ClCG11G004240 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG11G004240
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptiontRNA-methyltransferase non-catalytic subunit trm6MTase subunit
LocationCG_Chr11: 4523623 .. 4524315 (-)
RNA-Seq ExpressionClCG11G004240
SyntenyClCG11G004240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCCGTCAATTTCTACGACATAAGAGCGGAGAAAGCGAACGCGATTCTCAAGTATCGACAGCTCAGGAAAATCGCTAACCTGTTTCGATTCATCGAATTGTGTTTGATTCTCGTCGTGATCTCGAGATTTTCCAGCCATTTACCGAGCGCCTTCAAGAACTACAGCGAGTACTTCCGCTGCTTGTCAGTGACATTAATCAGTCCTCGCTTCGTGTTTCTGATCGGAAACGCTATAGTCATCACTCTTTTCGCTAAATCTGGACAGTTCTCCGCTAAGCATCCAAGCAAGAAGAATCCGGTTGCCGATCTCTACGAGGAGTTCATCCGAAACAGCGAGAAGGATCAGAAAACTCGACGCGCTGAGATCGAGTATCGAATCAAGCAGATCGATGACAGCCGCGGCGACGCCTCGATATCTGTCAAAAAAATCGTCAATCCTCAAGAAATTAAACGTTATCAGAGGAGTAAATCAGAGAAAATGGAGGTCGTACAGCGAGAGAATCCGGATCGTGAACTACGACGATCGGAGACAGAGAAATGCAAGAAAATCGTCGAATTGAGGGAAGACACAAGAAATAGCTCGTATCCGGAAGATGGAATGAGCAACGAGGAGTTCCGGCAGACGGTGGAGGCGTTCATAGCGCGGCAACAGAGGCTGCGAAGGGAGGAAGAATTCAGTGTACTTTAG

mRNA sequence

ATGGAGTCCGTCAATTTCTACGACATAAGAGCGGAGAAAGCGAACGCGATTCTCAAGTATCGACAGCTCAGGAAAATCGCTAACCTGTTTCGATTCATCGAATTGTGTTTGATTCTCGTCGTGATCTCGAGATTTTCCAGCCATTTACCGAGCGCCTTCAAGAACTACAGCGAGTACTTCCGCTGCTTGTCAGTGACATTAATCAGTCCTCGCTTCGTGTTTCTGATCGGAAACGCTATAGTCATCACTCTTTTCGCTAAATCTGGACAGTTCTCCGCTAAGCATCCAAGCAAGAAGAATCCGGTTGCCGATCTCTACGAGGAGTTCATCCGAAACAGCGAGAAGGATCAGAAAACTCGACGCGCTGAGATCGAGTATCGAATCAAGCAGATCGATGACAGCCGCGGCGACGCCTCGATATCTGTCAAAAAAATCGTCAATCCTCAAGAAATTAAACGTTATCAGAGGAGTAAATCAGAGAAAATGGAGGTCGTACAGCGAGAGAATCCGGATCGTGAACTACGACGATCGGAGACAGAGAAATGCAAGAAAATCGTCGAATTGAGGGAAGACACAAGAAATAGCTCGTATCCGGAAGATGGAATGAGCAACGAGGAGTTCCGGCAGACGGTGGAGGCGTTCATAGCGCGGCAACAGAGGCTGCGAAGGGAGGAAGAATTCAGTGTACTTTAG

Coding sequence (CDS)

ATGGAGTCCGTCAATTTCTACGACATAAGAGCGGAGAAAGCGAACGCGATTCTCAAGTATCGACAGCTCAGGAAAATCGCTAACCTGTTTCGATTCATCGAATTGTGTTTGATTCTCGTCGTGATCTCGAGATTTTCCAGCCATTTACCGAGCGCCTTCAAGAACTACAGCGAGTACTTCCGCTGCTTGTCAGTGACATTAATCAGTCCTCGCTTCGTGTTTCTGATCGGAAACGCTATAGTCATCACTCTTTTCGCTAAATCTGGACAGTTCTCCGCTAAGCATCCAAGCAAGAAGAATCCGGTTGCCGATCTCTACGAGGAGTTCATCCGAAACAGCGAGAAGGATCAGAAAACTCGACGCGCTGAGATCGAGTATCGAATCAAGCAGATCGATGACAGCCGCGGCGACGCCTCGATATCTGTCAAAAAAATCGTCAATCCTCAAGAAATTAAACGTTATCAGAGGAGTAAATCAGAGAAAATGGAGGTCGTACAGCGAGAGAATCCGGATCGTGAACTACGACGATCGGAGACAGAGAAATGCAAGAAAATCGTCGAATTGAGGGAAGACACAAGAAATAGCTCGTATCCGGAAGATGGAATGAGCAACGAGGAGTTCCGGCAGACGGTGGAGGCGTTCATAGCGCGGCAACAGAGGCTGCGAAGGGAGGAAGAATTCAGTGTACTTTAG

Protein sequence

MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPSAFKNYSEYFRCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKHPSKKNPVADLYEEFIRNSEKDQKTRRAEIEYRIKQIDDSRGDASISVKKIVNPQEIKRYQRSKSEKMEVVQRENPDRELRRSETEKCKKIVELREDTRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFSVL
Homology
BLAST of ClCG11G004240 vs. NCBI nr
Match: XP_038900483.1 (uncharacterized protein LOC120087694 [Benincasa hispida])

HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105
Identity = 215/227 (94.71%), Postives = 219/227 (96.48%), Query Frame = 0

Query: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPSAFKNYSEYF 60
           MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLP+AFKN SEYF
Sbjct: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPTAFKNSSEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKHPSKKNPVADLYEEFIRNSEKDQKTR 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAK PSKKN VADLYEEFI+NSEK+QKTR
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFIQNSEKNQKTR 120

Query: 121 RAEIEYRIKQIDDSRGDASISVKKIVNPQEIKRYQRSKSEKMEVVQRENPDRELRRSETE 180
           RAEIEYRIKQIDDSRGD+SISVKKIVNPQEIKRYQRSKSEKMEVVQREN DRELRRSETE
Sbjct: 121 RAEIEYRIKQIDDSRGDSSISVKKIVNPQEIKRYQRSKSEKMEVVQRENLDRELRRSETE 180

Query: 181 KCKKIVELREDTRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEF 228
           K KKIV LRED RNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEF
Sbjct: 181 KFKKIVGLREDRRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEF 227

BLAST of ClCG11G004240 vs. NCBI nr
Match: KAG7010922.1 (hypothetical protein SDJN02_27720, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350.9 bits (899), Expect = 8.3e-93
Identity = 194/233 (83.26%), Postives = 208/233 (89.27%), Query Frame = 0

Query: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPSAFKNYSEYF 60
           MESVNFYD+RA K NAILKYRQ+RKIANLFRFIELCLILVVI+RFSS+LPSAFKN  EYF
Sbjct: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVITRFSSNLPSAFKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKHPSKKNPVADLYEEFIRNSEKDQKTR 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAK PSKKN VADLYEEF++NSEK+QKTR
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120

Query: 121 RAEIEYRIKQIDDSRG----DASISVKKIVNPQEIKRYQRSKSEKMEVVQRENPDRELRR 180
           RAEIEYR+KQIDDSRG    D SI++KKI    EIK YQRS+SEK+ VVQRENP RELRR
Sbjct: 121 RAEIEYRVKQIDDSRGNGNSDTSIAIKKI---GEIKHYQRSESEKIGVVQRENPHRELRR 180

Query: 181 SETEKCKKIVELREDTRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFSV 230
           SETEKCKKIV L E+T+N   PED MSNEEFRQTVEAFIARQQRLRREEEF V
Sbjct: 181 SETEKCKKIVRLSEETKNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCV 230

BLAST of ClCG11G004240 vs. NCBI nr
Match: XP_022146107.1 (uncharacterized protein LOC111015401 [Momordica charantia])

HSP 1 Score: 350.1 bits (897), Expect = 1.4e-92
Identity = 189/229 (82.53%), Postives = 204/229 (89.08%), Query Frame = 0

Query: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPSAFKNYSEYF 60
           MESVNFYDIRAEKANAILK+RQLRKIANLFRFIELCL+LV+ISRFSSHLPSA KN  EYF
Sbjct: 1   MESVNFYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKHPSKKNPVADLYEEFIRNSEKDQKTR 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAK PSKKN VADLYE+FI+NSEK+QKTR
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTR 120

Query: 121 RAEIEYRIKQIDDSRGDASISVKKIVNPQEIKRYQRSKSEKMEVVQRENPDRELRRSETE 180
            AEIEYR KQID   GDAS++ KK+VNP+EIK Y+RS+SEK+ V Q+ENP RELRRSETE
Sbjct: 121 HAEIEYRTKQIDGD-GDASVAAKKVVNPEEIKLYRRSQSEKIAVAQQENPQRELRRSETE 180

Query: 181 KCKKIVELREDTRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFSV 230
           KCKK+V   E    SSYPED MSNEEFRQTVEAFIARQQRLRREEE  V
Sbjct: 181 KCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCV 228

BLAST of ClCG11G004240 vs. NCBI nr
Match: XP_022986604.1 (uncharacterized protein LOC111484294 isoform X1 [Cucurbita maxima])

HSP 1 Score: 347.8 bits (891), Expect = 7.1e-92
Identity = 194/235 (82.55%), Postives = 208/235 (88.51%), Query Frame = 0

Query: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPSAFKNYSEYF 60
           MESVNFYD+RA K NAILKYRQ+RKIANLFRFIELCLILVV++RFSS+LPSAFKN  EYF
Sbjct: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVMTRFSSNLPSAFKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKHPSKKNPVADLYEEFIRNSEKDQKTR 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAK PSKKN VADLYEEF++NSEK+QKTR
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120

Query: 121 RAEIEYRIKQIDDSRG------DASISVKKIVNPQEIKRYQRSKSEKMEVVQRENPDREL 180
           RAEIEYR+KQIDDSRG      D SI++KKI    EIK YQRS+SEK+ VVQRENP REL
Sbjct: 121 RAEIEYRVKQIDDSRGNGNGNSDTSIAIKKI---GEIKHYQRSESEKIGVVQRENPHREL 180

Query: 181 RRSETEKCKKIVELREDTRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFSV 230
           RRSETEK KKIV L E+TRN S PED MSNEEFRQTVEAFIARQQRLRREEEF V
Sbjct: 181 RRSETEKYKKIVRLSEETRNRSSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCV 232

BLAST of ClCG11G004240 vs. NCBI nr
Match: XP_008460958.1 (PREDICTED: uncharacterized protein LOC103499689 [Cucumis melo] >KAA0045570.1 uncharacterized protein E6C27_scaffold243G00730 [Cucumis melo var. makuwa] >TYK28824.1 uncharacterized protein E5676_scaffold303G00270 [Cucumis melo var. makuwa])

HSP 1 Score: 344.7 bits (883), Expect = 6.0e-91
Identity = 192/231 (83.12%), Postives = 209/231 (90.48%), Query Frame = 0

Query: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPSAFKNYSEYF 60
           MESVNFYDIR EKANAILKYRQ RKIANLFRFIELCLIL+VISRFSSHLP+A KN++EYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKHPSKKNPVADLYEEFIRNSEK-DQKT 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAK PSKKN VADLYEEFI+NSEK +QK+
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKS 120

Query: 121 RRAEIEYRIKQIDDSRGDASISVKKIV-NPQEIKRYQRSKSEKMEVVQRENPDRE-LRRS 180
            R EI Y+IK ID+SRG AS+SV+K+V NP+E KRYQR KSEKMEVV RE  DRE L+RS
Sbjct: 121 PRTEINYQIKHIDESRGKASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRS 180

Query: 181 ETEKCKKIVELREDTRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFS 229
           ETEKCKK+VEL+E  RNSSYPED MSNEEFRQTVEAFIARQQRL+REEEFS
Sbjct: 181 ETEKCKKMVELKEGRRNSSYPEDVMSNEEFRQTVEAFIARQQRLQREEEFS 231

BLAST of ClCG11G004240 vs. ExPASy TrEMBL
Match: A0A6J1CYN5 (uncharacterized protein LOC111015401 OS=Momordica charantia OX=3673 GN=LOC111015401 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 6.9e-93
Identity = 189/229 (82.53%), Postives = 204/229 (89.08%), Query Frame = 0

Query: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPSAFKNYSEYF 60
           MESVNFYDIRAEKANAILK+RQLRKIANLFRFIELCL+LV+ISRFSSHLPSA KN  EYF
Sbjct: 1   MESVNFYDIRAEKANAILKHRQLRKIANLFRFIELCLVLVLISRFSSHLPSAVKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKHPSKKNPVADLYEEFIRNSEKDQKTR 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAK PSKKN VADLYE+FI+NSEK+QKTR
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEDFIKNSEKNQKTR 120

Query: 121 RAEIEYRIKQIDDSRGDASISVKKIVNPQEIKRYQRSKSEKMEVVQRENPDRELRRSETE 180
            AEIEYR KQID   GDAS++ KK+VNP+EIK Y+RS+SEK+ V Q+ENP RELRRSETE
Sbjct: 121 HAEIEYRTKQIDGD-GDASVAAKKVVNPEEIKLYRRSQSEKIAVAQQENPQRELRRSETE 180

Query: 181 KCKKIVELREDTRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFSV 230
           KCKK+V   E    SSYPED MSNEEFRQTVEAFIARQQRLRREEE  V
Sbjct: 181 KCKKLVRFSEGAAKSSYPEDRMSNEEFRQTVEAFIARQQRLRREEEHCV 228

BLAST of ClCG11G004240 vs. ExPASy TrEMBL
Match: A0A6J1JGH7 (uncharacterized protein LOC111484294 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484294 PE=4 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.4e-92
Identity = 194/235 (82.55%), Postives = 208/235 (88.51%), Query Frame = 0

Query: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPSAFKNYSEYF 60
           MESVNFYD+RA K NAILKYRQ+RKIANLFRFIELCLILVV++RFSS+LPSAFKN  EYF
Sbjct: 1   MESVNFYDVRAAKMNAILKYRQVRKIANLFRFIELCLILVVMTRFSSNLPSAFKNSGEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKHPSKKNPVADLYEEFIRNSEKDQKTR 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAK PSKKN VADLYEEF++NSEK+QKTR
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNSVADLYEEFVQNSEKNQKTR 120

Query: 121 RAEIEYRIKQIDDSRG------DASISVKKIVNPQEIKRYQRSKSEKMEVVQRENPDREL 180
           RAEIEYR+KQIDDSRG      D SI++KKI    EIK YQRS+SEK+ VVQRENP REL
Sbjct: 121 RAEIEYRVKQIDDSRGNGNGNSDTSIAIKKI---GEIKHYQRSESEKIGVVQRENPHREL 180

Query: 181 RRSETEKCKKIVELREDTRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFSV 230
           RRSETEK KKIV L E+TRN S PED MSNEEFRQTVEAFIARQQRLRREEEF V
Sbjct: 181 RRSETEKYKKIVRLSEETRNRSSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCV 232

BLAST of ClCG11G004240 vs. ExPASy TrEMBL
Match: A0A5D3DZ88 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00270 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.9e-91
Identity = 192/231 (83.12%), Postives = 209/231 (90.48%), Query Frame = 0

Query: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPSAFKNYSEYF 60
           MESVNFYDIR EKANAILKYRQ RKIANLFRFIELCLIL+VISRFSSHLP+A KN++EYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKHPSKKNPVADLYEEFIRNSEK-DQKT 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAK PSKKN VADLYEEFI+NSEK +QK+
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKS 120

Query: 121 RRAEIEYRIKQIDDSRGDASISVKKIV-NPQEIKRYQRSKSEKMEVVQRENPDRE-LRRS 180
            R EI Y+IK ID+SRG AS+SV+K+V NP+E KRYQR KSEKMEVV RE  DRE L+RS
Sbjct: 121 PRTEINYQIKHIDESRGKASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRS 180

Query: 181 ETEKCKKIVELREDTRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFS 229
           ETEKCKK+VEL+E  RNSSYPED MSNEEFRQTVEAFIARQQRL+REEEFS
Sbjct: 181 ETEKCKKMVELKEGRRNSSYPEDVMSNEEFRQTVEAFIARQQRLQREEEFS 231

BLAST of ClCG11G004240 vs. ExPASy TrEMBL
Match: A0A1S3CDN2 (uncharacterized protein LOC103499689 OS=Cucumis melo OX=3656 GN=LOC103499689 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.9e-91
Identity = 192/231 (83.12%), Postives = 209/231 (90.48%), Query Frame = 0

Query: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPSAFKNYSEYF 60
           MESVNFYDIR EKANAILKYRQ RKIANLFRFIELCLIL+VISRFSSHLP+A KN++EYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNFTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKHPSKKNPVADLYEEFIRNSEK-DQKT 120
           R LSVTLISPRFVFLIGNAIVITLFAKSGQFSAK PSKKN VADLYEEFI+NSEK +QK+
Sbjct: 61  RYLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKNLVADLYEEFIKNSEKNNQKS 120

Query: 121 RRAEIEYRIKQIDDSRGDASISVKKIV-NPQEIKRYQRSKSEKMEVVQRENPDRE-LRRS 180
            R EI Y+IK ID+SRG AS+SV+K+V NP+E KRYQR KSEKMEVV RE  DRE L+RS
Sbjct: 121 PRTEINYQIKHIDESRGKASVSVEKVVNNPEETKRYQRCKSEKMEVVLREKVDRELLQRS 180

Query: 181 ETEKCKKIVELREDTRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFS 229
           ETEKCKK+VEL+E  RNSSYPED MSNEEFRQTVEAFIARQQRL+REEEFS
Sbjct: 181 ETEKCKKMVELKEGRRNSSYPEDVMSNEEFRQTVEAFIARQQRLQREEEFS 231

BLAST of ClCG11G004240 vs. ExPASy TrEMBL
Match: A0A0A0LIS8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G248720 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 7.4e-87
Identity = 186/230 (80.87%), Postives = 204/230 (88.70%), Query Frame = 0

Query: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPSAFKNYSEYF 60
           MESVNFYDIR EKANAILKYRQ RKIANLFRFIELCLIL+VISRFSSHLP+A KN +EYF
Sbjct: 1   MESVNFYDIRTEKANAILKYRQFRKIANLFRFIELCLILIVISRFSSHLPTALKNSTEYF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKHPSKKNPVADLYEEFIRNSEK-DQKT 120
           RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAK PSKK+ VADLYEEFI+NSEK +QK+
Sbjct: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKDPSKKSLVADLYEEFIKNSEKNNQKS 120

Query: 121 RRAEIEYRIKQIDDSRGDASISVKKIV-NPQEIKRYQRSKSEKMEVVQRENPDRELRRSE 180
            R E    IK ID+SR  ASISV+KIV NP+E +RY+RSKSE+MEVV RE  DRE++RSE
Sbjct: 121 PRTE----IKHIDESRRKASISVEKIVNNPKETRRYERSKSERMEVVPREKVDREMQRSE 180

Query: 181 TEKCKKIVELREDTRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFS 229
           TEKCKK+VEL+E  RN SY EDGMSNEEFRQTVEAFIARQQRL+REEE S
Sbjct: 181 TEKCKKMVELKEGRRNRSYLEDGMSNEEFRQTVEAFIARQQRLQREEELS 226

BLAST of ClCG11G004240 vs. TAIR 10
Match: AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 119.0 bits (297), Expect = 5.0e-27
Identity = 87/236 (36.86%), Postives = 139/236 (58.90%), Query Frame = 0

Query: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPSAFKNYSEYF 60
           M+ + F  ++ EK+  IL ++ +R   +LFR  EL L++++IS+ S   PS  K   + F
Sbjct: 1   MDPIKFQHLKMEKSRGILNFQAIRSFTSLFRLFELLLLVILISKLS--FPSV-KISGDIF 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKH-PSKKNPVA---DLYEEFIRNSEKD 120
           +  +V L+SPRFVF IGNAIVITL AKSG++S+ H PSK    A   DLY+EF+  SEK 
Sbjct: 61  KEAAVFLVSPRFVFFIGNAIVITLLAKSGRYSSSHEPSKTATEAASNDLYQEFLHKSEKK 120

Query: 121 QKTRRAEIEYRIKQIDDSRGDASISVKKIVNPQEIKRYQRSKS-EKMEVVQRENPDRELR 180
           +    A    + +Q+    G   +S           R Q  K+ E ++ ++  N ++ ++
Sbjct: 121 KPVVYAT---KTEQLKKPSGGKRVS---------FGRSQSHKAFEAVKPLESTNGEKNMK 180

Query: 181 RSETEKCKKIVEL-REDTRNSSYPEDGMSNEEFRQTVEAFIARQQRLRREEEFSVL 231
           R  +EK  ++ +  ++       PEDGMSNE+FR  +EAFIARQ+R++++EE  ++
Sbjct: 181 RYVSEKHMRVCDSDKKVVVRVKKPEDGMSNEQFRTKIEAFIARQKRIQKDEEHLII 221

BLAST of ClCG11G004240 vs. TAIR 10
Match: AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-21
Identity = 82/250 (32.80%), Postives = 135/250 (54.00%), Query Frame = 0

Query: 1   MESVNFYDIRAEKANAILKYRQLRKIANLFRFIELCLILVVISRFSSHLPSAFKNYSEYF 60
           M+S +F +++AEKA A+ ++ +  +I   FR  E+C+ L+ I    S LP   +    + 
Sbjct: 1   MDSFDFDNVKAEKAKALRRFNRFCRIGRFFRAAEVCVALLFIFWTFSQLPFVVQISGAFL 60

Query: 61  RCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKHPSKKNPVADLYEEFIRNSEKDQKTR 120
           R ++  + +P FVFL+GN+IV+ L  KS   +    +  +   ++Y+ F+R+ E   K  
Sbjct: 61  RRIAAVISTPLFVFLLGNSIVVVLLTKSSDQTT--TAVASAETEIYQAFVRSVENRSKPS 120

Query: 121 RAE----IEYRIKQ--IDDSRGDASISVKKIVNPQEI--------KRYQRSKSEKMEVVQ 180
             +    I Y  KQ  + D   + +++V + +   EI        K Y RSKS+ +   Q
Sbjct: 121 DEDLTEGIVYDDKQVIVTDLDSNPNLTVDENMPHVEIDSDSSPHSKVYGRSKSD-VSGKQ 180

Query: 181 REN-----PDRELRRSETEK-CKKIVELREDTRNSSYPEDGMSNEEFRQTVEAFIARQQR 231
             N       R L+RSETEK CK+     +     +YPED +SNEEF++T+EAFIA+Q+ 
Sbjct: 181 SSNMVMMMMKRSLQRSETEKFCKETENDDDSEEEKNYPEDDLSNEEFQKTIEAFIAKQRM 240

BLAST of ClCG11G004240 vs. TAIR 10
Match: AT2G21560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39190.1); Has 3685 Blast hits to 2305 proteins in 270 species: Archae - 0; Bacteria - 156; Metazoa - 1145; Fungi - 322; Plants - 177; Viruses - 6; Other Eukaryotes - 1879 (source: NCBI BLink). )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 68/279 (24.37%), Postives = 125/279 (44.80%), Query Frame = 0

Query: 1   MESVNFYDIRAEKANAILKYRQLRKIANLF-RFIELCLILVVISRFSSHLPSAFKNYSEY 60
           M+S++    +  K   ++K  + + + +LF R IE+ L+++ +++    L    ++    
Sbjct: 1   MDSLSTQKAKPRKMKVVVKKSRAQVLLDLFYRVIEITLVIITLAKLCYQLVITVESSG-- 60

Query: 61  FRCLSVTLISPRFVFLIGNAIVITLFAKSGQFSAKHPSKKNPVADLYEEFIRNSEKDQKT 120
              L+  LI+    F++GN IVIT+  K G F+ +    +    D Y+EF+R S + ++ 
Sbjct: 61  ---LASFLINRHLAFVLGNTIVITIVVKCGFFANQETDARRNRNDFYDEFVRESSRGERR 120

Query: 121 RRAEIEYRIKQID-DSRGDASISVKKIVNPQEIKRYQRSK---SEKMEVVQRENPDRELR 180
              ++  R KQ + +S    SI   +     E KR  R+K   SE       E    +L+
Sbjct: 121 LHTDVICREKQSEVESVAKQSIEENRAKQSIEDKRQSRAKPSMSENRAKQSTEEKREKLK 180

Query: 181 RSE-----------------TEKCKKIVELREDTRNSSY--------------------- 231
           +SE                  +K ++IV   +D+   SY                     
Sbjct: 181 KSEISGRQSSGDESEKKDITVKKQRQIVAQNQDSPMKSYERSRSENHEGSKKSSCVQLKR 240

BLAST of ClCG11G004240 vs. TAIR 10
Match: AT4G39190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G21560.1); Has 5536 Blast hits to 3562 proteins in 401 species: Archae - 12; Bacteria - 497; Metazoa - 1363; Fungi - 374; Plants - 149; Viruses - 22; Other Eukaryotes - 3119 (source: NCBI BLink). )

HSP 1 Score: 54.3 bits (129), Expect = 1.5e-07
Identity = 69/266 (25.94%), Postives = 114/266 (42.86%), Query Frame = 0

Query: 30  FRFIELCLILVVISRFSSHLPSAFKNYSEYFRCLSVTLISPRFVFLIGNAIVITLFAKSG 89
           FR IE+ ++LV +++ S  L   F++ S      SV L +    F+IGNAIVI L AKSG
Sbjct: 32  FRAIEIVVVLVTLAKLSYELVVTFEDSS----VASVILANRSLAFVIGNAIVIALIAKSG 91

Query: 90  QFSAKHPSKKNPVADLYEEFI-------------------------------------RN 149
               +    K    DLYE+F+                                      N
Sbjct: 92  ILLNQEHDPKCKSNDLYEDFVLESSRRGGFSQDEMRSGEKQSEAENEAKQSITENKAKEN 151

Query: 150 SEK-------------DQKTRRAEIEYRIKQIDDSR------------------GDASIS 209
            EK             ++KT+R   E ++KQ    +                   D +++
Sbjct: 152 EEKQSITESRVKKSVTEKKTKRIISEKKVKQSKPEKLTKQSTSVNREKQSEVEHKDITMT 211

Query: 210 VKK--IVNPQEIKRYQRSKSEKMEVVQRENPDRELRRSETEKCKKIVELREDTRNSSYPE 226
           ++K  +   ++I+ YQRSKSE ++V+++ +  R L+RSET+   +  +            
Sbjct: 212 IEKQNLTEKRQIQSYQRSKSENLKVLEKSSCGR-LKRSETDASAERFD------------ 271

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038900483.11.9e-10594.71uncharacterized protein LOC120087694 [Benincasa hispida][more]
KAG7010922.18.3e-9383.26hypothetical protein SDJN02_27720, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022146107.11.4e-9282.53uncharacterized protein LOC111015401 [Momordica charantia][more]
XP_022986604.17.1e-9282.55uncharacterized protein LOC111484294 isoform X1 [Cucurbita maxima][more]
XP_008460958.16.0e-9183.12PREDICTED: uncharacterized protein LOC103499689 [Cucumis melo] >KAA0045570.1 unc... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CYN56.9e-9382.53uncharacterized protein LOC111015401 OS=Momordica charantia OX=3673 GN=LOC111015... [more]
A0A6J1JGH73.4e-9282.55uncharacterized protein LOC111484294 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A5D3DZ882.9e-9183.12Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S3CDN22.9e-9183.12uncharacterized protein LOC103499689 OS=Cucumis melo OX=3656 GN=LOC103499689 PE=... [more]
A0A0A0LIS87.4e-8780.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G248720 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT4G34560.15.0e-2736.86unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT5G66440.11.1e-2132.80unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G21560.11.6e-0924.37unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G39190.11.5e-0725.94unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 204..224
NoneNo IPR availablePANTHERPTHR33640TRANSMEMBRANE PROTEINcoord: 1..229
NoneNo IPR availablePANTHERPTHR33640:SF8TRANSMEMBRANE PROTEINcoord: 1..229

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G004240.1ClCG11G004240.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane