Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTTGGGGCGTTTTATCCTCGGTTAGTTCGTGAATTTATTGTTAATTTGCCTAAAATGATGAATGATGCTTCAAAAAGCAGCGAGTCCAGAAAGGTGCATGTTCGAGGACATTGCTTTAATTTTTCTCTTTCGTTGATTAATCAGTTCCTGGAAAGAGATGAAGATCATGTTCAAGAACAACGTCCTTCAATTCCAAAGCTTGTGTCTGTCTAAAATCACTGAGTGTTCGTAAAAATTGGCATGGACATGACCAGCTTCTTGCTTCTGATTTGTGTGTGAAATATGCCATCTTGCATAAGATTGGATTCACAAATTGGTGTCCTTCGATGCATGGGACTGGAATCTCTCCTGCTCTAGCAAGCCTATTATATCATATTGAACGCAAAGAGGAAATAGATGCTATCTATCAGCAACTTCAGTTATCTATATCTAAGACTGCTGCATTTGAGTTG
mRNA sequence
ATGAATGTTGGGGCGTTTTATCCTCGGTTAGTTCGTGAATTTATTGTTAATTTGCCTAAAATGATGAATGATGCTTCAAAAAGCAGCGAGTCCAGAAAGGTGCATGTTCGAGGACATTGCTTTAATTTTTCTCTTTCGTTGATTAATCAGTTCCTGGAAAGAGATGAAGATCATGTTCAAGAACAACCTTGTGTCTGTCTAAAATCACTGAGTGTTCGTAAAAATTGGCATGGACATGACCAGCTTCTTGCTTCTGATTTGTGTGTGAAATATGCCATCTTGCATAAGATTGGATTCACAAATTGGTGTCCTTCGATGCATGGGACTGGAATCTCTCCTGCTCTAGCAAGCCTATTATATCATATTGAACGCAAAGAGGAAATAGATGCTATCTATCAGCAACTTCAGTTATCTATATCTAAGACTGCTGCATTTGAGTTG
Coding sequence (CDS)
ATGAATGTTGGGGCGTTTTATCCTCGGTTAGTTCGTGAATTTATTGTTAATTTGCCTAAAATGATGAATGATGCTTCAAAAAGCAGCGAGTCCAGAAAGGTGCATGTTCGAGGACATTGCTTTAATTTTTCTCTTTCGTTGATTAATCAGTTCCTGGAAAGAGATGAAGATCATGTTCAAGAACAACCTTGTGTCTGTCTAAAATCACTGAGTGTTCGTAAAAATTGGCATGGACATGACCAGCTTCTTGCTTCTGATTTGTGTGTGAAATATGCCATCTTGCATAAGATTGGATTCACAAATTGGTGTCCTTCGATGCATGGGACTGGAATCTCTCCTGCTCTAGCAAGCCTATTATATCATATTGAACGCAAAGAGGAAATAGATGCTATCTATCAGCAACTTCAGTTATCTATATCTAAGACTGCTGCATTTGAGTTG
Protein sequence
MNVGAFYPRLVREFIVNLPKMMNDASKSSESRKVHVRGHCFNFSLSLINQFLERDEDHVQEQPCVCLKSLSVRKNWHGHDQLLASDLCVKYAILHKIGFTNWCPSMHGTGISPALASLLYHIERKEEIDAIYQQLQLSISKTAAFEL
Homology
BLAST of ClCG11G006870 vs. NCBI nr
Match:
XP_038887050.1 (uncharacterized protein LOC120077220 [Benincasa hispida])
HSP 1 Score: 107.8 bits (268), Expect = 7.9e-20
Identity = 61/135 (45.19%), Postives = 77/135 (57.04%), Query Frame = 0
Query: 1 MNVGAFYPRLVREFIVNLPKMMNDASKSSESRKVHVRGHCFNFSLSLINQFLE-RDEDHV 60
+N G +YP+LV EF VNL D S + RKVHV HCF FS LIN+FL + ++V
Sbjct: 77 LNFGPYYPQLVCEFYVNLSHQF-DNEGSLDYRKVHVNEHCFVFSAYLINRFLNCQVPENV 136
Query: 61 QEQ-----PCVCLKSLSVRKNWHGHDQLLASDLCVKYAILHKIGFTNWCPSMHGTGISPA 120
EQ V + V++ W DQL SDL VKY +LHKIG NWCPS H +S
Sbjct: 137 TEQRSFMSDLVFELTRRVKRAWPKKDQLPCSDLSVKYVLLHKIGIENWCPSSHKYSLSTP 196
Query: 121 LASLLYHIERKEEID 130
L +LLY I E+ +
Sbjct: 197 LENLLYQIGTMEKFN 210
BLAST of ClCG11G006870 vs. NCBI nr
Match:
TYK29236.1 (uncharacterized protein E5676_scaffold1228G00270 [Cucumis melo var. makuwa])
HSP 1 Score: 103.6 bits (257), Expect = 1.5e-18
