ClCG11G010930 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG11G010930
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionProline-rich protein HaeIII subfamily 1-like
LocationCG_Chr11: 21517619 .. 21518143 (+)
RNA-Seq ExpressionClCG11G010930
SyntenyClCG11G010930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGCCAATTAGTTCTTGTAATGTGTTTTCCGGAGCTTGTGCTCTCATGCTCCTTGGGCTACACATTGCAATCTACCAAGCAGTTGCTAAAAATATTTTCATTGACGACGGAGGCTTCCCTATTATAGACAACGTATTGAGTGACCCGAGTATAAAACATCCAAAAAGGCATATCCTTTTCTCACAAGGGAAACCCAAGAAGGTACCTGACTTAGATCCGCCTTTCACCAGTGGAGTACTATCGAAAGACGGGCGCACTCCCCTGTCTGGACCGAGTCCAAGAACTTCGGACAATCCACATCCTCCACCGCATGTCTCATCCACCATTTTACATAAGAAATCTATGATCAACTTCAGAATGTTACCAAAAAATGAGCGTATTCCTCGATCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTACCCCACAGCATGTCCCATCCGTCATTTTACGCAAGGAATCTGGTATTGACTTTGAAATATTACCAAAAGGCGTCCACATGCTCCTTTCTTTATTTTAA

mRNA sequence

ATGGTGCCAATTAGTTCTTGTAATGTGTTTTCCGGAGCTTGTGCTCTCATGCTCCTTGGGCTACACATTGCAATCTACCAAGCAGTTGCTAAAAATATTTTCATTGACGACGGAGGCTTCCCTATTATAGACAACGTATTGAGTGACCCGAGTATAAAACATCCAAAAAGGCATATCCTTTTCTCACAAGGGAAACCCAAGAAGGTACCTGACTTAGATCCGCCTTTCACCAGTGGAGTACTATCGAAAGACGGGCGCACTCCCCTGTCTGGACCGAGTCCAAGAACTTCGGACAATCCACATCCTCCACCGCATGTCTCATCCACCATTTTACATAAGAAATCTATGATCAACTTCAGAATGTTACCAAAAAATGAGCGTATTCCTCGATCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTACCCCACAGCATGTCCCATCCGTCATTTTACGCAAGGAATCTGGTATTGACTTTGAAATATTACCAAAAGGCGTCCACATGCTCCTTTCTTTATTTTAA

Coding sequence (CDS)

ATGGTGCCAATTAGTTCTTGTAATGTGTTTTCCGGAGCTTGTGCTCTCATGCTCCTTGGGCTACACATTGCAATCTACCAAGCAGTTGCTAAAAATATTTTCATTGACGACGGAGGCTTCCCTATTATAGACAACGTATTGAGTGACCCGAGTATAAAACATCCAAAAAGGCATATCCTTTTCTCACAAGGGAAACCCAAGAAGGTACCTGACTTAGATCCGCCTTTCACCAGTGGAGTACTATCGAAAGACGGGCGCACTCCCCTGTCTGGACCGAGTCCAAGAACTTCGGACAATCCACATCCTCCACCGCATGTCTCATCCACCATTTTACATAAGAAATCTATGATCAACTTCAGAATGTTACCAAAAAATGAGCGTATTCCTCGATCTGGGCCGAGCCAAAGAACTTCAGAGAGTCCACCTACCCCACAGCATGTCCCATCCGTCATTTTACGCAAGGAATCTGGTATTGACTTTGAAATATTACCAAAAGGCGTCCACATGCTCCTTTCTTTATTTTAA

Protein sequence

MVPISSCNVFSGACALMLLGLHIAIYQAVAKNIFIDDGGFPIIDNVLSDPSIKHPKRHILFSQGKPKKVPDLDPPFTSGVLSKDGRTPLSGPSPRTSDNPHPPPHVSSTILHKKSMINFRMLPKNERIPRSGPSQRTSESPPTPQHVPSVILRKESGIDFEILPKGVHMLLSLF
Homology
BLAST of ClCG11G010930 vs. NCBI nr
Match: XP_038882352.1 (uncharacterized protein LOC120073615 [Benincasa hispida])

HSP 1 Score: 207.6 bits (527), Expect = 8.6e-50
Identity = 108/169 (63.91%), Postives = 124/169 (73.37%), Query Frame = 0

Query: 1   MVPISSCNVFSGACALMLLGLHIAIYQAVAKNIFIDDGGFPIIDNVLSDPSIKHPKRHIL 60
           MV IS  NVF GACA + LGLH  IYQ  AKN+F+ + G   I+N LSD +IKHPKRHI 
Sbjct: 1   MVSISYSNVFFGACAFIFLGLHSTIYQTDAKNVFVVEKGDSTIENELSDENIKHPKRHIH 60

