ClCG11G008570 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG11G008570
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDUF1985 domain-containing protein
LocationCG_Chr11: 12437495 .. 12439760 (-)
RNA-Seq ExpressionClCG11G008570
SyntenyClCG11G008570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGGTCAATGGCGCCGTTGCGCTGAACGACATTGAATGGTGGAGCCACGACGCTGTGAGATGGCGTCGTGGTGTTGTGCCTGCTAAAATCCTACCCTCGGCGTTGTGTCGCAACGCCACGTCGATGCTGCTACGCTAATCTTGAGTATTGCTTTCGGGAAAAGCATCGTGGTACTGCCGATCTGGCACCGTGGCGTTGCCTTGTTTTGGTAGTTTGGTGATTTTCTTCTCTTTTCCACTTGATTTTGGCTCGATTTAGTTCTTTTGGCTTATTTTCTTTGTAATGACCTGAAAACCACTAATAAACAAGTGAAATCTAATATAAATTCCCTTAATTTAAGGGAATAAAAATCACTTTTGAAGCACTTTTCAATTACTCGATACACTCGTTACACGTTCCTCGACAAAAATTAAAGCACACGAACTCGTTAGTCATGCTCGATACACCCTATATATGCTTATTCGATAGAAGTTAAGTCACACTAACTCCTTAGTCATACTCAATAAAAATTGAACTTTTTGAATTCTGAAGTATACTTAAAACATTAAGCTAAACTGTTTGAATTCACTTCACATATCATTTGCTCAATTCTCTCTCGATTCTCCTACGATTACTATTTCGTTTTTCTTGCTATTGAATTTGTACCTCACCCGATTCTATCTAAAAGGTAATATTTGTTTGTCTGTCAATGAGTTTTATTTCGTTTCTCTGTGAATGAGTTTTATTTTGCATTTGGTTATAGTCCTTCCACTTGTGTCGAGTCTTGTTACTCCACCTCATTTGTTTTTTCATTTGCATTATTTCATTTTTGCACTATCGAGTTCAAATTTTTCATTTGTTTTCGTTTTGGTCCCCATACTTTTTTGCATTTTAGACACTTAGGGTTTAGGGTCTTGATAGGATTAATAAATAAGGTGGAACGAGCATCACAACATTCAAATAGTGTGTCGTTGAGTCGCATGTAGTGAGCAACAAACATCACATAGTGTGCACCGTGCGTCGTACATCGATGATCGAGTAATCGAGTAACATGCATCGAGTATCGAGTAGTGTGCATCGAGTACTGAAAATAATTCTAATTTTCATGGTTTGTTTGTTCTTCTATGTAGTTTGGCTAGACAATTCAAGAGTGCTCCACATGATCGATTTCCAAGCCAAGCTACCAGCTTATCCTCTCACATCGGAACTGCAAATAAGATTGTGAAAAAGAAGCTTATAGCCACATAATTTGCTCTATTAAAAAATACTGATACAAGAGATTTGTGGATATGGACATCATTTTTAACAGCCCATTAGTTGACTACATACTATTAAGGGAGGTGCAAGATGATAAAGATGATGCCATGACGTTCGATTTGAATGGGACGATCATAATGTTCTCCAAAGAAGAGTTCTTATTGGTTTCGGATTGTGGTGATCACCTCATCCAATAGTCGTTAGTAGAGTTTGAGGTGAAGCGACTGGATAACTACACAGCCGGTACTCCAGGAATGATTTCTCGAGGGACATCCACATTGGTGAAGGGCGATATAAGGCCTATGGTGAGCGGCAAGTCTATATTGAAGGTTGAGCCTAAGAATGAGAATGGTGAGGAACGAAGGTGGACCAATATGAAGAGGAAGTCGACACAACCGTACACCCTTCCAGTAGATACAATGAAAGGTTAAAAGAAAGAGGCAACGATACATTCAACTAATAGAACATTCGACAGATAGGACCCTCTCGTCCCTAATTTGGCTAATTGAGTGCCCAAGGATATCATGAATCATTTCATGGTTTAGTTGACCAACGAGGATATGGGTCCTCATTGGTCGGGCACAAACATCCTCTTCAAGAGGGACTGCACACTAAAGCAGTTCTTCCAAGAGCTTACACAATATAATGAATGGGTTGAAAATGACGTAAGTTATCTAATTTTCAATTTTGTATATCTTTACTAATTGTGTAAATTGCAGATTCTTGACTCCATATTCATGTTCCTTCAGAGGAAGTTCATTAGTCAACTGGAGATATGTGCACACAAGTTCACGACTCTGCCACATGGCATATTGGTACATATGCACCCCAGTTAAGCTAACTTTTAAATTAATTCTTGCATGATTAACATTTTATTATTTTGCAGAGTCATTTGAAACTACACGAGGAAGACAGTGTGTTACACGACATACATCACAAAACCAAACAACAAGTTGTACAAGTATGGGAGAAGGAGGACATGTACATCGATTTTGTTCTGGGGTTGGAACCGAAACACCAGCCGTGA

mRNA sequence

ATGCTGGTCAATGGCGCCGTTGCGCTGAACGACATTGAATGGTGGAGCCACGACGCTGTGAGATGGCGTCGTGGTGTTGTGCCTGCTAAAATCCTACCCTCGGCTATTGCTTTCGGGAAAAGCATCGTGGTACTGCCGATCTGGCACCGTGGCGTTGCCTTGTTTTGTGAGCAACAAACATCACATAGTGTGCACCGTGCGTCGTACATCGATGATCGAGTAATCGATTTGGCTAGACAATTCAAGAGTGCTCCACATGATCGATTTCCAAGCCAAGCTACCAGCTTATCCTCTCACATCGGAACTGCAAATAAGATTAGATTTGTGGATATGGACATCATTTTTAACAGCCCATTAGTTGACTACATACTATTAAGGGAGGTGCAAGATGATAAAGATGATGCCATGACGTTCGATTTGAATGGGACGATCATAATGTTCTCCAAAGAAGAGTTCTTATTGTCGTTAGTAGAGTTTGAGGTGAAGCGACTGGATAACTACACAGCCGGTACTCCAGGAATGATTTCTCGAGGGACATCCACATTGGTGAAGGGCGATATAAGGCCTATGGTGAGCGGCAAGTCTATATTGAAGGTTGAGCCTAAGAATGAGAATGGTGAGGAACGAAGGTGGACCAATATGAAGAGGAAGTCGACACAACCGTACACCCTTCCATTGACCAACGAGGATATGGGTCCTCATTGGTCGGGCACAAACATCCTCTTCAAGAGGGACTGCACACTAAAGCAGTTCTTCCAAGAGCTTACACAATATAATGAATGGGTTGAAAATGACATTCTTGACTCCATATTCATGTTCCTTCAGAGGAAGTTCATTAGTCAACTGGAGATATGTGCACACAAGTTCACGACTCTGCCACATGGCATATTGAGTCATTTGAAACTACACGAGGAAGACAGTGTGTTACACGACATACATCACAAAACCAAACAACAAGTTGTACAAGTATGGGAGAAGGAGGACATGTACATCGATTTTGTTCTGGGGTTGGAACCGAAACACCAGCCGTGA

Coding sequence (CDS)

ATGCTGGTCAATGGCGCCGTTGCGCTGAACGACATTGAATGGTGGAGCCACGACGCTGTGAGATGGCGTCGTGGTGTTGTGCCTGCTAAAATCCTACCCTCGGCTATTGCTTTCGGGAAAAGCATCGTGGTACTGCCGATCTGGCACCGTGGCGTTGCCTTGTTTTGTGAGCAACAAACATCACATAGTGTGCACCGTGCGTCGTACATCGATGATCGAGTAATCGATTTGGCTAGACAATTCAAGAGTGCTCCACATGATCGATTTCCAAGCCAAGCTACCAGCTTATCCTCTCACATCGGAACTGCAAATAAGATTAGATTTGTGGATATGGACATCATTTTTAACAGCCCATTAGTTGACTACATACTATTAAGGGAGGTGCAAGATGATAAAGATGATGCCATGACGTTCGATTTGAATGGGACGATCATAATGTTCTCCAAAGAAGAGTTCTTATTGTCGTTAGTAGAGTTTGAGGTGAAGCGACTGGATAACTACACAGCCGGTACTCCAGGAATGATTTCTCGAGGGACATCCACATTGGTGAAGGGCGATATAAGGCCTATGGTGAGCGGCAAGTCTATATTGAAGGTTGAGCCTAAGAATGAGAATGGTGAGGAACGAAGGTGGACCAATATGAAGAGGAAGTCGACACAACCGTACACCCTTCCATTGACCAACGAGGATATGGGTCCTCATTGGTCGGGCACAAACATCCTCTTCAAGAGGGACTGCACACTAAAGCAGTTCTTCCAAGAGCTTACACAATATAATGAATGGGTTGAAAATGACATTCTTGACTCCATATTCATGTTCCTTCAGAGGAAGTTCATTAGTCAACTGGAGATATGTGCACACAAGTTCACGACTCTGCCACATGGCATATTGAGTCATTTGAAACTACACGAGGAAGACAGTGTGTTACACGACATACATCACAAAACCAAACAACAAGTTGTACAAGTATGGGAGAAGGAGGACATGTACATCGATTTTGTTCTGGGGTTGGAACCGAAACACCAGCCGTGA

Protein sequence

MLVNGAVALNDIEWWSHDAVRWRRGVVPAKILPSAIAFGKSIVVLPIWHRGVALFCEQQTSHSVHRASYIDDRVIDLARQFKSAPHDRFPSQATSLSSHIGTANKIRFVDMDIIFNSPLVDYILLREVQDDKDDAMTFDLNGTIIMFSKEEFLLSLVEFEVKRLDNYTAGTPGMISRGTSTLVKGDIRPMVSGKSILKVEPKNENGEERRWTNMKRKSTQPYTLPLTNEDMGPHWSGTNILFKRDCTLKQFFQELTQYNEWVENDILDSIFMFLQRKFISQLEICAHKFTTLPHGILSHLKLHEEDSVLHDIHHKTKQQVVQVWEKEDMYIDFVLGLEPKHQP
Homology
BLAST of ClCG11G008570 vs. NCBI nr
Match: XP_038887207.1 (uncharacterized protein LOC120077396 [Benincasa hispida])

HSP 1 Score: 116.3 bits (290), Expect = 5.2e-22
Identity = 60/96 (62.50%), Postives = 68/96 (70.83%), Query Frame = 0

Query: 78  ARQFKSAPHDRFPSQATSLSSHIGTANKI-------------------RFVDMDIIFNSP 137
           ARQFK  PHDRFP Q TSLSSHIGT NKI                   RF+DMDIIFNSP
Sbjct: 9   ARQFKIPPHDRFPGQTTSLSSHIGTTNKIVKEKLTPTMLALFKKTIFGRFIDMDIIFNSP 68

Query: 138 LVDYILLREVQDDKDDAMTFDLNGTIIMFSKEEFLL 155
           LV YILLREV++ + DAMTFDLNGT++ F+KE+FLL
Sbjct: 69  LVHYILLREVENHRKDAMTFDLNGTVVTFTKEDFLL 104

BLAST of ClCG11G008570 vs. NCBI nr
Match: XP_038876469.1 (uncharacterized protein LOC120068893 [Benincasa hispida])

HSP 1 Score: 115.2 bits (287), Expect = 1.1e-21
Identity = 59/97 (60.82%), Postives = 69/97 (71.13%), Query Frame = 0

Query: 77  LARQFKSAPHDRFPSQATSLSSHIGTANKI-------------------RFVDMDIIFNS 136
           +ARQFK +PHDRFP QAT+LSSHIGT N I                   RFVDMDIIFNS
Sbjct: 1   MARQFKISPHDRFPDQATNLSSHIGTTNNIVKKKLTPTQVAPFKKTVFDRFVDMDIIFNS 60

Query: 137 PLVDYILLREVQDDKDDAMTFDLNGTIIMFSKEEFLL 155
           PL+ YILLREV+D + D+MTFDLNGT++ F KE+FLL
Sbjct: 61  PLIHYILLREVEDYRKDSMTFDLNGTVVTFIKEDFLL 97

BLAST of ClCG11G008570 vs. NCBI nr
Match: XP_038885907.1 (uncharacterized protein LOC120076213 [Benincasa hispida])

HSP 1 Score: 112.5 bits (280), Expect = 7.4e-21
Identity = 59/97 (60.82%), Postives = 68/97 (70.10%), Query Frame = 0

Query: 77  LARQFKSAPHDRFPSQATSLSSHIGTANKI-------------------RFVDMDIIFNS 136
           +ARQFK  PHDRF  QATS+S HIGT NKI                   RFVDMDIIFNS
Sbjct: 1   MARQFKIPPHDRFLGQATSISFHIGTTNKIVKEKLTPTKLALFRKMVFGRFVDMDIIFNS 60

Query: 137 PLVDYILLREVQDDKDDAMTFDLNGTIIMFSKEEFLL 155
           PLV YILLREV+DD+ DAMTF+LNG ++ F+KE+FLL
Sbjct: 61  PLVHYILLREVEDDRKDAMTFNLNGMVVTFTKEDFLL 97

BLAST of ClCG11G008570 vs. NCBI nr
Match: XP_038889082.1 (uncharacterized protein LOC120078991 [Benincasa hispida])

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-19
Identity = 58/101 (57.43%), Postives = 67/101 (66.34%), Query Frame = 0

Query: 73  RVIDLARQFKSAPHDRFPSQATSLSSHIGTANKI-------------------RFVDMDI 132
           R I++ARQFK  PHDRF SQAT  SSH GT NKI                   RFVD+DI
Sbjct: 38  REIEMARQFKIPPHDRFASQATRSSSHNGTTNKIVKEKLTPTQLALFRKIVFGRFVDLDI 97

Query: 133 IFNSPLVDYILLREVQDDKDDAMTFDLNGTIIMFSKEEFLL 155
           IFNSPLV  ILLREV+D + D+M FDLNG I+ F+KE+FLL
Sbjct: 98  IFNSPLVHCILLREVEDHRKDSMAFDLNGIIVTFTKEDFLL 138

BLAST of ClCG11G008570 vs. NCBI nr
Match: XP_038904309.1 (uncharacterized protein LOC120090663 [Benincasa hispida])

HSP 1 Score: 105.9 bits (263), Expect = 7.0e-19
Identity = 57/97 (58.76%), Postives = 65/97 (67.01%), Query Frame = 0

Query: 77  LARQFKSAPHDRFPSQATSLSSHIGTANKI-------------------RFVDMDIIFNS 136
           +ARQFK  P   FP QAT+LSSHI  ANKI                   RF+D DIIFNS
Sbjct: 1   MARQFKIPPQYHFPGQATNLSSHISMANKIVKEKLTPIQLALYKKMVFGRFIDTDIIFNS 60

Query: 137 PLVDYILLREVQDDKDDAMTFDLNGTIIMFSKEEFLL 155
           PLV YILLREV DD+ DAMTF+LNGT++ FSKE+FLL
Sbjct: 61  PLVHYILLREVVDDRKDAMTFNLNGTVVTFSKEDFLL 97

BLAST of ClCG11G008570 vs. ExPASy TrEMBL
Match: A0A1S3ATU8 (uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.9e-18
Identity = 59/116 (50.86%), Postives = 77/116 (66.38%), Query Frame = 0

Query: 58  QQTSHSVHRASYIDDRVIDLARQFKSAPHDRFPSQATSLSSHIGTANKI----------- 117
           + TSH+    +  DDR   + R  K +P++RFP QA+S+SSHIGTANKI           
Sbjct: 68  RSTSHAF--TAEHDDRT-RMTRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLD 127

Query: 118 --------RFVDMDIIFNSPLVDYILLREVQDDKDDAMTFDLNGTIIMFSKEEFLL 155
                   RFVDMD++F+SPLV +ILLREV+D++ DAM+F+LNG I  FSKEEFLL
Sbjct: 128 LFKRTVFGRFVDMDLVFSSPLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLL 180

BLAST of ClCG11G008570 vs. ExPASy TrEMBL
Match: A0A1S3AUB0 (uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482899 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.9e-18
Identity = 59/116 (50.86%), Postives = 77/116 (66.38%), Query Frame = 0

Query: 58  QQTSHSVHRASYIDDRVIDLARQFKSAPHDRFPSQATSLSSHIGTANKI----------- 117
           + TSH+    +  DDR   + R  K +P++RFP QA+S+SSHIGTANKI           
Sbjct: 68  RSTSHAF--TAEHDDR---MTRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLD 127

Query: 118 --------RFVDMDIIFNSPLVDYILLREVQDDKDDAMTFDLNGTIIMFSKEEFLL 155
                   RFVDMD++F+SPLV +ILLREV+D++ DAM+F+LNG I  FSKEEFLL
Sbjct: 128 LFKRTVFGRFVDMDLVFSSPLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLL 178

BLAST of ClCG11G008570 vs. ExPASy TrEMBL
Match: A0A5A7TGU0 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001140 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-17
Identity = 53/97 (54.64%), Postives = 68/97 (70.10%), Query Frame = 0

Query: 77  LARQFKSAPHDRFPSQATSLSSHIGTANKI-------------------RFVDMDIIFNS 136
           + R  K +P++RFP QA+S+SSHIGTANKI                   RFVDMD++F+S
Sbjct: 7   MTRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSS 66

Query: 137 PLVDYILLREVQDDKDDAMTFDLNGTIIMFSKEEFLL 155
           PLV +ILLREV+D++ DAM+F+LNG I  FSKEEFLL
Sbjct: 67  PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLL 103

BLAST of ClCG11G008570 vs. ExPASy TrEMBL
Match: A0A0A0KM59 (DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-17
Identity = 53/97 (54.64%), Postives = 68/97 (70.10%), Query Frame = 0

Query: 77  LARQFKSAPHDRFPSQATSLSSHIGTANKI-------------------RFVDMDIIFNS 136
           + R  K +P++RFP QA+S+SSHIGTANKI                   RFVDMD++F+S
Sbjct: 1   MTRGLKISPNNRFPGQASSMSSHIGTANKIVKEKLTPKQLDLFKRTVFGRFVDMDLVFSS 60

Query: 137 PLVDYILLREVQDDKDDAMTFDLNGTIIMFSKEEFLL 155
           PLV +ILLREV+D++ DAM+F+LNG I  FSKEEFLL
Sbjct: 61  PLVHHILLREVKDERPDAMSFNLNGIIATFSKEEFLL 97

BLAST of ClCG11G008570 vs. ExPASy TrEMBL
Match: A0A6J1DSS5 (uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023969 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.3e-10
Identity = 45/93 (48.39%), Postives = 54/93 (58.06%), Query Frame = 0

Query: 82  KSAPHDRFPSQATSLSSHIGTANKI--------------------RFVDMDIIFNSPLVD 141
           K +  DRFP+Q TSL SH+ T NKI                    RFVD+D++F S LV 
Sbjct: 6   KVSEADRFPAQVTSL-SHLSTTNKIINQKLTPTQLDMFRKRTIFGRFVDLDMMFCSALVH 65

Query: 142 YILLREVQDDKDDAMTFDLNGTIIMFSKEEFLL 155
           Y LLREV D + D M FD+ GTI+ FSK EFLL
Sbjct: 66  YFLLREVVDTRPDVMRFDILGTIVTFSKAEFLL 97

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038887207.15.2e-2262.50uncharacterized protein LOC120077396 [Benincasa hispida][more]
XP_038876469.11.1e-2160.82uncharacterized protein LOC120068893 [Benincasa hispida][more]
XP_038885907.17.4e-2160.82uncharacterized protein LOC120076213 [Benincasa hispida][more]
XP_038889082.14.1e-1957.43uncharacterized protein LOC120078991 [Benincasa hispida][more]
XP_038904309.17.0e-1958.76uncharacterized protein LOC120090663 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3ATU82.9e-1850.86uncharacterized protein LOC103482899 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3AUB02.9e-1850.86uncharacterized protein LOC103482899 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5A7TGU01.1e-1754.64Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G... [more]
A0A0A0KM591.1e-1754.64DUF1985 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G141180 PE=... [more]
A0A6J1DSS58.3e-1048.39uncharacterized protein LOC111023969 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G008570.1ClCG11G008570.1mRNA