Identity = 62/143 (43.36%), Postives = 79/143 (55.24%), Query Frame = 0
Query: 2 NVGAFYPRLVREFIVNLPKMMNDASKSSESRKVHVRGHCFNFSLSLINQFLERDEDHVQE 61
NVG FYP+L+REFIVNLP ND S S++ VH+RG F S ++IN FL D
Sbjct: 18 NVGPFYPQLIREFIVNLPDEFNDPS-SADYHTVHIRGFKFVISPAVINGFLGNTVDIDCS 77
Query: 62 QPCVCLKSLS------VRKNWHGHDQLLASDLCVKYAILHKIGFTNWCPSMHGTGISPAL 121
C K L+ W + + + L VKYAILHKIG NW PS+H + IS AL
Sbjct: 78 PSCPTTKVLANVLFGGTLSTWLVNG-IPTAALSVKYAILHKIGIANWFPSLHASSISVAL 137
Query: 122 ASLLYHIERKEEIDA---IYQQL 136
+ LY I +++D IY QL
Sbjct: 138 GTFLYQICNSDKVDTGAFIYNQL 158
BLAST of ClCG11G006870 vs. NCBI nr
Match:
TYK28209.1 (uncharacterized protein E5676_scaffold258G00200 [Cucumis melo var. makuwa])
HSP 1 Score: 103.2 bits (256), Expect = 1.9e-18
Identity = 61/143 (42.66%), Postives = 79/143 (55.24%), Query Frame = 0
Query: 2 NVGAFYPRLVREFIVNLPKMMNDASKSSESRKVHVRGHCFNFSLSLINQFLERDEDHVQE 61
NVG YP+L+REFIVNLP ND S S++ + VH+RG F S +IN+FL D
Sbjct: 568 NVGPLYPKLIREFIVNLPDEFNDQS-SADYQTVHIRGFKFVISPGVINEFLRNTVDIDCS 627
Query: 62 QPCVCLKSLS------VRKNWHGHDQLLASDLCVKYAILHKIGFTNWCPSMHGTGISPAL 121
C + L+ W + +LA+ L VKYAILHKIG NW PS H + I AL
Sbjct: 628 LSCPTTEGLANVLSGGTLSTWPVNG-ILAAALSVKYAILHKIGIANWFPSSHVSSIFAAL 687
Query: 122 ASLLYHIERKEEIDA---IYQQL 136
+ LY I +++D IY QL
Sbjct: 688 GTFLYQICNSDKVDTGAFIYNQL 708
BLAST of ClCG11G006870 vs. NCBI nr
Match:
KAA0063842.1 (uncharacterized protein E6C27_scaffold827G00690 [Cucumis melo var. makuwa])
HSP 1 Score: 103.2 bits (256), Expect = 1.9e-18
Identity = 61/143 (42.66%), Postives = 79/143 (55.24%), Query Frame = 0
Query: 2 NVGAFYPRLVREFIVNLPKMMNDASKSSESRKVHVRGHCFNFSLSLINQFLERDEDHVQE 61
NVG YP+L+REFIVNLP ND S S++ + VH+RG F S +IN+FL D
Sbjct: 556 NVGPLYPKLIREFIVNLPDEFNDQS-SADYQTVHIRGFKFVISPGVINEFLRNTVDIDCS 615
Query: 62 QPCVCLKSLS------VRKNWHGHDQLLASDLCVKYAILHKIGFTNWCPSMHGTGISPAL 121
C + L+ W + +LA+ L VKYAILHKIG NW PS H + I AL
Sbjct: 616 LSCPTTEGLANVLSGGTLSTWPVNG-ILAAALSVKYAILHKIGIANWFPSSHVSSIFAAL 675
Query: 122 ASLLYHIERKEEIDA---IYQQL 136
+ LY I +++D IY QL
Sbjct: 676 GTFLYQICNSDKVDTGAFIYNQL 696
BLAST of ClCG11G006870 vs. NCBI nr
Match:
TYK25712.1 (uncharacterized protein E5676_scaffold2736G00070 [Cucumis melo var. makuwa])
HSP 1 Score: 102.4 bits (254), Expect = 3.3e-18
Identity = 62/143 (43.36%), Postives = 81/143 (56.64%), Query Frame = 0
Query: 2 NVGAFYPRLVREFIVNLPKMMNDASKSSESRKVHVRGHCFNFSLSLINQFLERDEDHVQE 61
NVG FYP+L++EFIVNLP ND S S + + VH+RG F S ++IN FL D
Sbjct: 18 NVGPFYPQLIKEFIVNLPDEFNDPS-SDDYQSVHIRGFKFVVSSAVINGFLGNTVDIDCS 77
Query: 62 QPCVCLKSLSVRKN------WHGHDQLLASDLCVKYAILHKIGFTNWCPSMHGTGISPAL 121
C + L+ + W + +LA+ L VKYAILHKIG NW PS H + IS AL
Sbjct: 78 PSCPTTEVLATVLSRGTLFTWPVNG-ILAAALNVKYAILHKIGIANWFPSSHASSISAAL 137
Query: 122 ASLLYHIERKEEIDA---IYQQL 136
+ LY I +++D IY QL
Sbjct: 138 RTFLYQICNDDKVDMGAFIYNQL 158
BLAST of ClCG11G006870 vs. ExPASy TrEMBL
Match:
A0A5D3E001 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00270 PE=4 SV=1)
HSP 1 Score: 103.6 bits (257), Expect = 7.2e-19
Identity = 62/143 (43.36%), Postives = 79/143 (55.24%), Query Frame = 0
Query: 2 NVGAFYPRLVREFIVNLPKMMNDASKSSESRKVHVRGHCFNFSLSLINQFLERDEDHVQE 61
NVG FYP+L+REFIVNLP ND S S++ VH+RG F S ++IN FL D
Sbjct: 18 NVGPFYPQLIREFIVNLPDEFNDPS-SADYHTVHIRGFKFVISPAVINGFLGNTVDIDCS 77
Query: 62 QPCVCLKSLS------VRKNWHGHDQLLASDLCVKYAILHKIGFTNWCPSMHGTGISPAL 121
C K L+ W + + + L VKYAILHKIG NW PS+H + IS AL
Sbjct: 78 PSCPTTKVLANVLFGGTLSTWLVNG-IPTAALSVKYAILHKIGIANWFPSLHASSISVAL 137
Query: 122 ASLLYHIERKEEIDA---IYQQL 136
+ LY I +++D IY QL
Sbjct: 138 GTFLYQICNSDKVDTGAFIYNQL 158
BLAST of ClCG11G006870 vs. ExPASy TrEMBL
Match:
A0A5A7V6D8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00690 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 9.4e-19
Identity = 61/143 (42.66%), Postives = 79/143 (55.24%), Query Frame = 0
Query: 2 NVGAFYPRLVREFIVNLPKMMNDASKSSESRKVHVRGHCFNFSLSLINQFLERDEDHVQE 61
NVG YP+L+REFIVNLP ND S S++ + VH+RG F S +IN+FL D
Sbjct: 556 NVGPLYPKLIREFIVNLPDEFNDQS-SADYQTVHIRGFKFVISPGVINEFLRNTVDIDCS 615
Query: 62 QPCVCLKSLS------VRKNWHGHDQLLASDLCVKYAILHKIGFTNWCPSMHGTGISPAL 121
C + L+ W + +LA+ L VKYAILHKIG NW PS H + I AL
Sbjct: 616 LSCPTTEGLANVLSGGTLSTWPVNG-ILAAALSVKYAILHKIGIANWFPSSHVSSIFAAL 675
Query: 122 ASLLYHIERKEEIDA---IYQQL 136
+ LY I +++D IY QL
Sbjct: 676 GTFLYQICNSDKVDTGAFIYNQL 696
BLAST of ClCG11G006870 vs. ExPASy TrEMBL
Match:
A0A5D3DXX2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold258G00200 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 9.4e-19
Identity = 61/143 (42.66%), Postives = 79/143 (55.24%), Query Frame = 0
Query: 2 NVGAFYPRLVREFIVNLPKMMNDASKSSESRKVHVRGHCFNFSLSLINQFLERDEDHVQE 61
NVG YP+L+REFIVNLP ND S S++ + VH+RG F S +IN+FL D
Sbjct: 568 NVGPLYPKLIREFIVNLPDEFNDQS-SADYQTVHIRGFKFVISPGVINEFLRNTVDIDCS 627
Query: 62 QPCVCLKSLS------VRKNWHGHDQLLASDLCVKYAILHKIGFTNWCPSMHGTGISPAL 121
C + L+ W + +LA+ L VKYAILHKIG NW PS H + I AL
Sbjct: 628 LSCPTTEGLANVLSGGTLSTWPVNG-ILAAALSVKYAILHKIGIANWFPSSHVSSIFAAL 687
Query: 122 ASLLYHIERKEEIDA---IYQQL 136
+ LY I +++D IY QL
Sbjct: 688 GTFLYQICNSDKVDTGAFIYNQL 708
BLAST of ClCG11G006870 vs. ExPASy TrEMBL
Match:
A0A5D3DQA5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2736G00070 PE=4 SV=1)
HSP 1 Score: 102.4 bits (254), Expect = 1.6e-18
Identity = 62/143 (43.36%), Postives = 81/143 (56.64%), Query Frame = 0
Query: 2 NVGAFYPRLVREFIVNLPKMMNDASKSSESRKVHVRGHCFNFSLSLINQFLERDEDHVQE 61
NVG FYP+L++EFIVNLP ND S S + + VH+RG F S ++IN FL D
Sbjct: 18 NVGPFYPQLIKEFIVNLPDEFNDPS-SDDYQSVHIRGFKFVVSSAVINGFLGNTVDIDCS 77
Query: 62 QPCVCLKSLSVRKN------WHGHDQLLASDLCVKYAILHKIGFTNWCPSMHGTGISPAL 121
C + L+ + W + +LA+ L VKYAILHKIG NW PS H + IS AL
Sbjct: 78 PSCPTTEVLATVLSRGTLFTWPVNG-ILAAALNVKYAILHKIGIANWFPSSHASSISAAL 137
Query: 122 ASLLYHIERKEEIDA---IYQQL 136
+ LY I +++D IY QL
Sbjct: 138 RTFLYQICNDDKVDMGAFIYNQL 158
BLAST of ClCG11G006870 vs. ExPASy TrEMBL
Match:
A0A5A7T1J2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00050 PE=4 SV=1)
HSP 1 Score: 102.4 bits (254), Expect = 1.6e-18
Identity = 62/143 (43.36%), Postives = 81/143 (56.64%), Query Frame = 0
Query: 2 NVGAFYPRLVREFIVNLPKMMNDASKSSESRKVHVRGHCFNFSLSLINQFLERDEDHVQE 61
NVG FYP+L++EFIVNLP ND S S + + VH+RG F S ++IN FL D
Sbjct: 18 NVGPFYPQLIKEFIVNLPDEFNDPS-SDDYQSVHIRGFKFVVSSAVINGFLGNTVDIDCS 77
Query: 62 QPCVCLKSLSVRKN------WHGHDQLLASDLCVKYAILHKIGFTNWCPSMHGTGISPAL 121
C + L+ + W + +LA+ L VKYAILHKIG NW PS H + IS AL
Sbjct: 78 PSCPTTEVLATVLSRGTLFTWPVNG-ILAAALNVKYAILHKIGIANWFPSSHASSISAAL 137
Query: 122 ASLLYHIERKEEIDA---IYQQL 136
+ LY I +++D IY QL
Sbjct: 138 RTFLYQICNDDKVDMGAFIYNQL 158
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038887050.1 | 7.9e-20 | 45.19 | uncharacterized protein LOC120077220 [Benincasa hispida] | [more] |
TYK29236.1 | 1.5e-18 | 43.36 | uncharacterized protein E5676_scaffold1228G00270 [Cucumis melo var. makuwa] | [more] |
TYK28209.1 | 1.9e-18 | 42.66 | uncharacterized protein E5676_scaffold258G00200 [Cucumis melo var. makuwa] | [more] |
KAA0063842.1 | 1.9e-18 | 42.66 | uncharacterized protein E6C27_scaffold827G00690 [Cucumis melo var. makuwa] | [more] |
TYK25712.1 | 3.3e-18 | 43.36 | uncharacterized protein E5676_scaffold2736G00070 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3E001 | 7.2e-19 | 43.36 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7V6D8 | 9.4e-19 | 42.66 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3DXX2 | 9.4e-19 | 42.66 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3DQA5 | 1.6e-18 | 43.36 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7T1J2 | 1.6e-18 | 43.36 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |