ClCG11G011990 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G011990
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	transcription factor bHLH146-like
Location	CG_Chr11: 24481691 .. 24482278 (+)
RNA-Seq Expression	ClCG11G011990
Synteny	ClCG11G011990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGCAAATTGTGAGAAAAGGATCAAGAAGGGTATTTTCCCTAGAACCGAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTAGTTAAAATCTCTCATCATCAACAACAAAAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGTGAATTTGCTTGGGGAATTGCTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTGGCAATGGCAATGAAAATGGTTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGATGGAAAATGGGTTGATGAAGCTGAGAAAAATCATACCAGGTGGTAGTGATTTTAATGTTGGAGGTTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA

mRNA sequence

ATGGGAAGGCAAATTGTGAGAAAAGGATCAAGAAGGGTATTTTCCCTAGAACCGAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTAGTTAAAATCTCTCATCATCAACAACAAAAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGTGAATTTGCTTGGGGAATTGCTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTGGCAATGGCAATGAAAATGGTTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGATGGAAAATGGGTTGATGAAGCTGAGAAAAATCATACCAGGTGGTAGTGATTTTAATGTTGGAGGTTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA

Coding sequence (CDS)

ATGGGAAGGCAAATTGTGAGAAAAGGATCAAGAAGGGTATTTTCCCTAGAACCGAACAAAGTTGCATACACCATGTTTGCAAGAAACTATGTCAAATATTTGATGACATCTTTAGTTAAAATCTCTCATCATCAACAACAAAAAAATTTTCAGAAACTTGTGAAGTTTGAAGTTGACATGGCAATGGCTCTATCAGCAAGTGAATTTGCTTGGGGAATTGCTCTAAAAAAGAAGCTTCTTCAAAGAGAAGTTGGCAATGGCAATGAAAATGGTTTTGATTTCTCTCTCCAAACAGTCAAATTTTCTCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAGATGGAAAATGGGTTGATGAAGCTGAGAAAAATCATACCAGGTGGTAGTGATTTTAATGTTGGAGGTTTGGAAGAAGATGATTTGTTGAAACAAACTGAAAGTTATGTAAAATGTCTTGAGTTGCAAGTGAATGTTCTTAGAGGTTTGGTTGAAACAAACACATTTTAA

Protein sequence

MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLELQVNVLRGLVETNTF

Homology

[Close]

BLAST of ClCG11G011990 vs. NCBI nr
Match: XP_038877916.1 (transcription factor bHLH146-like [Benincasa hispida])

HSP 1 Score: 240.7 bits (613), Expect = 1.0e-59
Identity = 150/202 (74.26%), Postives = 161/202 (79.70%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHH------QQQKNFQKLV 60
           MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVK+LMTSLVKISHH      QQ++NFQK V
Sbjct: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKHLMTSLVKISHHHHQHHQQQEQNFQKFV 60

Query: 61  KFEVDMAMALSAS-EFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEE 120
           KFEVDMAMA SAS +FAWGIALKKKLLQR+   GNEN FDFSLQTVKFSQ          
Sbjct: 61  KFEVDMAMAQSASDQFAWGIALKKKLLQRD-QVGNENDFDFSLQTVKFSQ---------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTE 180
                      E   +EEEEE EEE+KME+GLMKLRKIIPGG+DFN+   E+DDLLKQTE
Sbjct: 121 -----------ENLGKEEEEEAEEEKKMEHGLMKLRKIIPGGADFNI---EDDDLLKQTE 177

Query: 181 SYVKCLELQVNVLRGLVETNTF 196
           SYVKCLELQVNVLRGLVETNTF
Sbjct: 181 SYVKCLELQVNVLRGLVETNTF 177

[Close]

BLAST of ClCG11G011990 vs. NCBI nr
Match: XP_016901419.1 (PREDICTED: uncharacterized protein At4g30180 [Cucumis melo])

