ClCG11G002160 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG11G002160
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	E3 ubiquitin-protein ligase RNF181-like
Location	CG_Chr11: 2265563 .. 2265931 (+)
RNA-Seq Expression	ClCG11G002160
Synteny	ClCG11G002160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACTGTCTTGCCTGTAACAGCAACATCAGCTAATTATGCAGCCAGTAACATCATGGACATTGAATCAATGTTCGATCTCGACACCGTCCTCACCGGAGCCGACGACTTCTATTACAACGAAAACGTTGTAGCGCCACCACCCGTGGTGGTCGCCGACTTGCCAACGGTGGCTGTTGAGGACGTATGTGCGGTTTGCATGGAGGATTTCCTGCCGAACGAAGGCGGTAAACAGATCGCCTGCGGGCATGTGTACCATCAATCTTGTATATCCTCTTGGCTCTCCGTCGGCGACTCTTGCCCTCTTTGCCGCCGTCATATCTCCTCCGGTGACAAAAGGGAGGCGCCTAAAACCGTACAAGTTTAG

mRNA sequence

ATGGCCACTGTCTTGCCTGTAACAGCAACATCAGCTAATTATGCAGCCAGTAACATCATGGACATTGAATCAATGTTCGATCTCGACACCGTCCTCACCGGAGCCGACGACTTCTATTACAACGAAAACGTTGTAGCGCCACCACCCGTGGTGGTCGCCGACTTGCCAACGGTGGCTGTTGAGGACGTATGTGCGGTTTGCATGGAGGATTTCCTGCCGAACGAAGGCGGTAAACAGATCGCCTGCGGGCATGTGTACCATCAATCTTGTATATCCTCTTGGCTCTCCGTCGGCGACTCTTGCCCTCTTTGCCGCCGTCATATCTCCTCCGGTGACAAAAGGGAGGCGCCTAAAACCGTACAAGTTTAG

Coding sequence (CDS)

ATGGCCACTGTCTTGCCTGTAACAGCAACATCAGCTAATTATGCAGCCAGTAACATCATGGACATTGAATCAATGTTCGATCTCGACACCGTCCTCACCGGAGCCGACGACTTCTATTACAACGAAAACGTTGTAGCGCCACCACCCGTGGTGGTCGCCGACTTGCCAACGGTGGCTGTTGAGGACGTATGTGCGGTTTGCATGGAGGATTTCCTGCCGAACGAAGGCGGTAAACAGATCGCCTGCGGGCATGTGTACCATCAATCTTGTATATCCTCTTGGCTCTCCGTCGGCGACTCTTGCCCTCTTTGCCGCCGTCATATCTCCTCCGGTGACAAAAGGGAGGCGCCTAAAACCGTACAAGTTTAG

Protein sequence

MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTVQV

Homology

[Close]

BLAST of ClCG11G002160 vs. NCBI nr
Match: XP_038877426.1 (E3 ubiquitin-protein ligase RNF126-like [Benincasa hispida])

HSP 1 Score: 203.0 bits (515), Expect = 1.5e-48
Identity = 102/122 (83.61%), Postives = 110/122 (90.16%), Query Frame = 0


Query: 1   MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAV 60
           MATVLP T TSA YAAS IMDIESMFDLDTVLTGADDFYYN+ VVAPPPVVVADLPTVA 
Sbjct: 1   MATVLPET-TSA-YAASYIMDIESMFDLDTVLTGADDFYYNKTVVAPPPVVVADLPTVAG 60

Query: 61  EDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTV 120
           +DVCAVC+EDFLP+E GKQI CGHVYHQSC+SSWLSVGDSCPLCRRHI+S ++ EAPKT 
Sbjct: 61  KDVCAVCIEDFLPDESGKQIPCGHVYHQSCLSSWLSVGDSCPLCRRHIASDEEMEAPKTE 120

Query: 121 QV 123
            V
Sbjct: 121 TV 120

[Close]

BLAST of ClCG11G002160 vs. NCBI nr
Match: KAA0061529.1 (RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa])

HSP 1 Score: 202.6 bits (514), Expect = 1.9e-48
Identity = 96/114 (84.21%), Postives = 101/114 (88.60%), Query Frame = 0


Query: 9   ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCM 68
           ATSAN+AA  IMDIESMFDLDTVL+GADDFYY    VAPPPVVVADLPTVA +D CAVCM
Sbjct: 2   ATSANHAARYIMDIESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATDDACAVCM 61

Query: 69  EDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTVQV 123
           EDFLP+EGGKQI CGHVYHQSCISSWLSVGDSCPLCRRHI+ GDK E  KTVQV
Sbjct: 62  EDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 115

[Close]

BLAST of ClCG11G002160 vs. NCBI nr
Match: XP_011650093.1 (E3 ubiquitin-protein ligase RNF115 [Cucumis sativus])

HSP 1 Score: 196.4 bits (498), Expect = 1.4e-46
Identity = 95/115 (82.61%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 9   ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTV-AVEDVCAVC 68
           ATSANYAAS IMDIESMFDLDTVLTGADDFYY   VVAPPPV+VA+LPTV A +DVCAVC
Sbjct: 2   ATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVC 61

Query: 69  MEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTVQV 123
           MEDFLP+EGGKQI CGHVYHQSC+SSWLS+ DSCPLCR HI+ GDK E  KTVQV
Sbjct: 62  MEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116

[Close]

BLAST of ClCG11G002160 vs. NCBI nr
Match: KAE8651508.1 (hypothetical protein Csa_019333 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 5.9e-45
Identity = 92/112 (82.14%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 9   ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTV-AVEDVCAVC 68
           ATSANYAAS IMDIESMFDLDTVLTGADDFYY   VVAPPPV+VA+LPTV A +DVCAVC
Sbjct: 2   ATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVC 61

Query: 69  MEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKT 120
           MEDFLP+EGGKQI CGHVYHQSC+SSWLS+ DSCPLCR HI+ GDK E  KT
Sbjct: 62  MEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKT 113

[Close]

BLAST of ClCG11G002160 vs. NCBI nr
Match: XP_023537996.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 176.4 bits (446), Expect = 1.5e-40
Identity = 86/122 (70.49%), Postives = 99/122 (81.15%), Query Frame = 0


Query: 1   MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAV 60
           MA VLP  AT + +AAS IMD+ESMFDLDTVLTGADD+Y ++ +  PP VVVADLPTV  
Sbjct: 1   MAAVLP-EATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQIITEPPSVVVADLPTVVT 60

Query: 61  EDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTV 120
           +DVCAVCME+F  +EGGKQI CGHVYHQ+CISSWLSVGD CPLCR H+SS +K E  K V
Sbjct: 61  DDVCAVCMEEFRADEGGKQIPCGHVYHQTCISSWLSVGDCCPLCRCHVSSDNKSETAKPV 120

Query: 121 QV 123
           QV
Sbjct: 121 QV 121

[Close]

BLAST of ClCG11G002160 vs. ExPASy Swiss-Prot
Match: Q91YL2 (E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.4e-10
Identity = 35/100 (35.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 28  LDTVLTGADDFYYNENVVAPPPV---VVADLPTVAVED-------VCAVCMEDFLPNEGG 87
           LDT++T   + + N     PPP     +  LPTV V +        C VC ED+   E  
Sbjct: 188 LDTIITQLLNQFEN---TGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKEDYALGESV 247

Query: 88  KQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAP 118
           +Q+ C H++H SCI  WL   DSCP+CR+ ++  +    P
Sbjct: 248 RQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTATNP 284

[Close]

BLAST of ClCG11G002160 vs. ExPASy Swiss-Prot
Match: Q9Y4L5 (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09
Identity = 31/85 (36.47%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 47  PPPV---VVADLPTVAV--EDV-----CAVCMEDFLPNEGGKQIACGHVYHQSCISSWLS 106
           PPP     +  LPTV V  E V     C VC ED+   E  +Q+ C H +H SCI  WL 
Sbjct: 201 PPPADKEKITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLE 260

Query: 107 VGDSCPLCRRHISSGDKREAPKTVQ 122
           + D+CP+CR+ ++  D     ++ +
Sbjct: 261 LHDTCPVCRKSLNGEDSTRQSQSTE 285

[Close]

BLAST of ClCG11G002160 vs. ExPASy Swiss-Prot
Match: Q6IRP0 (E3 ubiquitin-protein ligase RNF126-B OS=Xenopus laevis OX=8355 GN=rnf126-b PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-09
Identity = 32/100 (32.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 28  LDTVLTGADDFYYNENVVAPPPV---VVADLPTVAVED-------VCAVCMEDFLPNEGG 87
           LDT++T   + + N     PPP     +  LPT+ + +        C VC ED+   E  
Sbjct: 185 LDTIITQLLNQFEN---TGPPPADTDKIQALPTIQITEEHVGFGLECPVCKEDYTVGESV 244

Query: 88  KQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAP 118
           +Q+ C H++H  CI  WL   D+CP+CR+ +S  +    P
Sbjct: 245 RQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTATNP 281

[Close]

BLAST of ClCG11G002160 vs. ExPASy Swiss-Prot
Match: Q9D0C1 (E3 ubiquitin-protein ligase RNF115 OS=Mus musculus OX=10090 GN=Rnf115 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-09
Identity = 31/76 (40.79%), Postives = 42/76 (55.26%), Query Frame = 0


Query: 47  PPPV---VVADLPTVAV--EDV-----CAVCMEDFLPNEGGKQIACGHVYHQSCISSWLS 106
           PPP     +  LPTV V  E V     C VC ED+   E  +Q+ C H +H SCI  WL 
Sbjct: 202 PPPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKVRQLPCNHFFHSSCIVPWLE 261

Query: 107 VGDSCPLCRRHISSGD 113
           + D+CP+CR+ ++  D
Sbjct: 262 LHDTCPVCRKSLNGED 277

[Close]

BLAST of ClCG11G002160 vs. ExPASy Swiss-Prot
Match: Q6DIP3 (E3 ubiquitin-protein ligase RNF126 OS=Xenopus tropicalis OX=8364 GN=rnf126 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.4e-09
Identity = 32/100 (32.00%), Postives = 50/100 (50.00%), Query Frame = 0


Query: 28  LDTVLTGADDFYYNENVVAPPPV---VVADLPTVAVED-------VCAVCMEDFLPNEGG 87
           LDT++T   + + N     PPP     +  LPT+ + +        C VC ED+   E  
Sbjct: 184 LDTIITQLLNQFEN---TGPPPADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESV 243

Query: 88  KQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAP 118
           +Q+ C H++H  CI  WL   D+CP+CR+ +S  +    P
Sbjct: 244 RQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTATNP 280

[Close]

BLAST of ClCG11G002160 vs. ExPASy TrEMBL
Match: A0A5A7V793 (RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold41G00900 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 9.4e-49
Identity = 96/114 (84.21%), Postives = 101/114 (88.60%), Query Frame = 0


Query: 9   ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAVEDVCAVCM 68
           ATSAN+AA  IMDIESMFDLDTVL+GADDFYY    VAPPPVVVADLPTVA +D CAVCM
Sbjct: 2   ATSANHAARYIMDIESMFDLDTVLSGADDFYYFHTAVAPPPVVVADLPTVATDDACAVCM 61

Query: 69  EDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTVQV 123
           EDFLP+EGGKQI CGHVYHQSCISSWLSVGDSCPLCRRHI+ GDK E  KTVQV
Sbjct: 62  EDFLPDEGGKQIPCGHVYHQSCISSWLSVGDSCPLCRRHIAPGDKTETSKTVQV 115

[Close]

BLAST of ClCG11G002160 vs. ExPASy TrEMBL
Match: A0A0A0LEZ1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000920 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 6.8e-47
Identity = 95/115 (82.61%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 9   ATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTV-AVEDVCAVC 68
           ATSANYAAS IMDIESMFDLDTVLTGADDFYY   VVAPPPV+VA+LPTV A +DVCAVC
Sbjct: 2   ATSANYAASYIMDIESMFDLDTVLTGADDFYYFHTVVAPPPVMVAELPTVAAADDVCAVC 61

Query: 69  MEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTVQV 123
           MEDFLP+EGGKQI CGHVYHQSC+SSWLS+ DSCPLCR HI+ GDK E  KTVQV
Sbjct: 62  MEDFLPDEGGKQIPCGHVYHQSCLSSWLSIRDSCPLCRCHIAPGDKTETSKTVQV 116

[Close]

BLAST of ClCG11G002160 vs. ExPASy TrEMBL
Match: A0A6J1HNM2 (E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita maxima OX=3661 GN=LOC111465331 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 6.1e-40
Identity = 86/123 (69.92%), Postives = 100/123 (81.30%), Query Frame = 0


Query: 1   MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVA-PPPVVVADLPTVA 60
           MA VLP  AT + +AAS IMD+ESMFDLDTVLTGADD+Y ++ ++  PP VVV+DLPTV 
Sbjct: 1   MAAVLP-EATRSAFAASYIMDLESMFDLDTVLTGADDYYNDQMIITEPPSVVVSDLPTVV 60

Query: 61  VEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKT 120
            +DVCAVCME+F  +EGGKQI CGHVYHQSCISSWLSVGD CPLCR H+SS +K E  K 
Sbjct: 61  TDDVCAVCMEEFRADEGGKQIPCGHVYHQSCISSWLSVGDCCPLCRCHVSSDNKLETTKP 120

Query: 121 VQV 123
           VQV
Sbjct: 121 VQV 122

[Close]

BLAST of ClCG11G002160 vs. ExPASy TrEMBL
Match: A0A6J1FDN7 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC111444430 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 6.8e-39
Identity = 85/123 (69.11%), Postives = 98/123 (79.67%), Query Frame = 0


Query: 1   MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAV 60
           MA VLP  AT + +AA  IMD+ESMFDLDTVLTGADD+Y ++ +  PP VVVADLPTV  
Sbjct: 1   MAAVLP-EATRSAFAARYIMDLESMFDLDTVLTGADDYYNDQIITEPPSVVVADLPTVVT 60

Query: 61  EDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSV-GDSCPLCRRHISSGDKREAPKT 120
           +DVCAVCME+F  +EGGKQI CGHVYHQ+CISSWLSV GD CPLCR H+SS +K E  K 
Sbjct: 61  DDVCAVCMEEFRADEGGKQIPCGHVYHQTCISSWLSVGGDCCPLCRCHVSSDNKSETAKP 120

Query: 121 VQV 123
           VQV
Sbjct: 121 VQV 122

[Close]

BLAST of ClCG11G002160 vs. ExPASy TrEMBL
Match: A0A6J1G511 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC111450796 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 6.8e-23
Identity = 66/122 (54.10%), Postives = 83/122 (68.03%), Query Frame = 0


Query: 1   MATVLPVTATSANYAASNIMDIESMFDLDTVLTGADDFYYNENVVAPPPVVVADLPTVAV 60
           MA V     T+ N AA+    IE +FDLD VL+GADDF   +  ++    +VADLPTV V
Sbjct: 1   MAAVSVSAETTRNLAAA--YPIEFLFDLDMVLSGADDFGCCQ--ISASDSLVADLPTV-V 60

Query: 61  EDVCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGDKREAPKTV 120
            DVCAVC+EDF P+E GKQI CGHVYH+SCISSWL+V + CPLCR  I +G   E+P + 
Sbjct: 61  ADVCAVCLEDFRPDEDGKQIPCGHVYHESCISSWLAVANCCPLCRCLI-AGQPPESPSST 116

Query: 121 QV 123
            +
Sbjct: 121 LI 116

[Close]

BLAST of ClCG11G002160 vs. TAIR 10
Match: AT1G68180.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.8 bits (164), Expect = 7.0e-12
Identity = 31/78 (39.74%), Postives = 46/78 (58.97%), Query Frame = 0


Query: 45  VAPPP-----------VVVADLPTVAVEDVCAVCMEDFLPNEGGKQIACGHVYHQSCISS 104
           + PPP           V++ D   V  E VCA+C E+F   E GK++ C H+YH SCI S
Sbjct: 109 IGPPPASQSAIEAVRTVIITDEDLVK-EKVCAICKEEFEVGEEGKELKCLHLYHSSCIVS 168

Query: 105 WLSVGDSCPLCRRHISSG 112
           WL++ ++CP+CR  ++ G
Sbjct: 169 WLNIHNTCPICRFEVNLG 185

[Close]

BLAST of ClCG11G002160 vs. TAIR 10
Match: AT3G60080.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-10
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 63  VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCR 106
           +CAVC EDF+  E  +++ C H+YH  CI  WLS  +SCPLCR
Sbjct: 168 LCAVCKEDFIIGESARRLPCSHIYHSDCIVPWLSDHNSCPLCR 210

[Close]

BLAST of ClCG11G002160 vs. TAIR 10
Match: AT5G64920.1 (COP1-interacting protein 8 )

HSP 1 Score: 61.2 bits (147), Expect = 6.5e-10
Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 0


Query: 63  VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHISSGD 113
           VCAVC +  +  E GK++ CGH YH  CI  WL   +SCP+CR  + + D
Sbjct: 256 VCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDD 305

[Close]

BLAST of ClCG11G002160 vs. TAIR 10
Match: AT2G44330.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 8.5e-10
Identity = 21/42 (50.00%), Postives = 29/42 (69.05%), Query Frame = 0


Query: 64  CAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCR 106
           CA+C EDF+  E  +++ C H+YH  CI  WL+  +SCPLCR
Sbjct: 96  CAICREDFVVGESARRLPCNHLYHNDCIIPWLTSHNSCPLCR 137

[Close]

BLAST of ClCG11G002160 vs. TAIR 10
Match: AT3G30460.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 8.5e-10
Identity = 22/46 (47.83%), Postives = 32/46 (69.57%), Query Frame = 0


Query: 63  VCAVCMEDFLPNEGGKQIACGHVYHQSCISSWLSVGDSCPLCRRHI 109
           VCA+C E+   NE   ++ C H YH+ CIS+WLS  ++CPLCR ++
Sbjct: 96  VCAICREELAANERLSELPCRHYYHKECISNWLSNRNTCPLCRHNV 141

The following BLAST results are available for this feature:

BLAST of ClCG11G002160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877426.1	1.5e-48	83.61	E3 ubiquitin-protein ligase RNF126-like [Benincasa hispida]	[more]
KAA0061529.1	1.9e-48	84.21	RING-H2 finger protein ATL5-like [Cucumis melo var. makuwa]	[more]
XP_011650093.1	1.4e-46	82.61	E3 ubiquitin-protein ligase RNF115 [Cucumis sativus]	[more]
KAE8651508.1	5.9e-45	82.14	hypothetical protein Csa_019333 [Cucumis sativus]	[more]
XP_023537996.1	1.5e-40	70.49	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of ClCG11G002160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q91YL2	6.4e-10	35.00	E3 ubiquitin-protein ligase RNF126 OS=Mus musculus OX=10090 GN=Rnf126 PE=1 SV=1	[more]
Q9Y4L5	1.8e-09	36.47	E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2	[more]
Q6IRP0	2.4e-09	32.00	E3 ubiquitin-protein ligase RNF126-B OS=Xenopus laevis OX=8355 GN=rnf126-b PE=2 ...	[more]
Q9D0C1	2.4e-09	40.79	E3 ubiquitin-protein ligase RNF115 OS=Mus musculus OX=10090 GN=Rnf115 PE=1 SV=1	[more]
Q6DIP3	2.4e-09	32.00	E3 ubiquitin-protein ligase RNF126 OS=Xenopus tropicalis OX=8364 GN=rnf126 PE=2 ...	[more]

BLAST of ClCG11G002160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V793	9.4e-49	84.21	RING-H2 finger protein ATL5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A0A0LEZ1	6.8e-47	82.61	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000920 P...	[more]
A0A6J1HNM2	6.1e-40	69.92	E3 ubiquitin-protein ligase RNF181-like OS=Cucurbita maxima OX=3661 GN=LOC111465...	[more]
A0A6J1FDN7	6.8e-39	69.11	E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1G511	6.8e-23	54.10	E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]

BLAST of ClCG11G002160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68180.1	7.0e-12	39.74	RING/U-box superfamily protein	[more]
AT3G60080.1	2.2e-10	53.49	RING/U-box superfamily protein	[more]
AT5G64920.1	6.5e-10	46.00	COP1-interacting protein 8	[more]
AT2G44330.1	8.5e-10	50.00	RING/U-box superfamily protein	[more]
AT3G30460.1	8.5e-10	47.83	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 64..104 e-value: 2.7E-7 score: 40.3
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 63..105 e-value: 1.7E-11 score: 44.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 64..105 score: 12.592549
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 56..121 e-value: 3.1E-18 score: 66.7
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 22..109
None	No IPR available	PANTHER	PTHR15710:SF74	E3 UBIQUITIN-PROTEIN LIGASE RING1-LIKE	coord: 22..109
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 58..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG11G002160.1	ClCG11G002160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding