ClCG11G009957 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCACTGTCTATATTCAAGAAGTTGGGTGTAGGGGAAGCACGGCCCACCACAGTCACACTTCAGCTCGCTGACCGCTCCATTAAGCATCCCGAAGGAAAAATTGAGGATGTTCATGTGAAGGTACACAAATTCATCTTCCCACCCGACTTCATAATTCTGGATTATGAAGGTGACAGAGAGGTGCCCATCATCCTGGGAAGACCTCTTTTAGCTACTGATGCGCCCTGATTGACGTCTAGGAAGGGGAATTAACAATTCGTGTGGACGACCAGCAGGTAAAGTTTAATGTTTTTAATGCATTGAAATATCCTGATGATTTTCATTCTTGCCAGATGATCGAAGATATAATTGAAGAAAAGGCAAGCATCATAGATGCACGGGCAGAAGACGAAACAATGCTGGATGACATGGATGAGGGAAGAGAAGCGGAAATAGGTGTTGATGCGCACTTTTAG ATGCCACTGTCTATATTCAAGAAGTTGGGTGTAGGGGAAGCACGGCCCACCACAGTCACACTTCAGCTCGCTGACCGCTCCATTAAGCATCCCGAAGGAAAAATTGAGGATGTTCATGTGAAGGAAGGGGAATTAACAATTCGTGTGGACGACCAGCAGGTAAAGTTTAATGTTTTTAATGCATTGAAATATCCTGATGATTTTCATTCTTGCCAGATGATCGAAGATATAATTGAAGAAAAGGCAAGCATCATAGATGCACGGGCAGAAGACGAAACAATGCTGGATGACATGGATGAGGGAAGAGAAGCGGAAATAGGTGTTGATGCGCACTTTTAG ATGCCACTGTCTATATTCAAGAAGTTGGGTGTAGGGGAAGCACGGCCCACCACAGTCACACTTCAGCTCGCTGACCGCTCCATTAAGCATCCCGAAGGAAAAATTGAGGATGTTCATGTGAAGGAAGGGGAATTAACAATTCGTGTGGACGACCAGCAGGTAAAGTTTAATGTTTTTAATGCATTGAAATATCCTGATGATTTTCATTCTTGCCAGATGATCGAAGATATAATTGAAGAAAAGGCAAGCATCATAGATGCACGGGCAGAAGACGAAACAATGCTGGATGACATGGATGAGGGAAGAGAAGCGGAAATAGGTGTTGATGCGCACTTTTAG MPLSIFKKLGVGEARPTTVTLQLADRSIKHPEGKIEDVHVKEGELTIRVDDQQVKFNVFNALKYPDDFHSCQMIEDIIEEKASIIDARAEDETMLDDMDEGREAEIGVDAHF Homology
BLAST of ClCG11G009957 vs. NCBI nr
Match: XP_038891032.1 (uncharacterized protein LOC120080447 [Benincasa hispida]) HSP 1 Score: 124.8 bits (312), Expect = 4.7e-25 Identity = 70/119 (58.82%), Postives = 85/119 (71.43%), Query Frame = 0
BLAST of ClCG11G009957 vs. NCBI nr
Match: XP_038895928.1 (uncharacterized protein LOC120084099 [Benincasa hispida]) HSP 1 Score: 110.2 bits (274), Expect = 1.2e-20 Identity = 64/132 (48.48%), Postives = 76/132 (57.58%), Query Frame = 0
BLAST of ClCG11G009957 vs. NCBI nr
Match: XP_038899815.1 (uncharacterized protein LOC120087043 [Benincasa hispida]) HSP 1 Score: 109.4 bits (272), Expect = 2.1e-20 Identity = 60/120 (50.00%), Postives = 71/120 (59.17%), Query Frame = 0
BLAST of ClCG11G009957 vs. NCBI nr
Match: XP_038888126.1 (uncharacterized protein LOC120078022 [Benincasa hispida]) HSP 1 Score: 108.2 bits (269), Expect = 4.6e-20 Identity = 58/113 (51.33%), Postives = 81/113 (71.68%), Query Frame = 0
BLAST of ClCG11G009957 vs. NCBI nr
Match: XP_038896647.1 (uncharacterized protein LOC120084908 [Benincasa hispida]) HSP 1 Score: 106.3 bits (264), Expect = 1.7e-19 Identity = 60/117 (51.28%), Postives = 70/117 (59.83%), Query Frame = 0
BLAST of ClCG11G009957 vs. ExPASy TrEMBL
Match: A0A5B6V914 (Uncharacterized protein OS=Gossypium australe OX=47621 GN=EPI10_000823 PE=4 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 4.3e-16 Identity = 49/77 (63.64%), Postives = 57/77 (74.03%), Query Frame = 0
BLAST of ClCG11G009957 vs. ExPASy TrEMBL
Match: A0A6P4N1Y6 (uncharacterized protein LOC108465977 OS=Gossypium arboreum OX=29729 GN=LOC108465977 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 1.3e-15 Identity = 52/104 (50.00%), Postives = 70/104 (67.31%), Query Frame = 0
BLAST of ClCG11G009957 vs. ExPASy TrEMBL
Match: A0A6J1CR66 (uncharacterized protein LOC111013431 OS=Momordica charantia OX=3673 GN=LOC111013431 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15 Identity = 49/118 (41.53%), Postives = 72/118 (61.02%), Query Frame = 0
BLAST of ClCG11G009957 vs. ExPASy TrEMBL
Match: A0A1U8KID3 (uncharacterized protein LOC107917468 OS=Gossypium hirsutum OX=3635 GN=LOC107917468 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.7e-15 Identity = 54/119 (45.38%), Postives = 76/119 (63.87%), Query Frame = 0
BLAST of ClCG11G009957 vs. ExPASy TrEMBL
Match: A0A1U8HW62 (uncharacterized protein LOC107887871 OS=Gossypium hirsutum OX=3635 GN=LOC107887871 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 6.3e-15 Identity = 62/161 (38.51%), Postives = 86/161 (53.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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