Query: 61  FSQGKPKKVPDLDPPFTSGVLSKDGRTPLSGPSPRTSDNPHPPPHVSSTILHKKSMINFR 120
           FS GK K++PDL PPF  G+LSK+ R P SG S  TSDNP PPPHV S ILHK+S INFR
Sbjct: 61  FSLGKYKRIPDLAPPFNLGILSKEERVPPSGLSQSTSDNPPPPPHVISIILHKESRINFR 120

Query: 121 MLPKNERIPRSGPSQRTSESPPTPQHVPSVILRKESGIDFEILPKGVHM 170
           +L K  RIP SGPSQRTSESPP P H  SVIL K+ GI+F ILPK +H+
Sbjct: 121 VLSKGNRIPPSGPSQRTSESPPPPPHALSVILHKKPGINFGILPKSMHI 169

BLAST of ClCG11G010930 vs. NCBI nr
Match: KAA0040932.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK10605.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 152.5 bits (384), Expect = 3.3e-33
Identity = 87/162 (53.70%), Postives = 107/162 (66.05%), Query Frame = 0

Query: 8   NVFSGACALMLLGLHIAIYQAVAKNIFIDDGGFPIIDNVLSDPSIKHPKRHILFSQGKPK 67
           N+F  ACAL+ LGLH  IY   AK  F+ D     ++NVL    I HPK+   FS  KPK
Sbjct: 7   NIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHFSWPKPK 66

Query: 68  KVPDLDPPFTSGVLSKDGRTPLSGPSPRTSDNPHPPPHVSSTILHKKSMINFRMLPKNER 127
           K+PDL PPF+ G+LSK  RTP SG S  TS+NP P PHV+  ILHK+SM+NF +LPK  R
Sbjct: 67  KIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNP-PSPHVAPIILHKESMVNFGILPKGVR 126

Query: 128 IPRSGPSQRTSESPPTPQHVPSVILRKESGIDFEILPKGVHM 170
           IP SGPS+RTS+ PP   +  S+   KES I + ILPKGV +
Sbjct: 127 IPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRI 164

BLAST of ClCG11G010930 vs. NCBI nr
Match: KAA0043502.1 (proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK01137.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 127.1 bits (318), Expect = 1.5e-25
Identity = 81/169 (47.93%), Postives = 101/169 (59.76%), Query Frame = 0

Query: 1   MVPISSCNVFSGACALMLLGLHIAIYQAVAKNIFIDDGGFPIIDNVLSDPSIKHPKRHIL 60
           M+ ISS N+    CA++LLGLH  IYQ   +N+F       + +N L   SI HPK++I 
Sbjct: 1   MMSISS-NMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIH 60

Query: 61  FSQGKPKKVPDLDPPFTSGVLSKDGRTPLSGPSPRTSDNPHPPPHVSSTILHKKSMINFR 120
           FS  K K  P+ D  F  G+ SKD R P SGPS R+SD+P  P    S IL K+S INF 
Sbjct: 61  FSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP----SMILPKESRINFG 120

Query: 121 MLPKNERIPRSGPSQRTSESPPTPQHVPSVILRKESGIDFEILPKGVHM 170
           +LPK  RIP SGPSQR S+SP      PS  L K S + F +LPKG H+
Sbjct: 121 ILPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHI 160

BLAST of ClCG11G010930 vs. NCBI nr
Match: XP_031744042.1 (proline-rich receptor-like protein kinase PERK9 [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-24
Identity = 75/154 (48.70%), Postives = 97/154 (62.99%), Query Frame = 0

Query: 14  CALMLLGLHIAIYQAVAKNIFIDDGGFPIIDNVLSDPSIKHPKRHILFSQGKPKKVPDLD 73
           C L+LLGL   +YQ    N+F  +    +++N      I HPK+HI FS+ K K++PD D
Sbjct: 6   CVLVLLGL---LYQTNGINLFEVNEENSVLENEFKAHVIIHPKQHIRFSRTKSKRIPDFD 65

Query: 74  PPFTSGVLSKDGRTPLSGPSPRTSDNPHPPPHVSSTILHKKSMINFRMLPKNERIPRSGP 133
                G+LSK  R P SGPS R+SD+  PP    S +LHK+SM+NF +LPK      SGP
Sbjct: 66  THSGFGILSKAIRIPPSGPSQRSSDSTPPP----SIVLHKESMMNFGILPKGVPTHSSGP 125

Query: 134 SQRTSESPPTPQHVPSVILRKESGIDFEILPKGV 168
           SQR S+SPP+P   PS++L KES I F ILPKGV
Sbjct: 126 SQRFSDSPPSPP--PSIVLHKESRIKFGILPKGV 150

BLAST of ClCG11G010930 vs. NCBI nr
Match: KAA0038012.1 (hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK02206.1 hypothetical protein E5676_scaffold2454G00110 [Cucumis melo var. makuwa])

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-22
Identity = 81/220 (36.82%), Postives = 103/220 (46.82%), Query Frame = 0

Query: 5   SSCNVFSGACALMLLGLHIAIYQAVAKNIFIDDGGFPIIDNVLSDPSIKHPKRHILFSQG 64
           +S NV  GACAL+LLG H   Y   A+   +   G  +I+N L+D  I+HPKRHI FS  
Sbjct: 4   TSSNVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIRFSWP 63

Query: 65  KPKKVPDLDPPFTSGVLSKDGRTPLSGPSPRTSDNPHPPPHV------------------ 124
           KPK+VPDL PPF+ G+L+KD  TP S      +   HP  H+                  
Sbjct: 64  KPKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPDLAPP 123

Query: 125 --------------------SSTILHKKSMINFR-----------------MLPKNERIP 170
                                S   H KS I F                  +L K+ R P
Sbjct: 124 FSLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKDVRTP 183

BLAST of ClCG11G010930 vs. ExPASy TrEMBL
Match: A0A5D3CGG1 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold315G00020 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.6e-33
Identity = 87/162 (53.70%), Postives = 107/162 (66.05%), Query Frame = 0

Query: 8   NVFSGACALMLLGLHIAIYQAVAKNIFIDDGGFPIIDNVLSDPSIKHPKRHILFSQGKPK 67
           N+F  ACAL+ LGLH  IY   AK  F+ D     ++NVL    I HPK+   FS  KPK
Sbjct: 7   NIFFRACALIFLGLHFEIYLTNAKRSFVVDEDNSSLENVLRGDIINHPKKVAHFSWPKPK 66

Query: 68  KVPDLDPPFTSGVLSKDGRTPLSGPSPRTSDNPHPPPHVSSTILHKKSMINFRMLPKNER 127
           K+PDL PPF+ G+LSK  RTP SG S  TS+NP P PHV+  ILHK+SM+NF +LPK  R
Sbjct: 67  KIPDLAPPFSLGILSKGIRTPPSGLSQGTSNNP-PSPHVAPIILHKESMVNFGILPKGVR 126

Query: 128 IPRSGPSQRTSESPPTPQHVPSVILRKESGIDFEILPKGVHM 170
           IP SGPS+RTS+ PP   +  S+   KES I + ILPKGV +
Sbjct: 127 IPPSGPSRRTSDPPPPLSNFHSI---KESRIKYGILPKGVRI 164

BLAST of ClCG11G010930 vs. ExPASy TrEMBL
Match: A0A5D3BP86 (Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00050 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 7.2e-26
Identity = 81/169 (47.93%), Postives = 101/169 (59.76%), Query Frame = 0

Query: 1   MVPISSCNVFSGACALMLLGLHIAIYQAVAKNIFIDDGGFPIIDNVLSDPSIKHPKRHIL 60
           M+ ISS N+    CA++LLGLH  IYQ   +N+F       + +N L   SI HPK++I 
Sbjct: 1   MMSISS-NMTFKTCAIVLLGLHFGIYQTNGRNLFEVKEDNSVFENELKANSIIHPKQYIH 60

Query: 61  FSQGKPKKVPDLDPPFTSGVLSKDGRTPLSGPSPRTSDNPHPPPHVSSTILHKKSMINFR 120
           FS  K K  P+ D  F  G+ SKD R P SGPS R+SD+P  P    S IL K+S INF 
Sbjct: 61  FSLTKSKGKPEFDTHFRFGIFSKDVRIPPSGPSQRSSDSPPSP----SMILPKESRINFG 120

Query: 121 MLPKNERIPRSGPSQRTSESPPTPQHVPSVILRKESGIDFEILPKGVHM 170
           +LPK  RIP SGPSQR S+SP      PS  L K S + F +LPKG H+
Sbjct: 121 ILPKGSRIPPSGPSQRFSDSPLP----PSTFLHKGSNMIFGMLPKGHHI 160

