ClCG11G012600 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G012600
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Transcription factor IBH1
Location	CG_Chr11: 25762194 .. 25762721 (-)
RNA-Seq Expression	ClCG11G012600
Synteny	ClCG11G012600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAACCCCAATAAGCTCAAACAAAAATTTCTCAGGAAATGGTTGGTAGGTCTTAAGTCAACCACTTCTACCAACACAAACATGAACTTCCTAGAAAGAAAGAAAGCCATAAAGATGGCGGCCGACCATGCCATGGCCGCAATGAGGAACGGCGCGACTATTTGGAGTCGAGCCATCATTGCTAAATCTATGAAAGGCCAAACTCCACTTGAAGCCATATTGAATCGTCGAATGATATATGCGAAGCTTCGAAGGAAGAAGATGACGACGACAACAACACTGCGAAAGATGGGTCGGAGAGTCGGTAGAAAGATGGCGAGGAGTCGCTCGGCTCCGTTGAAGGCGTTAGCGAGCACGGTTGCAAAGAGATTGGTTGAGAAAAGAACCATAGTTTTGAGGAGTTTGGTTCCGGGAGGAGAGTTTATGGAGGATGATGTTTTGTTGATGGAAGAAGCCCTAGATTATATGACGTTTCTTCAAGCTCAGGTTGATGGAATGCGTTTTGTTGCTAATTATTGTAGATGA

mRNA sequence

ATGTCCAACCCCAATAAGCTCAAACAAAAATTTCTCAGGAAATGGTTGGTAGGTCTTAAGTCAACCACTTCTACCAACACAAACATGAACTTCCTAGAAAGAAAGAAAGCCATAAAGATGGCGGCCGACCATGCCATGGCCGCAATGAGGAACGGCGCGACTATTTGGAGTCGAGCCATCATTGCTAAATCTATGAAAGGCCAAACTCCACTTGAAGCCATATTGAATCGTCGAATGATATATGCGAAGCTTCGAAGGAAGAAGATGACGACGACAACAACACTGCGAAAGATGGGTCGGAGAGTCGGTAGAAAGATGGCGAGGAGTCGCTCGGCTCCGTTGAAGGCGTTAGCGAGCACGGTTGCAAAGAGATTGGTTGAGAAAAGAACCATAGTTTTGAGGAGTTTGGTTCCGGGAGGAGAGTTTATGGAGGATGATGTTTTGTTGATGGAAGAAGCCCTAGATTATATGACGTTTCTTCAAGCTCAGGTTGATGGAATGCGTTTTGTTGCTAATTATTGTAGATGA

Coding sequence (CDS)

ATGTCCAACCCCAATAAGCTCAAACAAAAATTTCTCAGGAAATGGTTGGTAGGTCTTAAGTCAACCACTTCTACCAACACAAACATGAACTTCCTAGAAAGAAAGAAAGCCATAAAGATGGCGGCCGACCATGCCATGGCCGCAATGAGGAACGGCGCGACTATTTGGAGTCGAGCCATCATTGCTAAATCTATGAAAGGCCAAACTCCACTTGAAGCCATATTGAATCGTCGAATGATATATGCGAAGCTTCGAAGGAAGAAGATGACGACGACAACAACACTGCGAAAGATGGGTCGGAGAGTCGGTAGAAAGATGGCGAGGAGTCGCTCGGCTCCGTTGAAGGCGTTAGCGAGCACGGTTGCAAAGAGATTGGTTGAGAAAAGAACCATAGTTTTGAGGAGTTTGGTTCCGGGAGGAGAGTTTATGGAGGATGATGTTTTGTTGATGGAAGAAGCCCTAGATTATATGACGTTTCTTCAAGCTCAGGTTGATGGAATGCGTTTTGTTGCTAATTATTGTAGATGA

Protein sequence

MSNPNKLKQKFLRKWLVGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAIIAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPLKALASTVAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVANYCR

Homology

[Close]

BLAST of ClCG11G012600 vs. NCBI nr
Match: XP_038890559.1 (transcription factor IBH1-like 1 [Benincasa hispida])

HSP 1 Score: 275.0 bits (702), Expect = 4.4e-70
Identity = 148/175 (84.57%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAI 60
           M NPNKLKQ+FL+KWLVGLKSTTS+NTNMN LERKKAIKM+AD+AMAA RNG+TIWSRAI
Sbjct: 1   MPNPNKLKQQFLKKWLVGLKSTTSSNTNMNILERKKAIKMSADYAMAATRNGSTIWSRAI 60

Query: 61  IAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPLKALAST 120
           IAKS+KGQ PLEAI NR+ IYAKL+RKKM TTTTL KMGRRVGRK+ARSRS P KALA T
Sbjct: 61  IAKSIKGQAPLEAISNRQTIYAKLQRKKM-TTTTLWKMGRRVGRKVARSRSPPWKALART 120

Query: 121 VAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVANYCR 176
           VAKRLVEKRT VLRSLVPGGEFMED+VLL+EEALDY+TFLQAQVDGMRF+ANYC+
Sbjct: 121 VAKRLVEKRTKVLRSLVPGGEFMEDEVLLIEEALDYITFLQAQVDGMRFLANYCK 174

[Close]

BLAST of ClCG11G012600 vs. NCBI nr
Match: KAA0048635.1 (transcription factor IBH1 [Cucumis melo var. makuwa] >TYK10836.1 transcription factor IBH1 [Cucumis melo var. makuwa])

HSP 1 Score: 240.0 bits (611), Expect = 1.6e-59
Identity = 129/176 (73.30%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAI 60
           M NPNKLKQ+FL+ WLVGL+STTS+ TNMNFL+RKKAIK++AD+AMAA RNG TIWS++I
Sbjct: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPL-KALAS 120
           IAKS+KG  P EAILNRR  Y  L RKK  T T LRKMGR++GRKMAR    PL KAL S
Sbjct: 61  IAKSLKGHAPPEAILNRRTSYINLLRKK-RTMTQLRKMGRKIGRKMARRSRLPLSKALPS 120

Query: 121 TVAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVANYCR 176
           T+AKRLVEKRT VLRSL+PGGEFM+D+ LL+EEALDY+ FLQAQVDGMRF+ANYC+
Sbjct: 121 TIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

[Close]

BLAST of ClCG11G012600 vs. NCBI nr
Match: XP_008452339.1 (PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo])

HSP 1 Score: 233.8 bits (595), Expect = 1.1e-57
Identity = 127/176 (72.16%), Postives = 148/176 (84.09%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAI 60
           M N NKLKQ+FL+ WLVGL+STTS+ TNMNFL+RKKAIK++AD+AMAA RNG TIWS++I
Sbjct: 1   MPNLNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPL-KALAS 120
           IAK +KG  P EAILNRR  Y  L RKK  T T LRKMGR++GRKMAR    PL KAL S
Sbjct: 61  IAKYLKGHAPPEAILNRRTSYINLLRKK-RTMTQLRKMGRKIGRKMARRSRLPLSKALPS 120

Query: 121 TVAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVANYCR 176
           T+AKRLVEKRT VLRSL+PGGEFM+D+ LL+EEALDY+ FLQAQVDGMRF+ANYC+
Sbjct: 121 TIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

[Close]

BLAST of ClCG11G012600 vs. NCBI nr
Match: XP_004149100.1 (transcription factor IBH1-like 1 [Cucumis sativus] >KGN61086.1 hypothetical protein Csa_021346 [Cucumis sativus])

HSP 1 Score: 222.6 bits (566), Expect = 2.6e-54
Identity = 124/175 (70.86%), Postives = 147/175 (84.00%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTN-TNMNFLERKKAIKMAADHAMAAMRNGATIWSRA 60
           M NPNKLKQ+FL+KWLVGL+STTS++ TNMNFL+RKKAIK++AD+AMA  R G TIWS++
Sbjct: 1   MPNPNKLKQQFLKKWLVGLRSTTSSSTTNMNFLDRKKAIKISADYAMAETRKGTTIWSQS 60

Query: 61  IIAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMGRRVGRKMA-RSRSAPLKALA 120
           IIAKS+KG  P +AILNR  IY  L RKK  T T L+KMGR++GR+MA RSR    K L 
Sbjct: 61  IIAKSLKGHAPPKAILNRGTIYINLLRKK-RTMTQLQKMGRKIGRRMARRSRLPSSKVLP 120

Query: 121 STVAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVANY 174
            T+AKRLVEKRT VLRSL+PGGEFMED+VLL+EEALDY+ FLQAQVDGMRF+ANY
Sbjct: 121 RTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANY 174

[Close]

BLAST of ClCG11G012600 vs. NCBI nr
Match: XP_022153351.1 (transcription factor IBH1-like 1 [Momordica charantia])

HSP 1 Score: 184.9 bits (468), Expect = 6.0e-43
Identity = 108/175 (61.71%), Postives = 131/175 (74.86%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAI 60
           M NPNKLKQ+FL KW V LK+ T++NT M+  ERKKAIKM+AD AMA+ RNG TIWSRAI
Sbjct: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60

Query: 61  IAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMG-RRVGRKMARSRS--APLKAL 120
           IAKSMK + P E +L+  +   KL +     TT ++  G RRVGR+  R  +   P KA 
Sbjct: 61  IAKSMKDRVPAEIVLSHPVHGVKLSKLGRKKTTMVQTKGRRRVGRRATRRSNFFPPSKAF 120

Query: 121 ASTVAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVAN 173
           A  VAKRLVEKR  VLRSLVPGGEFMED+VLL+EE LDY++FL+AQVDGMRF+A+
Sbjct: 121 ARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS 175

[Close]

BLAST of ClCG11G012600 vs. ExPASy Swiss-Prot
Match: Q9M0B9 (Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.7e-22
Identity = 68/172 (39.53%), Postives = 102/172 (59.30%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAI 60
           M   + + ++FL+KW +GL+    +  N +  ERKKAIK++AD AMA++R G T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPLKALAST 120
           I K+      L   +   +    L  KK+   T   +   R  +K+ R +S      A+ 
Sbjct: 61  IEKTATEDNFLVRQMLSGIKAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSASEEAAA 120

Query: 121 VAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVAN 173
            AKRLV++RT  LR++VPGGE M +DVLL++E LDY+  LQ QV+ MR + +
Sbjct: 121 KAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVD 172

[Close]

BLAST of ClCG11G012600 vs. ExPASy Swiss-Prot
Match: Q9C8Z9 (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.0e-04
Identity = 50/152 (32.89%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 17  VGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAIIAKSMKGQTPLEAILN 76
           V L S+ ST+++    +R KA++ AAD A+A    G T+WSRAI+A  +K          
Sbjct: 68  VRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIK---------- 127

Query: 77  RRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPLKAL-ASTVAKRLVEKRTIVLRS 136
             + + K RR +   T  +  M   V     RSR   +  L  +  +   V ++  VL  
Sbjct: 128 --LKFRKQRRPR--ATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGR 187

Query: 137 LVPGGEFMEDDVLLMEEALDYMTFLQAQVDGM 168
           LVPG       V+L EEA DY+  L+ QV  M
Sbjct: 188 LVPGCGKQSVPVIL-EEATDYIQALEMQVRAM 204

[Close]

BLAST of ClCG11G012600 vs. ExPASy TrEMBL
Match: A0A5D3CK75 (Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00030 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 7.6e-60
Identity = 129/176 (73.30%), Postives = 150/176 (85.23%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAI 60
           M NPNKLKQ+FL+ WLVGL+STTS+ TNMNFL+RKKAIK++AD+AMAA RNG TIWS++I
Sbjct: 1   MPNPNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPL-KALAS 120
           IAKS+KG  P EAILNRR  Y  L RKK  T T LRKMGR++GRKMAR    PL KAL S
Sbjct: 61  IAKSLKGHAPPEAILNRRTSYINLLRKK-RTMTQLRKMGRKIGRKMARRSRLPLSKALPS 120

Query: 121 TVAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVANYCR 176
           T+AKRLVEKRT VLRSL+PGGEFM+D+ LL+EEALDY+ FLQAQVDGMRF+ANYC+
Sbjct: 121 TIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

[Close]

BLAST of ClCG11G012600 vs. ExPASy TrEMBL
Match: A0A1S3BT01 (uncharacterized protein LOC103493395 OS=Cucumis melo OX=3656 GN=LOC103493395 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 5.5e-58
Identity = 127/176 (72.16%), Postives = 148/176 (84.09%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAI 60
           M N NKLKQ+FL+ WLVGL+STTS+ TNMNFL+RKKAIK++AD+AMAA RNG TIWS++I
Sbjct: 1   MPNLNKLKQQFLKNWLVGLQSTTSSTTNMNFLDRKKAIKISADYAMAATRNGTTIWSQSI 60

Query: 61  IAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPL-KALAS 120
           IAK +KG  P EAILNRR  Y  L RKK  T T LRKMGR++GRKMAR    PL KAL S
Sbjct: 61  IAKYLKGHAPPEAILNRRTSYINLLRKK-RTMTQLRKMGRKIGRKMARRSRLPLSKALPS 120

Query: 121 TVAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVANYCR 176
           T+AKRLVEKRT VLRSL+PGGEFM+D+ LL+EEALDY+ FLQAQVDGMRF+ANYC+
Sbjct: 121 TIAKRLVEKRTKVLRSLIPGGEFMKDEALLIEEALDYIPFLQAQVDGMRFLANYCK 175

[Close]

BLAST of ClCG11G012600 vs. ExPASy TrEMBL
Match: A0A0A0LM92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047790 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 1.3e-54
Identity = 124/175 (70.86%), Postives = 147/175 (84.00%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTN-TNMNFLERKKAIKMAADHAMAAMRNGATIWSRA 60
           M NPNKLKQ+FL+KWLVGL+STTS++ TNMNFL+RKKAIK++AD+AMA  R G TIWS++
Sbjct: 1   MPNPNKLKQQFLKKWLVGLRSTTSSSTTNMNFLDRKKAIKISADYAMAETRKGTTIWSQS 60

Query: 61  IIAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMGRRVGRKMA-RSRSAPLKALA 120
           IIAKS+KG  P +AILNR  IY  L RKK  T T L+KMGR++GR+MA RSR    K L 
Sbjct: 61  IIAKSLKGHAPPKAILNRGTIYINLLRKK-RTMTQLQKMGRKIGRRMARRSRLPSSKVLP 120

Query: 121 STVAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVANY 174
            T+AKRLVEKRT VLRSL+PGGEFMED+VLL+EEALDY+ FLQAQVDGMRF+ANY
Sbjct: 121 RTIAKRLVEKRTKVLRSLIPGGEFMEDEVLLIEEALDYIPFLQAQVDGMRFLANY 174

[Close]

BLAST of ClCG11G012600 vs. ExPASy TrEMBL
Match: A0A6J1DKD7 (transcription factor IBH1-like 1 OS=Momordica charantia OX=3673 GN=LOC111020866 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.9e-43
Identity = 108/175 (61.71%), Postives = 131/175 (74.86%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAI 60
           M NPNKLKQ+FL KW V LK+ T++NT M+  ERKKAIKM+AD AMA+ RNG TIWSRAI
Sbjct: 1   MPNPNKLKQRFLEKWRVDLKTYTASNTTMDVSERKKAIKMSADLAMASARNGTTIWSRAI 60

Query: 61  IAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMG-RRVGRKMARSRS--APLKAL 120
           IAKSMK + P E +L+  +   KL +     TT ++  G RRVGR+  R  +   P KA 
Sbjct: 61  IAKSMKDRVPAEIVLSHPVHGVKLSKLGRKKTTMVQTKGRRRVGRRATRRSNFFPPSKAF 120

Query: 121 ASTVAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVAN 173
           A  VAKRLVEKR  VLRSLVPGGEFMED+VLL+EE LDY++FL+AQVDGMRF+A+
Sbjct: 121 ARLVAKRLVEKRRKVLRSLVPGGEFMEDEVLLIEETLDYISFLRAQVDGMRFLAS 175

[Close]

BLAST of ClCG11G012600 vs. ExPASy TrEMBL
Match: A0A6J1HLT3 (transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111465712 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.5e-39
Identity = 103/172 (59.88%), Postives = 129/172 (75.00%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAI 60
           M NP  LK+ FL+KW++GL   T +NT MNFLERKKAIK ++D AMAA RNGAT WSRAI
Sbjct: 1   MPNPINLKRIFLKKWIMGLNPITFSNTTMNFLERKKAIKASSDLAMAATRNGATRWSRAI 60

Query: 61  IAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPLKALAST 120
           IAKS+  Q P E         AKLRRK     TTL K+GR++ R+   + S+  +++A +
Sbjct: 61  IAKSI--QAPTE---------AKLRRK-----TTLHKIGRKLARR--HTHSSRSRSVARS 120

Query: 121 VAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVAN 173
           VAKRLV+KRT VLRSLVPGGEFMED+ LL++EALDY++FL+ QVDGMRF+AN
Sbjct: 121 VAKRLVQKRTKVLRSLVPGGEFMEDEALLIDEALDYISFLRVQVDGMRFLAN 154

[Close]

BLAST of ClCG11G012600 vs. TAIR 10
Match: AT4G30410.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-23
Identity = 68/172 (39.53%), Postives = 102/172 (59.30%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAI 60
           M   + + ++FL+KW +GL+    +  N +  ERKKAIK++AD AMA++R G T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPLKALAST 120
           I K+      L   +   +    L  KK+   T   +   R  +K+ R +S      A+ 
Sbjct: 61  IEKTATEDNFLVRQMLSGIKAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSASEEAAA 120

Query: 121 VAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVAN 173
            AKRLV++RT  LR++VPGGE M +DVLL++E LDY+  LQ QV+ MR + +
Sbjct: 121 KAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVD 172

[Close]

BLAST of ClCG11G012600 vs. TAIR 10
Match: AT4G30410.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-23
Identity = 68/172 (39.53%), Postives = 102/172 (59.30%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAI 60
           M   + + ++FL+KW +GL+    +  N +  ERKKAIK++AD AMA++R G T WSRA+
Sbjct: 1   MQPTSSMNEEFLKKWQMGLQIFRPSIDNTSVHERKKAIKLSADVAMASLRKGTTCWSRAL 60

Query: 61  IAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPLKALAST 120
           I K+      L   +   +    L  KK+   T   +   R  +K+ R +S      A+ 
Sbjct: 61  IEKTATEDNFLVRQMLSGIKAETLINKKLPKKTVCHRKIVRRSKKILRRKSKSASEEAAA 120

Query: 121 VAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVAN 173
            AKRLV++RT  LR++VPGGE M +DVLL++E LDY+  LQ QV+ MR + +
Sbjct: 121 KAKRLVKRRTQGLRNVVPGGELMSNDVLLLQETLDYIVSLQTQVNVMRSIVD 172

[Close]

BLAST of ClCG11G012600 vs. TAIR 10
Match: AT5G57780.1 (EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 97.8 bits (242), Expect = 9.0e-21
Identity = 68/172 (39.53%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 1   MSNPNKLKQKFLRKWLVGLKSTTSTNTN-MNFLERKKAIKMAADHAMAAMRNGATIWSRA 60
           M+  N +KQ+F++KW+  L    S+  + +N  ERK AI++++D AMAA RNG+T+WSRA
Sbjct: 2   MNTYNMVKQEFIKKWINTLHMLDSSIEHPLNVTERKNAIRLSSDLAMAAARNGSTVWSRA 61

Query: 61  IIAKSMKGQTPLEAILNRRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPLKALAS 120
           +I++S  G       + RR I  K R +       LR+ G                   +
Sbjct: 62  LISRS--GNKTANKPMARR-ILKKARNRMKNRCNILRRNG-------------------N 121

Query: 121 TVAKRLVEKRTIVLRSLVPGGEFMEDDVLLMEEALDYMTFLQAQVDGMRFVA 172
             AK  V KRT +L+SLVPGGE ++D   L+ E LDY+ +L+AQVD MR VA
Sbjct: 122 FTAKTWVRKRTDLLKSLVPGGELIDDKDYLIRETLDYIVYLRAQVDVMRTVA 151

[Close]

BLAST of ClCG11G012600 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.4e-05
Identity = 50/152 (32.89%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 17  VGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAIIAKSMKGQTPLEAILN 76
           V L S+ ST+++    +R KA++ AAD A+A    G T+WSRAI+A  +K          
Sbjct: 68  VRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIK---------- 127

Query: 77  RRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPLKAL-ASTVAKRLVEKRTIVLRS 136
             + + K RR +   T  +  M   V     RSR   +  L  +  +   V ++  VL  
Sbjct: 128 --LKFRKQRRPR--ATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGR 187

Query: 137 LVPGGEFMEDDVLLMEEALDYMTFLQAQVDGM 168
           LVPG       V+L EEA DY+  L+ QV  M
Sbjct: 188 LVPGCGKQSVPVIL-EEATDYIQALEMQVRAM 204

[Close]

BLAST of ClCG11G012600 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.4e-05
Identity = 50/152 (32.89%), Postives = 73/152 (48.03%), Query Frame = 0


Query: 17  VGLKSTTSTNTNMNFLERKKAIKMAADHAMAAMRNGATIWSRAIIAKSMKGQTPLEAILN 76
           V L S+ ST+++    +R KA++ AAD A+A    G T+WSRAI+A  +K          
Sbjct: 68  VRLNSSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIK---------- 127

Query: 77  RRMIYAKLRRKKMTTTTTLRKMGRRVGRKMARSRSAPLKAL-ASTVAKRLVEKRTIVLRS 136
             + + K RR +   T  +  M   V     RSR   +  L  +  +   V ++  VL  
Sbjct: 128 --LKFRKQRRPR--ATMAIPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGR 187

Query: 137 LVPGGEFMEDDVLLMEEALDYMTFLQAQVDGM 168
           LVPG       V+L EEA DY+  L+ QV  M
Sbjct: 188 LVPGCGKQSVPVIL-EEATDYIQALEMQVRAM 204

The following BLAST results are available for this feature:

BLAST of ClCG11G012600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890559.1	4.4e-70	84.57	transcription factor IBH1-like 1 [Benincasa hispida]	[more]
KAA0048635.1	1.6e-59	73.30	transcription factor IBH1 [Cucumis melo var. makuwa] >TYK10836.1 transcription f...	[more]
XP_008452339.1	1.1e-57	72.16	PREDICTED: uncharacterized protein LOC103493395 [Cucumis melo]	[more]
XP_004149100.1	2.6e-54	70.86	transcription factor IBH1-like 1 [Cucumis sativus] >KGN61086.1 hypothetical prot...	[more]
XP_022153351.1	6.0e-43	61.71	transcription factor IBH1-like 1 [Momordica charantia]	[more]

BLAST of ClCG11G012600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0B9	2.7e-22	39.53	Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV...	[more]
Q9C8Z9	2.0e-04	32.89	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]

BLAST of ClCG11G012600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CK75	7.6e-60	73.30	Transcription factor IBH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BT01	5.5e-58	72.16	uncharacterized protein LOC103493395 OS=Cucumis melo OX=3656 GN=LOC103493395 PE=...	[more]
A0A0A0LM92	1.3e-54	70.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047790 PE=4 SV=1	[more]
A0A6J1DKD7	2.9e-43	61.71	transcription factor IBH1-like 1 OS=Momordica charantia OX=3673 GN=LOC111020866 ...	[more]
A0A6J1HLT3	1.5e-39	59.88	transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111465712 PE=...	[more]

BLAST of ClCG11G012600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30410.2	1.9e-23	39.53	sequence-specific DNA binding transcription factors	[more]
AT4G30410.1	1.9e-23	39.53	sequence-specific DNA binding transcription factors	[more]
AT5G57780.1	9.0e-21	39.53	EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arab...	[more]
AT3G06590.1	1.4e-05	32.89	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.2	1.4e-05	32.89	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 5..172
None	No IPR available	PANTHER	PTHR33124:SF5	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 5..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G012600.2	ClCG11G012600.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding