ClCG11G005610 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG11G005610
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr11: 6117767 .. 6117961 (-)
RNA-Seq ExpressionClCG11G005610
SyntenyClCG11G005610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGACGGCTTTCGGATCGGAGACCGAGAGGAGAGCGCGATCGAAAGGAGAGCGACACTGCGAGTGCGATGAGAGCGACAACGAGAGGAAATGGAAACAGCGAGGAGAGCGAGTCAGCGATACTGCCGAGACTGAGAGGGAGAATGGGAGAGGAGAGGAGACAGTACAGTGGGCACTAGGTTCTGCTTCTGAAAAAT

mRNA sequence

TGACGGCTTTCGGATCGGAGACCGAGAGGAGAGCGCGATCGAAAGGAGAGCGACACTGCGAGTGCGATGAGAGCGACAACGAGAGGAAATGGAAACAGCGAGGAGAGCGAGTCAGCGATACTGCCGAGACTGAGAGGGAGAATGGGAGAGGAGAGGAGACAGTACAGTGGGCACTAGGTTCTGCTTCTGAAAAAT

Coding sequence (CDS)

ATGAGAGCGACAACGAGAGGAAATGGAAACAGCGAGGAGAGCGAGTCAGCGATACTGCCGAGACTGAGAGGGAGAATGGGAGAGGAGAGGAGACAGTACAGTGGGCACTAG

Protein sequence

MRATTRGNGNSEESESAILPRLRGRMGEERRQYSGH
Homology
The following BLAST results are available for this feature:
BLAST of ClCG11G005610 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG11G005610 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG11G005610 vs.
Match NameE-valueIdentityDescription
BLAST of ClCG11G005610 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G005610.1ClCG11G005610.1mRNA