ClCG11G008975 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG11G008975
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionCysteine and histidine-rich domain-containing protein
LocationCG_Chr11: 13511801 .. 13522683 (+)
RNA-Seq ExpressionClCG11G008975
SyntenyClCG11G008975
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGACTTCGGCTTTAGTGAGAGTGGCATCTCCTCTAAGCACTACCTTCACTTCTCCTCTGGTAAACGTCATTGTGAGGTTCGGCCAGTCTACTCCCATGTAACCCATCGTTCGAAGCCACAACATACCAAGGATTATATCGATCTGGCCCAAATCTAAGGGTAGAAAGTTCTCTAAAACCGTCACCTGTGGTAGTTCCACGATAACTTCCTTGCAGACTCCCTTCCCTTGCATTGCTGTCCCATCGTCGATGACGATGCCATATTTGGTCGTATTCAACATTGGTATGTCGAGATCCTCTACTAGTTGTCAGTGAATGAAATTGTGGGTAGCCCCACAATCTATCAGAACAATGACTTCACGACCACTGACCTTCCCTTTCAACTTCATCGTTTCGGGTGTTGAAAAACCCAACATCGATTGGAGTCCCAACTCTACTTTTTCCGTCACCTCGTTTGATTCCTCGGCTTCTTCTTCTTCGTCTTCGTCTATTTCTTCAATCACTTGTCCTTCCCCGGCAATGATTAATCGGAGTTCCCATTTTTCTTGTGTTTTACAGCGGTGTTTCAGAGAATATTTCTCGTCGCACTTGAAGCATAGTCCTTTCTCCCTTTTCTCCCGAATTTCGGCGTCTGATAGTTTTCGGGTCACCCAATCCCTTCGCGGAGCTCCAAATTTGTCGGATAATTGTATTCTTGCTATGTTGGGCCGATAATTCGTGTTTTGGCCCTTTTTTTTTTTTTTGTCTCTTAGGCCTTCACGTCTCCCTTCACTGATTTCTTTCCGCCGCTCTTAATCTCCTTCATTGCTTGGATTTCGTCGTTGATGGCTTGCGCTTCATGCATCGCCTCTTCCAAACCGATCGGATTCCTACTTTCGACCTTCGCCTTCAACTTCGGATCCAATCTGTTGATAAAAGTTCCCTTTAAAACCGATTCTGATATCTCTGGTATAGGCGCGAAGAACCTCTCAAATTGCTTTTGGTTTTCGGCGTAGCTTCCATCTTGTTTAATCGCCAGCAACCTTCTCGTCAAGCTTCCCTCTCGTGAACGTCTAAAACCGGACTAACATTCTTCTCTTCAACTCTTCCCATGATCGAATCGGTTTTCAGTTATGCAATACGAATCCACTGAGTCATGATCGAAGCTGATTATCGCTACCTTGATCTTCTCTTCATCCGTCAGCTCGTGTATCTCAAAATAATGCTCGGCGCGATAAACCCATGACTCGAGGGGATCTCCCTTGAAGATCAGCATCTCCAGCCATTTATACTTCCCCTTGTCGCCTCTTCCCTTCGTCTGTGACAATTCTCCTTCCTCCACCTCGGTGCCTATTCCGCATTTCTGTGAGCCTTTCGTAATCAGTGACCCATCCTTGCCTCTACTCAGCGTTATTTCCCACATTTCCCCCATCAGCTGATCGACGTTCTTACACATCACGAAGACTAGTTCCTTCAACCCGGTTATATCCCGTTCGTGCGTCTCCAACTTATCTTCCGCCTCCTTCCTTGCCATTTTCCGTGTCCTCACCAGCTTGAAACCTTGCTCTAATACCAATTTGTTAGATACCTCTCTAACTCAAGAGAATCTATAACAAGAACTCTATTGTTAGACCCCCAATAGTTCACACATATCATAAAAGGGGTAAAAAGGGAAATAAAGAAGAGATCGTGGGAGTAAAATGTGGGGAGGAGGACGTGGCTGACAAAACGGTTAGGAAAGAGGGGACTAGCAGAGAGACAACCCGAGAGGTTTATGAAGGGGTTTGCGATGGGGAGGAGGGCCATGGTTAAGCTGAAGCTGGAATGAAGAAATTGGGGAGGGAGGCACTCTCGAACTTGCCCATCTATCTGTTCTTCCTGTTCTTCTTCTTTTGCTGATATTTCTATTGTTCTTTCTTGCTGCTATGGTATTGGAACTATTGTGATACTCTGCTGTGGATAAATAATATTGTGGCTCTTGGCTGAGTATTTTCTTATCTTTTGGTGTGAGATTGCTGGGAGATTGGGTGAGTTCTTGTTAGATTCTCTTGAGTTAGAGAGGTATCTAACATCATATAACATTCTGGAAATGGAGATGGGGGCCAAAGAAAAACATAAAAGTTTGTAAGAGGATTTCATGAAGGCCAAAATTATGTGATATCTTTTTTTTGTTGGAGGTGTATGTTTATGAAAACAAATCTACTCAATATGAAATTTAATTCCTACATAATCAAAATTTAAATTTGAAAACAATACAAATATTTGTTAGCGTTGAAAGTAAACCTATTAATCAACAATGAATAAAATTTTAAAGATACTACAGCTATATATTTTGTTTTAAATATATATAATGATGAATAGTAATGAATCAAAAATTAAAATTGGGAGATAACAATCATACCTTTTCATTGAAGAAAATAAGTTTACAGGTTAAAACAACTTCATTCTGGCATGATCCAATATTTTCTCTACAAAGAATGGAAACTTCTATAATTATTCCTAAATGATTTCTATCACATTTTAGAAATGGAGATGGAGCAAAGAAAAACGAAAAAGCTTGTTATTTTTTTGAAAAAAGTTTAGTTATTATGTGAAGAGATGTGTTTTATTTGTGGATGATGTGTCAAAGAAGATTCTATGGAAGGGTAAAAAGGTGTGATATCTTTTATTATTATTTTGTTGGAGTTGTACATTGAAGTGAGGGCAAAGGCAAATAGGAATGTGTGTATTGAAAGGTTGGGAGGGTAAAATGGGAATTATGAAAAGATTCAAGGGCAAAAAGGGAATGTAAAACTTCTCCCTTTTTGCCCCTTATAATATAGTATAAATTTTTGTTTCTCTAATCCTTCATTTCTGTAAATCTATCTATTATTTGTATAAGTGAGCATATCTTTTATGTTTAAGACTAAGATGGATGGTATGAAAAGCTAAGGTTGGTCTTCAAAAGCCTTTTAAGTTGATTCAAAGTTGTAGTTTTTGTTGACTTTTTTGAATGAAGATGCAAGACTGGAAAACATACAACAGAAAAGCCAGTTTTGACCAAGCCAACCACTGCTGTAAAGAAGCCAAGTCCAACTCCTGTGTCTTCCATGACAAATAGATTAGGGAAAGAGTCATGTGCTAGGTGCCAGCAAGGTTTCTTTTGTTCAGACCATGGTAAGCGCATCTTTTTACTTTCTGTCAAATTTGTACCTAGGAGTACTGGAATATCTTGATTTTATGTTATGTGCTGATGAGTTTGGTATCCTCATTTGGAAATTCTCCCTAATGTCAAAATTGTAATTTAATCCAAGTTTGAATCTTAGGTACGCAAGTCAAAGGAAATAACAAATCTATTAATGAAGCCTCAATTATACCTGCTGCAAGCAATACTGATTCTCAGGTCCCTCCTGCTCCAGCAAAAAAAATAATCGGTATAAATGAACCTCAGATCTGCAAGAATAAGGGGTGTGGTAAAACTTTCACAGAGATGGAGAATCATGACACTGCCTGCATTTACCATCCTGGACCTGCTATTTTTCATGATCGGTTGAGAGGGGTGAGATACATATATTTACTAAACTTGAAATAACACCATTGTTTGTTGTCATGGTGTTCAATTATAGAGTATCAACCGTGGTTATTGATATATTTTCTATGTTTGATTTTCAGTGGAAATGTTGCAACATTCACGTTAAGGAATTTGATGAGTTCATGGAAATTCATCCCTGCACTCGCGGTTGGCACAATGCTGATCCAGCATAACTAAACAACATAGCTAGATAAGGTATTTAGGTTCTTGTATTTTAAAAGGATGTTTATTATTCATTTATTTAGTTTTCTGAATGAAACTATATGGTATTCCATTACAACTATTGATAGTCAAGATAGGAAAAAAGCCCTAAGGCAATACAATCTCTCCTAAGCCAATTTGAGAGGGCTAAGTATCTTTCTTCTATGTGGACTCCACTACTCAAAACATGGAAGATGAAAAATTGAAAATACTACCTTTAGCATAGTAATACTCTCTCCCCTTGATGAACTGATGACACAAACAACCATCTACCTCAATCCCTTGTCCCACGAGTAAATACCACAAACAACCATCCACGACTTTGAAAAGGCTTATGATCACGTCGATTGGGACTTTCTAGCTAAGGTGATGCAGTAGAAAGGTTTTGGGTATACATGGAAGATGTGGATGTGGAGTTGTGTTCAAAATATGAATTACTCTGTCCTCATCAATGGAGTCCCAAAGGAGTCAATTTAGGCCTCTAGAGGTTTAAGGATAAGGAGATCCTTTATCCCCCTTGTTCTTAATCATTGTGGATTTAATTAAATCGGCTCATTTTAAAAGGGGTGGAGGGAAACATTATTGATCCCTTTAGGGTTGGTACAAATGATGTTGCGTTGCCACATGTTCAGTTTGATGAGGATTCCTTCGTGATCCTTAATCATATGGTGGGGTGTTTTGAGGCCAGGTAGGAGTAAGTGCAATCTTGGGTATCAATTGTGATCAAGAAAAGCTTAGGAGATGGGTGAATGTGATCGGTTGTGAGGTTGGTTCTTTTTCTTCCTCTTATATTAGGCTCCTATTGGGAGGCAATTTGAGGGCCACGTATTTTTGGGACCCTATTTCTTAAAAGATTTGTAGAAGCTTACTTCATTGTCACACGTGCTCTAGTCAACCTTGGGTCCCCCTTTATTGATACCTCAGACTTCCTTGCTTTCACCTTCATAATCATCGCCACTTCACTTCCATAACTCCTAAGGTACATGGTTGCATTTCGAGCATGATGCACACACCACTCAAGTCTAGAGGCAAGAAACTTTCCACAATTATGAATTGTCAACTCCGCTACCTTCAACTCCACCGCTTTATAAATTCCTTCCCTTATACCTTCAAAACTAATAACGGTAAGTTTTTTTGACTCAATTAACATATGAATTTGAAAATACATGTTTGTTCTAAATAACCACGAATCTAGATCTTTTCCATTGAAGACTGACATCTCAACCTTCTTGAACTTGCTCCAACTGTATCCCCCCTCTTTGATCTTGTTTGATGTTTCAGTCAACGATATCTCCTCCACCAATGGCGGTGATTCCATGAAGTCCTCTCACCTCTTTGGTCCCCTACTAGACTCTTCTACCACAGTAGATCCTGAATTTTTTTCCTCTGCAACTCCATCTCTGTAGCCAAAGTGTCACAATTTTTTGAGTTTCTTTCGGTGTTCGTTGCTGCTGCTCTGCTTGCACATTCAACCGTTCTACATTCTTTGAAAATGTTGCAAGCATCTCGTCCATTCATTGATAACTTCTTAACATCTTCCTTAGTACTTCTGATTTCCCTATCTGTTATTTCCATTATTTCCTCCAACTTTTTCTGCACTATTTTCCGGATCTACCCTGGTTGAATGCTCTGGTAAGGTATTCACTTACAATTATTGATATTCAAGACAAGGAAAAAACCCCAAGGCAATATAGTCTCTCCTCAGCCAATTCAAAAGGGCTGAGACTGAGTATCTCTCTACACTCCAATACTCCGCAAGTAAATCTCTATACGCACTCTCATACTCATAACAAACTTGCCTCCTCGGTCATTACCATTTTATCCCTCTTGTATTGATACAATATTGGTGGCCTAACCAGTTGCCTTATTTTAGATGTATGTTTATGGGGATGTGCTACCCTTCAATATTCTGTTTCAGTTAGTTTTTTCTTTCTTAATGGGTGTGATCTCTCACTCTAGAAAAATACATATATTGCATATTTCTCCATTCTTCAACTTCCTTCCAAAATTAATTGAACTATCAGAAGCTCTGCGAAGATATTCTATTTACTTCAGAGAAATATCTCATGATAAGTTATATGGGATAGGGTTTACCAAGAACTTTATTCGACTTATTAGGCAACTTTGTGTTTCTATGAGGAATTTGGAGGGTGCATTGGTTGGTCGTATCTGATTCTGGCATTCATTTCCTTATGACTTATGAACAGGAGAAACAACTCTGGAGATCAAGTTACCTTTCATCAGCATATACACAAAATGAATGAAGCTGCGTGTTGTTTCTGCATTCTGTGTTTGCATGTTTGAACCTTTTGTGGTAACTTCAATGTTATATATTTTTTATCCTGCAATATAACATTATTAATCTTGGGAAACTATGTACTCGACATGTTCTTCCCTATAAATGCTCATCTTGTCTGGTCTAAGTGATTGGCATGTCCCTTATAAAGTGCATTCTCCTTTCATCTGATGGCAAATGAGAGTCCCATTGTTGCCCCAGCAGTTTGATTGAGTGATGTATATATTCGTTTCGTGTTCATCTTTTTCTAACTTCCACAAGTTTCAATTTTATTATATGTTTTTCATCTTTTGATTGGATTTGTGCATTGTGGAACAATGCAAATCTCTTCTGTTGAGAATTCAGCTAATATTAAAATAATTAAATAATAAAATAAAATAAAATGAAGAAATAGAAGTGGAATTTTATGGATAGTTAAAATCAAAATTATCCGACCCTTTCTTTCTTTTCTCACCAATGTGTGCCTTTCCAACGTTCACCAAATGCCATTTTTTATAGACAATTTGGTAGTGGAACTACATGACCAGTAAGGATGTGTCATTATGACACATGGCGTTTAGATATTAAGTATGGTTATATAATGAACATCTATTTTATTATAATATTTATAATACTTTTTAGATGTCCATTATATATATGAAATATCCCTCATTAAAATCTTACTAAAAAAAATCCAATAGAAAAAAATCCTAGTGAAGAAAAAAATACATATTTCATATAATCTAATACTTTTAAAAGAATACAATACATTTGCTCCTCTCATAGAAACATTACTCTCTAATTTGTTGCATTCCAATGTTTTATAACAGTTTTTCAAAGGTTGCGGTAGGTAATGTTTTTGTAAATATGTCAGGTTATCAACAAATTTGTTGTATAGTGATGTCTTCTTTTTCAAGAAAAGTTTTGGTGAAATATGTTTTTTTTTTACTTTGATTTGGGTTATACATGTTATGTTGTTTTTGTATAATGTTTTTGGAGTATTTTTACTAGAAGACGAATGTGTTGAGTCATTGAACTTAGCCATACATATTCCCTGTTAACCTCATAGAGAGGGCAAGAATTCCCTTGAGTCAAGAATTCAGCATGATATGAGGAAGTAGCTGTTATATTTTGTTTCACTAATTGTCATGATATAGCAGTTCCTCTACTTGTTAACAAATAACTTGTTTGAGATCTAGCTAATAAATTTCATTACAATGTCTTTATGTTGAATAACTGTATCTAGTTAAAAAATTTACTGAAAATGCAATATCTGGTATTGTATTGTTAGTAAGATATATAAGTACAATAATTGCTTTGAGATAATCTCAAGGTTGAAATATAACTTTTTTTTATCTTTAGTAAATGAACTTCCATTCAAATGTTTAATGGAAGTGTTTTATTTATATAGAATTTTTTTAAAATTTTTCCGTATAAGTCGACTGATGAACATCCCATCTGCTAAATGCAAAATTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTCTTTTTGAGATTTTTCATTTCAACTTCTTAAGATATTCTATTGCCTTTGGAATCAATTATATTTAGTTTATCAACATATACAGTTATAATAGCAGATTTTGACTGTGATTTATTTATAAAAACAAATGAACATATTGAATTATTTTGATATCTTTCTTTCAACAAATATCCACACAGACAATTATATCACATTCATTCTAATTGTTTTAATTATGATCTCTGTAATTTTATTGAATATAGTTCTCGAGAATTTGATTTATGTATTTCAGGTATTTTAAATCTTTTTGAAATTTTCACATGAATTTAATTATCAAGATATCCATATAAATATACTGTGACTACGTTCATAAGATGCATGTTTAGATTTCATATATAGTTAAACCAATTAAATATCTTAACGTAATTACATCCATCACTAGAGAATATGTCACCTCATAATCAATACCAGGCCTTTGTTATTAACCTTATGCAACTAGTCTTGTTTTATATCTTGTGATCTCATTATTTTCATTTTTTTTTTCTCACAAATACTCATTTGTATCCCACAGGTTTGACATTTTTTTGTGTTTAGACTATTGGTCCAAAAACTTGACATTTTGAAGGTGAGTTTAATTCTTATTTTGGTTTAGGATATTCATTTTTAGATGTAATATCAAGAGCAACATTATACGCAAAAATGTTGTCAATAACTACATTAATTCAGTTTCATATTTTCCCGACATAATTTCTTGAAATCGTATCGTACTTTCTTCACTAATTGTATTATTAGTTATGTTTAGGGTTTCTTCAGGATATTTTAATCCTCAACCAAGTCTTTTTTTAATATTGTTTATTTCTCTTTTTTTGAGAATTTTTATCTTTGAAACCCACTGGTCTACCACACTTCTAGCATGTTCCAGACTCATTAGTGACAATTTGCTGCATTAGGATATCAATTTTTGACGGAACATTTACAACCGTTATATGTGATTTAGTTACTTTTTTTGCATCTATAAATGCATATGGTAATTGATTTGTTATATTTTGCAAATGAATTATTTTTTTAAGTTTCAAGTTTGCATTGATTTGTACGAGGATCTAAATGAGACAATAATAATGCATTTATGCAATTTACTTTTCCAACTTCTTAATTTCTCTCCTAATATTGGAAAATTTGTCTCATTAAAATGATAATCAATAAATGAAAATACATCACCCGTTAGGGGTTTAAAATATTTAATAATTGATGGGAATCATATCCAACATATATTCCTAACCTCTTTTGATGACTTATCTTATTACATTGTGGTGGAGCAATTGGAACATATGTTGCACATCCAAAAATTCGCAGATGGGAAATATTTGGCTCCTTGTCATGCTAATTGTCCGGATGATTATTTATGATAAGCTACTGACCTAATACGTGCAAGTGATACAACATGCAAAATAACATGTCCCATATAGATTTAGGAAGCTCAGCTCCCATAAGTAATGGTCTAGCAATTAATTGCAACCTTTTTATAAATGATTTTATAAATGATTCTGCTAAATTATTTTGTGTATGAACATGAGCTACAAAATGTTTAACATTTATTCCAATTGACATATATTAATTATCAAAAGTTTGAGGTGTAAATTTACTAGCATTATCAAGACGGATGGTCTTAATTGTATAATTAGGAAATTATGCTCTTAACTTAATTATTTGAGTAAGTAATCTTGGAAATGCAAGGTTTCGGTTTGATAGTAAACATACGTGTGGTCATCTACTGGATGCGTCTATTAATACTGTAAAATATTTAAATGATTCACTTGGTGAGTTAATAGGTTCATATATACAAAAAAAAAAATGATGGTGATTCGGTTCCCATTTTAGCTGGTGATGGTCTAATTATTAATTTTCCTTGACAGTGAATCTTTTGGTTCTTCAATAAGTGTATCTGAATTTTCTAAAATTATCCTCATCATTATAGATTTCTGATGACCAATTGGTCATGTCAAATTGTAAATATATCTTGATTCATGAACTTTAGGTTCATTGTTGCATATGTTTCAATGACTTATATATGAGTATAATATAATCTAGAAGATAAAACAGACAACTTTTTCAATATACGTTTTTCATGTGAGACAAGAGATATGATATAAAGATATTTTATCTCATTTTTTACTATCAGTCTCAATAAGATAATCATTGCGAAGTATATCTTTTAAACTTAATAGATTTCTCTTTGATTGACTAGTTAACAACGCATTGTTAATTGTAAATTTTGTTCCTCTAGCCAATATAATATTTGTTTTTTCAAAACCTTCAAGGTTTGCAAAACCTGATATTGTATTGATTTTTGCTTCCAGTATTTTCAATTCGGAAAAATATTTTTTACTTGTAAGTATTGTATGTGTAGTTGCACTTGCTAGACATAGATCTTCATTTTTCATTTTTGAGTCACTCAATATGTGAAAATTGTCTATAATTTTTTATTAAATAAGATAATTACAATAAGATAAACAAAAGTTAAAAAAAATGAAAGATAGATAGAGAAAACAAATAATATTAATTCTAAACATTATCAAAATCAAAGGAAACACTTGCTATGTCATCATTTATGCTAATTTTTTCTTCAGGAGATTCAAAAAAGTACTCCACATCTAAATTTGTCATATTGGATGGGTCAAATATATCGTTATTCTGTATGCAAAATTAGTTCACATTTTTCCCTTTTTCTTTTAGGGAAGTTTGATAGAGATCAATTAGGTGTTTTGATATACAAAAAACACGAGACCAGTGCCAAGTCATCTTGCATCGGAAGCATTTATACTCATCACCTTTGAATTTTTATCTTGTAAGGCTTTTACTTTATGATCATCATTTCGGATGGTTCTTTTGAAATTTGGATAATTAGAACGAGATTCATGGTTATTCATTAATAGCTCATTATTTTGTTCGGCTACAAGAAGACATGAAATTAATTCAAAATATTGTTTAATTAATTTCTCTTGATATTGCTGTTGTAGGAGCATATTCGAAGCATGAAATGAAGAAAATGTCTTCTTCAACATATGCGTATCAGTAATTTTCTCTCCGCATAACAACAATTTTGAACTAATTTTAAATAATGCGGAGTTGTAGTCACTTACTGATTTGAAATCTTAGATCCTTATCTATTCATAACAAGCTTTAGGAAGAATGACTATTTTCTGGTGATCATATCTCTCTTTTAAATTATTCCATAAGATACATGATATTTTTATTGTTAGATATTTCATCTTCAACCTCTTGTGGAGATGATGACGAAGGAAAATCATAGCTTTTGTTTTTTTCCTGAATTGATGTTGTATTTCTCTTTAATTGTTTCTCCTAGGTTCATTGC

