ClCG11G010760 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G010760
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	GDT1 family protein
Location	CG_Chr11: 20975027 .. 20980381 (-)
RNA-Seq Expression	ClCG11G010760
Synteny	ClCG11G010760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTGGATCTCTAGCTTCGAAGAAGGATCTCTCTCTCTCTCTCTCTCTCTCTATCTCTGTATCGCGAATTCAAGTTGTGGTGATGTACAATTGCAGCAAAGCAATGCAGATCTGATCTTCCTTTTCAATTGAGGGATCCCACACTCTCAATTTCTTCTCCGATTCAGATCCCCGTCTACAAACAACTAATTCCATCCACTATCTTCTTAATCCCTTTTTCCTTCAATGGGTTTGCGTTCAAACCCTACTGCTAACCTCTCTTTCTCTCCTTCTTTTCTCCTCCTTCTGCTTCTTCTTTCTCTCTTTGCCTCCCTTCAGGTATTCATCTAACATTTCTCTTCCTTTTCTTTCTTTCTTTATGGCGTTCTTATGTATGGTTTGATTTGTATTCTCTGTTGGATGTTTGTAAGGTGTATTCTGCGGAAGTGGAGAAAGATGAGTTGGATGGACCTAAAGATCTCGGTCGACGTAGCAAGGTGAGTACGATTCATTATCTTTCTTGTTATGCTTTGTATAAAGTGGTTTTATGGTGTATGTGAAATTCTTGACGGATTGTGAATCTGCGGTGCCGGCCATGGCAGGGGAGGGGGTTTTGGGGTTAGATTGAGATCTTTGTGCTTTTTGACTTAATTGTTTTCCTTCTTGTACATTTTAAATAGAACTAACTATCGAGATACACTCTTGACCGTATGAAAAGGGAAAAAAAAAAAAAAAAAACCCAATTGTAATTCCAGGGGCTGTAAGGAAGATGGCATTTTGGTATTTTGTACCATGTAGCTAATACCTTTTAACTTTGCGTGTGTCACTAGGTGGTGCTGGTTTTGTTTTGGAGAACTTGAAGGTCAACTGACTTGAGTTTAGGATTTTTTAGGAGCTTGTTGGGAGTGTTTGAGCATGTGACCTTTTAGAGCTGTGTGCAATTTTGAAGGCTGTTTGAAACATATTGATTCATATGTTTTCACTTATTTTTATTTATATTAACTTGAAAAAATGTAATGTGTTTAAATCACCTCATACTTAAAAAGCAATTAGTAATTGAATATGGAGTATTATTTTTAGAACTACTTAGAAAATATTTAAAATTATGTTTTTCTGATATTCTTTCTTTAAAAAGTATGTAACAGGCATGTTTTGTTAGCCAGAAATTAGGGAATTTTAGTAAGGCTTCCAAACACTCTAAGCAACCTTATTAGAGATTTAATAACCTTAGTTGTTTGCTCTCCCTCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCTTTTTTTCTTTCTTTTTTTTCTTTTCTTTCTGGCATTGGCTTCTATTTTGAGTAACGACTCTTTTGCCTTGTTTGGAGCATCTTGTTTGGCCATTCTGAAAGCTAAAAGAATTCGAGATCAAAATGCGAGTCCCAATTGATCATTTCCCTTTTCTTTTCTTCTTTAAATTCTAGTTTCAGTTCTTTCATGATGTTATTCTCGTATGTATTTCCCTTCACTAGATTTCGTGGAGCAACAGTGACACAGTTGCTGCAAAAAAGGATGGTGTTGACTCAGAAGATCTTAATCTTGATATGGACTCCATTGGTCTTGGAGTTTTTGACGCATTTTTTGCGAGTTTGTCCATGATAATTGTCAGTGAGGTTGGTGTAGTTGATTATCTATCCTCACTTATACTTTATGTGAACTTTTTCAGAAAAAATGGTCCATTTCTAAACTGCACTTGGGTGAATTTGTCTATCGTTCAATCGAGTTAAACTGCTTGTTTGTTTGAGTTCAATCATTTTAATTTTTCTGTGTGTAGATTGGAGATGAGACATTTATAATCGCTGCACTTATGGCTATGCGCCACCCGAAGTCCATTGTTTTATCTGGAGCGCTCGCTGCCCTGATTGTAATGACAGTAAGTTGAATAAATCTTTCATTTTCATCTAGCCCCTTGGATAATAATTTATTTTAAGTATCCAGCTTATTTTTATTGTATGGTTCAGTATTTTTTTTTTGGGATTCTTTAGCAATTGCTCGCCGATATTCTTACTCTGGTGAATAAGAGTACAACTATTTCCATGTCCATTAGGTACTCTCAACTGGTTTAGGTAGAATAGTTCCGAATTTGATATCAAGGAAACATACCAATAATGCTGCTACAGGTACATACATAGTATCTTACTCTTTTTTGAGTATGTCTATTTGTAGAGAACTGTTACTCTTTTTTGAGTATGTTTATTTGTAGAGAACTGTGTGGTGCTATTCGTTCTATTTTGACTATCTTTTGGGAGTATTTTTTCTAATATATATTTCCTGATTAGTCGTTACCTTCTGATTCCCCTACTGTTGTAACTCCATCCATACAAAGGGTGGATAGTTTAGACAATTTTCTTCAGTTATTGCACCGCCCCAATTAGTTGTAACTTTCCTCTTCACTACAATGAAAAGAAAAAGAAAACAATCATCTTCAGATTGACCTAGTTTTAGTGGTATCTATACGTATCAATCAATAAATAGAACTTCTATATATAGAATGCAGAAGATGGGTTGAATACGAAATCCTGACTTCAAATTTTCTACCTATGCAAAAGGCTTGCTACCAAGAGAAAAGCCTTCTAAAAGCATCTCAGCCTCAAAGGAAGGAGTTGAATTGAAGAGTAAAGTCTCACTAATATCCCTACCGCCTGTGGCAATAAGAAAGAGTTGGTGATTTTGTCATCCGAGTGAGACCAAATGATCTGGATTTTTGATGTAGTTTTGGTCCCAACCAAGGGGAATTGACCGTACTAAACTTGGTTAAATTTTGGAAAAAATACCTTTCTGGTCTCTAGGTTTGGGTTTAGTTTCCATTTAGTCTCTAGTTTTAAAATATTACACTTTTATCCTGAGTTTTGAGTTTAATTTTTACAACTTACAAACTTAACAAGCTTAGTGAATTCAAACCATGGTTAAGATAGAAATTTTGAGCCATGCATCACTTTAACAACTTAATATAAAGCTGGGGTCGGTTTTATCTGTTGTCTTTTAATCCTGCACTTTATGTACATTCACATATTAAATTTAAGTTGACGCATTGCTTTAATAACTACTGCTTGTCATTTTGGGCTGTTGTTATAATGGTACCTTTCTTTCCAGATGATGAGACTACATTTGTTGTTTTTCCTGTTACTGTGGCTCTGCCTAAGTTGCATACTTCTGCTAGAGTTTTTATTTTTGTTTGTTTCTTCTGATATCAATTATAGTGTTGTCAGCCTACGTCCTAATATTGTTTTCTGCAGTTCTGTACGCATTTTTTGGATTGCGGTTACTTTACATTGCTTGGAGATCCAAATCAGATTCAAAATCCTCAACGAAAAAGGAAATGGAAGAAGTATGCTATCCTCAATATCTTTTTGCAGTTATTGTTTACCTTTATTTTGTATGATTTGTGTCTGCATTTCTCTTTGTTTTCTTGTATTCATTTTTATTCTTGAAGCTCTTTGGATGTTTTTTAGTAAAACATTTGATGATTGACGATCTATTACATGAAGATAATCATAACTTTGGCAGTTTATCTTTTTCCCCTGTTTTTAATAGCATTTACTTGAGGCATTTATCTGTTATTTAATAAATAAATGGAAATAGAGGGTAAAATGGATAAATAGCTAGTTCAATACTGGAGGGCCTTGTTTAGTTTGCCTGATGGCAATGTTTAGATGGTCTGTTACATTCCTTATATACAACACCTCTCTATATTTTTTATAATCTTTTCCCATGTCTAGATTGATTCATACAATGTTCTAACTGTAAGATTACCTGAAAAAATATTTCATGTTTGATAGTGATGTTAATTGCTATCTGCTATTCATTGACTTGGATTTGAAAATTTTTGTTCTTTACACTATAATTCTCCTTGTAGTGTCATAAAAATATTTAAAACCATTCTGAATATTGTTACTTGTCTTTTATGCCTTGAGTGAATTTGAATAAATAGATCTATAATTCACAAGTCTCCATATTGTTATCTCACTTTTAAGAAAGCATGTGGCTGTTTTGGCTACATATGGAATTTAATCTTTAGGATCATGAATATATATAGTCTATCGATTAGCCTTTCCTCGTTTGTTAGTATCGGTTGATGACCTTTGTTCAGTCAATGTGAGAATAGCTTATTGTCCACTCTTATTCGCTAAATTGACTTCTAATCATGTGTTCAGGTAGAGGAGAAGCTTGAGGCTGGACAATCCAAGACGACCTTCCGACGCTTCTTTTTGCGATTTTGCACACCCATATTCTTGGAGGTCCACAAACTACTATAACACTGACTTAACAATAAATTTTTCAGACTGGCTGCGTGTCTAACATTATTATTCTTTCTTTTTTCTTTCCTCTTTCTTCTATTAGTTTCATATATATAACTCGTAAGCTGATTTTGGTGATCGTTTTGGCTTTGCAGTCATTTATTTTGACATTTCTTGCTGAATGGGGGGATCGGAGTCAGATAGCAACAATTGCTGTGAGTTCCTTCCTAGAATCTTCTATTTAGTTTGTTTGATATCATCTAGTCGGTCCTGGTTAGTGTCCAATATTTTACTTTCATGGAAGTTGAATTTAACCATGGTTTCGATGGTTTTTATATTCGAGAAGCAATGACGATACCTCGCCTTTTATTTTCATTAATCATTTAGCATGAATCTGAATTGATTTAGAAACTCGAAATCTAACTTATTGCATGTGACTTGAAAGATAGGAAGAAAAGACGTCTGTATGAGTTTTATGTTAAAAGATGTACCAAAAAACTAATAGACACATGACTAGAACTGTTTGTGTTTTGCCCCTACAACATTCAGAATGTTGAAAAGCATGAAGATGAAGATGGAATAATAGATCAAGAAGCATTTTAAGTCATAACTACTGTATTTAATGGAATAAAAGACCAAGAAGAATTTAAGCCATAGCTAGCTACTTGATTTAAGAATGAAAGCCATGTTGAGTTGAAATATGTGGGGGTTTGTATTGCAGCTAGCAACACACAAAAATGCACTTGGAGTGGCTGTGGGAGCCATACTGGGGCATTCAATTTGTACATCAATGGCTGTGATTGGTGGAAGCATGTTGGCATCAAAGATATCCCAAGGCACAGTTGCAACAGTTGGAGGCTTGCTCTTCCTTGGCTTCTCCTTGTCTTCCTATTTTTTCCCACCTCTATAAGCTTTAACCCCCAATTGTTCACTTTTTGTATGCCATTTTGTTTTTCTAAATTCTTTCCAACTTTTTTTTTTTTTTCCTTTTTTT