BLAST of ClCG11G010930 vs. ExPASy TrEMBL
Match: A0A5D3BVE5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2454G00110 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 7.4e-23
Identity = 81/220 (36.82%), Postives = 103/220 (46.82%), Query Frame = 0

Query: 5   SSCNVFSGACALMLLGLHIAIYQAVAKNIFIDDGGFPIIDNVLSDPSIKHPKRHILFSQG 64
           +S NV  GACAL+LLG H   Y   A+   +   G  +I+N L+D  I+HPKRHI FS  
Sbjct: 4   TSSNVLFGACALILLGFHFETYHIDARRFSVVGEGNYVIENQLTDHVIEHPKRHIRFSWP 63

Query: 65  KPKKVPDLDPPFTSGVLSKDGRTPLSGPSPRTSDNPHPPPHV------------------ 124
           KPK+VPDL PPF+ G+L+KD  TP S      +   HP  H+                  
Sbjct: 64  KPKRVPDLAPPFSLGILTKDVLTPPSENEVGDNIVKHPKNHIRFSWIWPKPKRVPDLAPP 123

Query: 125 --------------------SSTILHKKSMINFR-----------------MLPKNERIP 170
                                S   H KS I F                  +L K+ R P
Sbjct: 124 FSLGILNNHLRTPPSENELGHSITKHPKSHIRFSWPKPKRVPDLAPPFSLGILSKDVRTP 183

BLAST of ClCG11G010930 vs. ExPASy TrEMBL
Match: A0A5A7T8R0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001740 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 4.1e-21
Identity = 58/97 (59.79%), Postives = 64/97 (65.98%), Query Frame = 0

Query: 41  PIIDNVLSDPSIKHPKRHILFSQGKPKKVPDLDPPFTSGVLSKDGRTPLSGPSPRTSDNP 100
           P  +N L     KHPK HI FS  KPK+VPDL PPF+ G+L KD RTP  G S RT DNP
Sbjct: 143 PPSENELGHSITKHPKNHIRFSWPKPKRVPDLAPPFSLGILLKDVRTPPFGSSQRTLDNP 202

Query: 101 HPPPHVSSTILHKKSMINFRMLPKNERIPRSGPSQRT 138
            PPPH    ILHKKS I F +LPK  R+P SGPS RT
Sbjct: 203 SPPPHAVPIILHKKSKIKFGILPKGVRVPPSGPSVRT 239

BLAST of ClCG11G010930 vs. ExPASy TrEMBL
Match: A0A6J1HRH7 (actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3661 GN=LOC111467141 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 6.5e-19
Identity = 66/146 (45.21%), Postives = 83/146 (56.85%), Query Frame = 0

Query: 25  IYQAVAKNIFIDDGGFPIIDNVLSDPSIKHPKRHILFSQGKPKKV---PDLDPPFTSGVL 84
           IY+  AKN+   D    I +  L+D  +++PK   + S    ++        P    G+L
Sbjct: 185 IYETDAKNVVEVDVDDNIREAELTDLIVQNPKGISISSSRSSQRTLFHRTPSPSLVFGML 244

Query: 85  SKDGRTPLSGPSPRTSDNPHPPPHVSSTILHKKSMINFRMLPKNERIPRSGPSQRTSESP 144
            K    P S PS RTSD P PPP  SS IL+K S IN  MLP+   IP SGPSQRTS+ P
Sbjct: 245 PKGVPIPPSRPSQRTSDYPPPPPRASSIILNKHSKINLGMLPRGVPIPPSGPSQRTSDYP 304

Query: 145 PTPQHVPSVILRKESGIDFEILPKGV 168
           P P H  SVIL K+S I+F +LPKGV
Sbjct: 305 PPPPHASSVILNKQSKINFGMLPKGV 330

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038882352.18.6e-5063.91uncharacterized protein LOC120073615 [Benincasa hispida][more]
KAA0040932.13.3e-3353.70proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK1060... [more]
KAA0043502.11.5e-2547.93proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa] >TYK0113... [more]
XP_031744042.11.6e-2448.70proline-rich receptor-like protein kinase PERK9 [Cucumis sativus][more]
KAA0038012.11.5e-2236.82hypothetical protein E6C27_scaffold36G002040 [Cucumis melo var. makuwa] >TYK0220... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CGG11.6e-3353.70Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5D3BP867.2e-2647.93Proline-rich protein HaeIII subfamily 1-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A5D3BVE57.4e-2336.82Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T8R04.1e-2159.79Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A6J1HRH76.5e-1945.21actin cytoskeleton-regulatory complex protein PAN1-like OS=Cucurbita maxima OX=3... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..145

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G010930.1ClCG11G010930.1mRNA