mRNA sequence

ATGGTGACTTCGGCTTTAGTGAGAGTGGCATCTCCTCTAAGCACTACCTTCACTTCTCCTCTGGTAAACGTCATTGTGAGGTTCGGCCAGTCTACTCCCATATGCAAGACTGGAAAACATACAACAGAAAAGCCAGTTTTGACCAAGCCAACCACTGCTGTAAAGAAGCCAAGTCCAACTCCTGTGTCTTCCATGACAAATAGATTAGGGAAAGAGTCATGTGCTAGGTGCCAGCAAGGTTTCTTTTGTTCAGACCATGGTACGCAAGTCAAAGGAAATAACAAATCTATTAATGAAGCCTCAATTATACCTGCTGCAAGCAATACTGATTCTCAGGTCCCTCCTGCTCCAGCAAAAAAAATAATCGGTATAAATGAACCTCAGATCTGCAAGAATAAGGGGTGTGGTAAAACTTTCACAGAGATGGAGAATCATGACACTGCCTGCATTTACCATCCTGGACCTGCTATTTTTCATGATCGGTTGAGAGGGTGGAAATGTTGCAACATTCACGTTAAGGAATTTGATGAGTTCATGGAAATTCATCCCTGCACTCGCGGTTGGCACAATGCTGATCCAGCATAACTAAACAACATAGCTAGATAAGGAGCATATTCGAAGCATGAAATGAAGAAAATGTCTTCTTCAACATATGCGTATCAGTAATTTTCTCTCCGCATAACAACAATTTTGAACTAATTTTAAATAATGCGGAGTTGTAGTCACTTACTGATTTGAAATCTTAGATCCTTATCTATTCATAACAAGCTTTAGGAAGAATGACTATTTTCTGGTGATCATATCTCTCTTTTAAATTATTCCATAAGATACATGATATTTTTATTGTTAGATATTTCATCTTCAACCTCTTGTGGAGATGATGACGAAGGAAAATCATAGCTTTTGTTTTTTTCCTGAATTGATGTTGTATTTCTCTTTAATTGTTTCTCCTAGGTTCATTGC

Coding sequence (CDS)