mRNA sequence

TGGTGGATCTCTAGCTTCGAAGAAGGATCTCTCTCTCTCTCTCTCTCTCTCTATCTCTGTATCGCGAATTCAAGTTGTGGTGATGTACAATTGCAGCAAAGCAATGCAGATCTGATCTTCCTTTTCAATTGAGGGATCCCACACTCTCAATTTCTTCTCCGATTCAGATCCCCGTCTACAAACAACTAATTCCATCCACTATCTTCTTAATCCCTTTTTCCTTCAATGGGTTTGCGTTCAAACCCTACTGCTAACCTCTCTTTCTCTCCTTCTTTTCTCCTCCTTCTGCTTCTTCTTTCTCTCTTTGCCTCCCTTCAGGTGTATTCTGCGGAAGTGGAGAAAGATGAGTTGGATGGACCTAAAGATCTCGGTCGACGTAGCAAGATTTCGTGGAGCAACAGTGACACAGTTGCTGCAAAAAAGGATGGTGTTGACTCAGAAGATCTTAATCTTGATATGGACTCCATTGGTCTTGGAGTTTTTGACGCATTTTTTGCGAGTTTGTCCATGATAATTGTCAGTGAGATTGGAGATGAGACATTTATAATCGCTGCACTTATGGCTATGCGCCACCCGAAGTCCATTGTTTTATCTGGAGCGCTCGCTGCCCTGATTGTAATGACAGTACTCTCAACTGGTTTAGGTAGAATAGTTCCGAATTTGATATCAAGGAAACATACCAATAATGCTGCTACAGTGTTGTCAGCCTACGTCCTAATATTGTTTTCTGCAGTTCTGTACGCATTTTTTGGATTGCGGTTACTTTACATTGCTTGGAGATCCAAATCAGATTCAAAATCCTCAACGAAAAAGGAAATGGAAGAAGTAGAGGAGAAGCTTGAGGCTGGACAATCCAAGACGACCTTCCGACGCTTCTTTTTGCGATTTTGCACACCCATATTCTTGGAGTCATTTATTTTGACATTTCTTGCTGAATGGGGGGATCGGAGTCAGATAGCAACAATTGCTCTAGCAACACACAAAAATGCACTTGGAGTGGCTGTGGGAGCCATACTGGGGCATTCAATTTGTACATCAATGGCTGTGATTGGTGGAAGCATGTTGGCATCAAAGATATCCCAAGGCACAGTTGCAACAGTTGGAGGCTTGCTCTTCCTTGGCTTCTCCTTGTCTTCCTATTTTTTCCCACCTCTATAAGCTTTAACCCCCAATTGTTCACTTTTTGTATGCCATTTTGTTTTTCTAAATTCTTTCCAACTTTTTTTTTTTTTTCCTTTTTTT

Coding sequence (CDS)

ATGGGTTTGCGTTCAAACCCTACTGCTAACCTCTCTTTCTCTCCTTCTTTTCTCCTCCTTCTGCTTCTTCTTTCTCTCTTTGCCTCCCTTCAGGTGTATTCTGCGGAAGTGGAGAAAGATGAGTTGGATGGACCTAAAGATCTCGGTCGACGTAGCAAGATTTCGTGGAGCAACAGTGACACAGTTGCTGCAAAAAAGGATGGTGTTGACTCAGAAGATCTTAATCTTGATATGGACTCCATTGGTCTTGGAGTTTTTGACGCATTTTTTGCGAGTTTGTCCATGATAATTGTCAGTGAGATTGGAGATGAGACATTTATAATCGCTGCACTTATGGCTATGCGCCACCCGAAGTCCATTGTTTTATCTGGAGCGCTCGCTGCCCTGATTGTAATGACAGTACTCTCAACTGGTTTAGGTAGAATAGTTCCGAATTTGATATCAAGGAAACATACCAATAATGCTGCTACAGTGTTGTCAGCCTACGTCCTAATATTGTTTTCTGCAGTTCTGTACGCATTTTTTGGATTGCGGTTACTTTACATTGCTTGGAGATCCAAATCAGATTCAAAATCCTCAACGAAAAAGGAAATGGAAGAAGTAGAGGAGAAGCTTGAGGCTGGACAATCCAAGACGACCTTCCGACGCTTCTTTTTGCGATTTTGCACACCCATATTCTTGGAGTCATTTATTTTGACATTTCTTGCTGAATGGGGGGATCGGAGTCAGATAGCAACAATTGCTCTAGCAACACACAAAAATGCACTTGGAGTGGCTGTGGGAGCCATACTGGGGCATTCAATTTGTACATCAATGGCTGTGATTGGTGGAAGCATGTTGGCATCAAAGATATCCCAAGGCACAGTTGCAACAGTTGGAGGCTTGCTCTTCCTTGGCTTCTCCTTGTCTTCCTATTTTTTCCCACCTCTATAA

Protein sequence

MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSDTVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLLYIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL

Homology

[Close]

BLAST of ClCG11G010760 vs. NCBI nr
Match: XP_038889550.1 (GDT1-like protein 4 [Benincasa hispida])

HSP 1 Score: 528.1 bits (1359), Expect = 5.1e-146
Identity = 293/310 (94.52%), Postives = 295/310 (95.16%), Query Frame = 0


Query: 1   MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSD 60
           MGLRSNPTANLSFS SFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSD
Sbjct: 1   MGLRSNPTANLSFSSSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSD 60

Query: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           T+AAKKDGVD EDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDGVDPEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLL 180
           VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAAT            VLYAFFGLRLL
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAAT------------VLYAFFGLRLL 180

Query: 181 YIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240
           YIAWRSKS+ KSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD
Sbjct: 181 YIAWRSKSE-KSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240

Query: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 300
           RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF
Sbjct: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 297

Query: 301 SLSSYFFPPL 311
           SLSSYFFPPL
Sbjct: 301 SLSSYFFPPL 297

[Close]

BLAST of ClCG11G010760 vs. NCBI nr
Match: XP_008441858.1 (PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 [Cucumis melo])

HSP 1 Score: 525.8 bits (1353), Expect = 2.5e-145
Identity = 291/310 (93.87%), Postives = 293/310 (94.52%), Query Frame = 0


Query: 1   MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSD 60
           MGLRSNPT  LSFSPSFLL LLLLSLFAS+QVYSAE EKDELDGPKDLGRRSKISWSNSD
Sbjct: 1   MGLRSNPTTTLSFSPSFLLFLLLLSLFASIQVYSAEAEKDELDGPKDLGRRSKISWSNSD 60

Query: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLL 180
           VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAAT            VLYAFFGLRLL
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAAT------------VLYAFFGLRLL 180

Query: 181 YIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240
           YIAWRSKS+ KSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD
Sbjct: 181 YIAWRSKSE-KSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240

Query: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 300
           RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF
Sbjct: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 297

Query: 301 SLSSYFFPPL 311
           SLSSYFFPPL
Sbjct: 301 SLSSYFFPPL 297

[Close]

BLAST of ClCG11G010760 vs. NCBI nr
Match: KAA0049878.1 (putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK07616.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 525.8 bits (1353), Expect = 2.5e-145
Identity = 291/310 (93.87%), Postives = 293/310 (94.52%), Query Frame = 0


Query: 1   MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSD 60
           MGLRSNPT  LSFSPSFLL LLLLSLFAS+QVYSAE EKDELDGPKDLGRRSKISWSNSD
Sbjct: 1   MGLRSNPTTTLSFSPSFLLFLLLLSLFASIQVYSAEAEKDELDGPKDLGRRSKISWSNSD 60

Query: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLL 180
           VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAAT            VLYAFFGLRLL
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAAT------------VLYAFFGLRLL 180

Query: 181 YIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240
           YIAWRSKS+ KSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD
Sbjct: 181 YIAWRSKSE-KSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240

Query: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 300
           RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF
Sbjct: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 297

Query: 301 SLSSYFFPPL 311
           SLSSYFFPPL
Sbjct: 301 SLSSYFFPPL 297

[Close]

BLAST of ClCG11G010760 vs. NCBI nr
Match: XP_022997610.1 (putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita maxima])

HSP 1 Score: 521.2 bits (1341), Expect = 6.3e-144
Identity = 283/310 (91.29%), Postives = 294/310 (94.84%), Query Frame = 0


Query: 1   MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSD 60
           MGLRSNPT NLSFSPS +LLLLL+SLFAS+QVYSAEVEK+ELDGPKDLGRRSKISW+N D
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVYSAEVEKEELDGPKDLGRRSKISWNNVD 60

Query: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           T+AAKKD VDSEDLNLD+DS+GLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLL 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAAT            VLYAFFGLRLL
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAAT------------VLYAFFGLRLL 180

Query: 181 YIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240
           YIAWRSK+DSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD
Sbjct: 181 YIAWRSKADSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240

Query: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 300
           RSQIATIALATHKNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGF
Sbjct: 241 RSQIATIALATHKNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGF 298

Query: 301 SLSSYFFPPL 311
           SLSSYFFPPL
Sbjct: 301 SLSSYFFPPL 298

[Close]

BLAST of ClCG11G010760 vs. NCBI nr
Match: XP_023545881.1 (putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 518.5 bits (1334), Expect = 4.1e-143
Identity = 281/310 (90.65%), Postives = 294/310 (94.84%), Query Frame = 0


Query: 1   MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSD 60
           MGLRSNPT NLSFSPS +LLLLL+SLFAS+QV+SAEVEK+ELDGPKDLGRRSKISW+N D
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDGPKDLGRRSKISWNNID 60

Query: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           T+AA+KD VDSEDLNLD+DS+GLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAARKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLL 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAAT            VLYAFFGLRLL
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAAT------------VLYAFFGLRLL 180

Query: 181 YIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240
           YIAWRSK+DSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD
Sbjct: 181 YIAWRSKADSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240

Query: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 300
           RSQIATIALATHKNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGF
Sbjct: 241 RSQIATIALATHKNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGF 298

Query: 301 SLSSYFFPPL 311
           SLSSYFFPPL
Sbjct: 301 SLSSYFFPPL 298

[Close]

BLAST of ClCG11G010760 vs. ExPASy Swiss-Prot
Match: Q6ZIB9 (GDT1-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0528500 PE=2 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.2e-97
Identity = 211/296 (71.28%), Postives = 236/296 (79.73%), Query Frame = 0


Query: 20  LLLLLSLFASLQVYSAEVEKDELDGPKD-----LGRRSKISWSNSDTVAAKKDGVDSEDL 79
           LLLLL L A+    +A  ++++  G  D     L RR+K+        A   DG  +   
Sbjct: 10  LLLLLLLVAAAAAAAAAGDQEDPRGGGDNGTARLDRRTKMFLH----AARASDGGAT--- 69

Query: 80  NLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALAALIVMTV 139
              M+  GLG+FDAFFASLSMI+VSEIGDETFIIAALMAMRHPKS VLSGAL+AL+VMT+
Sbjct: 70  --GMEKAGLGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMTI 129

Query: 140 LSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLLYIAWRSKSDSKSST 199
           LSTGLGRIVPNLISRKHTN+AAT            VLYAFFGLRLLYIAWR  SDSK+S 
Sbjct: 130 LSTGLGRIVPNLISRKHTNSAAT------------VLYAFFGLRLLYIAWR--SDSKASQ 189

Query: 200 KKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKN 259
           KKE+EEVEEKLEAGQ K+TFRR F RFCTPIFLESF+LTFLAEWGDRSQIATIALATHKN
Sbjct: 190 KKEIEEVEEKLEAGQGKSTFRRIFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKN 249

Query: 260 ALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 311
           A+GVAVGA LGH+ICTS AV+GGSMLASKISQGTVAT+GGLLFLGFSLSSYF+PPL
Sbjct: 250 AVGVAVGATLGHTICTSFAVVGGSMLASKISQGTVATIGGLLFLGFSLSSYFYPPL 282

[Close]

BLAST of ClCG11G010760 vs. ExPASy Swiss-Prot
Match: A2YXC7 (GDT1-like protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29993 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.6e-97
Identity = 211/295 (71.53%), Postives = 235/295 (79.66%), Query Frame = 0


Query: 20  LLLLLSLFASLQVYSAEVEKDEL----DGPKDLGRRSKISWSNSDTVAAKKDGVDSEDLN 79
           LLLLL L A+    +A  ++D      +G   L RR+K+        A   DG  +    
Sbjct: 10  LLLLLLLVAAAAAAAAGDQEDPRGGGDNGTARLDRRTKMFLH----AARASDGGAT---- 69

Query: 80  LDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALAALIVMTVL 139
             M+  GLG+FDAFFASLSMI+VSEIGDETFIIAALMAMRHPKS VLSGAL+AL+VMT+L
Sbjct: 70  -GMEKAGLGLFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSTVLSGALSALVVMTIL 129

Query: 140 STGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLLYIAWRSKSDSKSSTK 199
           STGLGRIVPNLISRKHTN+AAT            VLYAFFGLRLLYIAWR  SDSK+S K
Sbjct: 130 STGLGRIVPNLISRKHTNSAAT------------VLYAFFGLRLLYIAWR--SDSKASQK 189

Query: 200 KEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNA 259
           KE+EEVEEKLEAGQ K+TFRR F RFCTPIFLESF+LTFLAEWGDRSQIATIALATHKNA
Sbjct: 190 KEIEEVEEKLEAGQGKSTFRRIFSRFCTPIFLESFVLTFLAEWGDRSQIATIALATHKNA 249

Query: 260 LGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 311
           +GVAVGA LGH+ICTS AV+GGSMLASKISQGTVAT+GGLLFLGFSLSSYF+PPL
Sbjct: 250 VGVAVGATLGHTICTSFAVVGGSMLASKISQGTVATIGGLLFLGFSLSSYFYPPL 281

[Close]

BLAST of ClCG11G010760 vs. ExPASy Swiss-Prot
Match: Q93Y38 (GDT1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g36290 PE=2 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 3.5e-97
Identity = 209/316 (66.14%), Postives = 242/316 (76.58%), Query Frame = 0


Query: 1   MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELD----GPKDLGRRSKISW 60
           MGL SNPT         +L+  +  L +S+    + VE +E        K+LGRR  +  
Sbjct: 1   MGLISNPT-------RLILVATIFFLVSSISGQDSVVENNERQESEGSGKELGRRGMVGT 60

Query: 61  S--NSDTVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAM 120
                DTV    D + +  LNLD+D+    VFDA F+S SMI+V+EIGDETFIIAALMAM
Sbjct: 61  ERIGVDTVV---DNIGALGLNLDLDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAM 120

Query: 121 RHPKSIVLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAF 180
           RHPK+ VLSGAL+AL VMT+LSTGLGRIVPNLISRKHTN+AAT            VLYAF
Sbjct: 121 RHPKATVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAAT------------VLYAF 180

Query: 181 FGLRLLYIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTF 240
           FGLRLLYIAWRS +DSKS+ KKEMEEVEEKLE+GQ KT FRR F RFCTPIFLESFILTF
Sbjct: 181 FGLRLLYIAWRS-TDSKSNQKKEMEEVEEKLESGQGKTPFRRLFSRFCTPIFLESFILTF 240

Query: 241 LAEWGDRSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGG 300
           LAEWGDRSQIATIALATHKNA+GVA+GA +GH++CTS+AV+GGSMLAS+ISQ TVATVGG
Sbjct: 241 LAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGG 293

Query: 301 LLFLGFSLSSYFFPPL 311
           LLFLGFS+SSYF+PPL
Sbjct: 301 LLFLGFSVSSYFYPPL 293

[Close]

BLAST of ClCG11G010760 vs. ExPASy Swiss-Prot
Match: A2ZE50 (GDT1-like protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_36063 PE=3 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 8.6e-96
Identity = 207/297 (69.70%), Postives = 234/297 (78.79%), Query Frame = 0


Query: 14  SPSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSDTVAAKKDGVDSED 73
           +P  L+LL+LL+  A++ V  AE  +        LGRR     +       KK+ V   D
Sbjct: 4   NPRLLILLVLLAFSATVAV--AEDGESTGGSKVSLGRR-----AGGFLHGLKKEAVVEGD 63

Query: 74  LNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALAALIVMT 133
             + +D +G G+FDA FASLSMI+VSEIGDETFIIAALMAMRHPKSIVLSGAL+AL VMT
Sbjct: 64  HGVALDEVGPGLFDALFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMT 123

Query: 134 VLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLLYIAWRSKSDSKSS 193
           VLSTGLGRIVPNLISRKHTN+AAT            VLY FFGLRLLYIAW  KSD K S
Sbjct: 124 VLSTGLGRIVPNLISRKHTNSAAT------------VLYLFFGLRLLYIAW--KSDPKGS 183

Query: 194 TKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHK 253
            KKEMEEVEEKLE+GQ K+T RRFF RFCTPIFLE+FILTFLAEWGDRSQIATIALATHK
Sbjct: 184 QKKEMEEVEEKLESGQGKSTLRRFFGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHK 243

Query: 254 NALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 311
           NA+GVAVGA LGH++CTS+AVIGGSMLASKISQ TVAT+GG+LFLGFS+SSYF+PPL
Sbjct: 244 NAIGVAVGASLGHTVCTSLAVIGGSMLASKISQRTVATIGGVLFLGFSVSSYFYPPL 279

[Close]

BLAST of ClCG11G010760 vs. ExPASy Swiss-Prot
Match: Q2R4J1 (GDT1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0472500 PE=2 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 8.6e-96
Identity = 207/297 (69.70%), Postives = 234/297 (78.79%), Query Frame = 0


Query: 14  SPSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSDTVAAKKDGVDSED 73
           +P  L+LL+LL+  A++ V  AE  +        LGRR     +       KK+ V   D
Sbjct: 4   NPRLLILLVLLAFSATVAV--AEDGESTGGSKVSLGRR-----AGGFLHGLKKEAVVEGD 63

Query: 74  LNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALAALIVMT 133
             + +D +G G+FDA FASLSMI+VSEIGDETFIIAALMAMRHPKSIVLSGAL+AL VMT
Sbjct: 64  HGVALDEVGPGLFDALFASLSMILVSEIGDETFIIAALMAMRHPKSIVLSGALSALYVMT 123

Query: 134 VLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLLYIAWRSKSDSKSS 193
           VLSTGLGRIVPNLISRKHTN+AAT            VLY FFGLRLLYIAW  KSD K S
Sbjct: 124 VLSTGLGRIVPNLISRKHTNSAAT------------VLYLFFGLRLLYIAW--KSDPKGS 183

Query: 194 TKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHK 253
            KKEMEEVEEKLE+GQ K+T RRFF RFCTPIFLE+FILTFLAEWGDRSQIATIALATHK
Sbjct: 184 QKKEMEEVEEKLESGQGKSTLRRFFGRFCTPIFLEAFILTFLAEWGDRSQIATIALATHK 243

Query: 254 NALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFPPL 311
           NA+GVAVGA LGH++CTS+AVIGGSMLASKISQ TVAT+GG+LFLGFS+SSYF+PPL
Sbjct: 244 NAIGVAVGASLGHTVCTSLAVIGGSMLASKISQRTVATIGGVLFLGFSVSSYFYPPL 279

[Close]

BLAST of ClCG11G010760 vs. ExPASy TrEMBL
Match: A0A5A7U3P6 (GDT1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00130 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.2e-145
Identity = 291/310 (93.87%), Postives = 293/310 (94.52%), Query Frame = 0


Query: 1   MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSD 60
           MGLRSNPT  LSFSPSFLL LLLLSLFAS+QVYSAE EKDELDGPKDLGRRSKISWSNSD
Sbjct: 1   MGLRSNPTTTLSFSPSFLLFLLLLSLFASIQVYSAEAEKDELDGPKDLGRRSKISWSNSD 60

Query: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLL 180
           VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAAT            VLYAFFGLRLL
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAAT------------VLYAFFGLRLL 180

Query: 181 YIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240
           YIAWRSKS+ KSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD
Sbjct: 181 YIAWRSKSE-KSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240

Query: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 300
           RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF
Sbjct: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 297

Query: 301 SLSSYFFPPL 311
           SLSSYFFPPL
Sbjct: 301 SLSSYFFPPL 297

[Close]

BLAST of ClCG11G010760 vs. ExPASy TrEMBL
Match: A0A1S3B4E3 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucumis melo OX=3656 GN=LOC103485889 PE=3 SV=1)

HSP 1 Score: 525.8 bits (1353), Expect = 1.2e-145
Identity = 291/310 (93.87%), Postives = 293/310 (94.52%), Query Frame = 0


Query: 1   MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSD 60
           MGLRSNPT  LSFSPSFLL LLLLSLFAS+QVYSAE EKDELDGPKDLGRRSKISWSNSD
Sbjct: 1   MGLRSNPTTTLSFSPSFLLFLLLLSLFASIQVYSAEAEKDELDGPKDLGRRSKISWSNSD 60

Query: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLL 180
           VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAAT            VLYAFFGLRLL
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAAT------------VLYAFFGLRLL 180

Query: 181 YIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240
           YIAWRSKS+ KSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD
Sbjct: 181 YIAWRSKSE-KSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240

Query: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 300
           RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF
Sbjct: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 297

Query: 301 SLSSYFFPPL 311
           SLSSYFFPPL
Sbjct: 301 SLSSYFFPPL 297

[Close]

BLAST of ClCG11G010760 vs. ExPASy TrEMBL
Match: A0A6J1KA70 (putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita maxima OX=3661 GN=LOC111492492 PE=3 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 3.0e-144
Identity = 283/310 (91.29%), Postives = 294/310 (94.84%), Query Frame = 0


Query: 1   MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSD 60
           MGLRSNPT NLSFSPS +LLLLL+SLFAS+QVYSAEVEK+ELDGPKDLGRRSKISW+N D
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVYSAEVEKEELDGPKDLGRRSKISWNNVD 60

Query: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           T+AAKKD VDSEDLNLD+DS+GLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLL 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAAT            VLYAFFGLRLL
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAAT------------VLYAFFGLRLL 180

Query: 181 YIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240
           YIAWRSK+DSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD
Sbjct: 181 YIAWRSKADSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240

Query: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 300
           RSQIATIALATHKNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGF
Sbjct: 241 RSQIATIALATHKNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGF 298

Query: 301 SLSSYFFPPL 311
           SLSSYFFPPL
Sbjct: 301 SLSSYFFPPL 298

[Close]

BLAST of ClCG11G010760 vs. ExPASy TrEMBL
Match: A0A0A0LMQ4 (GDT1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G074220 PE=3 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 3.4e-143
Identity = 287/310 (92.58%), Postives = 291/310 (93.87%), Query Frame = 0


Query: 1   MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSD 60
           MGLRSNPTA LSFS SFLL LL LSLFAS QVYSAEVEKD+LDGPKDLGRRSK+SWSNSD
Sbjct: 1   MGLRSNPTATLSFSASFLLFLLFLSLFASHQVYSAEVEKDDLDGPKDLGRRSKMSWSNSD 60

Query: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           TVA KKDGVDSEDLNLDMDSIGLGVFDAFFASLSMI+VSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TVATKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMILVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLL 180
           VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAAT            VLYAFFGLRLL
Sbjct: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAAT------------VLYAFFGLRLL 180

Query: 181 YIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240
           YIAWRSKS+ KSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD
Sbjct: 181 YIAWRSKSE-KSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240

Query: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 300
           RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF
Sbjct: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 297

Query: 301 SLSSYFFPPL 311
           SLSSYFFPPL
Sbjct: 301 SLSSYFFPPL 297

[Close]

BLAST of ClCG11G010760 vs. ExPASy TrEMBL
Match: A0A6J1EPP7 (putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita moschata OX=3662 GN=LOC111436248 PE=3 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 9.8e-143
Identity = 281/310 (90.65%), Postives = 293/310 (94.52%), Query Frame = 0


Query: 1   MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELDGPKDLGRRSKISWSNSD 60
           MGLRSNPT NLSFSPS +LLLLL+SLFAS+QV+SAEVEK+ELD PKDLGRRSKISW+N D
Sbjct: 1   MGLRSNPTGNLSFSPSLILLLLLVSLFASVQVFSAEVEKEELDVPKDLGRRSKISWNNVD 60

Query: 61  TVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120
           T+AAKKD VDSEDLNLD+DS+GLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI
Sbjct: 61  TIAAKKDVVDSEDLNLDLDSVGLGVFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSI 120

Query: 121 VLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLL 180
           VLSGAL+ALIVMTVLSTGLGRIVPNLISRKHTNNAAT            VLYAFFGLRLL
Sbjct: 121 VLSGALSALIVMTVLSTGLGRIVPNLISRKHTNNAAT------------VLYAFFGLRLL 180

Query: 181 YIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240
           YIAWRSK+DSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD
Sbjct: 181 YIAWRSKADSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGD 240

Query: 241 RSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGF 300
           RSQIATIALATHKNALGVAVGAILGHS+CTSMAVIGGSMLASKISQGTVATVGGLLFLGF
Sbjct: 241 RSQIATIALATHKNALGVAVGAILGHSVCTSMAVIGGSMLASKISQGTVATVGGLLFLGF 298

