ClCG11G001980 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAAATTTTGGGTTTGTTCGGATAAAAAGCTTCTTCCTTCATTGACTATTCAGTTTCCATATAATTCGCATTCTTCGGATGATTCCATTTCATCCCACCTTTCTCTCCGATCGACTCATACTTGACAGATTCTCTCACTCTCCATCTCTCTAAATTCATCCTTTCCTTAACATCTGCTGTTCTCTTTCAATTTCTTCCGCTTTTCAATCCATAACCCTTTTCCTCCAATCTTTCATCACTTCCGATTATCACCTCTTCATCTAATTATCTTACTCCTTCCCCCTCTTTGACTCTCATTTTTCCTTAATTTGCGCTTTGATTTCCTCCCAGCTGCCTGGAATTTGGATTTTCTGATCTGGGGTTTCAATTTTTTCATCTGGGTATTGGAATTTGTTTCTGGGATTTGTGGGATGAAGATCATCGAATTGGAAGATGCTGGAAATGATCGGGAAAATGAAATCGGTAGTGGTCAGATTGTGAAGGTCGATGCCAAAAGAGCGTTGGTTGGGGCTGGGGCTCGAATCCTGTTTTACCCTACCCTTTTGTATAACGTGCTTCGGAACAAAATGGAAGCTGAATTCAGGTGGTGGGATGAAGTTGATCAGGTTGGTTCCTTGGTTGATTGGTTTTGTGCGTTTTAATTTTGTTCCATTCTGATCGAACTGCTTAATGATTTGTTTTCATCGGAATTGAAATGTGTCCCTAGATTATCTTCTTGCTTGTATTAACCTTCTTATTCTGTCTTTGAAGTTTGAAGGTGTTTTGACCTGTTTGACTTTTGAGGTTGGGATAATTTTCATGACAAGAAAATTTTGTTATCTGTTCAACTTTATTAGTTAAACTTCGTATGTGTATTGGATTTGATAGTCAAAATCTGATGAATTTGATGATCAGGATATATAAAACTGTGGATTTCTAGAAACTAAATGGATTTTTTTGTTTGTGTTTATGTAATTTTTGTTTCAGATTTGTCTCTGCACTATACTGATCAATAATCTTCTATTGTGGTTTCTGTTATTAATGTCAACAACTTTGTTTTATCTTCCCAGTTTCTTTTGCTGGGTGCAGTGCCCTTCCCCAAAGACGTCCCAAGATTGAAGAAGCTTGGTGTTGGCGGTGTTATCACTCTCAATGAACCTTATGAAACACTAGTTCCATCGTCTTTGTATTTTGTGAGTCATGTTCTTTATTTGCAGTTGTTCTCGTATATTTTCTTGTACTCAGCTCGAAAAATTGTGTTGTTCACTGGATTGCAACTGGATCCTATTGCCTGATTCAATTGAAGAGAGCTGAGTTTTCTTGTTTTGAATAGCCTGAGGACTTTGAAAGAAAGCTTAATATCCATTTTTTCTTTCTGTCATCGAACTTGTCCCTTTCCTATGAGATTGACTATTGAATGTTTTACTAAAATTGGCTGACTGTTGAATGTTCTGCAGCGCCATGGAATCGACCACTTAAAGATCCCAACGAGAGATTATTGTTTTGCTCCTAAATTTTCTGATATTAGCCGAGCTGTGGACTTCATTCACAGTGAGTTATATTCTTAGCTGTAGCTATTTTGGTAGCTTCGTTTCTTCCTCTGTTTCTTCCCATATGTGTGCTATGATTTTATACATTTTTGGTTTTATCTTTCAGGAAATGCATCATCTGGTAAAACAACATATGTCCATTGTAAAGCAGGACGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTAATATTATGTACCTTTCTTTGCAGAAACTTTGTACTATTGTGAGATGTATGAAGAAGAAATAATCTTTTGAAATATATAGCATTTTGATCTTGCACAAAGAGTCGAGATTGTGTTGATTTGCTTTCTTTAATTTTCAGGTCAAATATAAGCACATGACCCCATCTGCTGCACTGGAATATGTCCGCTCTAGAAGGCCACGTGTGTTACTTGCCCCCTCACAGTGGGAGGTAAAAGAATTTACTCTCAAACATCAAATCTTTTAGATCAGAAGCTTGCGGAAATCACATAGTTCTTAGTTCAACTGCTGTTGTCTCTCACTTATGTTGCTTTCATAACTATAGATTGGGCAAATTCAATTGCCAAGTGGTTGGGTTGTGTGACAAGCTTTTGGGATTACTTTTGTTTTAGTTAATCACCTATGATTTTTAATTTATTGTCATTCGGGGTTTCCTTTTTTGGTTATCCTTATGATCTTTTATAACACAGGCTGTTCAAGAATACAGCAACCGTGGACCGGTCACAAGTTCTAGTTCACCCTCAGGAGGAGATGCAGTCCTCATTACAAAAGACGATCTAGAAGGATATCATGGTACATGCATTGACAGTGCGGGTAGAGAACTTGCAGTAGTCCCTCGGATGAGCAAGTCAAAGCCGATGATAGCAAGGTTGTCCTGCCTCTTTTCCTCTTTGATAATTCATGGCAGTACTGGATCTCTCATTAAGCGTCTGCCAGCACCGGAGGCTCGTGCTTGTTGATGATAACCATAGCAACCCCCTCTTGTATAGATGTCATGGAAGTAAGAATCAAACTCTTTTTTAGAGTGGAGAAGTGAATGGAAAAGGCTCGAGCAATGTCGTTCGTCTGAAGCTCGTAGAACACTAAACAGTGATTAGGTTGTACGTAACTGGTACATCAAAATTTTCCCTTCCCTTGAATTATCTTCTGAAGAAAACCTTGTGGTTTGTGCTGATGGAAAATATTAAGCCTGTTGGCTCCAGAGTCAAAAAGGTAGCGACCTTACTTGAACAGATCGGTGGTATATAACTTGTATATAACTGTGTCGTGCCCTTTGGTTCTATGGTTGCTGGTAGCAGCAGCAAAACCAAGCAGCCATGTAAACTAGAGATATCGATTACCACTTAAAAACTTTTGCCATAGGTTGAATATTTGAACTGCCAAACCAAACCTCTAAGGAGAATGTAACTTATTTAAATACTTCCTTGCATCTATTTTTTTGCAGAACAACTCGATGGTTGATCACAGTTTGTCGGTGGCAAACTTGCTCAAATC AGAAAATTTTGGGTTTGTTCGGATAAAAAGCTTCTTCCTTCATTGACTATTCAGTTTCCATATAATTCGCATTCTTCGGATGATTCCATTTCATCCCACCTTTCTCTCCGATCGACTCATACTTGACAGATTCTCTCACTCTCCATCTCTCTAAATTCATCCTTTCCTTAACATCTGCTGTTCTCTTTCAATTTCTTCCGCTTTTCAATCCATAACCCTTTTCCTCCAATCTTTCATCACTTCCGATTATCACCTCTTCATCTAATTATCTTACTCCTTCCCCCTCTTTGACTCTCATTTTTCCTTAATTTGCGCTTTGATTTCCTCCCAGCTGCCTGGAATTTGGATTTTCTGATCTGGGGTTTCAATTTTTTCATCTGGGTATTGGAATTTGTTTCTGGGATTTGTGGGATGAAGATCATCGAATTGGAAGATGCTGGAAATGATCGGGAAAATGAAATCGGTAGTGGTCAGATTGTGAAGGTCGATGCCAAAAGAGCGTTGGTTGGGGCTGGGGCTCGAATCCTGTTTTACCCTACCCTTTTGTATAACGTGCTTCGGAACAAAATGGAAGCTGAATTCAGGTGGTGGGATGAAGTTGATCAGTTTCTTTTGCTGGGTGCAGTGCCCTTCCCCAAAGACGTCCCAAGATTGAAGAAGCTTGGTGTTGGCGGTGTTATCACTCTCAATGAACCTTATGAAACACTAGTTCCATCGTCTTTGTATTTTGTGAGTCATCGCCATGGAATCGACCACTTAAAGATCCCAACGAGAGATTATTGTTTTGCTCCTAAATTTTCTGATATTAGCCGAGCTGTGGACTTCATTCACAGAAATGCATCATCTGGTAAAACAACATATGTCCATTGTAAAGCAGGACGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCATCTGCTGCACTGGAATATGTCCGCTCTAGAAGGCCACGTGTGTTACTTGCCCCCTCACAGTGGGAGGCTGTTCAAGAATACAGCAACCGTGGACCGGTCACAAGTTCTAGTTCACCCTCAGGAGGAGATGCAGTCCTCATTACAAAAGACGATCTAGAAGGATATCATGGTACATGCATTGACAGTGCGGGTAGAGAACTTGCAGTAGTCCCTCGGATGAGCAAGTCAAAGCCGATGATAGCAAGGTTGTCCTGCCTCTTTTCCTCTTTGATAATTCATGGCAGTACTGGATCTCTCATTAAGCGTCTGCCAGCACCGGAGGCTCGTGCTTGTTGATGATAACCATAGCAACCCCCTCTTGTATAGATGTCATGGAAGTAAGAATCAAACTCTTTTTTAGAGTGGAGAAGTGAATGGAAAAGGCTCGAGCAATGTCGTTCGTCTGAAGCTCGTAGAACACTAAACAGTGATTAGGTTGTACGTAACTGGTACATCAAAATTTTCCCTTCCCTTGAATTATCTTCTGAAGAAAACCTTGTGGTTTGTGCTGATGGAAAATATTAAGCCTGTTGGCTCCAGAGTCAAAAAGGTAGCGACCTTACTTGAACAGATCGGTGGTATATAACTTGTATATAACTGTGTCGTGCCCTTTGGTTCTATGGTTGCTGGTAGCAGCAGCAAAACCAAGCAGCCATGTAAACTAGAGATATCGATTACCACTTAAAAACTTTTGCCATAGGTTGAATATTTGAACTGCCAAACCAAACCTCTAAGGAGAATGTAACTTATTTAAATACTTCCTTGCATCTATTTTTTTGCAGAACAACTCGATGGTTGATCACAGTTTGTCGGTGGCAAACTTGCTCAAATC ATGAAGATCATCGAATTGGAAGATGCTGGAAATGATCGGGAAAATGAAATCGGTAGTGGTCAGATTGTGAAGGTCGATGCCAAAAGAGCGTTGGTTGGGGCTGGGGCTCGAATCCTGTTTTACCCTACCCTTTTGTATAACGTGCTTCGGAACAAAATGGAAGCTGAATTCAGGTGGTGGGATGAAGTTGATCAGTTTCTTTTGCTGGGTGCAGTGCCCTTCCCCAAAGACGTCCCAAGATTGAAGAAGCTTGGTGTTGGCGGTGTTATCACTCTCAATGAACCTTATGAAACACTAGTTCCATCGTCTTTGTATTTTGTGAGTCATCGCCATGGAATCGACCACTTAAAGATCCCAACGAGAGATTATTGTTTTGCTCCTAAATTTTCTGATATTAGCCGAGCTGTGGACTTCATTCACAGAAATGCATCATCTGGTAAAACAACATATGTCCATTGTAAAGCAGGACGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCATCTGCTGCACTGGAATATGTCCGCTCTAGAAGGCCACGTGTGTTACTTGCCCCCTCACAGTGGGAGGCTGTTCAAGAATACAGCAACCGTGGACCGGTCACAAGTTCTAGTTCACCCTCAGGAGGAGATGCAGTCCTCATTACAAAAGACGATCTAGAAGGATATCATGGTACATGCATTGACAGTGCGGGTAGAGAACTTGCAGTAGTCCCTCGGATGAGCAAGTCAAAGCCGATGATAGCAAGGTTGTCCTGCCTCTTTTCCTCTTTGATAATTCATGGCAGTACTGGATCTCTCATTAAGCGTCTGCCAGCACCGGAGGCTCGTGCTTGTTGA MKIIELEDAGNDRENEIGSGQIVKVDAKRALVGAGARILFYPTLLYNVLRNKMEAEFRWWDEVDQFLLLGAVPFPKDVPRLKKLGVGGVITLNEPYETLVPSSLYFVSHRHGIDHLKIPTRDYCFAPKFSDISRAVDFIHRNASSGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALEYVRSRRPRVLLAPSQWEAVQEYSNRGPVTSSSSPSGGDAVLITKDDLEGYHGTCIDSAGRELAVVPRMSKSKPMIARLSCLFSSLIIHGSTGSLIKRLPAPEARAC Homology
BLAST of ClCG11G001980 vs. NCBI nr
Match: XP_038890989.1 (phosphatidylglycerophosphate phosphatase PTPMT1-like [Benincasa hispida]) HSP 1 Score: 559.3 bits (1440), Expect = 1.9e-155 Identity = 275/287 (95.82%), Postives = 280/287 (97.56%), Query Frame = 0
BLAST of ClCG11G001980 vs. NCBI nr
Match: KAA0061514.1 (putative dual specificity protein phosphatase DSP8 [Cucumis melo var. makuwa] >TYK10759.1 putative dual specificity protein phosphatase DSP8 [Cucumis melo var. makuwa]) HSP 1 Score: 557.8 bits (1436), Expect = 5.6e-155 Identity = 277/288 (96.18%), Postives = 281/288 (97.57%), Query Frame = 0
BLAST of ClCG11G001980 vs. NCBI nr
Match: XP_008459068.1 (PREDICTED: putative dual specificity protein phosphatase DSP8 [Cucumis melo]) HSP 1 Score: 555.1 bits (1429), Expect = 3.6e-154 Identity = 276/288 (95.83%), Postives = 280/288 (97.22%), Query Frame = 0
BLAST of ClCG11G001980 vs. NCBI nr
Match: XP_004141033.1 (putative dual specificity protein phosphatase DSP8 [Cucumis sativus] >KGN60562.1 hypothetical protein Csa_019500 [Cucumis sativus]) HSP 1 Score: 547.7 bits (1410), Expect = 5.8e-152 Identity = 272/288 (94.44%), Postives = 279/288 (96.88%), Query Frame = 0
BLAST of ClCG11G001980 vs. NCBI nr
Match: XP_023521512.1 (putative dual specificity protein phosphatase DSP8 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 545.0 bits (1403), Expect = 3.8e-151 Identity = 267/287 (93.03%), Postives = 277/287 (96.52%), Query Frame = 0
BLAST of ClCG11G001980 vs. ExPASy Swiss-Prot
Match: Q9ZQP1 (Phosphatidylglycerophosphate phosphatase PTPMT1 OS=Arabidopsis thaliana OX=3702 GN=PTPMT1 PE=1 SV=2) HSP 1 Score: 288.5 bits (737), Expect = 8.3e-77 Identity = 156/292 (53.42%), Postives = 196/292 (67.12%), Query Frame = 0
BLAST of ClCG11G001980 vs. ExPASy Swiss-Prot
Match: Q6NKR2 (Phosphatidylglycerophosphate phosphatase PTPMT2 OS=Arabidopsis thaliana OX=3702 GN=PTPMT2 PE=1 SV=1) HSP 1 Score: 268.9 bits (686), Expect = 6.8e-71 Identity = 132/197 (67.01%), Postives = 164/197 (83.25%), Query Frame = 0
BLAST of ClCG11G001980 vs. ExPASy Swiss-Prot
Match: Q86BN8 (Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Drosophila melanogaster OX=7227 GN=PTPMT1 PE=2 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 6.7e-26 Identity = 68/193 (35.23%), Postives = 103/193 (53.37%), Query Frame = 0
BLAST of ClCG11G001980 vs. ExPASy Swiss-Prot
Match: Q66GT5 (Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Mus musculus OX=10090 GN=Ptpmt1 PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 6.7e-26 Identity = 67/181 (37.02%), Postives = 101/181 (55.80%), Query Frame = 0
BLAST of ClCG11G001980 vs. ExPASy Swiss-Prot
Match: P0C089 (Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ptpmt1 PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 6.7e-26 Identity = 69/181 (38.12%), Postives = 100/181 (55.25%), Query Frame = 0
BLAST of ClCG11G001980 vs. ExPASy TrEMBL
Match: A0A5D3CKK3 (Putative dual specificity protein phosphatase DSP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00720 PE=3 SV=1) HSP 1 Score: 557.8 bits (1436), Expect = 2.7e-155 Identity = 277/288 (96.18%), Postives = 281/288 (97.57%), Query Frame = 0
BLAST of ClCG11G001980 vs. ExPASy TrEMBL
Match: A0A1S3CAJ4 (putative dual specificity protein phosphatase DSP8 OS=Cucumis melo OX=3656 GN=LOC103498285 PE=3 SV=1) HSP 1 Score: 555.1 bits (1429), Expect = 1.8e-154 Identity = 276/288 (95.83%), Postives = 280/288 (97.22%), Query Frame = 0
BLAST of ClCG11G001980 vs. ExPASy TrEMBL
Match: A0A0A0LIP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000700 PE=3 SV=1) HSP 1 Score: 547.7 bits (1410), Expect = 2.8e-152 Identity = 272/288 (94.44%), Postives = 279/288 (96.88%), Query Frame = 0
BLAST of ClCG11G001980 vs. ExPASy TrEMBL
Match: A0A6J1FG65 (putative dual specificity protein phosphatase DSP8 OS=Cucurbita moschata OX=3662 GN=LOC111443887 PE=3 SV=1) HSP 1 Score: 540.4 bits (1391), Expect = 4.5e-150 Identity = 265/287 (92.33%), Postives = 273/287 (95.12%), Query Frame = 0
BLAST of ClCG11G001980 vs. ExPASy TrEMBL
Match: A0A6J1KJX2 (putative dual specificity protein phosphatase DSP8 OS=Cucurbita maxima OX=3661 GN=LOC111493853 PE=3 SV=1) HSP 1 Score: 538.9 bits (1387), Expect = 1.3e-149 Identity = 265/287 (92.33%), Postives = 274/287 (95.47%), Query Frame = 0
BLAST of ClCG11G001980 vs. TAIR 10
Match: AT2G35680.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 288.5 bits (737), Expect = 5.9e-78 Identity = 156/292 (53.42%), Postives = 196/292 (67.12%), Query Frame = 0
BLAST of ClCG11G001980 vs. TAIR 10
Match: AT5G56610.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 268.9 bits (686), Expect = 4.8e-72 Identity = 132/197 (67.01%), Postives = 164/197 (83.25%), Query Frame = 0
BLAST of ClCG11G001980 vs. TAIR 10
Match: AT5G56610.2 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 179.5 bits (454), Expect = 3.9e-45 Identity = 98/197 (49.75%), Postives = 126/197 (63.96%), Query Frame = 0
BLAST of ClCG11G001980 vs. TAIR 10
Match: AT3G23610.1 (dual specificity protein phosphatase 1 ) HSP 1 Score: 55.5 bits (132), Expect = 8.4e-08 Identity = 38/126 (30.16%), Postives = 57/126 (45.24%), Query Frame = 0
BLAST of ClCG11G001980 vs. TAIR 10
Match: AT3G23610.2 (dual specificity protein phosphatase 1 ) HSP 1 Score: 55.5 bits (132), Expect = 8.4e-08 Identity = 38/126 (30.16%), Postives = 57/126 (45.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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