HSP 1 Score: 235.7 bits (600), Expect = 3.3e-58
Identity = 152/203 (74.88%), Postives = 167/203 (82.27%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           M R+IVRKG RRVFS+EPNKVAYTMFARNYVK+LMTSLVKISH QQQ+NFQKLV+FEVDM
Sbjct: 1   MVRKIVRKG-RRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQNFQKLVRFEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQRE-----VGNGNENGFDFSLQTVKFSQEEEEEEEEEEEE 120
           AMA SASEF+WGIALKKKLLQR+     +GNG+ENGFDFSLQT+K    +    EEE+  
Sbjct: 61  AMAQSASEFSWGIALKKKLLQRDDQQEVLGNGSENGFDFSLQTMKKISHKNLGNEEEDHH 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL---EEDDLLKQT 180
           E+EEEEEEEEEEE            MENGLMKLRKIIPGG DF++GG    EEDDLLKQT
Sbjct: 121 EDEEEEEEEEEEE------------MENGLMKLRKIIPGGDDFSIGGNNLDEEDDLLKQT 180

Query: 181 ESYVKCLELQVNVLRGLVETNTF 196
           ESYVKCLELQVNVLRGLVETNTF
Sbjct: 181 ESYVKCLELQVNVLRGLVETNTF 190

[Close]

BLAST of ClCG11G011990 vs. NCBI nr
Match: XP_011648935.1 (transcription factor bHLH146 [Cucumis sativus] >KGN61154.1 hypothetical protein Csa_021305 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 2.8e-57
Identity = 147/200 (73.50%), Postives = 164/200 (82.00%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           M R++VRKG RRVFS+EP+KVAYTMF RNYVK+LMTSLVKISH QQQ+NF+KLVKFEVDM
Sbjct: 1   MVRKMVRKG-RRVFSIEPSKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQRE---VGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEE 120
           AMA SASEF+WGIALKKKLLQR+   +GNGNENGFDFS+QTVK + +E    EEE+   E
Sbjct: 61  AMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSVQTVKKTSQENLGNEEEDHHHE 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL--EEDDLLKQTESY 180
           EEEEEEEE               MENGLMKLRKIIPGG +F++GG   EEDDLLKQTESY
Sbjct: 121 EEEEEEEE---------------MENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESY 180

Query: 181 VKCLELQVNVLRGLVETNTF 196
           VKCLELQVNVLRGLVETNTF
Sbjct: 181 VKCLELQVNVLRGLVETNTF 184

[Close]

BLAST of ClCG11G011990 vs. NCBI nr
Match: XP_023538247.1 (transcription factor bHLH146-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 216.9 bits (551), Expect = 1.6e-52
Identity = 138/197 (70.05%), Postives = 151/197 (76.65%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQ---KNFQKLVKFE 60
           MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL KISHH QQ   +NFQKLVKFE
Sbjct: 1   MGRQILRK-RKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFE 60

Query: 61  VDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEE 120
           VDMAMA SA+EF+WG ALKKKLLQRE GNG+ NGF FSLQTVKFSQ              
Sbjct: 61  VDMAMAQSATEFSWGNALKKKLLQREDGNGS-NGFGFSLQTVKFSQ-------------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVK 180
                 E  E E EE EE +E K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+K
Sbjct: 121 ------ENLEREHEEHEERKEPKIENGLMKLRKIVPGGSN---GELEEDDLFKQTESYIK 172

Query: 181 CLELQVNVLRGLVETNT 195
           CLELQVNVLR LV+TNT
Sbjct: 181 CLELQVNVLRCLVDTNT 172

[Close]

BLAST of ClCG11G011990 vs. NCBI nr
Match: XP_022938205.1 (transcription factor bHLH146-like [Cucurbita moschata])

HSP 1 Score: 212.6 bits (540), Expect = 3.0e-51
Identity = 138/197 (70.05%), Postives = 152/197 (77.16%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQ---KNFQKLVKFE 60
           MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL KISHH QQ   +NFQKLVKFE
Sbjct: 1   MGRQILRK-RKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFE 60

Query: 61  VDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEE 120
           VDMAMA SA+EF+WG ALKKKLLQRE GNG+ NGF  SLQ VKFS+              
Sbjct: 61  VDMAMAQSATEFSWGNALKKKLLQREDGNGS-NGFGLSLQRVKFSR-------------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVK 180
              E  E E+EE EE EE EE K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+K
Sbjct: 121 ---ENLEREDEEHEEREEHEERKIENGLMKLRKIVPGGSN---GELEEDDLFKQTESYIK 175

Query: 181 CLELQVNVLRGLVETNT 195
           CLELQVNVLR LV+TNT
Sbjct: 181 CLELQVNVLRCLVDTNT 175

[Close]

BLAST of ClCG11G011990 vs. ExPASy Swiss-Prot
Match: Q9SUM5 (Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.7e-12
Identity = 61/194 (31.44%), Postives = 98/194 (50.52%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           M RQI+ +  +RVFSLEPNK    +F R Y  +L+ +L K+  +  + + ++ VK EVDM
Sbjct: 1   MERQIINR-KKRVFSLEPNKNPSAVFTRKYTSHLVPALKKL--NMNKNSSKQTVKHEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEEEEE 120
           A+ALSA EFAW   L +KL          +     ++ +                     
Sbjct: 61  ALALSAQEFAWSRFLLQKLSSSSNPTTTTSSSSDGIRIL--------------------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLE 180
                  E  ++E   EE  +E  L +L+K++PGG + NV     +++L +  +Y+KCLE
Sbjct: 121 -------ERPDKEGGNEEGGIEERLRELKKLLPGGEEMNV-----EEMLSEIGNYIKCLE 158

Query: 181 LQVNVLRGLVETNT 195
           LQ   L+ +V+ +T
Sbjct: 181 LQTIALKSIVQDST 158

[Close]

BLAST of ClCG11G011990 vs. ExPASy TrEMBL
Match: A0A1S4DZN3 (uncharacterized protein At4g30180 OS=Cucumis melo OX=3656 GN=LOC103492789 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.6e-58
Identity = 152/203 (74.88%), Postives = 167/203 (82.27%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           M R+IVRKG RRVFS+EPNKVAYTMFARNYVK+LMTSLVKISH QQQ+NFQKLV+FEVDM
Sbjct: 1   MVRKIVRKG-RRVFSIEPNKVAYTMFARNYVKHLMTSLVKISHQQQQQNFQKLVRFEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQRE-----VGNGNENGFDFSLQTVKFSQEEEEEEEEEEEE 120
           AMA SASEF+WGIALKKKLLQR+     +GNG+ENGFDFSLQT+K    +    EEE+  
Sbjct: 61  AMAQSASEFSWGIALKKKLLQRDDQQEVLGNGSENGFDFSLQTMKKISHKNLGNEEEDHH 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL---EEDDLLKQT 180
           E+EEEEEEEEEEE            MENGLMKLRKIIPGG DF++GG    EEDDLLKQT
Sbjct: 121 EDEEEEEEEEEEE------------MENGLMKLRKIIPGGDDFSIGGNNLDEEDDLLKQT 180

Query: 181 ESYVKCLELQVNVLRGLVETNTF 196
           ESYVKCLELQVNVLRGLVETNTF
Sbjct: 181 ESYVKCLELQVNVLRGLVETNTF 190

[Close]

BLAST of ClCG11G011990 vs. ExPASy TrEMBL
Match: A0A0A0LJA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060350 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 1.4e-57
Identity = 147/200 (73.50%), Postives = 164/200 (82.00%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           M R++VRKG RRVFS+EP+KVAYTMF RNYVK+LMTSLVKISH QQQ+NF+KLVKFEVDM
Sbjct: 1   MVRKMVRKG-RRVFSIEPSKVAYTMFERNYVKHLMTSLVKISHQQQQQNFRKLVKFEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQRE---VGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEE 120
           AMA SASEF+WGIALKKKLLQR+   +GNGNENGFDFS+QTVK + +E    EEE+   E
Sbjct: 61  AMAQSASEFSWGIALKKKLLQRDQQVLGNGNENGFDFSVQTVKKTSQENLGNEEEDHHHE 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGL--EEDDLLKQTESY 180
           EEEEEEEE               MENGLMKLRKIIPGG +F++GG   EEDDLLKQTESY
Sbjct: 121 EEEEEEEE---------------MENGLMKLRKIIPGGDNFSIGGNLDEEDDLLKQTESY 180

Query: 181 VKCLELQVNVLRGLVETNTF 196
           VKCLELQVNVLRGLVETNTF
Sbjct: 181 VKCLELQVNVLRGLVETNTF 184

[Close]

BLAST of ClCG11G011990 vs. ExPASy TrEMBL
Match: A0A6J1FJ33 (transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.5e-51
Identity = 138/197 (70.05%), Postives = 152/197 (77.16%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQ---KNFQKLVKFE 60
           MGRQI+RK  +RV SLEPNK+AYTMFARNYVKYLMTSL KISHH QQ   +NFQKLVKFE
Sbjct: 1   MGRQILRK-RKRVLSLEPNKLAYTMFARNYVKYLMTSLPKISHHHQQHQEQNFQKLVKFE 60