Query: 301 SLSSYFFPPL 311
           SLSSYFFPPL
Sbjct: 301 SLSSYFFPPL 298

[Close]

BLAST of ClCG11G010760 vs. TAIR 10
Match: AT5G36290.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 356.3 bits (913), Expect = 2.5e-98
Identity = 209/316 (66.14%), Postives = 242/316 (76.58%), Query Frame = 0


Query: 1   MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELD----GPKDLGRRSKISW 60
           MGL SNPT         +L+  +  L +S+    + VE +E        K+LGRR  +  
Sbjct: 1   MGLISNPT-------RLILVATIFFLVSSISGQDSVVENNERQESEGSGKELGRRGMVGT 60

Query: 61  S--NSDTVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAM 120
                DTV    D + +  LNLD+D+    VFDA F+S SMI+V+EIGDETFIIAALMAM
Sbjct: 61  ERIGVDTVV---DNIGALGLNLDLDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAM 120

Query: 121 RHPKSIVLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAF 180
           RHPK+ VLSGAL+AL VMT+LSTGLGRIVPNLISRKHTN+AAT            VLYAF
Sbjct: 121 RHPKATVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAAT------------VLYAF 180

Query: 181 FGLRLLYIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTF 240
           FGLRLLYIAWRS +DSKS+ KKEMEEVEEKLE+GQ KT FRR F RFCTPIFLESFILTF
Sbjct: 181 FGLRLLYIAWRS-TDSKSNQKKEMEEVEEKLESGQGKTPFRRLFSRFCTPIFLESFILTF 240

Query: 241 LAEWGDRSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGG 300
           LAEWGDRSQIATIALATHKNA+GVA+GA +GH++CTS+AV+GGSMLAS+ISQ TVATVGG
Sbjct: 241 LAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGG 293

Query: 301 LLFLGFSLSSYFFPPL 311
           LLFLGFS+SSYF+PPL
Sbjct: 301 LLFLGFSVSSYFYPPL 293

[Close]

BLAST of ClCG11G010760 vs. TAIR 10
Match: AT5G36290.2 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 356.3 bits (913), Expect = 2.5e-98
Identity = 209/316 (66.14%), Postives = 242/316 (76.58%), Query Frame = 0


Query: 1   MGLRSNPTANLSFSPSFLLLLLLLSLFASLQVYSAEVEKDELD----GPKDLGRRSKISW 60
           MGL SNPT         +L+  +  L +S+    + VE +E        K+LGRR  +  
Sbjct: 1   MGLISNPT-------RLILVATIFFLVSSISGQDSVVENNERQESEGSGKELGRRGMVGT 60

Query: 61  S--NSDTVAAKKDGVDSEDLNLDMDSIGLGVFDAFFASLSMIIVSEIGDETFIIAALMAM 120
                DTV    D + +  LNLD+D+    VFDA F+S SMI+V+EIGDETFIIAALMAM
Sbjct: 61  ERIGVDTVV---DNIGALGLNLDLDATAPSVFDALFSSFSMILVTEIGDETFIIAALMAM 120

Query: 121 RHPKSIVLSGALAALIVMTVLSTGLGRIVPNLISRKHTNNAATVLSAYVLILFSAVLYAF 180
           RHPK+ VLSGAL+AL VMT+LSTGLGRIVPNLISRKHTN+AAT            VLYAF
Sbjct: 121 RHPKATVLSGALSALFVMTILSTGLGRIVPNLISRKHTNSAAT------------VLYAF 180

Query: 181 FGLRLLYIAWRSKSDSKSSTKKEMEEVEEKLEAGQSKTTFRRFFLRFCTPIFLESFILTF 240
           FGLRLLYIAWRS +DSKS+ KKEMEEVEEKLE+GQ KT FRR F RFCTPIFLESFILTF
Sbjct: 181 FGLRLLYIAWRS-TDSKSNQKKEMEEVEEKLESGQGKTPFRRLFSRFCTPIFLESFILTF 240

Query: 241 LAEWGDRSQIATIALATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGG 300
           LAEWGDRSQIATIALATHKNA+GVA+GA +GH++CTS+AV+GGSMLAS+ISQ TVATVGG
Sbjct: 241 LAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLAVVGGSMLASRISQRTVATVGG 293

Query: 301 LLFLGFSLSSYFFPPL 311
           LLFLGFS+SSYF+PPL
Sbjct: 301 LLFLGFSVSSYFYPPL 293

[Close]

BLAST of ClCG11G010760 vs. TAIR 10
Match: AT1G25520.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 155.2 bits (391), Expect = 8.4e-38
Identity = 100/237 (42.19%), Postives = 140/237 (59.07%), Query Frame = 0


Query: 85  VFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALAALIVMTVLSTGLGRIVP 144
           V   F  SL+M  VSEIGD+TF  AA++AMR+P+ +VL+G L+ALIVMT+LS  LG   P
Sbjct: 4   VLQGFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAP 63

Query: 145 NLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLLYIAWRSKSDSKSSTKKEMEEVEEK 204
           NLISRK T++  T+L              FFG   L+  W    +    + +E+ EVE +
Sbjct: 64  NLISRKWTHHITTLL--------------FFGFG-LWSLWDGFKEGGGGS-EELAEVEAE 123

Query: 205 LEA----------------GQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIA 264
           L+A                 ++K   R F  +F +PIFL++F + F  EWGD+SQ+ATI 
Sbjct: 124 LDADLKANGKSPKDSSKREDENKKQNRAFLTQFFSPIFLKAFSINFFGEWGDKSQLATIG 183

Query: 265 LATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSY 306
           LA  +N  GV +G ++   +CT+ AVIGG  LAS+IS+  VA  GG+LF+ F + SY
Sbjct: 184 LAADENPFGVVLGGVVAQFLCTTAAVIGGKSLASQISERIVALSGGMLFIIFGIQSY 224

[Close]

BLAST of ClCG11G010760 vs. TAIR 10
Match: AT1G68650.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 152.5 bits (384), Expect = 5.5e-37
Identity = 100/239 (41.84%), Postives = 139/239 (58.16%), Query Frame = 0


