ClCG11G002490 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG11G002490
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPeroxiredoxins prx-1 prx-2 prx-3
LocationCG_Chr11: 2601690 .. 2606951 (+)
RNA-Seq ExpressionClCG11G002490
SyntenyClCG11G002490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATTGTTAGACTTTAAAACCTCAGTGTTACAGGATTCGAACCAGGCTCAAGACTCAGGTTTGACACCCATTTCATGGCGGCCGAGGAAGGAAAGTTCATTCGGACTCGTCGCAACCAGCTCGACTTCCCATCCCGCAACTGTACGTTCATTCTCTTATTCGGTTATCTTACTTTCTTTGGTTTTATCGTCGATTTTGGAGCTCAAATTTGAATGAAGTATGTAAAATTCGTTACTCTGCACGACTTAGATTTATTATTCGATCTGATTCTGTTATCTTAGGGTTTTGAATCGTTATTAGCTTCTGATACATCTCCTTGTAAGCAGGGATCGATGGAAATTTTACTAGAAAAATAAGTCATGGCATTGTGGGGTTAACAATAGCACATCTTCGTTGAAACACAACACATAAAACTTCAATTTAATTGAATCCAACTCAACTTAAAACATCAAAAGTTGGTTTTGGTTTTTGAAAATTATGTTTGTTTCTTGACAATTTATTTACTATAGTGTTCATCATTTCTGAGGTCTTAGCCCAATTCCAAAAACAAAACAAACTTAGCTTGGATTTTGAAAATATTCTAATAAGTGGAAAGCAGTGTTAACTTCAAAATCCTATAATCAACGTGGCTTGAATTTTTTGGGTCATCACGTTCTTTAAACACTCCTACCTTATCATGCACTGTGGTGTTAAATTTGGATGAAGTCTTGTCATCAACACGACACTTTTGGATAGTTTTTAGCTTATGATAGTTTTACTTATAAACCAGAATTATGGAAATTTTCTGGGGAAATGAACATCGACATTGTTTTACAGAGAAGGATGCCTTTTTTTTCTGATTACAAAGTGGAGAATGCTTCAAGATATCTCAATTGCTCTTTTGTTCTTATTTCTTTCCATTTTGCATGTTTTCCCGAGAATATATTTAGTAGAATGAATGTACTCAATTTTGTTGCCTTAAGTTTTTGGTAGGTCAGTAGGTGGCCGTGATATAATTTACTGCATGCCCAATCAATATATTAAGATCCATTGTACCATGTTTGACTTGGCTTTGTCATCAAGTCAGAGTCTTAGCTCACAGATGAGGAGACAGAAGAGGCTCATAAAAGATTAAATGCACTGAAACCCATTAAGTTAAGGTTTTTGTTATAGCGGCAATTTAACATGCCCGTGCAAGCAAATTAATTTCGATTCTTGCTTGCTTTAAGTCATTGTTTGGTAATAATTTGAAGATGTTGGAATTTGGTTCATGTATGTACTCGGTGACAATTTCTCGAAATATTCAATTGCGTATATTCCTTGAAAAGTCCAGTCATCTTAGACGTTTTAAGCATTTGGCACATGCTTGGAGGTAGGGGTGGCAAAAACCGAAAAAAACCAACGAACTGAACCAAACCGGACCGGTCCAATTTTTTTAAGAATAGAGAACCAACGGTTCACGAGAGAGCAAAACCGAATGGTTCAGTTCGGTCATTGGTTCATTATCCTAAAAAATTGCAAAAAACCAAACCGAACTGTAGTAAAAAAAAAAATCAGGTTGGTTCGGTTCAAGAATTGAAATCGATGTGAACCGGTTTTCAATGGTTCTTCTTTATTGTGAACTGATAAGGTTCATGGTTTGGCCCAAAATCGGACCGAACCGAACCGTGCACACTCCTAGAGGAATTATAGGAAGTAGCTTTCTTATTGTAGCCAACCCCTTGGTAGTGCACGGTCTAAAAAATTCTCTTGGTTCCAATCATGGGGGATTTGGACATCTGACTTCTAAGGATGTGAGTGATGTCCTGACCAATTGAAGCTATGGTCATGTTGGCATTCCTATGGGTTCTAATCATGGCATTTTTCCTCTTTTATTTTTTGATCTGTTTTTTGCTATGTTGGCAAGAGCATCACTCCTAACATGCATTATGTTCATGGAATATCCCTACCAATTCTTGGAGGCTTCCAAAACCAACTTTAGGAGATATCAAGTTCTTAAAGTTTGAACACGGAAAGCTTCGTCCTACGAGGCTAGGACCTTGGAAATATTTTCAAACATTTCAAACCCTTATCATTATAATTATGGCCTGGTATAATTATATAAGTTATTTTTTCTAGATATACTATTTTATAGGAGATCAGCAAAGTCTTTTTTTAAAAAAAAAAAATTAGAGAGAGAAAAAATAGAGATCATATTCAACAAGAGGAGGAAAAAAAAAAAAAACAAGAGGTTGAGTGGAGGGAACTTCAGTTTGGTCCCTTGTTAAACCTTACAAATTAGCCCTAAATTGTGTTTTACCCACTTGTTAAACCTACATATTTTCTTTTATTTTTTACGCAGCTCTAAACTCTAATTTAATAAACTAATACATATACCTGAATAGAAAGCGATCACATCAGAAAGAAGTTATCAATATGTTAACAACTAGGATGGTTTGTGATTTATCTAAACGACAAGGACCATGTTGAAAATTTAAAAATAATAAAGATTAAACCGAAACTAAACTCAACCTACAGGGACTAAATAGTCCAAGCTAGAGATACTAAGTTGAAACTTTTAAAACCATAATGACCTAATAGAAATTTTAGCCCTACCATAGAGACCAAATTTGTAATTTAACCTAAAACTAATGGTTAGCTGCATGATTTCTAAAACATATCGCTTAGTTTCCATTGTAGCATAACTGACAGGCACATCAAATTATTTCTTGTAAACAGGGCGTAGACCATAGTTTAGATGTATGAAATGCCATTATCACCACTCTTTGTCTTGGGATCCTTCTGAAAAGGATGAAGTAGAAGAAAGAGGAAGAAGAGGCTGGCAAGCTTGAGCAGTACTAATGTTGAATGCTGAGTTAAGTATCCTCTGTTAATGTATGCTTATATCCTGGCAAGTGAGAATGATAATATCTTGGTCGTTATTTTGGAGTACCACTTGAAATTGAATACCCTTTTCCTTGTAATTTGATTGTAGGCTGTTATTGTTTGTGTATTTATATACCAAAGAACTTAATCACTCATGAGCAACGAGTACTGAAGCGCAGTATGCATTTTGGTGCCTATTGAACATCTGGGCAGCTCTAAGTAGATTGAGAGGTCGTTCTGCAGAGGTAGAAAATTTCTCCAATCGGTTTGCTGCAAATTGGTAAACTTCTGTTAACATTGCCTAATTGCACTAGTTTGCTCCATTCTTCTGCCTTATCAGCTCTTTAAATCCAAAAGCTTGAAAACGAAGACGAATTTAATTACACGGTTGTAATTATTTCTTGAGTTTTGAGATTATCAAATAGTATAAAGTTGAAACATATGATGAAATGAAACGGTTAAGCTGTTTCAGTGTTTTGTTTTTTCTTTACTTTTTATTTGAATTTAATAACTTCATGACTTTTTCCAAATCCCGATAACCGAAATGGAATATGTTATCATGTATGTAGGCCCATCCCTGTTCTCATGTATAATAAAGCTATAAAACAAAACAAGGGCATTCCTGATATTGAAGCATCATATGCTAATAGATAAACATTGAAGGATGATGAACCATCCTAGGCATCAAATTATTATTTATATTTTATTTAATAATTTTGATATAATTCTAGTATTTTTTTAATTTTATCCTTTTTATGACATATTAAGTAGGGACATATTTGTCTTTTTATTATGATCTATAATGTGGCAATAGAGTTTTCATTAGGATTATCTAAAGTCTTGCCATTAGGTTGTTTCGGTAGATTACAATGAATCGAATTTTGACCTTTGTGTTTCTTTCAAGTTTAGTCTAGAGAGTTTCTTGAATTTTGCAATTTATGTAGAATTGCATGTCAAGCACATTCAAGTGGTATTGATCATCCTATCTTGCGGAGTGTTCCAATCATAGTCTAGGAAACTTGTTCTTTATCTCAAGATCTTTGATCTTTAGGCAATTCGTGTCTAACCTAATCCTTTGGGTTGAAATCGACTTGATTTTAGGGTTTTAGTGTTTGAGAATAAGTGGTTCACATATTCAAAGGATTCTTAATTTCAAGTCACTAGGGTTTTCCTATCAAATTTCTTTTAATCTCTCTGTCTCTCTCTAACACTGTATAAGGTAAAACAGGACTAACTTTTTAACTGAGGGAATCGGTATAATTTGATGGGGCCTCTTTTCTTAATTTTTGGAACTTTTCTAGCAGATTCATCCACTCCTGAGAATGACCCGCTTCAATTATTTATTGAGAGTATCTGATCCTCAATAATCAGTAGATATGAAAAGAAGAACCTTTTGATGTGGATAAGTTTAGTCACAGTTCCACAATTCAAAAGCAGCAAATAACTTTAGTTTTGATCTTCAGTAACTTACGTGTGCACTTTAGAACTTGTGCTTAATGGAAATTATATCTTTATTTCTCTCTTTTCTGATTTGTATTCAAATTGGGGAAGATATTGATATTATATCCTAGAATGATCATATCATCATTATTATTGATACTAAAGAAATATGAACTTAGCCAGATTCCTCTTTTTGACATAATGGATAGAGTGGGCTTTTTTGTATGGTTGCTTTCACTAAGGACAAATCAAGAAGAATCAAAATATCACCTCTTGAATTGAACTATAACTACTTCTAGCCTCACGCACTAGTTGAGGATAAATCTCTTAATTTTCATCATATTTATATTGTAATTAACAAGTCTTTTCCGCTTTTAAATCGTCAAGTTTCCATACTTCTTGCAGTCTCCAGGTATGGCCTCCGACGGCAGCCTTAGTGTTTCGGTTTCCACATCTCCTAAACATGGAAACAGAGATGCTGAGACGGTGACGTCGAGTTCGCCGAAAGGCCAGTGTTTGTGCTCGCCCACGGTGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACATCATCGGCGTGGATGAAACGTTCAAAATCAATGCCTGCCAACAACCCTGTGGCTTCTCTTTCGCCCAAAGAATCACATGGATCTTCCTAAGGCCATGGGGCGTGTGCATGAAGCTGAATACATGTAACACACCTTAAACTTATATCCTCTTAATTCTCTAAAGTTGTGGAGAAGAAAAGCTTTGATTTTATATCTCAACTTTGTATGGCATGGAATATATATAATATGTTTGCCTTTGCGTGTTCGCGCACACAACGTTTATCTGTGTATGTGTGGGAAAAGTAAATTTGTTCGAAAATTCTTCATTCTTGGTGTGGATCAAGCATGTAGAGTTGCATAACTTGTATCATTCTTTCTTGAAATATAATAGACTAATCTTCTTCTTCCTTTTGTACTACTTTGGGA

mRNA sequence

TCATTGTTAGACTTTAAAACCTCAGTGTTACAGGATTCGAACCAGGCTCAAGACTCAGGTTTGACACCCATTTCATGGCGGCCGAGGAAGGAAAGTTCATTCGGACTCGTCGCAACCAGCTCGACTTCCCATCCCGCAACTTCTCCAGGTATGGCCTCCGACGGCAGCCTTAGTGTTTCGGTTTCCACATCTCCTAAACATGGAAACAGAGATGCTGAGACGGTGACGTCGAGTTCGCCGAAAGGCCAGTGTTTGTGCTCGCCCACGGTGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACATCATCGGCGTGGATGAAACGTTCAAAATCAATGCCTGCCAACAACCCTGTGGCTTCTCTTTCGCCCAAAGAATCACATGGATCTTCCTAAGGCCATGGGGCGTGTGCATGAAGCTGAATACATGTAACACACCTTAAACTTATATCCTCTTAATTCTCTAAAGTTGTGGAGAAGAAAAGCTTTGATTTTATATCTCAACTTTGTATGGCATGGAATATATATAATATGTTTGCCTTTGCGTGTTCGCGCACACAACGTTTATCTGTGTATGTGTGGGAAAAGTAAATTTGTTCGAAAATTCTTCATTCTTGGTGTGGATCAAGCATGTAGAGTTGCATAACTTGTATCATTCTTTCTTGAAATATAATAGACTAATCTTCTTCTTCCTTTTGTACTACTTTGGGA

Coding sequence (CDS)

TCATTGTTAGACTTTAAAACCTCAGTGTTACAGGATTCGAACCAGGCTCAAGACTCAGGTTTGACACCCATTTCATGGCGGCCGAGGAAGGAAAGTTCATTCGGACTCGTCGCAACCAGCTCGACTTCCCATCCCGCAACTTCTCCAGGTATGGCCTCCGACGGCAGCCTTAGTGTTTCGGTTTCCACATCTCCTAAACATGGAAACAGAGATGCTGAGACGGTGACGTCGAGTTCGCCGAAAGGCCAGTGTTTGTGCTCGCCCACGGTGCATCAAGGCTCCTTTAGGTGTCGGCTTCATCGTTCGACATCATCGGCGTGGATGAAACGTTCAAAATCAATGCCTGCCAACAACCCTGTGGCTTCTCTTTCGCCCAAAGAATCACATGGATCTTCCTAA

Protein sequence

SLLDFKTSVLQDSNQAQDSGLTPISWRPRKESSFGLVATSSTSHPATSPGMASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKRSKSMPANNPVASLSPKESHGSS
Homology
[Close]
BLAST of ClCG11G002490 vs. NCBI nr
Match: KAA0061558.1 (hypothetical protein E6C27_scaffold41G001200 [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 3.1e-31
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 51  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 110
           MASDGSL VSVSTSPKH NRDAET+ SSSPKGQCLCSPT+HQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 111 SKSMPANNPVASLSPKESHGSS 133
           SKSMPANNPVASLSPK S GSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

[Close]
BLAST of ClCG11G002490 vs. NCBI nr
Match: KGN60621.1 (hypothetical protein Csa_019426 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 4.0e-31
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 51  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 110
           MASDGSLSVSVSTSPKH NRDAETV S+SPKGQCLCSPT+HQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLSVSVSTSPKHANRDAETVRSNSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 111 SKSMPANNPVASLSPKESHGSS 133
           SKSMP NNPVASLSPKES  SS
Sbjct: 61  SKSMPTNNPVASLSPKESLESS 82

[Close]
BLAST of ClCG11G002490 vs. NCBI nr
Match: KAG7030425.1 (hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.1 bits (362), Expect = 8.9e-31
Identity = 76/85 (89.41%), Postives = 79/85 (92.94%), Query Frame = 0 

Query: 48  SPGMASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAW 107
           S  MASDGSLSV VSTSPKHGNRDAETV SSSPKGQCLCSPT+HQGSFRCRLHRSTSSAW
Sbjct: 52  SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAW 111

Query: 108 MKRSKSMPANNPVASLSPKESHGSS 133
           MKRSKSMPA++PVASLS KES GSS
Sbjct: 112 MKRSKSMPADHPVASLSSKESLGSS 136

[Close]
BLAST of ClCG11G002490 vs. NCBI nr
Match: TYK10714.1 (hypothetical protein E5676_scaffold332G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 144.1 bits (362), Expect = 8.9e-31
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 51  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 110
           MASDGSL VSVS+SPKH NRDAET+ SSSPKGQCLCSPT+HQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLGVSVSSSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 111 SKSMPANNPVASLSPKESHGSS 133
           SKSMPANNPVASLSPK S GSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

[Close]
BLAST of ClCG11G002490 vs. NCBI nr
Match: XP_022946647.1 (uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946648.1 uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946649.1 uncharacterized protein LOC111450652 [Cucurbita moschata])

HSP 1 Score: 141.7 bits (356), Expect = 4.4e-30
Identity = 75/85 (88.24%), Postives = 78/85 (91.76%), Query Frame = 0 

Query: 48  SPGMASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAW 107
           S  MASDGSLSV VSTSPKHGNRDAETV SSSPKGQCLCSPT+HQGSFRCRLHRS SSAW
Sbjct: 40  SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAW 99

Query: 108 MKRSKSMPANNPVASLSPKESHGSS 133
           MKRSKSMPA++PVASLS KES GSS
Sbjct: 100 MKRSKSMPADHPVASLSSKESLGSS 124

[Close]
BLAST of ClCG11G002490 vs. ExPASy TrEMBL
Match: A0A5A7V1X5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G001200 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.5e-31
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 51  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 110
           MASDGSL VSVSTSPKH NRDAET+ SSSPKGQCLCSPT+HQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLGVSVSTSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 111 SKSMPANNPVASLSPKESHGSS 133
           SKSMPANNPVASLSPK S GSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

[Close]
BLAST of ClCG11G002490 vs. ExPASy TrEMBL
Match: A0A0A0LKU3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.9e-31
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 51  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 110
           MASDGSLSVSVSTSPKH NRDAETV S+SPKGQCLCSPT+HQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLSVSVSTSPKHANRDAETVRSNSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 111 SKSMPANNPVASLSPKESHGSS 133
           SKSMP NNPVASLSPKES  SS
Sbjct: 61  SKSMPTNNPVASLSPKESLESS 82

[Close]
BLAST of ClCG11G002490 vs. ExPASy TrEMBL
Match: A0A5D3CHP3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00230 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 4.3e-31
Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0 

Query: 51  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 110
           MASDGSL VSVS+SPKH NRDAET+ SSSPKGQCLCSPT+HQGSFRCRLHRSTSSAWMKR
Sbjct: 1   MASDGSLGVSVSSSPKHANRDAETMRSSSPKGQCLCSPTMHQGSFRCRLHRSTSSAWMKR 60

Query: 111 SKSMPANNPVASLSPKESHGSS 133
           SKSMPANNPVASLSPK S GSS
Sbjct: 61  SKSMPANNPVASLSPKGSLGSS 82

[Close]
BLAST of ClCG11G002490 vs. ExPASy TrEMBL
Match: A0A6J1G498 (uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC111450652 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.1e-30
Identity = 75/85 (88.24%), Postives = 78/85 (91.76%), Query Frame = 0 

Query: 48  SPGMASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAW 107
           S  MASDGSLSV VSTSPKHGNRDAETV SSSPKGQCLCSPT+HQGSFRCRLHRS SSAW
Sbjct: 40  SADMASDGSLSVVVSTSPKHGNRDAETVRSSSPKGQCLCSPTMHQGSFRCRLHRSMSSAW 99

Query: 108 MKRSKSMPANNPVASLSPKESHGSS 133
           MKRSKSMPA++PVASLS KES GSS
Sbjct: 100 MKRSKSMPADHPVASLSSKESLGSS 124

[Close]
BLAST of ClCG11G002490 vs. ExPASy TrEMBL
Match: A0A061GNT6 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037897 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 5.5e-18
Identity = 53/76 (69.74%), Postives = 60/76 (78.95%), Query Frame = 0 

Query: 51  MASDGSLSVSVSTSPKHGNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKR 110
           MAS G  +++VSTSPK  N +A   T+S   GQCLCSPT HQGSFRCR HRS+SSAWMKR
Sbjct: 1   MASHG--NITVSTSPKGSNSEAAVPTNSPKGGQCLCSPTTHQGSFRCRFHRSSSSAWMKR 60

Query: 111 SKSMPANNPVASLSPK 127
           SKSMPAN  +ASLSPK
Sbjct: 61  SKSMPANGSLASLSPK 74

[Close]
BLAST of ClCG11G002490 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related )

HSP 1 Score: 49.3 bits (116), Expect = 2.8e-06
Identity = 22/41 (53.66%), Postives = 27/41 (65.85%), Query Frame = 0 

Query: 77  SSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKRSKSMPAN 118
           SSS +  CLC+PT H GSFRCR HR  +   M R  S+P+N
Sbjct: 58  SSSVRQNCLCAPTTHPGSFRCRYHRRNAGLGMSRGTSVPSN 98

[Close]
BLAST of ClCG11G002490 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 1.8e-05
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0 

Query: 68  GNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKRSKSMPA 117
           G+R     TS + K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 29  GSRGLSRQTSMT-KTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

[Close]
BLAST of ClCG11G002490 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). )

HSP 1 Score: 46.6 bits (109), Expect = 1.8e-05
Identity = 26/49 (53.06%), Postives = 33/49 (67.35%), Query Frame = 0 

Query: 68  GNRDAETVTSSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKRSKSMPA 117
           G+R     TS + K  CLCSPT H GSFRCR+HRS S   ++R+KS+ A
Sbjct: 29  GSRGLSRQTSMT-KTNCLCSPTTHPGSFRCRIHRSLS---LQRTKSIEA 73

[Close]
BLAST of ClCG11G002490 vs. TAIR 10
Match: AT1G24577.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67910.2); Has 115 Blast hits to 115 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 4.4e-04
Identity = 24/53 (45.28%), Postives = 34/53 (64.15%), Query Frame = 0 

Query: 77  SSSPKGQCLCSPTVHQGSFRCRLHRSTSSAWMKRSKSMPANNPVASLSPKESH 130
           +S  K  C+CSPT H GSF+C+LHR+ S   ++R+KS+   N + SL  K  H
Sbjct: 25  TSITKTICICSPTTHPGSFKCKLHRTPS---LQRNKSV-ETNILQSLMTKPDH 73

[Close]
BLAST of ClCG11G002490 vs. TAIR 10
Match: AT3G56500.1 (serine-rich protein-related )

HSP 1 Score: 41.6 bits (96), Expect = 5.8e-04
Identity = 18/42 (42.86%), Postives = 28/42 (66.67%), Query Frame = 0 

Query: 81  KGQCLCSPTVHQGSFRCRLHRSTSSAWMKRSKSMPANNPVAS 123
           K  C+C+PT H+GSFRCRLHRS++++    +  +    P+ S
Sbjct: 62  KTVCICAPTKHEGSFRCRLHRSSATSHGAATAELHLPKPLLS 103

The following BLAST results are available for this feature:
BLAST of ClCG11G002490 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0061558.13.1e-3191.46hypothetical protein E6C27_scaffold41G001200 [Cucumis melo var. makuwa][more]
KGN60621.14.0e-3191.46hypothetical protein Csa_019426 [Cucumis sativus][more]
KAG7030425.18.9e-3189.41hypothetical protein SDJN02_08772 [Cucurbita argyrosperma subsp. argyrosperma][more]
TYK10714.18.9e-3190.24hypothetical protein E5676_scaffold332G00230 [Cucumis melo var. makuwa][more]
XP_022946647.14.4e-3088.24uncharacterized protein LOC111450652 [Cucurbita moschata] >XP_022946648.1 unchar... [more]
BLAST of ClCG11G002490 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG11G002490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7V1X51.5e-3191.46Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LKU31.9e-3191.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004705 PE=4 SV=1[more]
A0A5D3CHP34.3e-3190.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1G4982.1e-3088.24uncharacterized protein LOC111450652 OS=Cucurbita moschata OX=3662 GN=LOC1114506... [more]
A0A061GNT65.5e-1869.74Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_037897 PE=4 SV=1[more]
BLAST of ClCG11G002490 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13227.12.8e-0653.66serine-rich protein-related [more]
AT1G67910.11.8e-0553.06unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G67910.21.8e-0553.06unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G24577.14.4e-0445.28unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G56500.15.8e-0442.86serine-rich protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availablePANTHERPTHR33132OSJNBB0118P14.9 PROTEINcoord: 46..127
NoneNo IPR availablePANTHERPTHR33132:SF37SERINE-RICH PROTEIN-LIKE PROTEINcoord: 46..127

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG11G002490.1ClCG11G002490.1mRNA