ATGGTGACTTCGGCTTTAGTGAGAGTGGCATCTCCTCTAAGCACTACCTTCACTTCTCCTCTGGTAAACGTCATTGTGAGGTTCGGCCAGTCTACTCCCATATGCAAGACTGGAAAACATACAACAGAAAAGCCAGTTTTGACCAAGCCAACCACTGCTGTAAAGAAGCCAAGTCCAACTCCTGTGTCTTCCATGACAAATAGATTAGGGAAAGAGTCATGTGCTAGGTGCCAGCAAGGTTTCTTTTGTTCAGACCATGGTACGCAAGTCAAAGGAAATAACAAATCTATTAATGAAGCCTCAATTATACCTGCTGCAAGCAATACTGATTCTCAGGTCCCTCCTGCTCCAGCAAAAAAAATAATCGGTATAAATGAACCTCAGATCTGCAAGAATAAGGGGTGTGGTAAAACTTTCACAGAGATGGAGAATCATGACACTGCCTGCATTTACCATCCTGGACCTGCTATTTTTCATGATCGGTTGAGAGGGTGGAAATGTTGCAACATTCACGTTAAGGAATTTGATGAGTTCATGGAAATTCATCCCTGCACTCGCGGTTGGCACAATGCTGATCCAGCATAA

Protein sequence

MVTSALVRVASPLSTTFTSPLVNVIVRFGQSTPICKTGKHTTEKPVLTKPTTAVKKPSPTPVSSMTNRLGKESCARCQQGFFCSDHGTQVKGNNKSINEASIIPAASNTDSQVPPAPAKKIIGINEPQICKNKGCGKTFTEMENHDTACIYHPGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNADPA
Homology
[Close]
BLAST of ClCG11G008975 vs. NCBI nr
Match: XP_038891153.1 (cysteine and histidine-rich domain-containing protein RAR1 isoform X5 [Benincasa hispida])

HSP 1 Score: 324.7 bits (831), Expect = 5.4e-85
Identity = 153/182 (84.07%), Postives = 159/182 (87.36%), Query Frame = 0 

Query: 13  LSTTFTSPLVNVIVRFGQSTPICKTGKHTTEKPVLTKPTTAVKKPSPTPVSSMTNRLGKE 72
           L  T    LVN ++R       CK GKHTTEKPVLTK TTAVKKPSPTPV+SMTN LGKE
Sbjct: 5   LRMTILKVLVNTMIR-------CKIGKHTTEKPVLTKSTTAVKKPSPTPVASMTNTLGKE 64

Query: 73  SCARCQQGFFCSDHGTQVKGNNKSINEASIIPAASNTDSQVPPAPAKKIIGINEPQICKN 132
           SCARCQQGFFCSDHGTQVKGNNKSINE S IPAAS+ +SQ PPAPAKKI+GINEPQICKN
Sbjct: 65  SCARCQQGFFCSDHGTQVKGNNKSINETSSIPAASSIESQAPPAPAKKIVGINEPQICKN 124

Query: 133 KGCGKTFTEMENHDTACIYHPGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNAD 192
           KGCGKTFTEMENHDTAC YHPGPAIFHDRLRGWKCCNIHVKEFDEFMEI PCTRGWHNAD
Sbjct: 125 KGCGKTFTEMENHDTACSYHPGPAIFHDRLRGWKCCNIHVKEFDEFMEIPPCTRGWHNAD 179

Query: 193 PA 195
           PA
Sbjct: 185 PA 179

[Close]
BLAST of ClCG11G008975 vs. NCBI nr
Match: XP_038891152.1 (cysteine and histidine-rich domain-containing protein RAR1 isoform X4 [Benincasa hispida])

HSP 1 Score: 323.6 bits (828), Expect = 1.2e-84
Identity = 148/162 (91.36%), Postives = 152/162 (93.83%), Query Frame = 0 

Query: 33  PICKTGKHTTEKPVLTKPTTAVKKPSPTPVSSMTNRLGKESCARCQQGFFCSDHGTQVKG 92
           P CK GKHTTEKPVLTK TTAVKKPSPTPV+SMTN LGKESCARCQQGFFCSDHGTQVKG
Sbjct: 41  PGCKIGKHTTEKPVLTKSTTAVKKPSPTPVASMTNTLGKESCARCQQGFFCSDHGTQVKG 100

Query: 93  NNKSINEASIIPAASNTDSQVPPAPAKKIIGINEPQICKNKGCGKTFTEMENHDTACIYH 152
           NNKSINE S IPAAS+ +SQ PPAPAKKI+GINEPQICKNKGCGKTFTEMENHDTAC YH
Sbjct: 101 NNKSINETSSIPAASSIESQAPPAPAKKIVGINEPQICKNKGCGKTFTEMENHDTACSYH 160

Query: 153 PGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNADPA 195
           PGPAIFHDRLRGWKCCNIHVKEFDEFMEI PCTRGWHNADPA
Sbjct: 161 PGPAIFHDRLRGWKCCNIHVKEFDEFMEIPPCTRGWHNADPA 202

[Close]
BLAST of ClCG11G008975 vs. NCBI nr
Match: XP_038891148.1 (cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Benincasa hispida] >XP_038891149.1 cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Benincasa hispida])

HSP 1 Score: 323.6 bits (828), Expect = 1.2e-84
Identity = 148/162 (91.36%), Postives = 152/162 (93.83%), Query Frame = 0 

Query: 33  PICKTGKHTTEKPVLTKPTTAVKKPSPTPVSSMTNRLGKESCARCQQGFFCSDHGTQVKG 92
           P CK GKHTTEKPVLTK TTAVKKPSPTPV+SMTN LGKESCARCQQGFFCSDHGTQVKG
Sbjct: 62  PGCKIGKHTTEKPVLTKSTTAVKKPSPTPVASMTNTLGKESCARCQQGFFCSDHGTQVKG 121

Query: 93  NNKSINEASIIPAASNTDSQVPPAPAKKIIGINEPQICKNKGCGKTFTEMENHDTACIYH 152
           NNKSINE S IPAAS+ +SQ PPAPAKKI+GINEPQICKNKGCGKTFTEMENHDTAC YH
Sbjct: 122 NNKSINETSSIPAASSIESQAPPAPAKKIVGINEPQICKNKGCGKTFTEMENHDTACSYH 181

Query: 153 PGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNADPA 195
           PGPAIFHDRLRGWKCCNIHVKEFDEFMEI PCTRGWHNADPA
Sbjct: 182 PGPAIFHDRLRGWKCCNIHVKEFDEFMEIPPCTRGWHNADPA 223

[Close]
BLAST of ClCG11G008975 vs. NCBI nr
Match: XP_038891150.1 (cysteine and histidine-rich domain-containing protein RAR1 isoform X2 [Benincasa hispida])

HSP 1 Score: 322.8 bits (826), Expect = 2.1e-84
Identity = 147/160 (91.88%), Postives = 151/160 (94.38%), Query Frame = 0 

Query: 35  CKTGKHTTEKPVLTKPTTAVKKPSPTPVSSMTNRLGKESCARCQQGFFCSDHGTQVKGNN 94
           CK GKHTTEKPVLTK TTAVKKPSPTPV+SMTN LGKESCARCQQGFFCSDHGTQVKGNN
Sbjct: 61  CKIGKHTTEKPVLTKSTTAVKKPSPTPVASMTNTLGKESCARCQQGFFCSDHGTQVKGNN 120

Query: 95  KSINEASIIPAASNTDSQVPPAPAKKIIGINEPQICKNKGCGKTFTEMENHDTACIYHPG 154
           KSINE S IPAAS+ +SQ PPAPAKKI+GINEPQICKNKGCGKTFTEMENHDTAC YHPG
Sbjct: 121 KSINETSSIPAASSIESQAPPAPAKKIVGINEPQICKNKGCGKTFTEMENHDTACSYHPG 180

Query: 155 PAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNADPA 195
           PAIFHDRLRGWKCCNIHVKEFDEFMEI PCTRGWHNADPA
Sbjct: 181 PAIFHDRLRGWKCCNIHVKEFDEFMEIPPCTRGWHNADPA 220

[Close]
BLAST of ClCG11G008975 vs. NCBI nr
Match: XP_038891151.1 (cysteine and histidine-rich domain-containing protein RAR1 isoform X3 [Benincasa hispida])

HSP 1 Score: 322.8 bits (826), Expect = 2.1e-84
Identity = 147/160 (91.88%), Postives = 151/160 (94.38%), Query Frame = 0 

Query: 35  CKTGKHTTEKPVLTKPTTAVKKPSPTPVSSMTNRLGKESCARCQQGFFCSDHGTQVKGNN 94
           CK GKHTTEKPVLTK TTAVKKPSPTPV+SMTN LGKESCARCQQGFFCSDHGTQVKGNN
Sbjct: 60  CKIGKHTTEKPVLTKSTTAVKKPSPTPVASMTNTLGKESCARCQQGFFCSDHGTQVKGNN 119

Query: 95  KSINEASIIPAASNTDSQVPPAPAKKIIGINEPQICKNKGCGKTFTEMENHDTACIYHPG 154
           KSINE S IPAAS+ +SQ PPAPAKKI+GINEPQICKNKGCGKTFTEMENHDTAC YHPG
Sbjct: 120 KSINETSSIPAASSIESQAPPAPAKKIVGINEPQICKNKGCGKTFTEMENHDTACSYHPG 179

Query: 155 PAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNADPA 195
           PAIFHDRLRGWKCCNIHVKEFDEFMEI PCTRGWHNADPA
Sbjct: 180 PAIFHDRLRGWKCCNIHVKEFDEFMEIPPCTRGWHNADPA 219

[Close]
BLAST of ClCG11G008975 vs. ExPASy Swiss-Prot
Match: Q6EPW7 (Cysteine and histidine-rich domain-containing protein RAR1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAR1 PE=1 SV=2)

HSP 1 Score: 208.8 bits (530), Expect = 5.7e-53
Identity = 100/171 (58.48%), Postives = 121/171 (70.76%), Query Frame = 0 

Query: 33  PICKTGKHTTEKPVL----TKPTTAVKKPSPTPVSSMTNRLGKESCARCQQGFFCSDHGT 92
           P CKTGKHTTEKP+     TKP+ AV      PV +    +G ++C+RC+QGFFCSDHG+
Sbjct: 78  PGCKTGKHTTEKPITKAVPTKPSKAV------PVQTSKQSVGADTCSRCRQGFFCSDHGS 137

Query: 93  QVKGNNKSINEASIIPAASNTDSQVP---PA--PAKKIIGINEPQICKNKGCGKTFTEME 152
           Q K           IP A++  + VP   PA  P KK I +NEP++CKNKGCGKT+ E +
Sbjct: 138 QPKAQ---------IPTATSDTNMVPVEKPAVPPPKKKIDLNEPRVCKNKGCGKTYKEKD 197

Query: 153 NHDTACIYHPGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNADPA 195
           NHD AC YHPGPA+F DR+RGWKCC+IHVKEFDEFMEI PCT+GWHNAD A
Sbjct: 198 NHDEACDYHPGPAVFRDRIRGWKCCDIHVKEFDEFMEIPPCTKGWHNADAA 233

[Close]
BLAST of ClCG11G008975 vs. ExPASy Swiss-Prot
Match: Q9SE33 (Cysteine and histidine-rich domain-containing protein RAR1 OS=Arabidopsis thaliana OX=3702 GN=RAR1 PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 7.4e-53
Identity = 97/164 (59.15%), Postives = 119/164 (72.56%), Query Frame = 0 

Query: 33  PICKTGKHTTEKPVLTKPTTAVKKPSPTPVSSM-TNRLGKESCARCQQGFFCSDHGTQVK 92
           P CKTGKHTTEKPVL K  +  K P   P SS   N   K+SC+RC+QGFFCSDHG+Q K
Sbjct: 64  PGCKTGKHTTEKPVLAK--SVPKHPVAAPTSSPDANAATKDSCSRCRQGFFCSDHGSQPK 123

Query: 93  GNNKSINEASIIPAASNTDSQVPPAP--AKKIIGINEPQICKNKGCGKTFTEMENHDTAC 152
              + I +    P  +  +   P AP   K +I IN+PQ+CKNKGCG+TF E +NH+TAC
Sbjct: 124 ---EQIKQTLNTPGQAEEEKIEPLAPPVQKAVIDINQPQVCKNKGCGQTFKERDNHETAC 183

Query: 153 IYHPGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNADP 194
            +HPGPA+FHDRLRGWKCC++HVKEFDEFMEI PCT+GWH++ P
Sbjct: 184 SHHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTKGWHSSSP 222

[Close]
BLAST of ClCG11G008975 vs. ExPASy Swiss-Prot
Match: A9YUB1 (Cysteine and histidine-rich domain-containing protein 1 OS=Sus scrofa OX=9823 GN=CHORDC1 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.4e-16
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0 

Query: 129 ICKNKGCGKTFTEMENHDTACIYHPGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGW 188
           +C N+GCG+ F    N D AC YHPG  +FHD L+GW CC     +F +F+ I  CT+G 
Sbjct: 4   LCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIAGCTKGR 63

Query: 189 HNAD 193
           HN++
Sbjct: 64  HNSE 67

[Close]
BLAST of ClCG11G008975 vs. ExPASy Swiss-Prot
Match: Q29RL2 (Cysteine and histidine-rich domain-containing protein 1 OS=Bos taurus OX=9913 GN=CHORDC1 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0 

Query: 129 ICKNKGCGKTFTEMENHDTACIYHPGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGW 188
           +C N+GCG+ F    N D AC YHPG  +FHD L+GW CC     +F +F+ I  CT+G 
Sbjct: 4   LCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGR 63

Query: 189 HNAD 193
           HN++
Sbjct: 64  HNSE 67

[Close]
BLAST of ClCG11G008975 vs. ExPASy Swiss-Prot
Match: Q7T3F7 (Cysteine and histidine-rich domain-containing protein 1 OS=Danio rerio OX=7955 GN=chordc1 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-15
Identity = 31/64 (48.44%), Postives = 41/64 (64.06%), Query Frame = 0 

Query: 129 ICKNKGCGKTFTEMENHDTACIYHPGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGW 188
           +C NKGCG+ F   +N D AC YHPG  +FHD L+GW CC     +F +F+ I  CT+G 
Sbjct: 4   MCYNKGCGQRFDLEKNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIAGCTKGP 63

Query: 189 HNAD 193
           HN +
Sbjct: 64  HNQE 67

[Close]
BLAST of ClCG11G008975 vs. ExPASy TrEMBL
Match: A0A6J1H1M2 (cysteine and histidine-rich domain-containing protein RAR1 OS=Cucurbita moschata OX=3662 GN=LOC111459249 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.9e-81
Identity = 139/162 (85.80%), Postives = 150/162 (92.59%), Query Frame = 0 

Query: 33  PICKTGKHTTEKPVLTKPTTAVKKPSPTPVSSMTNRLGKESCARCQQGFFCSDHGTQVKG 92
           P CKTGKHTTEKPVLTKPTT+VKKPSP PVSSMTN LGKESCARC+QGFFCSDHG+QV+G
Sbjct: 62  PGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVQG 121

Query: 93  NNKSINEASIIPAASNTDSQVPPAPAKKIIGINEPQICKNKGCGKTFTEMENHDTACIYH 152
           NNKSIN+AS +P ASN DSQV PAPAKK +GINEPQICKNKGCGKTFTEM+NHDTAC YH
Sbjct: 122 NNKSINQASNLPPASNIDSQVSPAPAKKTVGINEPQICKNKGCGKTFTEMDNHDTACSYH 181

Query: 153 PGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNADPA 195
           PGPA+FHDRLRGWKCC++HVKEFDEFMEI PCT GWHNAD A
Sbjct: 182 PGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHNADSA 223

[Close]
BLAST of ClCG11G008975 vs. ExPASy TrEMBL
Match: A0A6J1K2T7 (cysteine and histidine-rich domain-containing protein RAR1 OS=Cucurbita maxima OX=3661 GN=LOC111491197 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.4e-80
Identity = 137/162 (84.57%), Postives = 147/162 (90.74%), Query Frame = 0 

Query: 33  PICKTGKHTTEKPVLTKPTTAVKKPSPTPVSSMTNRLGKESCARCQQGFFCSDHGTQVKG 92
           P CKTGKHTTEKPVLTKPTT+VKKPSP PVSSMTN LGKESCARC+QGFFCSDHG+QVKG
Sbjct: 62  PGCKTGKHTTEKPVLTKPTTSVKKPSPAPVSSMTNTLGKESCARCRQGFFCSDHGSQVKG 121

Query: 93  NNKSINEASIIPAASNTDSQVPPAPAKKIIGINEPQICKNKGCGKTFTEMENHDTACIYH 152
           NNKSIN+ S +P ASN DSQV PAPAKK +GINEPQICKNKGCGK FTEM+NHDTAC YH
Sbjct: 122 NNKSINQTSNLPPASNIDSQVSPAPAKKTVGINEPQICKNKGCGKAFTEMDNHDTACSYH 181

Query: 153 PGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNADPA 195
           PGPA+FHDRLRGWKCC++HVKEFDEFMEI PCT GWH AD A
Sbjct: 182 PGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTHGWHTADSA 223

[Close]
BLAST of ClCG11G008975 vs. ExPASy TrEMBL
Match: A0A6J1DZH1 (cysteine and histidine-rich domain-containing protein RAR1 OS=Momordica charantia OX=3673 GN=LOC111026036 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 7.4e-80
Identity = 137/162 (84.57%), Postives = 149/162 (91.98%), Query Frame = 0 

Query: 33  PICKTGKHTTEKPVLTKPTTAVKKPSPTPVSSMTNRLGKESCARCQQGFFCSDHGTQVKG 92
           P CKTGKHTTE+PVL+KP+TAVKKPSP PVSS+TN LGKESCARC+QGFFCSDHG+QVKG
Sbjct: 62  PGCKTGKHTTERPVLSKPSTAVKKPSPAPVSSITNTLGKESCARCRQGFFCSDHGSQVKG 121

Query: 93  NNKSINEASIIPAASNTDSQVPPAPAKKIIGINEPQICKNKGCGKTFTEMENHDTACIYH 152
           +NKS NEAS +P  +N DSQ  PAPAKKIIGINEPQICKNKGCGKTFTEMENHDTAC +H
Sbjct: 122 DNKSSNEASTLPDETNADSQAAPAPAKKIIGINEPQICKNKGCGKTFTEMENHDTACNFH 181

Query: 153 PGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNADPA 195
           PGP +FHDRLRGWKCC+IHVKEFDEFMEI PCTRGWHNADPA
Sbjct: 182 PGPPVFHDRLRGWKCCDIHVKEFDEFMEIQPCTRGWHNADPA 223

[Close]
BLAST of ClCG11G008975 vs. ExPASy TrEMBL
Match: A0A1S3B5A5 (LOW QUALITY PROTEIN: cysteine and histidine-rich domain-containing protein RAR1 OS=Cucumis melo OX=3656 GN=LOC103485924 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 9.0e-78
Identity = 139/162 (85.80%), Postives = 146/162 (90.12%), Query Frame = 0 

Query: 33  PICKTGKHTTEKPVLTKPTTAVKKPSPTPVSSMTNRLGKESCARCQQGFFCSDHGTQVKG 92
           P CKTGKHTTEKPVLTKPTTAVKK SP P+SSMTN LGKESCARCQQGFFCSDHGTQ+KG
Sbjct: 74  PGCKTGKHTTEKPVLTKPTTAVKKLSP-PLSSMTNTLGKESCARCQQGFFCSDHGTQIKG 133

Query: 93  NNKSINEASIIPAASNTDSQVPPAPAKKIIGINEPQICKNKGCGKTFTEMENHDTACIYH 152
            NKSINE S IP ASNTD+Q P  P KK IGINEPQICKNKGCGKTFTEMENH+TAC YH
Sbjct: 134 TNKSINETSTIPGASNTDTQAP--PQKKRIGINEPQICKNKGCGKTFTEMENHETACSYH 193

Query: 153 PGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNADPA 195
           PGP +FHDRLRGW+CCNIHVKEFDEFMEI PC+RGWHNADPA
Sbjct: 194 PGPPVFHDRLRGWQCCNIHVKEFDEFMEIPPCSRGWHNADPA 232

[Close]
BLAST of ClCG11G008975 vs. ExPASy TrEMBL
Match: A0A0A0LKX0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G110230 PE=4 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 4.2e-75
Identity = 134/162 (82.72%), Postives = 142/162 (87.65%), Query Frame = 0 

Query: 33  PICKTGKHTTEKPVLTKPTTAVKKPSPTPVSSMTNRLGKESCARCQQGFFCSDHGTQVKG 92
           P CKTGKHTTEKPVLTKPTT VKKPSP   SSMTN LGKE CARCQQGFFCSDHGTQ+KG
Sbjct: 21  PGCKTGKHTTEKPVLTKPTTGVKKPSPP--SSMTNTLGKELCARCQQGFFCSDHGTQIKG 80

Query: 93  NNKSINEASIIPAASNTDSQVPPAPAKKIIGINEPQICKNKGCGKTFTEMENHDTACIYH 152
           NNKSINE S IP ASNTD+Q P    KK IG+NEPQICKNKGCGKTFTEMENHDTAC YH
Sbjct: 81  NNKSINETSTIPGASNTDTQAP--QKKKKIGMNEPQICKNKGCGKTFTEMENHDTACSYH 140

Query: 153 PGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNADPA 195
           PGP +FHDR+RGW+CCNIHVKEFDEFM+I PC+RGWHNA PA
Sbjct: 141 PGPPVFHDRMRGWQCCNIHVKEFDEFMDIAPCSRGWHNAGPA 178

[Close]
BLAST of ClCG11G008975 vs. TAIR 10
Match: AT5G51700.1 (protein binding;zinc ion binding )

HSP 1 Score: 208.4 bits (529), Expect = 5.3e-54
Identity = 97/164 (59.15%), Postives = 119/164 (72.56%), Query Frame = 0 

Query: 33  PICKTGKHTTEKPVLTKPTTAVKKPSPTPVSSM-TNRLGKESCARCQQGFFCSDHGTQVK 92
           P CKTGKHTTEKPVL K  +  K P   P SS   N   K+SC+RC+QGFFCSDHG+Q K
Sbjct: 64  PGCKTGKHTTEKPVLAK--SVPKHPVAAPTSSPDANAATKDSCSRCRQGFFCSDHGSQPK 123

Query: 93  GNNKSINEASIIPAASNTDSQVPPAP--AKKIIGINEPQICKNKGCGKTFTEMENHDTAC 152
              + I +    P  +  +   P AP   K +I IN+PQ+CKNKGCG+TF E +NH+TAC
Sbjct: 124 ---EQIKQTLNTPGQAEEEKIEPLAPPVQKAVIDINQPQVCKNKGCGQTFKERDNHETAC 183

Query: 153 IYHPGPAIFHDRLRGWKCCNIHVKEFDEFMEIHPCTRGWHNADP 194
            +HPGPA+FHDRLRGWKCC++HVKEFDEFMEI PCT+GWH++ P
Sbjct: 184 SHHPGPAVFHDRLRGWKCCDVHVKEFDEFMEIPPCTKGWHSSSP 222

The following BLAST results are available for this feature:
BLAST of ClCG11G008975 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038891153.15.4e-8584.07cysteine and histidine-rich domain-containing protein RAR1 isoform X5 [Benincasa... [more]
XP_038891152.11.2e-8491.36cysteine and histidine-rich domain-containing protein RAR1 isoform X4 [Benincasa... [more]
XP_038891148.11.2e-8491.36cysteine and histidine-rich domain-containing protein RAR1 isoform X1 [Benincasa... [more]
XP_038891150.12.1e-8491.88cysteine and histidine-rich domain-containing protein RAR1 isoform X2 [Benincasa... [more]
XP_038891151.12.1e-8491.88cysteine and histidine-rich domain-containing protein RAR1 isoform X3 [Benincasa... [more]
BLAST of ClCG11G008975 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6EPW75.7e-5358.48Cysteine and histidine-rich domain-containing protein RAR1 OS=Oryza sativa subsp... [more]
Q9SE337.4e-5359.15Cysteine and histidine-rich domain-containing protein RAR1 OS=Arabidopsis thalia... [more]
A9YUB19.4e-1646.88Cysteine and histidine-rich domain-containing protein 1 OS=Sus scrofa OX=9823 GN... [more]
Q29RL21.2e-1546.88Cysteine and histidine-rich domain-containing protein 1 OS=Bos taurus OX=9913 GN... [more]
Q7T3F71.2e-1548.44Cysteine and histidine-rich domain-containing protein 1 OS=Danio rerio OX=7955 G... [more]
BLAST of ClCG11G008975 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H1M23.9e-8185.80cysteine and histidine-rich domain-containing protein RAR1 OS=Cucurbita moschata... [more]
A0A6J1K2T77.4e-8084.57cysteine and histidine-rich domain-containing protein RAR1 OS=Cucurbita maxima O... [more]
A0A6J1DZH17.4e-8084.57cysteine and histidine-rich domain-containing protein RAR1 OS=Momordica charanti... [more]
A0A1S3B5A59.0e-7885.80LOW QUALITY PROTEIN: cysteine and histidine-rich domain-containing protein RAR1 ... [more]
A0A0A0LKX04.2e-7582.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G110230 PE=4 SV=1[more]
BLAST of ClCG11G008975 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G51700.15.3e-5459.15protein binding;zinc ion binding [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007051CHORD domainPFAMPF04968CHORDcoord: 129..189
e-value: 1.7E-23
score: 83.0
IPR007051CHORD domainPROSITEPS51401CHORDcoord: 130..189
score: 30.639261
NoneNo IPR availableGENE3D4.10.1130.20coord: 123..192
e-value: 2.2E-26
score: 93.9
IPR043316Cysteine and histidine-rich domain-containing protein RAR1PANTHERPTHR47895CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1coord: 32..193

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G008975.1ClCG11G008975.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0046872 metal ion binding