Query: 85  VFDAFFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALAALIVMTVLSTGLGRIVP 144
           +   F  SL+M  +SEIGD+TF  AA++AMR+P+ +VL+G L+ALIVMT+LS  LG   P
Sbjct: 4   LLQGFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAP 63

Query: 145 NLISRKHTNNAATVLSAYVLILFSAVLYAFFGLRLLYIAWRSKSDSKSSTKKEMEEVEEK 204
           NLISRK T++  T L              FFG   L+  W    +   S  +E+ EVE +
Sbjct: 64  NLISRKWTHHITTFL--------------FFGFG-LWSLWDGFKEGGGS--EELAEVEAE 123

Query: 205 LEAGQSKTT---------------FRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIAL 264
           L++   KT                 R F   F +PIFL++F + F  EWGD+SQ+ATI L
Sbjct: 124 LDSDLKKTNDQSKNSKIEDEQKKQKRPFLTAFFSPIFLKAFSINFFGEWGDKSQLATIGL 183

Query: 265 ATHKNALGVAVGAILGHSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYFFP 309
           A  +N LGV +G I+  ++CT+ AV+GG  LAS+IS+  VA  GG+LF+ F + S   P
Sbjct: 184 AADENPLGVVLGGIVAQTLCTTAAVLGGKSLASQISERIVALSGGMLFIIFGIQSLLTP 225

[Close]

BLAST of ClCG11G010760 vs. TAIR 10
Match: AT4G13590.1 (Uncharacterized protein family (UPF0016) )

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-29
Identity = 88/221 (39.82%), Postives = 134/221 (60.63%), Query Frame = 0


Query: 89  FFASLSMIIVSEIGDETFIIAALMAMRHPKSIVLSGALAALIVMTVLSTGLGRIVPNLIS 148
           F A+ S+I VSEIGD+TF IAAL+AM++ K++VL G++ AL +MT+LS  +G+I  ++ +
Sbjct: 146 FTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSVPA 205

Query: 149 RKHTNNAATVLSAYVLILFSAVLYAFFGLRLLYIAW---RSKSDSKSSTKKEMEEVEEKL 208
           +  T       +A  L++       FFGL+ +  AW     ++ +   T  E+ E  E  
Sbjct: 206 QFQTTLPIGEYAAIALLM-------FFGLKSIKDAWDLPPVEAKNGEETGIELGEYSEAE 265

Query: 209 EAGQSKTTFRRFFLRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNALGVAVGAILG 268
           E  + K + +   L     I  +SF L F AEWGDRS +AT+AL   ++ LGVA GAI G
Sbjct: 266 ELVKEKASKK---LTNPLEILWKSFSLVFFAEWGDRSMLATVALGAAQSPLGVASGAIAG 325

Query: 269 HSICTSMAVIGGSMLASKISQGTVATVGGLLFLGFSLSSYF 307
           H + T +A++GG+ LA+ IS+  V  VGG LFL F+ +++F
Sbjct: 326 HLVATVLAIMGGAFLANYISEKLVGYVGGALFLVFAAATFF 356

The following BLAST results are available for this feature:

BLAST of ClCG11G010760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889550.1	5.1e-146	94.52	GDT1-like protein 4 [Benincasa hispida]	[more]
XP_008441858.1	2.5e-145	93.87	PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing pro...	[more]
KAA0049878.1	2.5e-145	93.87	putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] ...	[more]
XP_022997610.1	6.3e-144	91.29	putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita maxima...	[more]
XP_023545881.1	4.1e-143	90.65	putative pentatricopeptide repeat-containing protein At3g23330 [Cucurbita pepo s...	[more]

BLAST of ClCG11G010760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6ZIB9	1.2e-97	71.28	GDT1-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0528500 PE=...	[more]
A2YXC7	1.6e-97	71.53	GDT1-like protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_29993 PE=3 SV=...	[more]
Q93Y38	3.5e-97	66.14	GDT1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g36290 PE=2 SV=1	[more]
A2ZE50	8.6e-96	69.70	GDT1-like protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_36063 PE=3 SV=...	[more]
Q2R4J1	8.6e-96	69.70	GDT1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0472500 PE=...	[more]

BLAST of ClCG11G010760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U3P6	1.2e-145	93.87	GDT1 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G...	[more]
A0A1S3B4E3	1.2e-145	93.87	LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At3g23...	[more]
A0A6J1KA70	3.0e-144	91.29	putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita maxi...	[more]
A0A0A0LMQ4	3.4e-143	92.58	GDT1 family protein OS=Cucumis sativus OX=3659 GN=Csa_2G074220 PE=3 SV=1	[more]
A0A6J1EPP7	9.8e-143	90.65	putative pentatricopeptide repeat-containing protein At3g23330 OS=Cucurbita mosc...	[more]

BLAST of ClCG11G010760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36290.1	2.5e-98	66.14	Uncharacterized protein family (UPF0016)	[more]
AT5G36290.2	2.5e-98	66.14	Uncharacterized protein family (UPF0016)	[more]
AT1G25520.1	8.4e-38	42.19	Uncharacterized protein family (UPF0016)	[more]
AT1G68650.1	5.5e-37	41.84	Uncharacterized protein family (UPF0016)	[more]
AT4G13590.1	2.5e-29	39.82	Uncharacterized protein family (UPF0016)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 191..211
None	No IPR available	PANTHER	PTHR12608:SF9	GDT1-LIKE PROTEIN 3	coord: 18..308
IPR001727	Gdt1 family	PFAM	PF01169	UPF0016	coord: 91..175 e-value: 4.0E-16 score: 59.1 coord: 228..300 e-value: 2.7E-20 score: 72.4
IPR001727	Gdt1 family	PANTHER	PTHR12608	TRANSMEMBRANE PROTEIN HTP-1 RELATED	coord: 18..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G010760.1	ClCG11G010760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070588	calcium ion transmembrane transport
biological_process	GO:0032468	Golgi calcium ion homeostasis
biological_process	GO:0032472	Golgi calcium ion transport
biological_process	GO:0071421	manganese ion transmembrane transport
biological_process	GO:0051028	mRNA transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0015085	calcium ion transmembrane transporter activity
molecular_function	GO:0005384	manganese ion transmembrane transporter activity
molecular_function	GO:0008270	zinc ion binding