ClCG11G003744 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTTTCGTCTTCCATCGTCTTTGATTCCTCAGGCGAAGCAATTGCTGAGGAGGAGCTCGGGAAATCCATCGGCGGTTCCGAAAGGACATGTGGCGGTGTACGTCGGAGAGTTTCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATCTTTCGTTTCAACAGCTTCTCAGTCGAGCAGAAGAAGAGTTTGGATTTGATCATCCAGAGGGAGGTTTGACGATTCCTTGTGGAGAAGATGCGTTTATCGATCTCACTTCTAGATTGCAAGCTTGTTAA ATGGGGTTTCGTCTTCCATCGTCTTTGATTCCTCAGGCGAAGCAATTGCTGAGGAGGAGCTCGGGAAATCCATCGGCGGTTCCGAAAGGACATGTGGCGGTGTACGTCGGAGAGTTTCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATCTTTCGTTTCAACAGCTTCTCAGTCGAGCAGAAGAAGAGTTTGGATTTGATCATCCAGAGGGAGGTTTGACGATTCCTTGTGGAGAAGATGCGTTTATCGATCTCACTTCTAGATTGCAAGCTTGTTAA ATGGGGTTTCGTCTTCCATCGTCTTTGATTCCTCAGGCGAAGCAATTGCTGAGGAGGAGCTCGGGAAATCCATCGGCGGTTCCGAAAGGACATGTGGCGGTGTACGTCGGAGAGTTTCAGAGGAAGCGATTTGTGATTCCGATTTCGTATTTGAATCATCTTTCGTTTCAACAGCTTCTCAGTCGAGCAGAAGAAGAGTTTGGATTTGATCATCCAGAGGGAGGTTTGACGATTCCTTGTGGAGAAGATGCGTTTATCGATCTCACTTCTAGATTGCAAGCTTGTTAA MGFRLPSSLIPQAKQLLRRSSGNPSAVPKGHVAVYVGEFQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPEGGLTIPCGEDAFIDLTSRLQAC Homology
BLAST of ClCG11G003744 vs. NCBI nr
Match: XP_008457626.1 (PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo] >KAA0045667.1 auxin-responsive protein SAUR24-like [Cucumis melo var. makuwa] >TYJ99616.1 auxin-responsive protein SAUR24-like [Cucumis melo var. makuwa]) HSP 1 Score: 197.6 bits (501), Expect = 4.9e-47 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of ClCG11G003744 vs. NCBI nr
Match: XP_038901978.1 (auxin-responsive protein SAUR24-like [Benincasa hispida]) HSP 1 Score: 194.1 bits (492), Expect = 5.4e-46 Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of ClCG11G003744 vs. NCBI nr
Match: XP_011649267.1 (auxin-responsive protein SAUR24 [Cucumis sativus] >KGN61868.1 hypothetical protein Csa_006001 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 5.4e-46 Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of ClCG11G003744 vs. NCBI nr
Match: XP_022947579.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata] >XP_023533239.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo] >KAG6605031.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 189.9 bits (481), Expect = 1.0e-44 Identity = 90/94 (95.74%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of ClCG11G003744 vs. NCBI nr
Match: XP_023512614.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo] >KAG6571064.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 187.6 bits (475), Expect = 5.0e-44 Identity = 90/94 (95.74%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of ClCG11G003744 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.0e-27 Identity = 56/81 (69.14%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of ClCG11G003744 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 2.9e-26 Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 0
BLAST of ClCG11G003744 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 2.9e-26 Identity = 54/81 (66.67%), Postives = 68/81 (83.95%), Query Frame = 0
BLAST of ClCG11G003744 vs. ExPASy Swiss-Prot
Match: Q9FJF6 (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana OX=3702 GN=SAUR23 PE=2 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.1e-25 Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of ClCG11G003744 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 4.2e-25 Identity = 53/81 (65.43%), Postives = 67/81 (82.72%), Query Frame = 0
BLAST of ClCG11G003744 vs. ExPASy TrEMBL
Match: A0A5A7TUZ6 (Auxin-responsive protein SAUR24-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001900 PE=3 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 2.4e-47 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of ClCG11G003744 vs. ExPASy TrEMBL
Match: A0A1S3C5H8 (auxin-responsive protein SAUR24-like OS=Cucumis melo OX=3656 GN=LOC103497275 PE=3 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 2.4e-47 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of ClCG11G003744 vs. ExPASy TrEMBL
Match: A0A0A0LJ85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258640 PE=3 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 2.6e-46 Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 0
BLAST of ClCG11G003744 vs. ExPASy TrEMBL
Match: A0A6J1G776 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111451402 PE=3 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 4.9e-45 Identity = 90/94 (95.74%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of ClCG11G003744 vs. ExPASy TrEMBL
Match: A0A6J1FY01 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448842 PE=3 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 3.2e-44 Identity = 89/94 (94.68%), Postives = 93/94 (98.94%), Query Frame = 0
BLAST of ClCG11G003744 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 122.9 bits (307), Expect = 1.4e-28 Identity = 56/81 (69.14%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of ClCG11G003744 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 119.0 bits (297), Expect = 2.1e-27 Identity = 55/81 (67.90%), Postives = 67/81 (82.72%), Query Frame = 0
BLAST of ClCG11G003744 vs. TAIR 10
Match: AT5G18050.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 119.0 bits (297), Expect = 2.1e-27 Identity = 54/81 (66.67%), Postives = 68/81 (83.95%), Query Frame = 0
BLAST of ClCG11G003744 vs. TAIR 10
Match: AT5G18060.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 117.1 bits (292), Expect = 7.8e-27 Identity = 54/80 (67.50%), Postives = 67/80 (83.75%), Query Frame = 0
BLAST of ClCG11G003744 vs. TAIR 10
Match: AT5G18010.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 115.2 bits (287), Expect = 3.0e-26 Identity = 53/81 (65.43%), Postives = 67/81 (82.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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