ClCG11G012760 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G012760
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	G-patch domain-containing protein
Location	CG_Chr11: 26029490 .. 26033737 (+)
RNA-Seq Expression	ClCG11G012760
Synteny	ClCG11G012760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCACGGCGGCATCCGTTCTTCAGAATCAAGAACAAGGAACAAGGTTGAAGACTCGGCACGCTAGGGTTAGGCGAAAGTGCGAAATTTCTACAAGTTTCGAATTGAGTTAGGGTTTGGCAACATTCAGTCTTCTAAGAATTCACCCTCTGATCTCCATTGGACCTCAAGTTTATCCAGAAGTCCTTTCTCAGGTACGCCTCTTCACCAATTCGTTCTTTCGGTTCTTCAAGAATTACAGGGTATAAATGCATTCGTTGGAGAGGAATATGAGTTAAATCGTATGTGGGAGTTAGGTTCAGTTAGGTGTGTTGTCACTTGTTATAGGTTCAATCTATTCTTAATTTTGTATTTTAGTTATCATACTCCAGCTGAAGCGTTTGTTTGTTTTTGCTGTTTAGTAATTTATACTTGAGCGTAATCATTCGAGATGCATACATTTGTACTGCATTGATTGATTACAAAGTATGGTTATGGTAGTTATTATAAGGGTACATAAGTGTTTGGTGTGTAAAGTATGGCGAAAGAACAGGAGTTTTGTATCAATAGACTCATCGGGAGCTATTCAATTTCCAAATAGACATTATAAAGATGTGATATATTCGTATTATCTCATCGAGATGGCACTTTATGTTGGGGAAGACATTCTAATCGGACGCATAATCAATAGTTGAAAGATCACACGCTTTCAACTTCTCTTATTTTTTGGGACCTGTTACATTGAGAATGTAACATTACACGTGGGCGTCGCGGGGAGTGGAACTTTGTAGGGAGAAAATTGCTAACGCTGCTCTTAGTTTAAGATTAACATTGCAACTCAAACTCATGTTTGAGGTGCAGTGGGATGACATTGAAAGTTTAGGGCGAAAATTGATACAACTTGAATGTTTAGGGGTAAATTTGATTTTCTCCCCCTAATAATACTCATTTTTTATTAGGAAGATTGTAAATATTTATGTGTTATCTTTTTTACTTTGGGAAGATGATGTCTTTGGTCACAGTTCCACAGGAGGAAGGATGGACTTGGAGTCCGGCTCAGGAGGCTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGGTTCTCTCTCTTTCACCCACTATCGTCTATATGAAGTCTTAAGTCATGTATAGACTCTTCAAATTTTCGAGCTTTATTTTGTATACTGATTTTCTTTTTTTTTTCTTTTTGGGTTGTTGTCTTCTTGAAGCTTTTGAAGAAGCATGGTTGGAGGGAAGGAACGGGCCTTGGAGTTGCTGAGCAGGTTATTAACTAATAGATTTCATGCTTTATCATTTACTCTAAACAAGATTAGTCATTCTTCAATAATTTAAAAATTAGTTAGGTGGTTAGCGAAACAGCAAAATCTAGAACCTTTGATATCTTGTTACTACACAGTTATATACAACTAACAAGAATTTAGTGTGTAAACATGAGCATCATCAGAGTTAGTAATGAGGATTCTTTATGGGGATAGAAGTGAAGGAAGAAGGTATTGAATTCTAAAACAAGGATAAAGGCACAAGGAACCGTGTAACATGAAAATCTCATGTACTCAAAGGTTGTGGCAAGCAAATTTTCTTTTGATTGCAGGTGATGATGTTGGGGCAGTGGCCACCTCTTCTCCACTTTTGCTATTTATAGAAGTCCTCACAAAGCTATCCTAAGTCTTAAGAGCCCAGTTAAAGAAGGGGGGTAGTCTTTGTGTTGGGTGGTCGTAGATTCCAATCAGGGACCCTCACTGTATCTATCTGCTAGGAATGGAAAGACTACTAGCAGGGGCTGCCCGGGGTGGGAAATCCCTGATTTGACTAGGATATGATGGAGCACTGAGTTTTTTTTGGAAATTCTCGAACCTGGCAGTTTCTTTAGGGAAAAAAGAAGTGTACATAAATCTATCTGTTAATATTTATCTATGTCTATATCTATCTATAGATATATTGCTGGTCATGAAATAATTAAATTTGAAAAGCTACTAGATAATTTTAATGGCAGAAAAATATTTTCCCCACGTGGGAATTCCATGAACCCTCCTCCATTTCTCAAAATGGGAAAAAGGGTGGGAATGAAACTTAAGATTTTCTAGAGAGTTGGTAAGAGGAGAGCATCTTCTACTTGCTCGAGTGTAGTATTTTGATTCCTACTATCTCCTAGTTGGCTTGTCTTATGGTGGAGCAGGGAAGAAGCAGCTGATTTTTGTTGGCTTTGTTTCCTTTTTCAATTTAGAAGTGTTGAAGAATTTGTTTAGCATATTTTCTTTGCTTTTGGAGGGCGAAATATTTTATTGATAAACTTTTCACCCTTCCTTAGGGAAGAGCTAAATACAATTAGGGCATCATAGGAATTATGACTCGAAAGAATATATGAACTTTCCTAGAGAGTAGCATTAGATGAATGTTATAAAACTTATTATTACTAAGCTTATTATTATTTTTTATTTTTGAATTTGGAACTTTGTATCCATAGCATTAGTCTCTTTTCATTATATCAATGAAAAGTTTGTTTCTGTTTCAAAAAAAAAAAAAAGGATGTTATAAAGGAGAATAGTGTGTTTTGCCTCATCCTTTTGGAGTACATTTCCACACTGTATTTTTCCCCCCAAAAAGCAAGTTGAGAGGACTCTTGTCACTCCAATTTATTACTTGTTCCTCAATTTTTATCATCCCAAGCCCAACAATGAATTTTTTTGTTTTATTGTTGTTCTTTTTAAAAAGGAAAACGCATGGGGGTTCTTGTTTCTTCTTATGATGCATATAACTAGGTCATTGTAGTGCAGTGCTCTCTTGTTTTGTTGTTATCCGCCGATGTCTACACTTGGAAACTGACTATTTGACCTCTCATGCAAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAAACGTGGCTTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTACCGATACTAAAGCCTCTGATAAGAAAAATAACCAGGTAAAACATTTGCTAGGTGTGGTTTAGATTGGAAAAGGTCTGGAAACTACAGGAGCTTAGAAAAACCCTTTCAAATTGTAATTAATTTCAAAAAGAGTATAATTACGAAAAGAATTATGTAGGAAACACTAGGAAGAAGAAGAACAATTGCACTCAGCCATCTCAACAATTCATTCATTTTTCAAATAACTTTTTTATTAATTTCTCTCCGATCAAGTTCCCTAAGCCGAAATGTCACTGCAATTATAGGTAGTGTTTTCGCCTTCTCTAAACCCTGACCACATAACTGCTTAGAATACTGTGTTTTGCTGGATTGTTTGATAGTCCAAGAGACTTGCATCAGTCGCTTGCTCACAATGTGTTATCACAAGCCAGCAAATAGGTCAATGATGCCAACATTTGATTAGATTCGAACGGCTTGATGTGCGAGTTTCAACTATTGTCTTCATAAGCTGGCATCATGACAGCAAATATTTTGACATGGTCGTCTTCAAAAGTTTCACATACATAACTTTTTCGCAAAGGTAAAGAAAAGTTGCACATTTTGATGTATCATGGGCCTTGAGGTACATGGTCCCAAAAAAGATGATTCGGGTGGGGGAATTGAACTTCTAGCCTCTTTGTTGAGCGTATATGCGCTAACAAGTTGAGCTATGTTCAAGTTAACAAATAGATGTTTTTATTTAGAATAAAAATTATGTTTTCAATTCCATGAAAACGGGAATGCAGCAAGCATGAAGACTCGAAGTCAGGTGGATAGAGAGTGCACGCTGTCACTGTGGCACAATGACATTTTTCTTTTTGAGTTCACAATGAATGAGGGTGTAGGGAGATTCAAACTTTTGATTTCTTAGTCGATACATAGCTCGATTTATATAATTTGTTCACTCTGTGCGTACCAAATAATAACTGACATGTACCTAACTGAGTAATACTAATATTATCGATCTTCAGGAACGTCCTCCTCCAAAGAAAGCGAGGGGGCTGTCAAAAAGGACGAGGAAGATGGAAGAGGAAGAGAGGCTATTTCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGATACAATACTCCCAGTGTAAGCAAATTCAGATTGTTTGTAATGTAAAAGCCTTTTTAGTTATGGCTTTAAAGCAGTCAGCATTCAACCTAGTAGTATGTAAATATGATTACACCCAACAGAGTTGTGAAATTTAATTTTGTTTACTATTTGTTATATTTGTACCTTTTAATTTCTGTGAGCCTC

mRNA sequence

TGCACGGCGGCATCCGTTCTTCAGAATCAAGAACAAGGAACAAGGTTGAAGACTCGGCACGCTAGGGTTAGGCGAAAGTGCGAAATTTCTACAAGTTTCGAATTGAGTTAGGGTTTGGCAACATTCAGTCTTCTAAGAATTCACCCTCTGATCTCCATTGGACCTCAAGTTTATCCAGAAGTCCTTTCTCAGTTCCACAGGAGGAAGGATGGACTTGGAGTCCGGCTCAGGAGGCTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGCTTTTGAAGAAGCATGGTTGGAGGGAAGGAACGGGCCTTGGAGTTGCTGAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAAACGTGGCTTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTACCGATACTAAAGCCTCTGATAAGAAAAATAACCAGGTAAAACATTTGCTAGGTGTGGAACGTCCTCCTCCAAAGAAAGCGAGGGGGCTGTCAAAAAGGACGAGGAAGATGGAAGAGGAAGAGAGGCTATTTCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGATACAATACTCCCAGTGTAAGCAAATTCAGATTGTTTGTAATGTAAAAGCCTTTTTAGTTATGGCTTTAAAGCAGTCAGCATTCAACCTAGTAGTATGTAAATATGATTACACCCAACAGAGTTGTGAAATTTAATTTTGTTTACTATTTGTTATATTTGTACCTTTTAATTTCTGTGAGCCTC

Coding sequence (CDS)

ATGGACTTGGAGTCCGGCTCAGGAGGCTCTGTTTCTGCTGCAGCCATTGATTCTTCGAACATAGGGTTTCAGCTTTTGAAGAAGCATGGTTGGAGGGAAGGAACGGGCCTTGGAGTTGCTGAGCAGGGTAGGTTGGAACCCGTACAGGCATCTGTAAAGAATAATAAACGTGGCTTGGGAGCAGATAAAGTGAAGAAGAAGCTTAAAGAAACTACCGATACTAAAGCCTCTGATAAGAAAAATAACCAGGTAAAACATTTGCTAGGTGTGGAACGTCCTCCTCCAAAGAAAGCGAGGGGGCTGTCAAAAAGGACGAGGAAGATGGAAGAGGAAGAGAGGCTATTTCAAGAGAAGGAATTTGAGCGAGCATTTTTTAGGGAATTTTGGCCAGAAAATGTTTGA

Protein sequence

MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFFREFWPENV

Homology

[Close]

BLAST of ClCG11G012760 vs. NCBI nr
Match: XP_008445906.1 (PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 217.2 bits (552), Expect = 8.3e-53
Identity = 115/133 (86.47%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 60
           MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLG
Sbjct: 1   MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60

Query: 61  ADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEF 120
           ADKVKKK+KET D  ASD+KNNQ       ERPPPKK +GLSKR RKM+EEERLFQEKEF
Sbjct: 61  ADKVKKKIKETKDNAASDRKNNQ-------ERPPPKKGKGLSKRMRKMQEEERLFQEKEF 120

Query: 121 ERAFFREFWPENV 134
           ERAFFREFWPENV
Sbjct: 121 ERAFFREFWPENV 126

[Close]

BLAST of ClCG11G012760 vs. NCBI nr
Match: XP_016900186.1 (PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 217.2 bits (552), Expect = 8.3e-53
Identity = 115/133 (86.47%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 60
           MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLG
Sbjct: 11  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 70

Query: 61  ADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEF 120
           ADKVKKK+KET D  ASD+KNNQ       ERPPPKK +GLSKR RKM+EEERLFQEKEF
Sbjct: 71  ADKVKKKIKETKDNAASDRKNNQ-------ERPPPKKGKGLSKRMRKMQEEERLFQEKEF 130

Query: 121 ERAFFREFWPENV 134
           ERAFFREFWPENV
Sbjct: 131 ERAFFREFWPENV 136

[Close]

BLAST of ClCG11G012760 vs. NCBI nr
Match: XP_004147099.1 (G patch domain and ankyrin repeat-containing protein 1 homolog [Cucumis sativus] >KGN51573.1 hypothetical protein Csa_008303 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 3.2e-52
Identity = 113/133 (84.96%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 1   MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 60
           MDLESG GGSVSAAAIDSSNIGF+LLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLG
Sbjct: 1   MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60

Query: 61  ADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEF 120
           ADKVKKK+KETTD   SD+KNNQ       ERPPPKKA+GL+KR RKM+EEERLFQEKEF
Sbjct: 61  ADKVKKKIKETTDNATSDRKNNQ-------ERPPPKKAKGLTKRMRKMQEEERLFQEKEF 120

Query: 121 ERAFFREFWPENV 134
           E+AFFREFWPENV
Sbjct: 121 EQAFFREFWPENV 126

[Close]

BLAST of ClCG11G012760 vs. NCBI nr
Match: XP_038891672.1 (protein PXR1 [Benincasa hispida])

HSP 1 Score: 206.1 bits (523), Expect = 1.9e-49
Identity = 111/133 (83.46%), Postives = 116/133 (87.22%), Query Frame = 0


Query: 1   MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 60
           MDLE GSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQAS+KNNKRGLG
Sbjct: 50  MDLEYGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASIKNNKRGLG 109

Query: 61  ADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEF 120
           ADKVKKKLKETTD  ASD+KNNQ             KA+GLSKR RKM+EEERLFQEKEF
Sbjct: 110 ADKVKKKLKETTDIAASDRKNNQ-------------KAKGLSKRMRKMQEEERLFQEKEF 169

Query: 121 ERAFFREFWPENV 134
           ERAFFREFWPENV
Sbjct: 170 ERAFFREFWPENV 169

[Close]

BLAST of ClCG11G012760 vs. NCBI nr
Match: XP_022945156.1 (G patch domain and ankyrin repeat-containing protein 1 homolog [Cucurbita moschata] >XP_022945157.1 G patch domain and ankyrin repeat-containing protein 1 homolog [Cucurbita moschata])

HSP 1 Score: 202.2 bits (513), Expect = 2.8e-48
Identity = 108/133 (81.20%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 60
           MDLESGSGGSVSA AIDSSNIGFQLLKKHGWREGTGLG++EQGRLEPVQ SVKNNKRGLG
Sbjct: 1   MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLG 60

Query: 61  ADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEF 120
           ADKVKKKLKETTD  ASD KN         ERPP KKA+ +SK+ RKM EEERLF+EKEF
Sbjct: 61  ADKVKKKLKETTDIAASDTKNQ--------ERPPSKKAKAMSKKMRKMLEEERLFREKEF 120

Query: 121 ERAFFREFWPENV 134
           ERAFFREFWP+NV
Sbjct: 121 ERAFFREFWPDNV 125

[Close]

BLAST of ClCG11G012760 vs. ExPASy Swiss-Prot
Match: Q6C233 (Protein SQS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SQS1 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 5.5e-07
Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 13  AAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA 62
           A AID SNIG  LL+K GW  G GLG   +G  EP+ A VK +KRG+GA
Sbjct: 764 APAIDDSNIGRLLLQKMGWTTGEGLGAQSRGISEPIIAKVKISKRGIGA 812

[Close]

BLAST of ClCG11G012760 vs. ExPASy Swiss-Prot
Match: Q9UKJ3 (G patch domain-containing protein 8 OS=Homo sapiens OX=9606 GN=GPATCH8 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 6.1e-06
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 16 IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 61
          I+S NIG +LL+KHGW+ G GLG + QGR +P+   VK +  G+G
Sbjct: 38 IESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 82

[Close]

BLAST of ClCG11G012760 vs. ExPASy Swiss-Prot
Match: A2A6A1 (G patch domain-containing protein 8 OS=Mus musculus OX=10090 GN=Gpatch8 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.1e-06
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 0


Query: 16 IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 61
          I+S NIG +LL+KHGW+ G GLG + QGR +P+   VK +  G+G
Sbjct: 38 IESDNIGHRLLQKHGWKLGQGLGKSLQGRTDPIPIVVKYDVMGMG 82

[Close]

BLAST of ClCG11G012760 vs. ExPASy Swiss-Prot
Match: A0JMV4 (RNA-binding protein 5-A OS=Xenopus laevis OX=8355 GN=rbm5-a PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.9e-06
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 16  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA 62
           ID+SNIG ++L+  GW+EG+GLG   QG   P+QA V+    GLGA
Sbjct: 759 IDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLGA 804

[Close]

BLAST of ClCG11G012760 vs. ExPASy Swiss-Prot
Match: Q6DDU9 (RNA-binding protein 5-B OS=Xenopus laevis OX=8355 GN=rbm5-b PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.9e-06
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 16  IDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGA 62
           ID+SNIG ++L+  GW+EG+GLG   QG   P+QA V+    GLGA
Sbjct: 675 IDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQAQVRMRGAGLGA 720

[Close]

BLAST of ClCG11G012760 vs. ExPASy TrEMBL
Match: A0A1S4DW19 (G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488788 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.0e-53
Identity = 115/133 (86.47%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 60
           MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLG
Sbjct: 11  MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 70

Query: 61  ADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEF 120
           ADKVKKK+KET D  ASD+KNNQ       ERPPPKK +GLSKR RKM+EEERLFQEKEF
Sbjct: 71  ADKVKKKIKETKDNAASDRKNNQ-------ERPPPKKGKGLSKRMRKMQEEERLFQEKEF 130

Query: 121 ERAFFREFWPENV 134
           ERAFFREFWPENV
Sbjct: 131 ERAFFREFWPENV 136

[Close]

BLAST of ClCG11G012760 vs. ExPASy TrEMBL
Match: A0A1S3BEH2 (G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488788 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.0e-53
Identity = 115/133 (86.47%), Postives = 120/133 (90.23%), Query Frame = 0


Query: 1   MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 60
           MDLESG GGSVSAAAIDSSNIGFQLLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLG
Sbjct: 1   MDLESGPGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60

Query: 61  ADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEF 120
           ADKVKKK+KET D  ASD+KNNQ       ERPPPKK +GLSKR RKM+EEERLFQEKEF
Sbjct: 61  ADKVKKKIKETKDNAASDRKNNQ-------ERPPPKKGKGLSKRMRKMQEEERLFQEKEF 120

Query: 121 ERAFFREFWPENV 134
           ERAFFREFWPENV
Sbjct: 121 ERAFFREFWPENV 126

[Close]

BLAST of ClCG11G012760 vs. ExPASy TrEMBL
Match: A0A0A0KPR8 (G-patch domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G579590 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.5e-52
Identity = 113/133 (84.96%), Postives = 121/133 (90.98%), Query Frame = 0


Query: 1   MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 60
           MDLESG GGSVSAAAIDSSNIGF+LLKKHGWREGTGLGV+EQGRLEPVQASVKNNKRGLG
Sbjct: 1   MDLESGPGGSVSAAAIDSSNIGFRLLKKHGWREGTGLGVSEQGRLEPVQASVKNNKRGLG 60

Query: 61  ADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEF 120
           ADKVKKK+KETTD   SD+KNNQ       ERPPPKKA+GL+KR RKM+EEERLFQEKEF
Sbjct: 61  ADKVKKKIKETTDNATSDRKNNQ-------ERPPPKKAKGLTKRMRKMQEEERLFQEKEF 120

Query: 121 ERAFFREFWPENV 134
           E+AFFREFWPENV
Sbjct: 121 EQAFFREFWPENV 126

[Close]

BLAST of ClCG11G012760 vs. ExPASy TrEMBL
Match: A0A6J1G054 (G patch domain and ankyrin repeat-containing protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111449480 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.3e-48
Identity = 108/133 (81.20%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 60
           MDLESGSGGSVSA AIDSSNIGFQLLKKHGWREGTGLG++EQGRLEPVQ SVKNNKRGLG
Sbjct: 1   MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLG 60

Query: 61  ADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEF 120
           ADKVKKKLKETTD  ASD KN         ERPP KKA+ +SK+ RKM EEERLF+EKEF
Sbjct: 61  ADKVKKKLKETTDIAASDTKNQ--------ERPPSKKAKAMSKKMRKMLEEERLFREKEF 120

Query: 121 ERAFFREFWPENV 134
           ERAFFREFWP+NV
Sbjct: 121 ERAFFREFWPDNV 125

[Close]

BLAST of ClCG11G012760 vs. ExPASy TrEMBL
Match: A0A6J1HTU1 (G patch domain and ankyrin repeat-containing protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111466528 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 6.7e-48
Identity = 107/133 (80.45%), Postives = 115/133 (86.47%), Query Frame = 0


Query: 1   MDLESGSGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLG 60
           MDLESGSGGSVSA AIDSSNIGFQLLKKHGWREGTGLG++EQGRLEPVQ SVKNNKRGLG
Sbjct: 1   MDLESGSGGSVSATAIDSSNIGFQLLKKHGWREGTGLGISEQGRLEPVQTSVKNNKRGLG 60

Query: 61  ADKVKKKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEF 120
           ADKVKKKLKE+TD  ASD KN         ERP  KKA+ +SK+TRKM EEERLF+EKEF
Sbjct: 61  ADKVKKKLKESTDIAASDTKNQ--------ERPSSKKAKAMSKKTRKMLEEERLFREKEF 120

Query: 121 ERAFFREFWPENV 134
           ERAFFREFWP+NV
Sbjct: 121 ERAFFREFWPDNV 125

[Close]

BLAST of ClCG11G012760 vs. TAIR 10
Match: AT5G08535.2 (D111/G-patch domain-containing protein )

HSP 1 Score: 122.5 bits (306), Expect = 2.6e-28
Identity = 71/127 (55.91%), Postives = 90/127 (70.87%), Query Frame = 0


Query: 7   SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKK 66
           SG S S AAI+SSNIGFQLLKKHGW+EGTGLG+AEQG L P+QA  K+NKRG+GA +  K
Sbjct: 5   SGSSSSLAAINSSNIGFQLLKKHGWKEGTGLGIAEQGILVPLQAEPKHNKRGVGAKQPAK 64

Query: 67  KLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFFR 126
             ++    +A D++ +             K+++ LSK+ RKM E E+  QEKEFERAFFR
Sbjct: 65  --RKVAQPQAKDEEVS-------------KQSKKLSKKMRKMMEHEKHLQEKEFERAFFR 116

Query: 127 EFWPENV 134
           EFWP+NV
Sbjct: 125 EFWPDNV 116

[Close]

BLAST of ClCG11G012760 vs. TAIR 10
Match: AT5G08535.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 122.5 bits (306), Expect = 2.6e-28
Identity = 71/127 (55.91%), Postives = 90/127 (70.87%), Query Frame = 0


Query: 7   SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVKK 66
           SG S S AAI+SSNIGFQLLKKHGW+EGTGLG+AEQG L P+QA  K+NKRG+GA +  K
Sbjct: 30  SGSSSSLAAINSSNIGFQLLKKHGWKEGTGLGIAEQGILVPLQAEPKHNKRGVGAKQPAK 89

Query: 67  KLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFFR 126
             ++    +A D++ +             K+++ LSK+ RKM E E+  QEKEFERAFFR
Sbjct: 90  --RKVAQPQAKDEEVS-------------KQSKKLSKKMRKMMEHEKHLQEKEFERAFFR 141

Query: 127 EFWPENV 134
           EFWP+NV
Sbjct: 150 EFWPDNV 141

[Close]

BLAST of ClCG11G012760 vs. TAIR 10
Match: AT3G52350.1 (D111/G-patch domain-containing protein )

HSP 1 Score: 107.5 bits (267), Expect = 8.7e-24
Identity = 66/128 (51.56%), Postives = 81/128 (63.28%), Query Frame = 0


Query: 7   SGGSVSAAAIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADK-VK 66
           S  S  + AI SSNIGFQLLKKHGW+EGTGLG+ EQG L P+QA  K+NK+GLGA+K  K
Sbjct: 68  SESSNPSTAISSSNIGFQLLKKHGWKEGTGLGITEQGILVPLQAEPKHNKQGLGAEKPAK 127

Query: 67  KKLKETTDTKASDKKNNQVKHLLGVERPPPKKARGLSKRTRKMEEEERLFQEKEFERAFF 126
           +K  +  DT   +                 KK++ LSK+  KM E E+   E EFERAF 
Sbjct: 128 RKPAQPQDTAFEEVS---------------KKSKKLSKKLVKMIEHEKRLAENEFERAFR 180

Query: 127 REFWPENV 134
           REFWP+NV
Sbjct: 188 REFWPDNV 180

[Close]

BLAST of ClCG11G012760 vs. TAIR 10
Match: AT3G54230.1 (suppressor of abi3-5 )

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 0


Query: 15  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVK 66
           AID SN+G ++L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Sbjct: 925 AIDESNVGNRMLRNMGWHEGSGLGKDGSGMKEPVQAQGVDRRAGLGSQQKK 975

[Close]

BLAST of ClCG11G012760 vs. TAIR 10
Match: AT3G54230.2 (suppressor of abi3-5 )

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 24/51 (47.06%), Postives = 33/51 (64.71%), Query Frame = 0


Query: 15  AIDSSNIGFQLLKKHGWREGTGLGVAEQGRLEPVQASVKNNKRGLGADKVK 66
           AID SN+G ++L+  GW EG+GLG    G  EPVQA   + + GLG+ + K
Sbjct: 926 AIDESNVGNRMLRNMGWHEGSGLGKDGSGMKEPVQAQGVDRRAGLGSQQKK 976

The following BLAST results are available for this feature:

BLAST of ClCG11G012760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445906.1	8.3e-53	86.47	PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isofor...	[more]
XP_016900186.1	8.3e-53	86.47	PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog isofor...	[more]
XP_004147099.1	3.2e-52	84.96	G patch domain and ankyrin repeat-containing protein 1 homolog [Cucumis sativus]...	[more]
XP_038891672.1	1.9e-49	83.46	protein PXR1 [Benincasa hispida]	[more]
XP_022945156.1	2.8e-48	81.20	G patch domain and ankyrin repeat-containing protein 1 homolog [Cucurbita moscha...	[more]

BLAST of ClCG11G012760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6C233	5.5e-07	57.14	Protein SQS1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=SQS1 ...	[more]
Q9UKJ3	6.1e-06	51.11	G patch domain-containing protein 8 OS=Homo sapiens OX=9606 GN=GPATCH8 PE=1 SV=2	[more]
A2A6A1	6.1e-06	51.11	G patch domain-containing protein 8 OS=Mus musculus OX=10090 GN=Gpatch8 PE=1 SV=...	[more]
A0JMV4	7.9e-06	52.17	RNA-binding protein 5-A OS=Xenopus laevis OX=8355 GN=rbm5-a PE=2 SV=1	[more]
Q6DDU9	7.9e-06	52.17	RNA-binding protein 5-B OS=Xenopus laevis OX=8355 GN=rbm5-b PE=2 SV=1	[more]

BLAST of ClCG11G012760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DW19	4.0e-53	86.47	G patch domain and ankyrin repeat-containing protein 1 homolog isoform X1 OS=Cuc...	[more]
A0A1S3BEH2	4.0e-53	86.47	G patch domain and ankyrin repeat-containing protein 1 homolog isoform X2 OS=Cuc...	[more]
A0A0A0KPR8	1.5e-52	84.96	G-patch domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G579590 PE=...	[more]
A0A6J1G054	1.3e-48	81.20	G patch domain and ankyrin repeat-containing protein 1 homolog OS=Cucurbita mosc...	[more]
A0A6J1HTU1	6.7e-48	80.45	G patch domain and ankyrin repeat-containing protein 1 homolog OS=Cucurbita maxi...	[more]

BLAST of ClCG11G012760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08535.2	2.6e-28	55.91	D111/G-patch domain-containing protein	[more]
AT5G08535.1	2.6e-28	55.91	D111/G-patch domain-containing protein	[more]
AT3G52350.1	8.7e-24	51.56	D111/G-patch domain-containing protein	[more]
AT3G54230.1	1.3e-06	47.06	suppressor of abi3-5	[more]
AT3G54230.2	1.3e-06	47.06	suppressor of abi3-5	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000467	G-patch domain	SMART	SM00443	G-patch_5	coord: 16..62 e-value: 8.2E-18 score: 75.2
IPR000467	G-patch domain	PFAM	PF01585	G-patch	coord: 19..61 e-value: 1.1E-17 score: 63.6
IPR000467	G-patch domain	PROSITE	PS50174	G_PATCH	coord: 18..64 score: 16.835974
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..112
IPR039146	G patch domain and ankyrin repeat-containing protein 1	PANTHER	PTHR20923	BAT4 PROTEIN-RELATED	coord: 9..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G012760.2	ClCG11G012760.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding