ClCG10G021070 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G021070
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	H/ACA ribonucleoprotein complex subunit 4
Location	CG_Chr10: 35854696 .. 35855090 (-)
RNA-Seq Expression	ClCG10G021070
Synteny	ClCG10G021070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGAAGTTAAAATTTCTCATTCAAAGAATAAGAAGAAGAAGCACCGGAGCAAGGATGAGGAAGTGTCATCGGCTTTTGGTTCCAACAAGCAACCACAAAAGGATGTTGCTTATTTTATGATCAAGCCTCAGAGTTTTACTCTTCTGGTGGACACATCTCAATGCCCTATTCTTCCGAAGAACTAGGACTGTCTTAATGTACATACTGGTCACTACACTCATTTTTTGTATGTTTCTCCCCTCTCAAGTGGCCTCAGACTGAGTATATTAGGTATGGTATTCTCAATCTTGATAAAGCAGTGAATCCTTTGACGCACGAAGTTCTGGCTTTGATTAAGTGGGTTCTTTGGGTTGATAGAACGGGCCATGTGGTACTCTCGACCCGAATGTAA

mRNA sequence

ATGTCGGAAGTTAAAATTTCTCATTCAAAGAATAAGAAGAAGAAGCACCGGAGCAAGGATGAGGAAGTGTCATCGGCTTTTGGTTCCAACAAGCAACCACAAAAGGATGTTGCTTATTTTATGATCAAGCCTCAGAGTTTTACTCTTCTGTGGCCTCAGACTGAGTATATTAGGTATGGTATTCTCAATCTTGATAAAGCAGTGAATCCTTTGACGCACGAAGTTCTGGCTTTGATTAAGTGGGTTCTTTGGGTTGATAGAACGGGCCATGTGGTACTCTCGACCCGAATGTAA

Coding sequence (CDS)

ATGTCGGAAGTTAAAATTTCTCATTCAAAGAATAAGAAGAAGAAGCACCGGAGCAAGGATGAGGAAGTGTCATCGGCTTTTGGTTCCAACAAGCAACCACAAAAGGATGTTGCTTATTTTATGATCAAGCCTCAGAGTTTTACTCTTCTGTGGCCTCAGACTGAGTATATTAGGTATGGTATTCTCAATCTTGATAAAGCAGTGAATCCTTTGACGCACGAAGTTCTGGCTTTGATTAAGTGGGTTCTTTGGGTTGATAGAACGGGCCATGTGGTACTCTCGACCCGAATGTAA

Protein sequence

MSEVKISHSKNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFTLLWPQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVDRTGHVVLSTRM

Homology

[Close]

BLAST of ClCG10G021070 vs. NCBI nr
Match: XP_022145634.1 (H/ACA ribonucleoprotein complex subunit 4 [Momordica charantia])

HSP 1 Score: 106.7 bits (265), Expect = 1.2e-19
Identity = 65/124 (52.42%), Postives = 74/124 (59.68%), Query Frame = 0


Query: 1   MSEVKISHSKNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFT------------ 60
           MSEV+IS S+ KKKKHRSKDE+VS A GS++QPQKD A FMIKPQSFT            
Sbjct: 1   MSEVEISRSEKKKKKHRSKDEDVSPAVGSDEQPQKDAADFMIKPQSFTPPVDTSQWPILL 60

Query: 61  ----------------------LLWPQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVD 91
                                 L  P  EYIRYGILNLDK  NP +HEV+A IK +L VD
Sbjct: 61  KNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVD 120

[Close]

BLAST of ClCG10G021070 vs. NCBI nr
Match: XP_023539854.1 (H/ACA ribonucleoprotein complex subunit 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 101.3 bits (251), Expect = 4.9e-18
Identity = 62/124 (50.00%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 1   MSEVKISHSKNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFT------------ 60
           MS+V+IS S+ KKKKHRSKDEEVS   GS++QP KDVA F+IKPQSFT            
Sbjct: 1   MSDVEISRSEKKKKKHRSKDEEVSPVVGSDEQPLKDVADFLIKPQSFTPPVDTSQWPILL 60

Query: 61  ----------------------LLWPQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVD 91
                                 L  P  +YIRYGILNLDK  NP +HEV+A IK +L VD
Sbjct: 61  KNYDRLNVRTGHYTPLPSGFSPLKRPLIDYIRYGILNLDKPANPSSHEVVAWIKRILRVD 120

[Close]

BLAST of ClCG10G021070 vs. NCBI nr
Match: KAG7027955.1 (H/ACA ribonucleoprotein complex subunit 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 101.3 bits (251), Expect = 4.9e-18
Identity = 62/124 (50.00%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 1   MSEVKISHSKNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFT------------ 60
           MS+V+IS S+ KKKKHRSKDEEVS   GS++QP KDVA F+IKPQSFT            
Sbjct: 1   MSDVEISRSEKKKKKHRSKDEEVSPVVGSDEQPLKDVADFLIKPQSFTPPVDTSQWPILL 60

Query: 61  ----------------------LLWPQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVD 91
                                 L  P  +YIRYGILNLDK  NP +HEV+A IK +L VD
Sbjct: 61  KNYDRLNVRTGHYTPLPSGFSPLKRPLIDYIRYGILNLDKPANPSSHEVVAWIKRILRVD 120

[Close]

BLAST of ClCG10G021070 vs. NCBI nr
Match: XP_022941699.1 (H/ACA ribonucleoprotein complex subunit 4-like [Cucurbita moschata] >KAG6596411.1 H/ACA ribonucleoprotein complex subunit 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 101.3 bits (251), Expect = 4.9e-18
Identity = 62/124 (50.00%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 1   MSEVKISHSKNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFT------------ 60
           MS+V+IS S+ KKKKHRSKDEEVS   GS++QP KDVA F+IKPQSFT            
Sbjct: 1   MSDVEISRSEKKKKKHRSKDEEVSPVVGSDEQPLKDVADFLIKPQSFTPPVDTSQWPILL 60

Query: 61  ----------------------LLWPQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVD 91
                                 L  P  +YIRYGILNLDK  NP +HEV+A IK +L VD
Sbjct: 61  KNYDRLNVRTGHYTPLPSGFSPLKRPLIDYIRYGILNLDKPANPSSHEVVAWIKRILRVD 120

[Close]

BLAST of ClCG10G021070 vs. NCBI nr
Match: XP_023527935.1 (LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex subunit 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 100.5 bits (249), Expect = 8.3e-18
Identity = 62/124 (50.00%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 1   MSEVKISHSKNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFT------------ 60
           MS V+IS S+ KKKKHRSKD+EVS A GS++QP KDVA FMIKPQSFT            
Sbjct: 1   MSGVEISRSEKKKKKHRSKDDEVSPAVGSDEQPPKDVADFMIKPQSFTPPVDTSQWPILL 60

Query: 61  ----------------------LLWPQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVD 91
                                 L  P  +YIRYGILNLDK  NP +HEV+A IK +L V+
Sbjct: 61  KNYDRLNVRTGHYTPLPSGFSPLKRPLVDYIRYGILNLDKPANPSSHEVVAWIKRILRVE 120

[Close]

BLAST of ClCG10G021070 vs. ExPASy Swiss-Prot
Match: Q9LD90 (H/ACA ribonucleoprotein complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=CBF5 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 4.3e-09
Identity = 45/124 (36.29%), Postives = 55/124 (44.35%), Query Frame = 0


Query: 1   MSEVKISHSKNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFT------------ 60
           M+EV ISHSK KK+     D               D   +MIKPQSFT            
Sbjct: 1   MAEVDISHSKKKKQDKTEND-------------AADTGDYMIKPQSFTPAIDTSQWPILL 60

Query: 61  ----------------------LLWPQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVD 91
                                 L  P  EYIRYG++NLDK  NP +HEV+A IK +L V+
Sbjct: 61  KNYDRLNVRTGHYTPISAGHSPLKRPLQEYIRYGVINLDKPANPSSHEVVAWIKRILRVE 111

[Close]

BLAST of ClCG10G021070 vs. ExPASy Swiss-Prot
Match: O14007 (H/ACA ribonucleoprotein complex subunit cbf5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cbf5 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.7e-05
Identity = 20/39 (51.28%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 52 PQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVDRTGH 91
          P  EY+  G++NLDK  NP +HEV+A +K +L V++TGH
Sbjct: 57 PIAEYVSSGVINLDKPANPSSHEVVAWVKKILRVEKTGH 95

[Close]

BLAST of ClCG10G021070 vs. ExPASy Swiss-Prot
Match: Q54T81 (Probable H/ACA ribonucleoprotein complex subunit 4 OS=Dictyostelium discoideum OX=44689 GN=nola4 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.9e-05
Identity = 31/99 (31.31%), Postives = 48/99 (48.48%), Query Frame = 0


Query: 10  KNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFTLLWPQT--------------- 69
           K+K K      +EV       K P  D + + +  +++  L  +T               
Sbjct: 6   KSKSKSSEKSTQEVEQVIKPEKTPILDTSKWPLLLKNYDQLSVRTGHYTPIPNGHSPLKR 65

Query: 70  ---EYIRYGILNLDKAVNPLTHEVLALIKWVLWVDRTGH 91
              EY++YGI+NLDK  NP +HEV+A I+ +L V +TGH
Sbjct: 66  PIKEYVKYGIINLDKPSNPSSHEVVAWIRTILRVTKTGH 104

[Close]

BLAST of ClCG10G021070 vs. ExPASy Swiss-Prot
Match: P40615 (H/ACA ribonucleoprotein complex subunit DKC1 OS=Rattus norvegicus OX=10116 GN=Dkc1 PE=1 SV=4)

HSP 1 Score: 47.8 bits (112), Expect = 8.4e-05
Identity = 20/36 (55.56%), Postives = 28/36 (77.78%), Query Frame = 0


Query: 55  EYIRYGILNLDKAVNPLTHEVLALIKWVLWVDRTGH 91
           EY+R G +NLDK  NP +HEV+A I+ +L V++TGH
Sbjct: 86  EYVRTGFINLDKPSNPSSHEVVAWIRRILRVEKTGH 121

[Close]

BLAST of ClCG10G021070 vs. ExPASy Swiss-Prot
Match: G0SGK0 (H/ACA ribonucleoprotein complex subunit CBF5 OS=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) OX=759272 GN=CBF5 PE=3 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 1.1e-04
Identity = 20/35 (57.14%), Postives = 27/35 (77.14%), Query Frame = 0


Query: 56  YIRYGILNLDKAVNPLTHEVLALIKWVLWVDRTGH 91
           Y+  G++NLDK  NP +HEV+A IK +L VD+TGH
Sbjct: 67  YVSSGVINLDKPSNPSSHEVVAWIKRILRVDKTGH 101

[Close]

BLAST of ClCG10G021070 vs. ExPASy TrEMBL
Match: A0A6J1CVU2 (H/ACA ribonucleoprotein complex subunit 4 OS=Momordica charantia OX=3673 GN=LOC111015035 PE=3 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 5.6e-20
Identity = 65/124 (52.42%), Postives = 74/124 (59.68%), Query Frame = 0


Query: 1   MSEVKISHSKNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFT------------ 60
           MSEV+IS S+ KKKKHRSKDE+VS A GS++QPQKD A FMIKPQSFT            
Sbjct: 1   MSEVEISRSEKKKKKHRSKDEDVSPAVGSDEQPQKDAADFMIKPQSFTPPVDTSQWPILL 60

Query: 61  ----------------------LLWPQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVD 91
                                 L  P  EYIRYGILNLDK  NP +HEV+A IK +L VD
Sbjct: 61  KNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGILNLDKPANPSSHEVVAWIKRILRVD 120

[Close]

BLAST of ClCG10G021070 vs. ExPASy TrEMBL
Match: A0A6J1FP65 (H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita moschata OX=3662 GN=LOC111446978 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.4e-18
Identity = 62/124 (50.00%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 1   MSEVKISHSKNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFT------------ 60
           MS+V+IS S+ KKKKHRSKDEEVS   GS++QP KDVA F+IKPQSFT            
Sbjct: 1   MSDVEISRSEKKKKKHRSKDEEVSPVVGSDEQPLKDVADFLIKPQSFTPPVDTSQWPILL 60

Query: 61  ----------------------LLWPQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVD 91
                                 L  P  +YIRYGILNLDK  NP +HEV+A IK +L VD
Sbjct: 61  KNYDRLNVRTGHYTPLPSGFSPLKRPLIDYIRYGILNLDKPANPSSHEVVAWIKRILRVD 120

[Close]

BLAST of ClCG10G021070 vs. ExPASy TrEMBL
Match: A0A6J1J6M3 (H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita maxima OX=3661 GN=LOC111481852 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.0e-18
Identity = 62/124 (50.00%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 1   MSEVKISHSKNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFT------------ 60
           MS V+IS S+ KKKKHRSKD+EVS A GS++QP KDVA FMIKPQSFT            
Sbjct: 1   MSGVEISRSEKKKKKHRSKDDEVSPAVGSDEQPPKDVADFMIKPQSFTPSVDTSQWPILL 60

Query: 61  ----------------------LLWPQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVD 91
                                 L  P  +YIRYGILNLDK  NP +HEV+A IK +L V+
Sbjct: 61  KNYDRLNVRTGHYTPLPSGFSPLKRPLADYIRYGILNLDKPANPSSHEVVAWIKRILRVE 120

[Close]

BLAST of ClCG10G021070 vs. ExPASy TrEMBL
Match: A0A6J1F3Q2 (H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita moschata OX=3662 GN=LOC111441884 PE=3 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 4.0e-18
Identity = 62/124 (50.00%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 1   MSEVKISHSKNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFT------------ 60
           MS V+IS S+ KKKKHRSKD+EVS A GS++QP KDVA FMIKPQSFT            
Sbjct: 1   MSGVEISRSEKKKKKHRSKDDEVSPAVGSDEQPPKDVADFMIKPQSFTPPVDTSQWPILL 60

Query: 61  ----------------------LLWPQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVD 91
                                 L  P  +YIRYGILNLDK  NP +HEV+A IK +L V+
Sbjct: 61  KNYDRLNVRTGHYTPLPSGFSPLKRPLADYIRYGILNLDKPANPSSHEVVAWIKRILRVE 120

[Close]

BLAST of ClCG10G021070 vs. ExPASy TrEMBL
Match: A0A6J1I1U9 (H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita maxima OX=3661 GN=LOC111470135 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.2e-17
Identity = 61/124 (49.19%), Postives = 72/124 (58.06%), Query Frame = 0


Query: 1   MSEVKISHSKNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFT------------ 60
           MS+V+IS S+ KKKKHRSKDEEVS    S++QP KDVA F+IKPQSFT            
Sbjct: 1   MSDVEISRSEKKKKKHRSKDEEVSPVVASDEQPLKDVADFLIKPQSFTPPVDTSQWPILL 60

Query: 61  ----------------------LLWPQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVD 91
                                 L  P  +YIRYGILNLDK  NP +HEV+A IK +L VD
Sbjct: 61  KNYDRLNVRTGHYTPLPSGFSPLKRPLIDYIRYGILNLDKPANPSSHEVVAWIKRILRVD 120

[Close]

BLAST of ClCG10G021070 vs. TAIR 10
Match: AT3G57150.1 (homologue of NAP57 )

HSP 1 Score: 62.0 bits (149), Expect = 3.0e-10
Identity = 45/124 (36.29%), Postives = 55/124 (44.35%), Query Frame = 0


Query: 1   MSEVKISHSKNKKKKHRSKDEEVSSAFGSNKQPQKDVAYFMIKPQSFT------------ 60
           M+EV ISHSK KK+     D               D   +MIKPQSFT            
Sbjct: 1   MAEVDISHSKKKKQDKTEND-------------AADTGDYMIKPQSFTPAIDTSQWPILL 60

Query: 61  ----------------------LLWPQTEYIRYGILNLDKAVNPLTHEVLALIKWVLWVD 91
                                 L  P  EYIRYG++NLDK  NP +HEV+A IK +L V+
Sbjct: 61  KNYDRLNVRTGHYTPISAGHSPLKRPLQEYIRYGVINLDKPANPSSHEVVAWIKRILRVE 111

The following BLAST results are available for this feature:

BLAST of ClCG10G021070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145634.1	1.2e-19	52.42	H/ACA ribonucleoprotein complex subunit 4 [Momordica charantia]	[more]
XP_023539854.1	4.9e-18	50.00	H/ACA ribonucleoprotein complex subunit 4-like [Cucurbita pepo subsp. pepo]	[more]
KAG7027955.1	4.9e-18	50.00	H/ACA ribonucleoprotein complex subunit 4, partial [Cucurbita argyrosperma subsp...	[more]
XP_022941699.1	4.9e-18	50.00	H/ACA ribonucleoprotein complex subunit 4-like [Cucurbita moschata] >KAG6596411....	[more]
XP_023527935.1	8.3e-18	50.00	LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex subunit 4-like [Cucurbita p...	[more]

BLAST of ClCG10G021070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LD90	4.3e-09	36.29	H/ACA ribonucleoprotein complex subunit 4 OS=Arabidopsis thaliana OX=3702 GN=CBF...	[more]
O14007	1.7e-05	51.28	H/ACA ribonucleoprotein complex subunit cbf5 OS=Schizosaccharomyces pombe (strai...	[more]
Q54T81	4.9e-05	31.31	Probable H/ACA ribonucleoprotein complex subunit 4 OS=Dictyostelium discoideum O...	[more]
P40615	8.4e-05	55.56	H/ACA ribonucleoprotein complex subunit DKC1 OS=Rattus norvegicus OX=10116 GN=Dk...	[more]
G0SGK0	1.1e-04	57.14	H/ACA ribonucleoprotein complex subunit CBF5 OS=Chaetomium thermophilum (strain ...	[more]

BLAST of ClCG10G021070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CVU2	5.6e-20	52.42	H/ACA ribonucleoprotein complex subunit 4 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1FP65	2.4e-18	50.00	H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1J6M3	4.0e-18	50.00	H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1F3Q2	4.0e-18	50.00	H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1I1U9	1.2e-17	49.19	H/ACA ribonucleoprotein complex subunit 4-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of ClCG10G021070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57150.1	3.0e-10	36.29	homologue of NAP57	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012960	Dyskerin-like	PFAM	PF08068	DKCLD	coord: 54..75 e-value: 2.4E-6 score: 27.5
None	No IPR available	GENE3D	3.30.2350.10	Pseudouridine synthase	coord: 52..91 e-value: 1.1E-7 score: 33.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 51..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G021070.1	ClCG10G021070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034660	ncRNA metabolic process
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0006396	RNA processing
biological_process	GO:0009451	RNA modification
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding