ClCG11G000910 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAGACCTCCAATCCGATACACTTATAGGAGGAGGAGTAGAAAAGGGAAATCACAAGAAAAGAAATCAGGAAGGGAGGAAGCATGAGTATTCGGTTAGAGGATGAGGGGACCGCAAAATATTAGCTTAAAAGAGGAAATGGACGTGAGCAGGAGGTGGGAAGAATCAGATAATACGGAAGAGGCCCGTTTTGGGAAAGAGGAGAAAATTTTCAACTCTCGAATGTGTTGGCTTATCATTTATTTTCTGTCCTTTATTGTTATTGTCCTAGTTACCATTTCTCAGCATTTGTTTCTTTTATGGGATTGCTAAACTTGGGAATTGATGTATCCTAAATAATTTCTTGATTTATCCCTATTACTCTGTTATCGTATATATTCTATCCTTTATTGTTATTGTTCTAGTACCCATTTCTCAGTATTTGTTTCTTTTATGGGATTGCTAAACATGGGAATTGACTTATCCTAAATAATAATTCCTTGATTTACCCCAATTACTCTGTTATCGTATATATTCTGAATCACTTGTTGGGTTTTTCTGCGTGTAGGGGAGCAGATATCTAACAAATTGTATCAGAGCTACAGAATCTTGGGGCGAACACGAAAAATGGCAGAAAAACAATTAGAAGAGAAGATGGAAGCAAATGAGAAGGAAATGTCAAGTTTGAAAGAGATCTTGTACAGCCTCTGTAAAAATATCGAGAAGTTAACAAATGAGGTTTGGGAAAGTACTCTAAGTAGGAAGATAGGGGAACCGATGATGTCGGAAGGGTCGCAATAGAAAATGAAAGGGAAAATGGTTGAAAAAGCTAAGTCCGAATAGAATGAAAACACTGGGGGATCGAGTAAGAGCAAATACAAGAAACTGGAAATTCTCTCCTCTTTCCCAAAACGGGCCTTTTCCATACTATCTGATTCTTCCCACCTCCTGCTCACGTCCATTTCCTCTTTTAAGCTAATATTTTGTGGTTCCCTCATCCTCTAACCGAATATTCGTGCTTCATCCCTTCTTGATTCCTTTTCTCGTGATTTTTCTTTTCTACCCCTCCTCTTATAAGTGTATCGAATTGGAGGTCTAACAATACCCCCCTTCTCGAGTGGAATGGTGAAGCAGCAGAAGCTTTCGAGAGGTTGAAGGGAGCTATGATGTCAGTTCTAGTATTAGCTCTTCCAGACTTTTCACTGCCATTTGTGATTGAAACAGACGCTTCAGGGTTTGGACTAGGAGCGGTACTATCACAGAATTCTAAACCAATAGCCTATTTTAGCCAAGCCTTATCTTCACGAGCACAGGCGAAGTCTATATATGAAAGGGAGTTAATGGTTGTGGTTTTGGCAATCGAAAAATGGAGACACTATCTTTCGGGCAACAAGTTCATAGTTATTTCAAATCAAAAGGCCCTCAAGTTTCTGATTGAGCAAAGAGAGGTGCAACCTTAGTTTCAAAGGTTGTTGACTAAACTATTGGGGTATGATTTTGAAATATTGTATCAACCAAGACTTCAGAATAAGGTGGTTGATGCTTTATCTCGGATGACACCTACACTCGCAATCCACAGTCTGACCATTCCTTCTTTGCTTGATGTAAATGTGATCCTCAATGAAGTGGAGAAAGATGAAGAATTCCAGAAAATTATTGCAATACTCAAGGAGGATCCAGAGGGAAAACCTAAGTATCAATGGGTGCAAGGAAAATTGTTATATAAAGGAAGGTTAGTCTTATCTAGCTCTTCTTCACTTATTCCATCTATTTTACATACATATCACGATTCAATTGTGGGGGGACATTCAGGACATATAAAAGAATGACGGGAATTATTCTGGCATGGTATGAAATCGGATGTCAAAAAATAAGTTGAGAGTTGTGAAACTTGTCAACAGAATAAAATCGAATCGCTCCGGCCCGCGGGACTCCTGCAACCATTACCCATACTGAACCAAATTTGGGAAGAATTGACCATGGACTTCATAGAAAGGTTGCCAAAATCAGCTGGTTATGATTCAATAATACTACTTTTCATGCATCTATAGAAACAATGCTATATCAGATTGTTTATGGACAAACTCCCCCTCCAATCTTATCCTACAGGGAGAAGAAGACAACCAATGATGCAGTGGAACAATAATTGATGGCCAGAGATCTAGTGTTGAATGCCTTGAAAGAACACTTGAGGGTAGCTCAAAACTGAACGAAGAAACGAGCGGATCAGATGAGGCGGGAACTTGATTTTGAGGTAGGAGATGAGGTATTTTTGAAGTTGAGACCGTATAGGCAAAGATCACTGGCAAGGAAAAGATGTGAGAAACTCGCCCCAAAATTTTTTGGACCTTATCGAATTATGGAAAAAATTGGTGCAGTGGCATATAAATTGGACCTCCCACCCGAGGCAGCTATACATAATGTATTTCATGTGTCACAACTTAAAAAGAAGGTGGGACAAAGGATTCAAATTCAACACCAACCTCCGGTGTTAACTGAGGGGTTTGAGATGTAGGTGATTCCAGAAGAAATTATAGAGATCCATTAGAACAGTGAATTAGCAGCTACTAAATGGTTGGTTAAATGGAAGGGGATGATAGAAAGTGAAGCTACATGGGAGTTGGTGCATTTAATGAATCAGGAGTTTCCATCATTCCACCTTGAGGACAAGGTGCAATTCGAGAAAGGGGTATTGTTAGACCTTCAATTCGATACACTTATAAGAGGAGGGGTAGAAAAGGGATATCACAAGAAAAGGAATCAAGAAGGGAGGAAGCACGAGTATCCGGTTAGAGGATGA ATGTTAGACCTCCAATCCGATACACTTATAGGAGGAGGAGTAGAAAAGGGAAATCACAAGAAAAGAAATCAGGAAGGGAGGAAGCATGACTTAAAAGAGGAAATGGACGTGAGCAGGAGGTGGGAAGAATCAGATAATACGGAAGAGGCCCGTTTTGGGAAAGAGGAGAAAATTTTCAACTCTCGAATGTGGGAGCAGATATCTAACAAATTGTATCAGAGCTACAGAATCTTGGGGCGAACACGAAAAATGGCAGAAAAACAATTAGAAGAGAAGATGGAAGCAAATGAGAAGGAAATGTCAAGTTTGAAAGAGATCTTGTACAGCCTCTGTAAAAATATCGAGAAGTTAACAAATGAGGTTTGGGAAAGTACTCTAAGTAGGAAGATAGGGGAACCGATGATGTCGGAAGGGTCTAACAATACCCCCCTTCTCGAGTGGAATGGTGAAGCAGCAGAAGCTTTCGAGAGGTTGAAGGGAGCTATGATGTCAGTTCTAGTATTAGCTCTTCCAGACTTTTCACTGCCATTTGTGATTGAAACAGACGCTTCAGGGTTTGGACTAGGAGCGGTACTATCACAGAATTCTAAACCAATAGCCTATTTTAGCCAAGCCTTATCTTCACGAGCACAGGCGAAGTCTATATATGAAAGGGAGTTAATGGTTGTGGTTTTGGCAATCGAAAAATGGAGACACTATCTTTCGGGCAACAAGTTCATAGTTATTTCAAATCAAAAGGCCCTCAAGTTTCTGATTGAGCAAAGAGAGAATAAGGTGGTTGATGCTTTATCTCGGATGACACCTACACTCGCAATCCACAGTCTGACCATTCCTTCTTTGCTTGATGTAAATGTGATCCTCAATGAAGTGGAGAAAGATGAAGAATTCCAGAAAATTATTGCAATACTCAAGGAGGATCCAGAGGGAAAACCTAAGTATCAATGGAATAAAATCGAATCGCTCCGGCCCGCGGGACTCCTGCAACCATTACCCATACTGAACCAAATTTGGGAAGAATTGACCATGGACTTCATAGAAAGTGGAACAATAATTGATGGCCAGAGATCTAGTGTTGAATGCCTTGAAAGAACACTTGAGGCGGATCAGATGAGGCGGGAACTTGATTTTGAGGTAGGAGATGAGGTATTTTTGAAGTTGAGACCGTATAGGCAAAGATCACTGGCAAGGAAAAGATGTGAGAAACTCGCCCCAAAATTTTTTGGACCTTATCGAATTATGGAAAAAATTGGTGCAGTGGCATATAAATTGGACCTCCCACCCGAGGCAGCTATACATAATGTATTTCATGTGTCACAACTTAAAAAGAAGGTGGGACAAAGGATTCAAATTCAACACCAACCTCCGGTGTTAACTGAGGGGTTTGAGATTGAATTAGCAGCTACTAAATGGTTGGTTAAATGGAAGGGGATGATAGAAAGTGAAGCTACATGGGAGTTGGTGCATTTAATGAATCAGGAGTTTCCATCATTCCACCTTGAGGACAAGGTGCAATTCGAGAAAGGGGTATTGTTAGACCTTCAATTCGATACACTTATAAGAGGAGGGGTAGAAAAGGGATATCACAAGAAAAGGAATCAAGAAGGGAGGAAGCACGAGTATCCGGTTAGAGGATGA ATGTTAGACCTCCAATCCGATACACTTATAGGAGGAGGAGTAGAAAAGGGAAATCACAAGAAAAGAAATCAGGAAGGGAGGAAGCATGACTTAAAAGAGGAAATGGACGTGAGCAGGAGGTGGGAAGAATCAGATAATACGGAAGAGGCCCGTTTTGGGAAAGAGGAGAAAATTTTCAACTCTCGAATGTGGGAGCAGATATCTAACAAATTGTATCAGAGCTACAGAATCTTGGGGCGAACACGAAAAATGGCAGAAAAACAATTAGAAGAGAAGATGGAAGCAAATGAGAAGGAAATGTCAAGTTTGAAAGAGATCTTGTACAGCCTCTGTAAAAATATCGAGAAGTTAACAAATGAGGTTTGGGAAAGTACTCTAAGTAGGAAGATAGGGGAACCGATGATGTCGGAAGGGTCTAACAATACCCCCCTTCTCGAGTGGAATGGTGAAGCAGCAGAAGCTTTCGAGAGGTTGAAGGGAGCTATGATGTCAGTTCTAGTATTAGCTCTTCCAGACTTTTCACTGCCATTTGTGATTGAAACAGACGCTTCAGGGTTTGGACTAGGAGCGGTACTATCACAGAATTCTAAACCAATAGCCTATTTTAGCCAAGCCTTATCTTCACGAGCACAGGCGAAGTCTATATATGAAAGGGAGTTAATGGTTGTGGTTTTGGCAATCGAAAAATGGAGACACTATCTTTCGGGCAACAAGTTCATAGTTATTTCAAATCAAAAGGCCCTCAAGTTTCTGATTGAGCAAAGAGAGAATAAGGTGGTTGATGCTTTATCTCGGATGACACCTACACTCGCAATCCACAGTCTGACCATTCCTTCTTTGCTTGATGTAAATGTGATCCTCAATGAAGTGGAGAAAGATGAAGAATTCCAGAAAATTATTGCAATACTCAAGGAGGATCCAGAGGGAAAACCTAAGTATCAATGGAATAAAATCGAATCGCTCCGGCCCGCGGGACTCCTGCAACCATTACCCATACTGAACCAAATTTGGGAAGAATTGACCATGGACTTCATAGAAAGTGGAACAATAATTGATGGCCAGAGATCTAGTGTTGAATGCCTTGAAAGAACACTTGAGGCGGATCAGATGAGGCGGGAACTTGATTTTGAGGTAGGAGATGAGGTATTTTTGAAGTTGAGACCGTATAGGCAAAGATCACTGGCAAGGAAAAGATGTGAGAAACTCGCCCCAAAATTTTTTGGACCTTATCGAATTATGGAAAAAATTGGTGCAGTGGCATATAAATTGGACCTCCCACCCGAGGCAGCTATACATAATGTATTTCATGTGTCACAACTTAAAAAGAAGGTGGGACAAAGGATTCAAATTCAACACCAACCTCCGGTGTTAACTGAGGGGTTTGAGATTGAATTAGCAGCTACTAAATGGTTGGTTAAATGGAAGGGGATGATAGAAAGTGAAGCTACATGGGAGTTGGTGCATTTAATGAATCAGGAGTTTCCATCATTCCACCTTGAGGACAAGGTGCAATTCGAGAAAGGGGTATTGTTAGACCTTCAATTCGATACACTTATAAGAGGAGGGGTAGAAAAGGGATATCACAAGAAAAGGAATCAAGAAGGGAGGAAGCACGAGTATCCGGTTAGAGGATGA MLDLQSDTLIGGGVEKGNHKKRNQEGRKHDLKEEMDVSRRWEESDNTEEARFGKEEKIFNSRMWEQISNKLYQSYRILGRTRKMAEKQLEEKMEANEKEMSSLKEILYSLCKNIEKLTNEVWESTLSRKIGEPMMSEGSNNTPLLEWNGEAAEAFERLKGAMMSVLVLALPDFSLPFVIETDASGFGLGAVLSQNSKPIAYFSQALSSRAQAKSIYERELMVVVLAIEKWRHYLSGNKFIVISNQKALKFLIEQRENKVVDALSRMTPTLAIHSLTIPSLLDVNVILNEVEKDEEFQKIIAILKEDPEGKPKYQWNKIESLRPAGLLQPLPILNQIWEELTMDFIESGTIIDGQRSSVECLERTLEADQMRRELDFEVGDEVFLKLRPYRQRSLARKRCEKLAPKFFGPYRIMEKIGAVAYKLDLPPEAAIHNVFHVSQLKKKVGQRIQIQHQPPVLTEGFEIELAATKWLVKWKGMIESEATWELVHLMNQEFPSFHLEDKVQFEKGVLLDLQFDTLIRGGVEKGYHKKRNQEGRKHEYPVRG Homology
BLAST of ClCG11G000910 vs. NCBI nr
Match: TYJ98047.1 (Transposon Tf2-6 polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 360.9 bits (925), Expect = 1.9e-95 Identity = 247/636 (38.84%), Postives = 288/636 (45.28%), Query Frame = 0
BLAST of ClCG11G000910 vs. NCBI nr
Match: KAA0066550.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 357.8 bits (917), Expect = 1.6e-94 Identity = 246/636 (38.68%), Postives = 287/636 (45.13%), Query Frame = 0
BLAST of ClCG11G000910 vs. NCBI nr
Match: KAA0066816.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 356.3 bits (913), Expect = 4.7e-94 Identity = 211/435 (48.51%), Postives = 267/435 (61.38%), Query Frame = 0
BLAST of ClCG11G000910 vs. NCBI nr
Match: KAA0061073.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 344.7 bits (883), Expect = 1.4e-90 Identity = 231/641 (36.04%), Postives = 295/641 (46.02%), Query Frame = 0
BLAST of ClCG11G000910 vs. NCBI nr
Match: KAA0055376.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 344.7 bits (883), Expect = 1.4e-90 Identity = 231/641 (36.04%), Postives = 295/641 (46.02%), Query Frame = 0
BLAST of ClCG11G000910 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 2.2e-17 Identity = 73/218 (33.49%), Postives = 107/218 (49.08%), Query Frame = 0
BLAST of ClCG11G000910 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 1.1e-13 Identity = 54/163 (33.13%), Postives = 80/163 (49.08%), Query Frame = 0
BLAST of ClCG11G000910 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.0e-11 Identity = 42/113 (37.17%), Postives = 67/113 (59.29%), Query Frame = 0
BLAST of ClCG11G000910 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.4e-11 Identity = 53/157 (33.76%), Postives = 75/157 (47.77%), Query Frame = 0
BLAST of ClCG11G000910 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.2e-09 Identity = 48/160 (30.00%), Postives = 85/160 (53.12%), Query Frame = 0
BLAST of ClCG11G000910 vs. ExPASy TrEMBL
Match: A0A5D3BFZ9 (Transposon Tf2-6 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold401G00130 PE=4 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 9.2e-96 Identity = 247/636 (38.84%), Postives = 288/636 (45.28%), Query Frame = 0
BLAST of ClCG11G000910 vs. ExPASy TrEMBL
Match: A0A5A7VHA7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold25G001140 PE=4 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 7.8e-95 Identity = 246/636 (38.68%), Postives = 287/636 (45.13%), Query Frame = 0
BLAST of ClCG11G000910 vs. ExPASy TrEMBL
Match: A0A5A7VK94 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G001740 PE=4 SV=1) HSP 1 Score: 356.3 bits (913), Expect = 2.3e-94 Identity = 211/435 (48.51%), Postives = 267/435 (61.38%), Query Frame = 0
BLAST of ClCG11G000910 vs. ExPASy TrEMBL
Match: A0A5A7UYM1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002110 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 6.8e-91 Identity = 231/641 (36.04%), Postives = 295/641 (46.02%), Query Frame = 0
BLAST of ClCG11G000910 vs. ExPASy TrEMBL
Match: A0A5A7UM77 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G002210 PE=4 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 6.8e-91 Identity = 231/641 (36.04%), Postives = 295/641 (46.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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