Query: 61  VDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEE 120
           VDMAMA SA+EF+WG ALKKKLLQRE GNG+ NGF  SLQ VKFS+              
Sbjct: 61  VDMAMAQSATEFSWGNALKKKLLQREDGNGS-NGFGLSLQRVKFSR-------------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVK 180
              E  E E+EE EE EE EE K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+K
Sbjct: 121 ---ENLEREDEEHEEREEHEERKIENGLMKLRKIVPGGSN---GELEEDDLFKQTESYIK 175

Query: 181 CLELQVNVLRGLVETNT 195
           CLELQVNVLR LV+TNT
Sbjct: 181 CLELQVNVLRCLVDTNT 175

[Close]

BLAST of ClCG11G011990 vs. ExPASy TrEMBL
Match: A0A6J1I0E6 (transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 8.8e-49
Identity = 138/197 (70.05%), Postives = 153/197 (77.66%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHH---QQQKNFQKLVKFE 60
           MGRQI+RK  +RV SLEP+K+AYTMFARNYVKYLMTSL KISHH    QQ+NFQKLVKFE
Sbjct: 1   MGRQILRK-RKRVLSLEPDKLAYTMFARNYVKYLMTSLPKISHHHQQHQQQNFQKLVKFE 60

Query: 61  VDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEE 120
           VDMAMA SA+EF+WG ALKKKLLQRE  NG+ NGF FSL  VKFS+              
Sbjct: 61  VDMAMAQSATEFSWGNALKKKLLQREDDNGS-NGFGFSL-PVKFSR-------------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVK 180
           E  E E+EE EE EE EE EE K+ENGLMKLRKI+PGGS+   G LEEDDL KQTESY+K
Sbjct: 121 ENLEREDEEHEEHEEHEEREERKIENGLMKLRKIVPGGSN---GELEEDDLFKQTESYIK 177

Query: 181 CLELQVNVLRGLVETNT 195
           CLELQVNVLR LV+TNT
Sbjct: 181 CLELQVNVLRCLVDTNT 177

[Close]

BLAST of ClCG11G011990 vs. ExPASy TrEMBL
Match: A0A6J1DIU0 (transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 8.8e-49
Identity = 131/199 (65.83%), Postives = 147/199 (73.87%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           MGRQIVRK  RRVFSLEPNK+ Y MFARNY K LM SL KIS + Q  N QK+VKFEVDM
Sbjct: 1   MGRQIVRK-RRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQ--NLQKVVKFEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQR-EVGNGN-ENGFDFSLQTVKFSQEEEEEEEEEEEEEEE 120
           AMALSASEFAWG ALK+KLLQ+ E GNGN  N FDFSLQT+KFS+               
Sbjct: 61  AMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKFSR--------------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGG---SDFNVGGLEEDDLLKQTESY 180
                     E+EEEEEE+++KMENGL+KLRKI+PGG   +D N   LEEDDLLKQTESY
Sbjct: 121 ----------EKEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESY 171

Query: 181 VKCLELQVNVLRGLVETNT 195
           +KCLELQVNVLR LV+TNT
Sbjct: 181 IKCLELQVNVLRCLVDTNT 171

[Close]

BLAST of ClCG11G011990 vs. TAIR 10
Match: AT4G30180.1 (sequence-specific DNA binding transcription factors;transcription regulators )

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-13
Identity = 61/194 (31.44%), Postives = 98/194 (50.52%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKISHHQQQKNFQKLVKFEVDM 60
           M RQI+ +  +RVFSLEPNK    +F R Y  +L+ +L K+  +  + + ++ VK EVDM
Sbjct: 1   MERQIINR-KKRVFSLEPNKNPSAVFTRKYTSHLVPALKKL--NMNKNSSKQTVKHEVDM 60

Query: 61  AMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEEEEEEE 120
           A+ALSA EFAW   L +KL          +     ++ +                     
Sbjct: 61  ALALSAQEFAWSRFLLQKLSSSSNPTTTTSSSSDGIRIL--------------------- 120

Query: 121 EEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESYVKCLE 180
                  E  ++E   EE  +E  L +L+K++PGG + NV     +++L +  +Y+KCLE
Sbjct: 121 -------ERPDKEGGNEEGGIEERLRELKKLLPGGEEMNV-----EEMLSEIGNYIKCLE 158

Query: 181 LQVNVLRGLVETNT 195
           LQ   L+ +V+ +T
Sbjct: 181 LQTIALKSIVQDST 158

[Close]

BLAST of ClCG11G011990 vs. TAIR 10
Match: AT2G18969.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;transcription regulators (TAIR:AT4G30180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 61.6 bits (148), Expect = 8.0e-10
Identity = 71/199 (35.68%), Postives = 112/199 (56.28%), Query Frame = 0


Query: 1   MGRQIVRKGSRRVFSLEPNKVAYTMFARNYVKYLMTSLVKI-----SHHQQQKNFQKLVK 60
           M RQI+ K  +RVFSL+PNK    +FAR YV +L+ +L KI     S    +++ ++ VK
Sbjct: 1   MERQIINK-RKRVFSLQPNKNPKAVFARRYVSHLVPALKKINMNKSSSKTNKQSLEQTVK 60

Query: 61  FEVDMAMALSASEFAWGIALKKKLLQREVGNGNENGFDFSLQTVKFSQEEEEEEEEEEEE 120
            EVDMA ALSA EFAW   L++KLL         + +D  + T                E
Sbjct: 61  HEVDMAFALSAQEFAWSRFLQQKLL--------SSPYDDPIST-----------SSSPSE 120

Query: 121 EEEEEEEEEEEEEEEEEEEEEEEEKMENGLMKLRKIIPGGSDFNVGGLEEDDLLKQTESY 180
             E   + +  E+ ++ +EEEE  +++  L +L+K++PGG + N+     +++L +  SY
Sbjct: 121 ILERSSKRQGGEKHQDSDEEEEGGEIKKRLKELQKLLPGGEEMNM-----EEILSEIGSY 174

Query: 181 VKCLELQVNVLRGLVETNT 195
           + CLELQ+ VL+ +V+ NT
Sbjct: 181 IVCLELQMIVLKSIVQDNT 174

The following BLAST results are available for this feature:

BLAST of ClCG11G011990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877916.1	1.0e-59	74.26	transcription factor bHLH146-like [Benincasa hispida]	[more]
XP_016901419.1	3.3e-58	74.88	PREDICTED: uncharacterized protein At4g30180 [Cucumis melo]	[more]
XP_011648935.1	2.8e-57	73.50	transcription factor bHLH146 [Cucumis sativus] >KGN61154.1 hypothetical protein ...	[more]
XP_023538247.1	1.6e-52	70.05	transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938205.1	3.0e-51	70.05	transcription factor bHLH146-like [Cucurbita moschata]	[more]

BLAST of ClCG11G011990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUM5	1.7e-12	31.44	Transcription factor bHLH146 OS=Arabidopsis thaliana OX=3702 GN=BHLH146 PE=2 SV=...	[more]

BLAST of ClCG11G011990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DZN3	1.6e-58	74.88	uncharacterized protein At4g30180 OS=Cucumis melo OX=3656 GN=LOC103492789 PE=4 S...	[more]
A0A0A0LJA7	1.4e-57	73.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060350 PE=4 SV=1	[more]
A0A6J1FJ33	1.5e-51	70.05	transcription factor bHLH146-like OS=Cucurbita moschata OX=3662 GN=LOC111444354 ...	[more]
A0A6J1I0E6	8.8e-49	70.05	transcription factor bHLH146-like OS=Cucurbita maxima OX=3661 GN=LOC111468586 PE...	[more]
A0A6J1DIU0	8.8e-49	65.83	transcription factor bHLH146 OS=Momordica charantia OX=3673 GN=LOC111020869 PE=4...	[more]

BLAST of ClCG11G011990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30180.1	1.2e-13	31.44	sequence-specific DNA binding transcription factors;transcription regulators	[more]
AT2G18969.1	8.0e-10	35.68	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 96..151
None	No IPR available	GENE3D	3.30.70.2850		coord: 7..177 e-value: 6.7E-6 score: 28.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..142
None	No IPR available	PANTHER	PTHR33124:SF42	TRANSCRIPTION FACTOR BHLH146	coord: 10..194
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 10..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G011990.1	ClCG11G011990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0005488	binding