ClCG11G002595 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCATTGGGAAAGTATTTTCGTGTTTCACAAATACAAGTGCTTCTACTTCCTGCTTCTGCTTGGAAATTGAAGACAAACACCCATTAATGGCGAAACAAACAGCTTCATCTCAGCTTCTCAGATTCAAAGATGTGATTCCTCATCAAAACCAAACCCTCGCTCTTCATTTGAACCCCAAGGTCAGATCACATCCCTAACAATTTTTTTTTTTTAATTATTATATATATATATATATATAAGTGTTTATTTTCTAAGAAAATCAATCAAAATATTTACAAATATAACAAAATTTTATTTGTCTATCTATGACTATTTGTATATGATAGATACATATAATAGTATATCGAGATATGATATTTTGCTATTGTTTATAAATATTTTCAACAGTTTTATCATTTAAAGTTATGAATACTTTGAGTGTTGTCAAATTGGAGTTCATGTTTGTTTTCAATAAATCTTTAAATTGGTCTGTTATTATTATTTAACCATAATGATTATTTTTTCCTTTTTTTTTCTTAAAAAATGGTAAATTATTAAAAAAAAAAAAAAAAACTTATTGAAAATACTAGAACAAAGTTGAAATAAAATGGTTCAAAAGGCTTAGTTTGCATTTAAATTAGAGAAGCCTATCTAGAGAATGGAGAATGGAGGAAGGGTGGGGTTAAAACAATTTCGGTAAGCTAAACGAGATTCCTTGTCTCCTGTCCCCATTCCTATCCTGTTTTATCTTATGTTTTAAATATTTATTATTATTAATTATTATTGTAAGTTTGTTACTAGGTGTACACAATTCACTACATTTTAAGTTTTATAGATGAATGAGTTGGATTATTTTATATGTTTGAACCATAAAGTTGAACATTTGGAGATTTAATAAAAAATTTCTCTCTTCCTATGAAATTAATCTCTCTTTATCTTTTTTAATGTTAAAGTTTATTTTGGTAACTATTTGATTTTTTATTTTTAGTTTTTGAAGACTAAATCTATAAATACCTGTTACACATTTAAATTTCTTGGTTTGTAATATACTTTTTACTAATATTTTACAAAACTAAGCTAAAATTTAAAAAATAATAAAAGTAGTTTTTGAAAACTTGTTTTTTTGTTTTTAAAGTTTCGCTAAGAATTGAACACTTGTAATTAAAAAATGTACAAACTCTTATAAAAACTTAAAGATAAAATATACTTAATTTTCAAAAACCAAAAAATAAAATGTTACCACATGAGTTTTCAAACGAGTAAGTATTTAATTAGAAAAATAAATAAATAAATAAATAAAGTTTAGTTTAATTGAATTTTGGGTGAAAAAACTAGAAAGGAATTAATTTTCTTTCCATGTGAATTTTCTACCATAAATTTATGCGTTAATTTCTATAAAAATAATCGAAAAATTTTGCGGAGATAGAATAAAACTGAGAGACCATCTCATTCCCACCTGCCATGAGCATCTAGTTTAATGTAAACTTGAAAAGTTATTTTCATTTTAGCTCACAATAGGATTTCAAATTGTATTGAATGCTAAGTACACATCTTGATAAAGTTCAAATAAAATTTGAAATAAATATGATAGTTTATGAATTAAAACAAAATGTCAACCAAGTATGACACCGTGACTCAATTTGGTCGAGTATTTTAGATAATAATAAAATAAAAAAAACCATAAATTTGAATCTCTGCCACGTATTTGTTGAATTAAAAAATAAAAATAAACTTAAATCTTAAAAATTATAGTCGTACGAAACTAATAATTTATTATATTATTATTTTAAAAAACAAGCATGTGTAATTGTGCAAGTAACAGGCACTTCAGTTTTAAATAAAAATAAACTTATAGATAAAAAAAAATTTACTTTTTTTTTTTCGTACTAACATTTCAAAAATCATATCCAATATTCATTTTTTAAATTAAAATAAATTGAGAAGTACATTTACTTTTACTGTTGTGATTTTGTAAATACCCCAAAAATTTTCAGGTGGTGGTGCTAAGGGTGTCGATGCATTGCAATGGCTGTGCCAGAAGGGTTGAGAAGCACATCTCCAAGATAGATGGTAATTTTTTAATAATTATTAATAATTTTTTTTCTAGCACTTTAGTTAAATAACAAAAAAAATGAAATAAAAAATTACTTATTGAATTAAATTTAAATTATTATAGACTATGAAAGGAGTTCAATTTTCAAGGGAAGACACTAATTTAAGCACAATTTTGTAATCTTGGAGTTTGCTTCGGATTTAATTTTTCAAATTTCGTAACTTAGATTTGTTGTATTAAAATGTTAGAAAAAAATCAATTTTTATAAGTGAATTATTGAACATTGTCAAATGAAACATTCTTTGTAAGTATCAAAGATGAAGACCCAAAATAAATATATATCATAACAAATATATTAAATTTATATTATTGTTATATCTTTATATATATATATATATATATATAACATCTTTATTATTGCTTACAAGAATTTAATTTTCAAGAATAGAAAAAAAACACTCATCATTCTTCCTTCCATAATTTAAATGCAATATTGAAAATTTGGAGTTTGAATATTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGTGAAACATTGCACATGGTCAAATGATACTTTTTGTGAATACAAAAAATAAGAGTTAAAATAAAAATATCATAACAAAAATATTATATTTCATAGTATGAACTAAAATTATTAGGAAAAAATTGTAACGCACCTACTCGTTTACTAGTATTTTATAAAAGATTGTGAGGTTCATCATTTTATTATTAAAAAAAAAAAAAAAACATAATTTCAGGTGTGGACTCATATGAGGTAGATATGGAAAGGGAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTTTGAAGTCATGCAATGCATATCTAAAGTGAAAAGTGTAGAGATTCTCGAGCATCGAGATTGA ATGGGCATTGGGAAAGTATTTTCGTGTTTCACAAATACAAGTGCTTCTACTTCCTGCTTCTGCTTGGAAATTGAAGACAAACACCCATTAATGGCGAAACAAACAGCTTCATCTCAGCTTCTCAGATTCAAAGATGTGATTCCTCATCAAAACCAAACCCTCGCTCTTCATTTGAACCCCAAGGTGGTGGTGCTAAGGGTGTCGATGCATTGCAATGGCTGTGCCAGAAGGGTTGAGAAGCACATCTCCAAGATAGATGGTGTGGACTCATATGAGGTAGATATGGAAAGGGAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTTTGAAGTCATGCAATGCATATCTAAAGTGAAAAGTGTAGAGATTCTCGAGCATCGAGATTGA ATGGGCATTGGGAAAGTATTTTCGTGTTTCACAAATACAAGTGCTTCTACTTCCTGCTTCTGCTTGGAAATTGAAGACAAACACCCATTAATGGCGAAACAAACAGCTTCATCTCAGCTTCTCAGATTCAAAGATGTGATTCCTCATCAAAACCAAACCCTCGCTCTTCATTTGAACCCCAAGGTGGTGGTGCTAAGGGTGTCGATGCATTGCAATGGCTGTGCCAGAAGGGTTGAGAAGCACATCTCCAAGATAGATGGTGTGGACTCATATGAGGTAGATATGGAAAGGGAGATGGTGGTTGTTACTGGAGATGTTTTTCCTTTTGAAGTCATGCAATGCATATCTAAAGTGAAAAGTGTAGAGATTCTCGAGCATCGAGATTGA MGIGKVFSCFTNTSASTSCFCLEIEDKHPLMAKQTASSQLLRFKDVIPHQNQTLALHLNPKVVVLRVSMHCNGCARRVEKHISKIDGVDSYEVDMEREMVVVTGDVFPFEVMQCISKVKSVEILEHRD Homology
BLAST of ClCG11G002595 vs. NCBI nr
Match: XP_031736582.1 (uncharacterized protein LOC116402031 [Cucumis sativus] >KAE8651518.1 hypothetical protein Csa_019330 [Cucumis sativus]) HSP 1 Score: 184.9 bits (468), Expect = 4.4e-43 Identity = 102/136 (75.00%), Postives = 111/136 (81.62%), Query Frame = 0
BLAST of ClCG11G002595 vs. NCBI nr
Match: XP_008458177.1 (PREDICTED: uncharacterized protein LOC103497691 [Cucumis melo] >KAA0061568.1 copper-binding family protein [Cucumis melo var. makuwa]) HSP 1 Score: 176.0 bits (445), Expect = 2.0e-40 Identity = 100/141 (70.92%), Postives = 112/141 (79.43%), Query Frame = 0
BLAST of ClCG11G002595 vs. NCBI nr
Match: XP_022999545.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 164.1 bits (414), Expect = 8.0e-37 Identity = 87/130 (66.92%), Postives = 102/130 (78.46%), Query Frame = 0
BLAST of ClCG11G002595 vs. NCBI nr
Match: XP_022946348.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 160.2 bits (404), Expect = 1.2e-35 Identity = 86/130 (66.15%), Postives = 100/130 (76.92%), Query Frame = 0
BLAST of ClCG11G002595 vs. NCBI nr
Match: KAG7030420.1 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 160.2 bits (404), Expect = 1.2e-35 Identity = 86/130 (66.15%), Postives = 100/130 (76.92%), Query Frame = 0
BLAST of ClCG11G002595 vs. ExPASy Swiss-Prot
Match: Q8LDS4 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=NAKR1 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.8e-13 Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of ClCG11G002595 vs. ExPASy Swiss-Prot
Match: Q8RXH8 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=NAKR3 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 4.2e-12 Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 0
BLAST of ClCG11G002595 vs. ExPASy Swiss-Prot
Match: Q58FZ0 (Protein SODIUM POTASSIUM ROOT DEFECTIVE 2 OS=Arabidopsis thaliana OX=3702 GN=NAKR2 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.6e-11 Identity = 30/73 (41.10%), Postives = 49/73 (67.12%), Query Frame = 0
BLAST of ClCG11G002595 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-07 Identity = 29/69 (42.03%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of ClCG11G002595 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 9.0e-07 Identity = 24/57 (42.11%), Postives = 41/57 (71.93%), Query Frame = 0
BLAST of ClCG11G002595 vs. ExPASy TrEMBL
Match: A0A5A7V1Y2 (Copper-binding family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001300 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 9.9e-41 Identity = 100/141 (70.92%), Postives = 112/141 (79.43%), Query Frame = 0
BLAST of ClCG11G002595 vs. ExPASy TrEMBL
Match: A0A1S3C8H9 (uncharacterized protein LOC103497691 OS=Cucumis melo OX=3656 GN=LOC103497691 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 9.9e-41 Identity = 100/141 (70.92%), Postives = 112/141 (79.43%), Query Frame = 0
BLAST of ClCG11G002595 vs. ExPASy TrEMBL
Match: A0A6J1KFP0 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493873 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 3.9e-37 Identity = 87/130 (66.92%), Postives = 102/130 (78.46%), Query Frame = 0
BLAST of ClCG11G002595 vs. ExPASy TrEMBL
Match: A0A6J1G3J1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450448 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 5.6e-36 Identity = 86/130 (66.15%), Postives = 100/130 (76.92%), Query Frame = 0
BLAST of ClCG11G002595 vs. ExPASy TrEMBL
Match: A0A2N9H2C1 (HMA domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS33661 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 1.1e-31 Identity = 74/129 (57.36%), Postives = 96/129 (74.42%), Query Frame = 0
BLAST of ClCG11G002595 vs. TAIR 10
Match: AT3G24450.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 114.4 bits (285), Expect = 6.8e-26 Identity = 60/130 (46.15%), Postives = 86/130 (66.15%), Query Frame = 0
BLAST of ClCG11G002595 vs. TAIR 10
Match: AT5G02600.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 75.9 bits (185), Expect = 2.7e-14 Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of ClCG11G002595 vs. TAIR 10
Match: AT5G02600.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 75.9 bits (185), Expect = 2.7e-14 Identity = 35/62 (56.45%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of ClCG11G002595 vs. TAIR 10
Match: AT3G53530.1 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 72.4 bits (176), Expect = 3.0e-13 Identity = 33/64 (51.56%), Postives = 48/64 (75.00%), Query Frame = 0
BLAST of ClCG11G002595 vs. TAIR 10
Match: AT2G37390.1 (Chloroplast-targeted copper chaperone protein ) HSP 1 Score: 70.5 bits (171), Expect = 1.1e-12 Identity = 30/73 (41.10%), Postives = 49/73 (67.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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