKGNPDSVL 92

Query: 77  SFFKLYGFENSQIAKLVSSRPAILHSSVSKNLKPKIEFLEEIGIVGPLLPKVILSNPTIL 136
           S  + +GF +SQI+ ++ + P +L     K+L PK++FL+ IG     L + + + P IL
Sbjct: 93  SLLRSHGFTDSQISNIIRTFPRLLILDAEKSLAPKLQFLQSIGASSSELTETVSAVPKIL 152

Query: 137 SRSLNHQLKPSFCFIKEMLESDE--KVIVVIRRAPWLLTFDFKRIIQSNIDVLVGEGVPS 196
            +     L   + F+K ++E+D+  K+  +    P     + K     N+ VL   GVP 
Sbjct: 153 GKRKGKSLSRYYDFVKVIIEADKSSKLEKLCHSLPEGSKQENK---IRNLLVLREMGVPQ 212

Query: 197 RTIARLIVLQPRTIMQKVDRIVYAVKTVKELGFEPKAGMFVHALRVMVSMNDSTWKKKIN 256
           R +  L++     +  K ++   ++K   E+GF+P    FV AL V+  ++D   + K N
Sbjct: 213 RLLFSLLISDAGDVCGK-EKFKESLKKAVEIGFDPTTATFVKALNVLYGLSDKGIENKFN 272

Query: 257 VLK-----------------------------------SFGWSEEEILTAFKRHPLCLAC 316
             K                                     G+S +E L   KR P C+  
Sbjct: 273 ACKRLGLAVDDVWAMFKKWPNILTKSEKKIENSVETFLGLGFSRDEFLMMVKRFPQCIGY 332

Query: 317 SEEKMRDVADFCFNTAKLDPGTLISYPKFFGYGLNKRLWPRYKVFEVLKVKNLINKN-KK 359
           S E M+   +F           + S P+  GY L KR  PR  V +VL  K L+      
Sbjct: 333 STELMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVIKVLISKGLLESELPP 392

The following BLAST results are available for this feature:

BLAST of ClCG11G012930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876362.1	9.2e-155	78.95	transcription termination factor MTERF5, chloroplastic-like [Benincasa hispida]	[more]
XP_038892570.1	4.0e-150	77.29	transcription termination factor MTERF9, chloroplastic-like [Benincasa hispida]	[more]
XP_023529167.1	7.8e-146	73.91	transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subs...	[more]
KAG6601090.1	5.6e-144	72.55	Transcription termination factor MTERF9, chloroplastic, partial [Cucurbita argyr...	[more]
XP_022983916.1	1.2e-143	73.37	transcription termination factor MTERF9, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of ClCG11G012930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JVI3	1.3e-13	23.83	Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9ZT96	6.5e-10	20.91	Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O...	[more]
F4IHL3	5.5e-09	19.92	Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O...	[more]
Q9SZL6	1.2e-08	24.83	Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidop...	[more]
Q9C6A1	2.3e-07	21.72	Transcription termination factor MTERF15, mitochondrial OS=Arabidopsis thaliana ...	[more]

BLAST of ClCG11G012930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J3P9	6.0e-144	73.37	transcription termination factor MTERF9, chloroplastic-like OS=Cucurbita maxima ...	[more]
A0A6J1GYF2	2.3e-143	72.55	transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita moschat...	[more]
A0A6J1GYC4	5.7e-142	73.37	transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita moschat...	[more]
A0A6J1J774	1.8e-140	72.01	transcription termination factor MTERF9, chloroplastic-like OS=Cucurbita maxima ...	[more]
A0A6J1GZE2	2.7e-136	70.11	transcription termination factor MTERF5, chloroplastic-like OS=Cucurbita moschat...	[more]

BLAST of ClCG11G012930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G07900.1	1.2e-56	34.23	Mitochondrial transcription termination factor family protein	[more]
AT1G21150.1	2.3e-39	27.11	Mitochondrial transcription termination factor family protein	[more]
AT5G64950.1	8.6e-34	28.07	Mitochondrial transcription termination factor family protein	[more]
AT3G46950.1	5.8e-30	23.40	Mitochondrial transcription termination factor family protein	[more]
AT1G62120.1	4.1e-28	25.76	Mitochondrial transcription termination factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	SMART	SM00733	mt_12	coord: 76..107 e-value: 3.7E-6 score: 36.5 coord: 148..179 e-value: 23.0 score: 13.9 coord: 285..316 e-value: 110.0 score: 11.5 coord: 253..284 e-value: 330.0 score: 7.6 coord: 112..143 e-value: 1.5 score: 17.8 coord: 218..248 e-value: 9.5 score: 15.2 coord: 184..214 e-value: 120.0 score: 11.0
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PFAM	PF02536	mTERF	coord: 227..329 e-value: 1.7E-17 score: 63.3 coord: 62..214 e-value: 1.7E-23 score: 83.1
IPR003690	Transcription termination factor, mitochondrial/chloroplastic	PANTHER	PTHR13068	CGI-12 PROTEIN-RELATED	coord: 22..359
IPR038538	MTERF superfamily, mitochondrial/chloroplastic	GENE3D	1.25.70.10	Transcription termination factor 3, mitochondrial	coord: 136..349 e-value: 1.4E-38 score: 134.6
None	No IPR available	PANTHER	PTHR13068:SF31	TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKE	coord: 22..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G012930.1	ClCG11G012930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003690	double-stranded DNA binding