ClCG11G006590 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCATCGGTTGCGATTTCGTCCTTACATTTTTTTTTTTTTTTTTGTGTTTATTTGTTTTTTAAAGATGAATAATAAGGTGGAAAGTGCTTTGTTTGGGCTTCTTGCGTGTATGTTATGCTGTTTTTGAGAATTCATCGGAAGTAAAAGTATAACGAAGTACTGTTCTTTCGAGGCCACCGATATTTTTCTTTGCTAATTAGTGTGGAGTTTAAACCAGGACATTATTGCTGATTTTGAGATTTTCTTTTCTTGTGTTCTTGATTTTTTCTTTGGCGCCACCTGTAAAACGAACATCCGTGATTGATTGTTGAATATGAGTGCAGTATCTGTGCTACTTAATAGGGAAATAAGTTTTGATACTTCCAGTTGCGTCTTCTGAAGATGCCTTTTGCAATATATTGGCAGTTGGCGTGTTTGTTTGTATTGTTTTTGGCTTTTCAGAGGCCAGGTTCCGACGCCATCTAGTTTTGCTGGGCTGAATTTCTGGTGAGCTTGAAATAGAAAGACCTGGCTAGTTTTTTTTTTTCCCTCCTGGGTTTATAAGGTTAAAAATGCATATTGGTGGGAAGGTAGATTCAATGTTATTATATCATTGAGGGGATCTGGTATTTCAGCACGTGTGCATTGAATCTCAGCTTTTTTGTTGATCAACGATAGTACTCTAATACAGTAATGCAAGTTTTAACTGCAGCTTTTTTGTTGGATTTTATATTTTATATTTATTTCTTGGCTGCAGCCTGCACCTTGAATCCCTGTGTGTTTAAATGTTATTGTGCTCTGGTAACTTTAGTTTTGAAATTTATGGCCTTCTTTAACCCTCTCTTTGTTTTCCAAGCTCCTTTGTCTGCATATTTTATCTTATCCTTTTTTTGGTGGATCAACAGGCGGTAATCAATGAAGAGACTGAGAAAAGAGGCACAGACAATGAAAGTATGAACAAATTTCAGTATCTTCTTCTTAGTAATCTTATTTCATTTTGTGTTCGATAATTAGTCACACCTAAAAAATTATTCTATTTTACTATTTAATTTCACATAAACTCATCTCCAAGGAATGACTTCTTAATTATATGCAGCACCAGAAGCAAGTATGCAGACGTTCCCCCCAACTAATGGAGGGGACAGAGGGAGAGGTTATCAAACTCTTGAAAGTCCAAGTGGTATGCTGATCATGTACTCCCACTAGGCTATAGTCTATTGAATAGTCTGTTATGATAATAGCAATTGGTGAAAATAATGATTAGAGATTATTCGTTTCATTTTCCTTTACTTTTCTGAACTAGGGGTTCTTACTTTACTTTTATAGATCATTTAACAATTTTAATATTACATTTTCCCCATGTGCTTGTGGTTTTCCCCATGTGTTTGTGGTTTTTATTAATATATATATATATATATATCTGTTTTCTTATAATCTAATTAAATTATTTCTTCTACTAGCTAGTTTTGGACATACATGAAATATGGGATTGAGATATGTTTGTTTCAAGTTCAACTAATTAATCATTGACTTTGTGTATGAGATTCTCCTTTGTTGTAACCATCATAAGTTTACTTGTGGCCAATATGGACAATAGGTATAATACAGGACTTAGAGGGAATTAGTTCAATCCATGGTGGCCATGTGCATAGGATTTAATATCCTACAAATTTTCTTGGCACCTCAATAATGTAGGGTAGTTCAAGTGTTCCTGTGAGATTAGTCGAGGTCCACACAAGTTGTGTTGGAAGTCGAAAGAAAAAAAAGGATTTTCCTTTCTTTGTATCTTTTGACTATCAAGGTTGAAAATGTTGTGTATCATGGCTACCAGATGTTTTTACATTGATTTAGTATTGTGGTACAAGGCTCTTGAATCTAACCCAAGCGGTTTGTAGAATTCTTTGATATGGAAGGTTGAAGCCACCTTTCTAGTTTCAAACCCCAAGACACAGAAAAGAGAGCCTGTTTCTGGATATTAGGAAGTAAAACCTTTTTCAAAAAATAGACTGCCACATTATAAGGCTCCCGAAGATCCGATTTCTGTCTTGCATGCATTTTTATGTGGTTGATTCTTTTCTTATGGTGAACCATACAATTGACTCCATTTACTTATGTGCAGATTCTCAGCAGCAACCATCAAATGACTGGAAGGGGGTGTTTAGTGTATCATCTTACACTCAATATTTCAATGTGGATACGGACATTGTCATGAATAGATTGATTAGTTCCTTGTATCCCATGGGTGGAGACTTTTCCAGCAAGATCGATGCAAATCCTGATCTGTGAGTTTTTTTGTTTCCTCTTGTAACCTTAATAATTTTACTCTCTGATGGCTATGGGATTATCTGTGAGCTTTTCAATGCCTACCTTCTGGTGTTTTTTTTTTCTTTTCTAAATTAATGTGCTTCCCTGCCTGATCATCATTCAAGAATTTATGTGGATGTTGATTTTGATCTTGTTTTTGAAACTAAATGGATTATCAAACTCCTTTTGTTGGATTTTGCTATAACTCAGATATGGGCTCGTGTGGATCACCACTACATTGGTATTTGTCCTTGCGGCACTAGGAAACTGTGCGACCTTCCTCATGCAAAGACGAAGTGATCACGGTGCTGCGTGGAGTTTTGATGTCAGCTATATGAATGTGGCTGCTGGGTCTGTCTATGGCTATGCGATTGTGGTGCCCATGGCATTTTACTTTTCACTTCAGTACTTGGGGTCAAATTCTAGCCTCATAAGATTTTGGTGCTTGTGGGGATACTCTCTGTTCATTTTTATTCTGGCATCTGTAAGCTTCTGGAATCTCTACTGCAATTTTGTTCTCTTCTTTTATCCATTAGACATGATTCCATACATGACTTTGCCGAATTTGACTTTTTTGACATATATATCTTTGCCATTTCCTTGTTTTGGTACTTCAGTTTCTTTTTTACTTCATTTACTTTTATATATTTTGAATTTCTAGCTTTTATAGCCAGTAGATATTGCAATGAGCATATAAGAATAAAGAGAAGAATACTTTTGCCCAGACTAGATGTTTTCAATTTTCATTTTCAGAGGACTTGCATGAGTTTTTATTCAGCAAAGGTCCATTTTGATGGGCAATATAACTGCATGATTTTTACAATTTTTTCTCTTTTCTAGTTTCTGTTGCTCATCCCGGTTGAAATTCTGCGATGGTTCATTATTCTCCTTTCTGGTGCTGCCTCAGCAAGTTTTGTTGCTTTGAACCTGAGGTCGTATATTGAGGGGAATGATCTTTCGGTTCTGATAGTTGCTGCATTTTTCTTGCAAATGGCTTTGGCAATCTTCATCAAAGTGTGGTTCTTTCCTTGAGCAAGCTCACTCCATTTTTCGCTATCATCGGACCATATCTTAGTTTTGTTTACCCCTTAACTAAAGAATGGTGTTTCCCCTTGGTTGATGTTGGAAGTTCTCGGTCCCTGTAACTTGTGTGATGAATCGCAAAGGATCAACAGAAAAGAACGTGGACAGTCCATAGTTTTTATGATTGGAAGTGATCATTTTATCATAACAACAATCTCTAACTAGCCCACGGTTTTGTTTGCAGAGCTCTGAGATGGCATTCCCTCTCTATGAATATCGTTTGATTATAAAATTTCATCGGTAGTATTCCACTCAAACACGGATGTCATTGTAAATAGATATTAAAGAATGTACTTTGAACATTGGTGTGATGTGATTGAATTTGAATACAACTCGAAAAAGCATATGCC ATGTCATCGGTTGCGATTTCAGGCCAGGTTCCGACGCCATCTAGTTTTGCTGGGCTGAATTTCTGCTCCTTTGTCTGCATATTTTATCTTATCCTTTTTTTGGTGGATCAACAGGCGGTAATCAATGAAGAGACTGAGAAAAGAGGCACAGACAATGAAACACCAGAAGCAAGTATGCAGACGTTCCCCCCAACTAATGGAGGGGACAGAGGGAGAGGTTATCAAACTCTTGAAAGTCCAAGTGATTCTCAGCAGCAACCATCAAATGACTGGAAGGGGGTGTTTAGTGTATCATCTTACACTCAATATTTCAATGTGGATACGGACATTGTCATGAATAGATTGATTAGTTCCTTGTATCCCATGGGTGGAGACTTTTCCAGCAAGATCGATGCAAATCCTGATCTATATGGGCTCGTGTGGATCACCACTACATTGGTATTTGTCCTTGCGGCACTAGGAAACTGTGCGACCTTCCTCATGCAAAGACGAAGTGATCACGGTGCTGCGTGGAGTTTTGATGTCAGCTATATGAATGTGGCTGCTGGGTCTGTCTATGGCTATGCGATTGTGGTGCCCATGGCATTTTACTTTTCACTTCAGTACTTGGGGTCAAATTCTAGCCTCATAAGATTTTGGTGCTTGTGGGGATACTCTCTGTTCATTTTTATTCTGGCATCTTTTCTGTTGCTCATCCCGGTTGAAATTCTGCGATGGTTCATTATTCTCCTTTCTGGTGCTGCCTCAGCAAGTTTTGTTGCTTTGAACCTGAGGTCGTATATTGAGGGGAATGATCTTTCGGTTCTGATAGTTGCTGCATTTTTCTTGCAAATGGCTTTGGCAATCTTCATCAAAGTGTGGTTCTTTCCTTGAGCAAGCTCACTCCATTTTTCGCTATCATCGGACCATATCTTAGTTTTGTTTACCCCTTAACTAAAGAATGGTGTTTCCCCTTGGTTGATGTTGGAAGTTCTCGGTCCCTGTAACTTGTGTGATGAATCGCAAAGGATCAACAGAAAAGAACGTGGACAGTCCATAGTTTTTATGATTGGAAGTGATCATTTTATCATAACAACAATCTCTAACTAGCCCACGGTTTTGTTTGCAGAGCTCTGAGATGGCATTCCCTCTCTATGAATATCGTTTGATTATAAAATTTCATCGGTAGTATTCCACTCAAACACGGATGTCATTGTAAATAGATATTAAAGAATGTACTTTGAACATTGGTGTGATGTGATTGAATTTGAATACAACTCGAAAAAGCATATGCC ATGTCATCGGTTGCGATTTCAGGCCAGGTTCCGACGCCATCTAGTTTTGCTGGGCTGAATTTCTGCTCCTTTGTCTGCATATTTTATCTTATCCTTTTTTTGGTGGATCAACAGGCGGTAATCAATGAAGAGACTGAGAAAAGAGGCACAGACAATGAAACACCAGAAGCAAGTATGCAGACGTTCCCCCCAACTAATGGAGGGGACAGAGGGAGAGGTTATCAAACTCTTGAAAGTCCAAGTGATTCTCAGCAGCAACCATCAAATGACTGGAAGGGGGTGTTTAGTGTATCATCTTACACTCAATATTTCAATGTGGATACGGACATTGTCATGAATAGATTGATTAGTTCCTTGTATCCCATGGGTGGAGACTTTTCCAGCAAGATCGATGCAAATCCTGATCTATATGGGCTCGTGTGGATCACCACTACATTGGTATTTGTCCTTGCGGCACTAGGAAACTGTGCGACCTTCCTCATGCAAAGACGAAGTGATCACGGTGCTGCGTGGAGTTTTGATGTCAGCTATATGAATGTGGCTGCTGGGTCTGTCTATGGCTATGCGATTGTGGTGCCCATGGCATTTTACTTTTCACTTCAGTACTTGGGGTCAAATTCTAGCCTCATAAGATTTTGGTGCTTGTGGGGATACTCTCTGTTCATTTTTATTCTGGCATCTTTTCTGTTGCTCATCCCGGTTGAAATTCTGCGATGGTTCATTATTCTCCTTTCTGGTGCTGCCTCAGCAAGTTTTGTTGCTTTGAACCTGAGGTCGTATATTGAGGGGAATGATCTTTCGGTTCTGATAGTTGCTGCATTTTTCTTGCAAATGGCTTTGGCAATCTTCATCAAAGTGTGGTTCTTTCCTTGA MSSVAISGQVPTPSSFAGLNFCSFVCIFYLILFLVDQQAVINEETEKRGTDNETPEASMQTFPPTNGGDRGRGYQTLESPSDSQQQPSNDWKGVFSVSSYTQYFNVDTDIVMNRLISSLYPMGGDFSSKIDANPDLYGLVWITTTLVFVLAALGNCATFLMQRRSDHGAAWSFDVSYMNVAAGSVYGYAIVVPMAFYFSLQYLGSNSSLIRFWCLWGYSLFIFILASFLLLIPVEILRWFIILLSGAASASFVALNLRSYIEGNDLSVLIVAAFFLQMALAIFIKVWFFP Homology
BLAST of ClCG11G006590 vs. NCBI nr
Match: XP_004138449.1 (protein YIPF1 homolog [Cucumis sativus] >KGN45748.1 hypothetical protein Csa_005560 [Cucumis sativus]) HSP 1 Score: 464.9 bits (1195), Expect = 5.0e-127 Identity = 237/252 (94.05%), Postives = 247/252 (98.02%), Query Frame = 0
BLAST of ClCG11G006590 vs. NCBI nr
Match: XP_008441401.1 (PREDICTED: protein YIPF1 homolog isoform X1 [Cucumis melo]) HSP 1 Score: 462.6 bits (1189), Expect = 2.5e-126 Identity = 237/252 (94.05%), Postives = 247/252 (98.02%), Query Frame = 0
BLAST of ClCG11G006590 vs. NCBI nr
Match: XP_038886570.1 (protein YIPF1 homolog [Benincasa hispida]) HSP 1 Score: 456.1 bits (1172), Expect = 2.3e-124 Identity = 233/252 (92.46%), Postives = 243/252 (96.43%), Query Frame = 0
BLAST of ClCG11G006590 vs. NCBI nr
Match: KAG7033330.1 (Protein YIPF1-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 447.2 bits (1149), Expect = 1.1e-121 Identity = 229/252 (90.87%), Postives = 241/252 (95.63%), Query Frame = 0
BLAST of ClCG11G006590 vs. NCBI nr
Match: XP_023550852.1 (protein YIPF1 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 445.3 bits (1144), Expect = 4.1e-121 Identity = 229/252 (90.87%), Postives = 242/252 (96.03%), Query Frame = 0
BLAST of ClCG11G006590 vs. ExPASy Swiss-Prot
Match: Q54TS4 (Protein YIPF1 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf1 PE=3 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.9e-21 Identity = 70/226 (30.97%), Postives = 122/226 (53.98%), Query Frame = 0
BLAST of ClCG11G006590 vs. ExPASy Swiss-Prot
Match: Q5RBL0 (Protein YIPF1 OS=Pongo abelii OX=9601 GN=YIPF1 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-15 Identity = 64/201 (31.84%), Postives = 108/201 (53.73%), Query Frame = 0
BLAST of ClCG11G006590 vs. ExPASy Swiss-Prot
Match: Q9Y548 (Protein YIPF1 OS=Homo sapiens OX=9606 GN=YIPF1 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.4e-15 Identity = 64/201 (31.84%), Postives = 107/201 (53.23%), Query Frame = 0
BLAST of ClCG11G006590 vs. ExPASy Swiss-Prot
Match: Q9BWQ6 (Protein YIPF2 OS=Homo sapiens OX=9606 GN=YIPF2 PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.4e-15 Identity = 79/239 (33.05%), Postives = 114/239 (47.70%), Query Frame = 0
BLAST of ClCG11G006590 vs. ExPASy Swiss-Prot
Match: Q6P6G5 (Protein YIPF1 OS=Rattus norvegicus OX=10116 GN=Yipf1 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.2e-14 Identity = 63/201 (31.34%), Postives = 106/201 (52.74%), Query Frame = 0
BLAST of ClCG11G006590 vs. ExPASy TrEMBL
Match: A0A0A0K8E4 (Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_6G008790 PE=3 SV=1) HSP 1 Score: 464.9 bits (1195), Expect = 2.4e-127 Identity = 237/252 (94.05%), Postives = 247/252 (98.02%), Query Frame = 0
BLAST of ClCG11G006590 vs. ExPASy TrEMBL
Match: A0A1S3B3D6 (Protein YIP OS=Cucumis melo OX=3656 GN=LOC103485530 PE=3 SV=1) HSP 1 Score: 462.6 bits (1189), Expect = 1.2e-126 Identity = 237/252 (94.05%), Postives = 247/252 (98.02%), Query Frame = 0
BLAST of ClCG11G006590 vs. ExPASy TrEMBL
Match: A0A6J1K0Z8 (Protein YIP OS=Cucurbita maxima OX=3661 GN=LOC111489666 PE=3 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 2.0e-121 Identity = 230/252 (91.27%), Postives = 242/252 (96.03%), Query Frame = 0
BLAST of ClCG11G006590 vs. ExPASy TrEMBL
Match: A0A6J1H7J3 (Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111461208 PE=3 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 5.8e-121 Identity = 227/252 (90.08%), Postives = 240/252 (95.24%), Query Frame = 0
BLAST of ClCG11G006590 vs. ExPASy TrEMBL
Match: A0A6J1FLJ3 (Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111445328 PE=3 SV=1) HSP 1 Score: 441.8 bits (1135), Expect = 2.2e-120 Identity = 227/252 (90.08%), Postives = 241/252 (95.63%), Query Frame = 0
BLAST of ClCG11G006590 vs. TAIR 10
Match: AT2G39805.1 (Integral membrane Yip1 family protein ) HSP 1 Score: 330.5 bits (846), Expect = 1.4e-90 Identity = 173/260 (66.54%), Postives = 214/260 (82.31%), Query Frame = 0
BLAST of ClCG11G006590 vs. TAIR 10
Match: AT2G39805.2 (Integral membrane Yip1 family protein ) HSP 1 Score: 328.6 bits (841), Expect = 5.2e-90 Identity = 173/261 (66.28%), Postives = 213/261 (81.61%), Query Frame = 0
BLAST of ClCG11G006590 vs. TAIR 10
Match: AT5G27490.1 (Integral membrane Yip1 family protein ) HSP 1 Score: 164.1 bits (414), Expect = 1.7e-40 Identity = 96/246 (39.02%), Postives = 149/246 (60.57%), Query Frame = 0
BLAST of ClCG11G006590 vs. TAIR 10
Match: AT3G05280.1 (Integral membrane Yip1 family protein ) HSP 1 Score: 162.2 bits (409), Expect = 6.5e-40 Identity = 98/246 (39.84%), Postives = 148/246 (60.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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