ClCG10G021700 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG10G021700
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr10: 36301724 .. 36306661 (-)
RNA-Seq ExpressionClCG10G021700
SyntenyClCG10G021700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAGAAAGGAAGAAAACAGGAAAATTGAAGATGGGGGAGAGGAAGGGTTGAAGGAAGAAGCTGAAATGAACCCATGGGTGCTTCAGGTTTTAGGGTTTATCCAAATTTGCCAACAAAACTTATCTTGGAACCCAAACACCCAAAAGAAAGCTACTGTCGAGCTGGTTTGTCTTTTTCTCGCTAAATAGAATAGAAAACTGTCGGAGTTATCAATGCTTTGACGTTCATCCTACGGCTATAACTCCACTTCTTCATCTGAAAGTCTGTCAACCGCTCGATTAAAGCGGTCGTCCCCCTCAATTCCTTTCTTCCACTAGAATTAACAGGTTGTTTCTTTGATTAATCTTCCACCTCTGTTCTCCAAAGCTGAACCCCTCTATCTCGCTCGCACTCAGAATTCATCAAAAGAAAGGTGAGAAAACGAGAATCTCTATTTGATTATGTTCAGTTTGGATTTATTTCTTCTTCTGGGTCCAAAAATCCGTGATGGATGTTACCCAATCGTAAGATTTCCTTCATGATTTCTTTCAATATTTGAAACCCCCTTTGATTTTTCTGTTCTAAAGTTTGATCGGTTCATGATTTGACAAGTTCTCTCGTTTTTGCACATGAAGCAGATATGGGTTTCTGGACCTTCTTAGAAGGGCTTCTACTGTTTGCAAATGCCTTTGCAATTCTGAACGAGGATCGTTTTCTTGCTCGGAGAGGATGGACATTAGCAGAGATGTCGAGAGAAAGAAGAAGCACGCTCAAAGGGCAGGTAATAGGGTTCATCCATGCATGCCAATTCTTGAGAGTTCCACTCATTCTTTTCAACATCATCATCATCATCATCAAGCTCTTCTCTGGTTGATTTCAGTATATAACGTGAAAGAGCTCCCTCTAAATTATTGTATCTTGTAGCATTACATGATCGAATTGAGTGAAATGTAGTTCCATTACTGGTAATATGTTTGTTTGTTCTTGAATGGCAGATTAACACTCTAGTTTTTGCTCTAATGCTCTTAATTTTAGCTTGCTTTTTTTGTTGTCAACCCACTTTGTGAGTTCATTTCTTTTGGTCACACAAACTTGTAGGAAGAATCACCCAGCATATTCATTGACCTCAAAAATCCTCTGTTTATAAGAACACAAACTGATCTATAGGTTCTAAAATACAATTTTGGAGCAACCCAGTTTATCATACATGAGAGTCTTATGCAGAAGAAAGAAACAGAGCCTAGAAATGGTACTAATACATCATTATCAAACACAGAATGCTCAAAAACACTACAAATCAAATCATTCTACTGGTATCATAACTTCGTTAGTTCTCAAAGAAGGCAATGTCCAAGGTGGGTTATATCTCGCCAACACAAAATCCCCAATCACCTTATGCCCATCTTTCTCCAAGCTTTTCTTCAGATTCTCCACCTTCTGCGCCACCACTCCCTCCGTCGCAATTCCGCTGAATCTCACGACGGCGAGTTTTCTCTCCCCTTCTTTCCTTATCACAACACTTCCATCCACCGGTTTAGGAGCCTCCTCCGCCTTCTTGTACTTGCTAGGTAGAACGAACTGCATCGTCACCGGCTTCCCTTCTTCGCCGCCGCCCCCCGTCACCACCGGAGCTGTCATCGAAATCTTCTCCGATTTGGTGATCACCGGCGCCGTCATGGCTACCTTCTCGGACTTGATGTTCTGTGGCTGGCCAATGGCTCCAATGTATTTTGCTAATACGGTGAAGCCACCGTCTCTGTTGCCTCTGAACTGGGTCGGATCATAGGTGACTTCGGCCACCACCGATGGCTCGTATTTGCGGATTTCGTAGTCCGCAGTGGATTGAATGAGCTCGTATTTTGGGGTTTCAACACTGATCTTCCCGAGAATCAAACCCATATTAGGTAAACTTAGTTAAGGAGGTTCAGGGTTGCTGATTTATACGTTGAGAAGAAAGGCGGTTGCTTGAAGGAGGGGTTGGAATTGGGAAGTTCAGCCATGGAATAAGTGGTGGAAGTTGGAGGAGCTGTTTGTGGCTTTTATTTGTCCACGACTACTTCGATGCAAATGGATATGAAGCAGATGAATCAAAGCTTCCATGTGTAAGGAATGCAAATGTCTAGAATCCGTTGTTTTGAAGTTATCCTATGTAAGTTGATTACATGGGATCTTAACCTTATCATGCTGTTTCGAGCATAACCACAGTACCACGGTCCAAATTTTCATCTCAGTTTTTAATTAATTTTGTTTCGTATAATTTTGAAATAGTTATGAAATGTTAAGGATAGTATCATAACTTTCTTTTTAAACAATGGAGTAACCTTTTTAACATTTTTTTTTTTATTTAACTTTGAATTTTTTAGTTTATTTTAGTGGAGTTTGGACATGGGACAATACACTTTGAGAAGATATATATATATATATTTCCTAATATGTAGCATAATAATATATTGACGATAATATTTAATAACGACAGTCATGCATCACTTGTGTTTCGAAGGCACTCTTGGCTTGTACTCAACTTTGCGGGTTGGCTAGTTAGAAGGGGGTGATTTTGGATGACACAAAAACAGAAGTTCGAGCATATAAAATAACAAAATTTGGGGCAAAATAAGCTCGAAGAGGGTTGTCTTGGGCGAAGGTCCACAACCTAGTGAGTTGAAGTGTTAACATTATTCTTCCTTGTATTGAATTGATTTTAAGAGCGAAGACTATCATCATAAATCAACACAGGTCCTTTTAGCATTCAAGAGATCACTCAACATAGGAGCTCGTTTAAGTTTTAACTTCAAGCTCTTATAATCGAGCCACTGTAAGGGAAAGTACACCTTCAATTATTTGAAGCTTTACACAACAATTGAAAAAGATGTAACGATGTCAACAACAAAAAAAGTGTGAAGATGGTGATGGAAGTTTCATCGAGGAAGGGTTTAAGAAAATGATAGAGAAGAGGGAAAGAAAACGCAACCACATTGCCAATTTACGACCCCATCATTTTGTCGTTAGTCAACTAACGATTCAAATAGTCTCGGAATTCAGAATCATTTCTTGAATTTTGAACACTAAATTATTTATTTTAAAACTTTATTGAACAAATAGACATTAACTTAAAAAAAACCTAATGGACTAAAAATGCATTTTGAACATACATATAGATGTAACCTTAAATATTCATAAATCAACAAAAGCGATCCTAAATATTTATACAAAAATAAATTTAATGAATATATAAAAACAAAACAAATCTAAATCATCGTGTGCAAAGAAAAAACCCTAAATCCCATGAGTAAAATTACGCCCCTAACCCTGTGGCACCTTATGTAATGATTCCTTCGTCGATCATTCTAATAATTCTCTTCTGAAAACAGTGCTAGGGTTCGTTTTCTTGACGCCACCGCCCGTCGCCCTTCTTGCTGCGAAACCGCTTTGTTGTCGGTGATATTTCTTTTCGTCTATTCGGCTATCAGTGGTCCTTATAAGTTGTTTCCGTTTCTTCTATTTCGTATTTTACTGTTCATCCGGCCTTTAATCTCATGTTTTCCGGCAGCATCGATGATGAAACAATCTTATCGTTATCCTTGCACTTTGATTTACCGTGAAGAAAATCATGGGGAATATTGTTCCTGAGATGCATTTGTACTTTAGAAGGACTCGTTAGTCTGCGATTGTGTAGATTAAGCATTGCTTTTTTCTAACTTCATATCTGGATCGATGATGTGATTTAAAATCTGCGTTATCTATCTGCAATTTCCTTCTAGGAATTGAAGATGACGGATAATCTCTGAGATCTGTTTTCTTACCCCACTTTCTGCTTCGTTTTCTGTAATCTGGACTATTTGAACTGTTCCCCCTCTGAGTTTCTCAGAGATCTAGGAATTTTCGTTCGTTTGGTTTATTGGTTGTGTGCTTCCTAATGCGGACCTTGGATCCATGATGTTAATGAAAAACTGCGTTATCTATCTGTAAGGTTCCTTCATGGAGTTGATGATATCAATGATTTCTGAGATCCAAACTGCGCTGTTTTGTTCAATAGTTGTAGGTGGATTAGTTTCATTTTAGAACATCAGTTTTCAACTTTATGCCGGTTGGTGGCTGGTGGGTATTGTTGCCAATTTTGATTGAACATAACTTCTTTTTTTTTTTGGCCATATCATCTTTTCTCCACCCACTTCACATCCACCATTTTCAAGATGCAGTCATTTGTAGCTTCCGTGCTTTTTTCTGGCTGATGGGTTTTGCTGCCATTTTAAGCTGGCTGTGGCTGCCGTTTTGTGATTGAACATTCAAACAATTGCTCATCAGTTTCATTTTTGTTTCTGTTTGATCCTTGCTTCCACATGTATATTATTTTGGGTTTTTTTTTTTTTTCCCTGTCCTTTTTCTGCCATTTGTGTTTTGCCGTTTATCTATTTATTTTTGGTATAACATGTCAAATTGATCACTTGTACTAACTGGGCTAATTTAGGAGGCAGAGTTCTGTGTCAAACTAAGGCTAAGACTGATAAGCTTTTGAAAATTGTTTATAGGATAATGTATTTCAAGAATCCATCTTCATGCATTCTCTTTAACAGTAGAGTTGAATGCTCAAAGATATGTGTTGTCCGCACAGTTAGAACCTTGCCTTTCATATATGGTAAACAAACAAAGCTTAAACTATCAAAATTTGATACTTAAATCATGGAACAATGTGATGTATTTTCAAGAGTTTGCTACACTTTTGGGAAGTGAAGGGATTCTTTTTTCACGCAGTTCGAAGAGTCATCTTTTGGAAGCGATCAGGATGCAAATCTAAAAACTAATCTAATGGTGTAGATCTTACAATCTTCTATTCACTGCAATTATGTAATTTATAATTGCTTTGTGGCAAGGAACTTTTAATTTTGGTTTCCAACATTTATGTTGTAATAATAATACCAATGATTTAAAAATAAAGCCGGTTAAGCTTGGTAGTCTTT

mRNA sequence

ATGAGTAGAAAGGAAGAAAACAGGAAAATTGAAGATGGGGGAGAGGAAGGGTTGAAGGAAGAAGCTGAAATGAACCCATGGGTGCTTCAGGTTTTAGGGTTTATCCAAATTTGCCAACAAAACTTATCTTGGAACCCAAACACCCAAAAGAAAGCTACTGTCGAGCTGGTTGTTTCTTTGATTAATCTTCCACCTCTGTTCTCCAAAGCTGAACCCCTCTATCTCGCTCGCACTCAGAATTCATCAAAAGAAAGATATGGGTTTCTGGACCTTCTTAGAAGGGCTTCTACTGTTTGCAAATGCCTTTGCAATTCTGAACGAGGATCGTTTTCTTGCTCGGAGAGGATGGACATTAGCAGAGATGTCGAGAGAAAGAAGAAGCACGCTCAAAGGGCAGTTCGAAGAGTCATCTTTTGGAAGCGATCAGGATGCAAATCTAAAAACTAATCTAATGGTGTAGATCTTACAATCTTCTATTCACTGCAATTATGTAATTTATAATTGCTTTGTGGCAAGGAACTTTTAATTTTGGTTTCCAACATTTATGTTGTAATAATAATACCAATGATTTAAAAATAAAGCCGGTTAAGCTTGGTAGTCTTT

Coding sequence (CDS)

ATGAGTAGAAAGGAAGAAAACAGGAAAATTGAAGATGGGGGAGAGGAAGGGTTGAAGGAAGAAGCTGAAATGAACCCATGGGTGCTTCAGGTTTTAGGGTTTATCCAAATTTGCCAACAAAACTTATCTTGGAACCCAAACACCCAAAAGAAAGCTACTGTCGAGCTGGTTGTTTCTTTGATTAATCTTCCACCTCTGTTCTCCAAAGCTGAACCCCTCTATCTCGCTCGCACTCAGAATTCATCAAAAGAAAGATATGGGTTTCTGGACCTTCTTAGAAGGGCTTCTACTGTTTGCAAATGCCTTTGCAATTCTGAACGAGGATCGTTTTCTTGCTCGGAGAGGATGGACATTAGCAGAGATGTCGAGAGAAAGAAGAAGCACGCTCAAAGGGCAGTTCGAAGAGTCATCTTTTGGAAGCGATCAGGATGCAAATCTAAAAACTAA

Protein sequence

MSRKEENRKIEDGGEEGLKEEAEMNPWVLQVLGFIQICQQNLSWNPNTQKKATVELVVSLINLPPLFSKAEPLYLARTQNSSKERYGFLDLLRRASTVCKCLCNSERGSFSCSERMDISRDVERKKKHAQRAVRRVIFWKRSGCKSKN
Homology
[Close]
BLAST of ClCG10G021700 vs. NCBI nr
Match: KAG6596369.1 (hypothetical protein SDJN03_09549, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 59.3 bits (142), Expect = 3.2e-05
Identity = 35/67 (52.24%), Postives = 40/67 (59.70%), Query Frame = 0 

Query: 66  LFSKAEPLYLARTQNSSKERYGFLDLLRRASTVCKCLCNSERGSFSCSERMDISRDVERK 125
           LFS+ E       + SS ERY  LD   RAS V K L NS+RGS  CSERMD+    ER+
Sbjct: 28  LFSRPETNTNRLLRKSSNERYAILDFFGRASAVRKRLRNSKRGSIPCSERMDVGGYAERR 87

Query: 126 KKHAQRA 133
           KK AQ A
Sbjct: 88  KKLAQSA 94

The following BLAST results are available for this feature:
BLAST of ClCG10G021700 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6596369.13.2e-0552.24hypothetical protein SDJN03_09549, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of ClCG10G021700 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG10G021700 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG10G021700 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG10G021700.2ClCG10G021700.2mRNA