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ClCG11G004700 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTCCTGGACAACTTTTCCAAAATAAAGAAACAGAAAGTGTTTTTAAGTAAAACATTTTTGTCTCTTCAGTATTATAATATTTAATCTATAAAAATCATTTTTAGTCCCTAATCTATCAACTTCGGTTTATAATGATTTAGTTATTGTACTTTTAATTTAGTAGCAATTTAGGTCATAAACATCACTATGTAACAATTTAACGCTTATACTTTAAAATTTGTAACGATTTAATCTCTATCGTAAAAATTAGTGTTAAGATTTAATGAAATTTTCTGTATAAATAAACCAATAAATAAATTAGGAAATTCAATATTTTTATATAATACAAAATCTACATCTAATTTTGATGAATTTTGAATTTTTTTCAAATTTGAAAGTAAAAAAATCATATTGTTACGTACTAAAATTTAGAAATTATAATAAAATTGAAAGTAAATAGTTACCAACCAAATTTATTAAATTGTTAAAATTTTAGAGAACAAATATATTTTTTTAACTAAAATAAAAAAAAATGTATATGTATAATTACGCTGATGTAATTAGAGAGAAATGGCAAAACGGTAATAAAGGTGAAGTAAGGGGGCAAAGAGTTAGCGTACTGTTACTTAAAGTAAGGTTTCTCCGAGTAATTGGAGACAAACAAGACAAGCAATGAGCTCCAAAACCAACACACTCCCAAATCCTCTCAGAAATTACCTTAGAAGAAGAACCAAACGATCTTTAACCGATTCCCGCCGTCGCTCCCACCGCCGTCACTGCCCCGCCCTCCGCTCTAACAATGGAAGCCGGCGGGATACGACCCCCACATCGCCCCGTGGCTCCGACGTCTCCGCCAAACTGGATGCCCTCCAGACCCTCATTCCGCCCCAATCCAACGCCCAACCCCGCCAAACGGATCAGTTGTTCAAGGAAACTGCCGATTACATTGTTCTTTTGAAAACCCGGGTCGTCATTTTGCAGAAGCTGGTTGAGTTTTTTGGATCCGCCTGCACCGACTCTCAAAACGCCGTCGTTTCATAGCTCTCTCTCTCTCTCTTCTTTTTCTTTTTACTTCTTGTAATTACGAGGAAACAAAAAAATAAATAGATCGAGAAGAATGAAATTAAAAGAAAAACAGAAAAAAAAAAAAATATTGAAAGAAAGACGTCATGTGGTCTTCTTTCTTCCCTTGGTCATGTTAATTCCCTTATTAGTCAACCCACATGAGATGATGGATAGTAGAAATTTTATGCTAATCGTTTTGGTGTACTTTTAATTGAGTTCTCTTTTGTTAGATTAGAAAGTGA ATGGGGTATAATTACGCTGATGTAATTAGAGAGAAATGGCAAAACGGTAATAAAGGTGAAGTAAGGGGGCAAAGAGTTAGCGTACTGTTACTTAAAGTTTCTCCGAGTAATTGGAGACAAACAAGACAAGCAATGAGCTCCAAAACCAACACACTCCCAAATCCTCTCAGAAATTACCTTAGAAGAAGAACCAAACGATCTTTAACCGATTCCCGCCGTCGCTCCCACCGCCGTCACTGCCCCGCCCTCCGCTCTAACAATGGAAGCCGGCGGGATACGACCCCCACATCGCCCCGTGGCTCCGACGTCTCCGCCAAACTGGATGCCCTCCAGACCCTCATTCCGCCCCAATCCAACGCCCAACCCCGCCAAACGGATCAGTTGTTCAAGGAAACTGCCGATTACATTGTTCTTTTGAAAACCCGGGTCATTAGAAAGTGA ATGGGGTATAATTACGCTGATGTAATTAGAGAGAAATGGCAAAACGGTAATAAAGGTGAAGTAAGGGGGCAAAGAGTTAGCGTACTGTTACTTAAAGTTTCTCCGAGTAATTGGAGACAAACAAGACAAGCAATGAGCTCCAAAACCAACACACTCCCAAATCCTCTCAGAAATTACCTTAGAAGAAGAACCAAACGATCTTTAACCGATTCCCGCCGTCGCTCCCACCGCCGTCACTGCCCCGCCCTCCGCTCTAACAATGGAAGCCGGCGGGATACGACCCCCACATCGCCCCGTGGCTCCGACGTCTCCGCCAAACTGGATGCCCTCCAGACCCTCATTCCGCCCCAATCCAACGCCCAACCCCGCCAAACGGATCAGTTGTTCAAGGAAACTGCCGATTACATTGTTCTTTTGAAAACCCGGGTCATTAGAAAGTGA MGYNYADVIREKWQNGNKGEVRGQRVSVLLLKVSPSNWRQTRQAMSSKTNTLPNPLRNYLRRRTKRSLTDSRRRSHRRHCPALRSNNGSRRDTTPTSPRGSDVSAKLDALQTLIPPQSNAQPRQTDQLFKETADYIVLLKTRVIRK Homology
BLAST of ClCG11G004700 vs. NCBI nr
Match: KAA0039441.1 (transcription factor UPBEAT1-like [Cucumis melo var. makuwa] >TYK00630.1 transcription factor UPBEAT1-like [Cucumis melo var. makuwa]) HSP 1 Score: 108.2 bits (269), Expect = 6.0e-20 Identity = 68/103 (66.02%), Postives = 77/103 (74.76%), Query Frame = 0
BLAST of ClCG11G004700 vs. NCBI nr
Match: KAG6578552.1 (hypothetical protein SDJN03_23000, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 96.3 bits (238), Expect = 2.4e-16 Identity = 64/104 (61.54%), Postives = 74/104 (71.15%), Query Frame = 0
BLAST of ClCG11G004700 vs. NCBI nr
Match: KAG7016112.1 (hypothetical protein SDJN02_21216, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 96.3 bits (238), Expect = 2.4e-16 Identity = 64/104 (61.54%), Postives = 74/104 (71.15%), Query Frame = 0
BLAST of ClCG11G004700 vs. NCBI nr
Match: XP_022993697.1 (uncharacterized protein LOC111489609 [Cucurbita maxima]) HSP 1 Score: 71.6 bits (174), Expect = 6.2e-09 Identity = 57/108 (52.78%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of ClCG11G004700 vs. NCBI nr
Match: KAG7986517.1 (hypothetical protein I3843_03G085300 [Carya illinoinensis]) HSP 1 Score: 58.9 bits (141), Expect = 4.2e-05 Identity = 44/93 (47.31%), Postives = 58/93 (62.37%), Query Frame = 0
BLAST of ClCG11G004700 vs. ExPASy TrEMBL
Match: A0A5D3BNP5 (Transcription factor UPBEAT1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002510 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 2.9e-20 Identity = 68/103 (66.02%), Postives = 77/103 (74.76%), Query Frame = 0
BLAST of ClCG11G004700 vs. ExPASy TrEMBL
Match: A0A6J1JTK8 (uncharacterized protein LOC111489609 OS=Cucurbita maxima OX=3661 GN=LOC111489609 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.0e-09 Identity = 57/108 (52.78%), Postives = 67/108 (62.04%), Query Frame = 0
BLAST of ClCG11G004700 vs. ExPASy TrEMBL
Match: A0A5N6QW57 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_007655 PE=4 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 1.7e-04 Identity = 45/92 (48.91%), Postives = 56/92 (60.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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