ClCG10G019800 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G019800
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	F-box protein CPR30-like
Location	CG_Chr10: 34729252 .. 34729929 (-)
RNA-Seq Expression	ClCG10G019800
Synteny	ClCG10G019800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACATCTTCACACAGGATTCGGGTACGACGCGAAATGTAAGGATTTTAAAGTGGTTAAAGTTATTGGGTTTTCAGATGAATTGTATTCTTTTCCTTCAAGAGTGGAAATTTACGATTTGAGCAAAGATAGATGGAGAGAAATTGAAGCTCCTGGTTGTGGATTTGTACATTCGATGTCTTTGTTTGACATGTATCACAAAGGAAAATTTTACTAGTGGGCGTATAGTGAAAACCTATCTGAAACACTTGAAATAATACAAACATTTGACATAAGCGAAGAGGTTTTTGGCAAAATTTTGTATCCAGAGACTATGGAAGGGAAGGTGAAGGATAGTAATAAAAGTTTAGGGATTTTAAACGAATCAATTGTTCTATTTGATTATCCATTTCGTGGGAATGAAAAAACATTTGACATTTGGGAGATGGAGAATGATGAATTTGGTGTTATTTTGTGGTCGAAGCTATTGACAATTGGCCCTGTTTCTAGAATTGAGTATCCATTATTGTTTGTGAGCTACGATGAACTTTTAATGAAGTGTGATGAAGGAGAGGTGATTTTGTACAATATTAAAACTGAACAGTTGAAAGAGCTCCCACTAAAAGGGCTTCAAATACCTGAAAGTAGCAACATGTTAGAAGTAACCTTTTTTTTGTTAAGAGTTTGTTGTCTGTAG

mRNA sequence

ATGCAACATCTTCACACAGGATTCGGGTACGACGCGAAATGTAAGGATTTTAAAGTGGTTAAAGTTATTGGGTTTTCAGATGAATTGTATTCTTTTCCTTCAAGAGTGGAAATTTACGATTTGAGCAAAGATAGATGGAGAGAAATTGAAGCTCCTGGTTGTGGATTTTGGGCGTATAGTGAAAACCTATCTGAAACACTTGAAATAATACAAACATTTGACATAAGCGAAGAGGTTTTTGGCAAAATTTTGTATCCAGAGACTATGGAAGGGAAGGTGAAGGATAGTAATAAAAGTTTAGGGATTTTAAACGAATCAATTGTTCTATTTGATTATCCATTTCGTGGGAATGAAAAAACATTTGACATTTGGGAGATGGAGAATGATGAATTTGGTGTTATTTTGTGGTCGAAGCTATTGACAATTGGCCCTGTTTCTAGAATTGAGTATCCATTATTGTTTGTGAGCTACGATGAACTTTTAATGAAGTGTGATGAAGGAGAGGTGATTTTGTACAATATTAAAACTGAACAGTTGAAAGAGCTCCCACTAAAAGGGCTTCAAATACCTGAAAGTAGCAACATGTTAGAAGTAACCTTTTTTTTGTTAAGAGTTTGTTGTCTGTAG

Coding sequence (CDS)

ATGCAACATCTTCACACAGGATTCGGGTACGACGCGAAATGTAAGGATTTTAAAGTGGTTAAAGTTATTGGGTTTTCAGATGAATTGTATTCTTTTCCTTCAAGAGTGGAAATTTACGATTTGAGCAAAGATAGATGGAGAGAAATTGAAGCTCCTGGTTGTGGATTTTGGGCGTATAGTGAAAACCTATCTGAAACACTTGAAATAATACAAACATTTGACATAAGCGAAGAGGTTTTTGGCAAAATTTTGTATCCAGAGACTATGGAAGGGAAGGTGAAGGATAGTAATAAAAGTTTAGGGATTTTAAACGAATCAATTGTTCTATTTGATTATCCATTTCGTGGGAATGAAAAAACATTTGACATTTGGGAGATGGAGAATGATGAATTTGGTGTTATTTTGTGGTCGAAGCTATTGACAATTGGCCCTGTTTCTAGAATTGAGTATCCATTATTGTTTGTGAGCTACGATGAACTTTTAATGAAGTGTGATGAAGGAGAGGTGATTTTGTACAATATTAAAACTGAACAGTTGAAAGAGCTCCCACTAAAAGGGCTTCAAATACCTGAAAGTAGCAACATGTTAGAAGTAACCTTTTTTTTGTTAAGAGTTTGTTGTCTGTAG

Protein sequence

MQHLHTGFGYDAKCKDFKVVKVIGFSDELYSFPSRVEIYDLSKDRWREIEAPGCGFWAYSENLSETLEIIQTFDISEEVFGKILYPETMEGKVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKGLQIPESSNMLEVTFFLLRVCCL

Homology

[Close]

BLAST of ClCG10G019800 vs. NCBI nr
Match: XP_031737581.1 (F-box/kelch-repeat protein At3g23880-like [Cucumis sativus] >KGN59212.2 hypothetical protein Csa_002052 [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 9.3e-59
Identity = 129/222 (58.11%), Postives = 157/222 (70.72%), Query Frame = 0


Query: 7   GFGYDAKCKDFKVVKVIG---FSDELYSFPSRVEIYDLSKDRWREIEAPGCG-------- 66
           GF YDAK KDFKVV+V+      D  +    RVEIYDLSKDRWREI+A GC         
Sbjct: 170 GFCYDAKSKDFKVVRVVRPYLIEDYDFYISPRVEIYDLSKDRWREIDASGCETVHHNSLF 229

Query: 67  ---------FWAYS-----ENLSETL-EIIQTFDISEEVFGKILYPETMEGKVKDSNKSL 126
                    +WAY+     E+ ++ + EIIQTFDISEEVFG+I YPETM  KVK S +SL
Sbjct: 230 DMYHEGKFYWWAYNFTFNFEDPTKYMPEIIQTFDISEEVFGQIWYPETMRRKVKSSRQSL 289

Query: 127 GILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDEL 186
            ILN S+VL DY +  NEK+FDIW+ME DEFG ILW KLLTIGP+S+IEYPLLFVS +EL
Sbjct: 290 EILNGSLVLIDY-YGRNEKSFDIWKMEKDEFGAILWLKLLTIGPISKIEYPLLFVSSNEL 349

Query: 187 LMKCDEGEVILYNIKTEQLKELPLKGLQIPESSNMLEVTFFL 203
           LM+C EGE+ILY+IKT + KELP+KG Q  E +N ++ TFF+
Sbjct: 350 LMECKEGELILYDIKTGEYKELPIKGYQELEGTNSMKATFFV 390

[Close]

BLAST of ClCG10G019800 vs. NCBI nr
Match: XP_038906036.1 (F-box protein CPR1-like [Benincasa hispida])

HSP 1 Score: 234.2 bits (596), Expect = 1.0e-57
Identity = 125/195 (64.10%), Postives = 147/195 (75.38%), Query Frame = 0


Query: 7   GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWA----- 66
           GFGYD+K +DFKVV+V+ F +   Y  P RVEIYDLSKDRWREIE P CG  FWA     
Sbjct: 160 GFGYDSKSRDFKVVRVVDFVEGPGYFHPPRVEIYDLSKDRWREIETPVCGHVFWAPCFEM 219

Query: 67  YSENL----SET---LEIIQTFDISEEVFGKILYPETMEGKVKDSNKSLGILNESIVLFD 126
           Y E      +ET    EIIQTFD+SEEVFG+IL PE+ +G   D  +SLG+LN SIVLF 
Sbjct: 220 YHEGTYYWWAETEGGTEIIQTFDMSEEVFGRILVPESFQG-TGDRYRSLGVLNGSIVLFH 279

Query: 127 YPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVIL 186
           YP RG+E++FDIWEME DE G + WSKLLTIGPVS IE PLLFVS DELLM+  EG+VIL
Sbjct: 280 YPSRGDERSFDIWEMEKDESGGVSWSKLLTIGPVSGIEKPLLFVSSDELLMEASEGQVIL 339

[Close]

BLAST of ClCG10G019800 vs. NCBI nr
Match: XP_004137986.3 (F-box protein CPR1-like [Cucumis sativus] >KGN59208.2 hypothetical protein Csa_000815 [Cucumis sativus])

HSP 1 Score: 231.5 bits (589), Expect = 6.7e-57
Identity = 125/223 (56.05%), Postives = 154/223 (69.06%), Query Frame = 0


Query: 7   GFGYDAKCKDFKVVKVIGF-SDELYSF-PSRVEIYDLSKDRWREIEAPGCG--------- 66
           GF YDAK KDFKVV+V+ F  ++ YS+ P RVEIYDLSKDRWREI+   CG         
Sbjct: 170 GFCYDAKSKDFKVVRVLHFLIEDCYSYVPPRVEIYDLSKDRWREIDG-SCGAIIHWHSLF 229

Query: 67  -------FWAYSENLSETLE--------IIQTFDISEEVFGKILYPETMEGKVKDSNKSL 126
                  F+ ++ N     E        IIQTFDISEEVFG+I YPE +  KVK S +SL
Sbjct: 230 DMYHEGKFYWWANNFKYNFEDPTKYMPQIIQTFDISEEVFGQIWYPEALRRKVKYSRQSL 289

Query: 127 GILNESIVLFDYPFRG-NEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDE 186
           GILN SIVLFDY   G N+K FDIW+ME DEFG ILW KL T+GP+S++EYPLLFVS +E
Sbjct: 290 GILNGSIVLFDYIHSGQNDKMFDIWKMEKDEFGAILWLKLFTVGPISKVEYPLLFVSSNE 349

Query: 187 LLMKCDEGEVILYNIKTEQLKELPLKGLQIPESSNMLEVTFFL 203
           LLM+C EGE+ILY+IKT + KELP+KG Q  +  N ++ TF++
Sbjct: 350 LLMECKEGELILYDIKTGEYKELPIKGYQELKGRNNMKATFYV 391

[Close]

BLAST of ClCG10G019800 vs. NCBI nr
Match: XP_022935692.1 (F-box protein CPR30-like [Cucurbita moschata])

HSP 1 Score: 224.9 bits (572), Expect = 6.2e-55
Identity = 114/195 (58.46%), Postives = 144/195 (73.85%), Query Frame = 0


Query: 7   GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWAYS--- 66
           GFGYD+K +DFKVV+V+ F +   Y  P RVEIYDLSKDRWREIE P CG  FWA S   
Sbjct: 160 GFGYDSKSRDFKVVRVVNFVEGPGYFHPPRVEIYDLSKDRWREIETPICGHVFWAPSFEM 219

Query: 67  ---------ENLSETLEIIQTFDISEEVFGKILYPETMEGKVKDSNKSLGILNESIVLFD 126
                     + +E +EIIQ+FD+SEEVFG+I  PE+ E K ++  +SLG+LN SIVLF 
Sbjct: 220 YHEGTYYWWADTNEGVEIIQSFDMSEEVFGQISMPESFEEK-REKYRSLGVLNGSIVLFR 279

Query: 127 YPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVIL 186
           YP RG+E+ FDIW ME DEFG + WSKLL IGP+  IE PL+FVS+DELLM+ +EG+++L
Sbjct: 280 YPSRGDEREFDIWGMEKDEFGGVSWSKLLRIGPLRGIEKPLVFVSFDELLMEANEGQIVL 339

[Close]

BLAST of ClCG10G019800 vs. NCBI nr
Match: XP_022983805.1 (F-box protein CPR1-like [Cucurbita maxima])

HSP 1 Score: 219.9 bits (559), Expect = 2.0e-53
Identity = 113/195 (57.95%), Postives = 141/195 (72.31%), Query Frame = 0


Query: 7   GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWAYS--- 66
           GFGYD+K KDFKVV+V+ F +   Y  P R EIYDLSKDRWREIE P CG  FWA S   
Sbjct: 160 GFGYDSKSKDFKVVRVVNFVEGPGYFHPPRAEIYDLSKDRWREIETPICGHVFWAPSFEM 219

Query: 67  ---------ENLSETLEIIQTFDISEEVFGKILYPETMEGKVKDSNKSLGILNESIVLFD 126
                     +  +  EIIQ+FD+SEEVF +I  PE+ EG+ ++  +S+GILN SIVLF 
Sbjct: 220 YHEGTYYWWADTDDKEEIIQSFDMSEEVFRRIPVPESFEGE-RERYRSMGILNGSIVLFH 279

Query: 127 YPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVIL 186
           YP RG+E+ FDIW ME DEFG + WSKLLTIGP+  IE PL+FVS DELLM+ +EG+++L
Sbjct: 280 YPSRGDEREFDIWGMEKDEFGGVSWSKLLTIGPLRGIEKPLVFVSSDELLMEANEGQIVL 339

[Close]

BLAST of ClCG10G019800 vs. ExPASy Swiss-Prot
Match: Q9FFS9 (Putative F-box protein At5g41510 OS=Arabidopsis thaliana OX=3702 GN=At5g41510 PE=4 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 8.0e-05
Identity = 49/194 (25.26%), Postives = 72/194 (37.11%), Query Frame = 0


Query: 1   MQHLHTGFGYDAKCKDFKVVKVIGFSDELYSFPSR----VEIYDLSKDRWRE-------- 60
           + H     GY  K +    +K + F D  Y  P       EIYD     W          
Sbjct: 142 IDHFRYALGYADK-ESCSSLKFLRFLDYFYKAPEEEFFWYEIYDFDSGLWTTLNVTPHWG 201

Query: 61  -------IEAPGCGFWAYSENLSETL-EIIQTFDISEEVFGKILYPETMEGKVKDSNKSL 120
                  +   G  +W   E  ++   + I  FD + E FG +L   T     + S  SL
Sbjct: 202 IYSTCPCVSLKGNTYWPAKERSTQGFQDYIIRFDFTRERFGPLLALPTDR---ESSFVSL 261

Query: 121 GILNES--IVLFDYPFRGN--EKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVS 169
             + E     LF +    +  E  F+IW     E  ++ WSK L +    ++E PL F  
Sbjct: 262 SCVKEEKLAALFKHRLHHDSYEYEFEIWITTKIEVEMVSWSKFLRMDMRPKMELPLTFYI 321

[Close]

BLAST of ClCG10G019800 vs. ExPASy TrEMBL
Match: A0A6J1F6B1 (F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442474 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 3.0e-55
Identity = 114/195 (58.46%), Postives = 144/195 (73.85%), Query Frame = 0


Query: 7   GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWAYS--- 66
           GFGYD+K +DFKVV+V+ F +   Y  P RVEIYDLSKDRWREIE P CG  FWA S   
Sbjct: 160 GFGYDSKSRDFKVVRVVNFVEGPGYFHPPRVEIYDLSKDRWREIETPICGHVFWAPSFEM 219

Query: 67  ---------ENLSETLEIIQTFDISEEVFGKILYPETMEGKVKDSNKSLGILNESIVLFD 126
                     + +E +EIIQ+FD+SEEVFG+I  PE+ E K ++  +SLG+LN SIVLF 
Sbjct: 220 YHEGTYYWWADTNEGVEIIQSFDMSEEVFGQISMPESFEEK-REKYRSLGVLNGSIVLFR 279

Query: 127 YPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVIL 186
           YP RG+E+ FDIW ME DEFG + WSKLL IGP+  IE PL+FVS+DELLM+ +EG+++L
Sbjct: 280 YPSRGDEREFDIWGMEKDEFGGVSWSKLLRIGPLRGIEKPLVFVSFDELLMEANEGQIVL 339

[Close]

BLAST of ClCG10G019800 vs. ExPASy TrEMBL
Match: A0A6J1J6Y5 (F-box protein CPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111482312 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 9.7e-54
Identity = 113/195 (57.95%), Postives = 141/195 (72.31%), Query Frame = 0


Query: 7   GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWAYS--- 66
           GFGYD+K KDFKVV+V+ F +   Y  P R EIYDLSKDRWREIE P CG  FWA S   
Sbjct: 160 GFGYDSKSKDFKVVRVVNFVEGPGYFHPPRAEIYDLSKDRWREIETPICGHVFWAPSFEM 219

Query: 67  ---------ENLSETLEIIQTFDISEEVFGKILYPETMEGKVKDSNKSLGILNESIVLFD 126
                     +  +  EIIQ+FD+SEEVF +I  PE+ EG+ ++  +S+GILN SIVLF 
Sbjct: 220 YHEGTYYWWADTDDKEEIIQSFDMSEEVFRRIPVPESFEGE-RERYRSMGILNGSIVLFH 279

Query: 127 YPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVIL 186
           YP RG+E+ FDIW ME DEFG + WSKLLTIGP+  IE PL+FVS DELLM+ +EG+++L
Sbjct: 280 YPSRGDEREFDIWGMEKDEFGGVSWSKLLTIGPLRGIEKPLVFVSSDELLMEANEGQIVL 339

[Close]

BLAST of ClCG10G019800 vs. ExPASy TrEMBL
Match: A0A6J1F5F2 (F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442473 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 7.7e-51
Identity = 113/211 (53.55%), Postives = 144/211 (68.25%), Query Frame = 0


Query: 7   GFGYDAKCKDFKVVKVIGFSDEL-YSFPSRVEIYDLSKDRWREIEAPGCG--FWAYSENL 66
           GFGYD+K KDFKVV+V+ F + + + +PSRVEIYDLSKDRWREIE P CG  FW  S  +
Sbjct: 161 GFGYDSKSKDFKVVRVVDFMEGVCHFYPSRVEIYDLSKDRWREIETPICGSVFWMPSFEM 220

Query: 67  ------------SETLEIIQTFDISEEVFGKILYPETMEGKVKDSNKSLGILNESIVLFD 126
                        E  EIIQ+FD+SEEVFG+I  PE+ + +     +S+G+LN SIVLF 
Sbjct: 221 YHEGTYYWWAKTGEGEEIIQSFDMSEEVFGRISMPESFK-RGDRMYRSMGVLNGSIVLFH 280

Query: 127 YPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVIL 186
           YP    EK F+IWEME DEFG + WSKLLTIGP+  I  PL+FV  +ELLM+  EG+V+L
Sbjct: 281 YPSEEGEKEFEIWEMEKDEFGGVSWSKLLTIGPLFGIGKPLVFVGSNELLMESIEGQVVL 340

Query: 187 YNIKTEQLKELPLKGLQIPESSNMLEVTFFL 203
           YN +T+QL+ELP+KG   PE     + T F+
Sbjct: 341 YNTRTKQLRELPMKG--NPEEFQATQATVFV 368

[Close]

BLAST of ClCG10G019800 vs. ExPASy TrEMBL
Match: A0A5A7UHP3 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold135G001510 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 8.0e-48
Identity = 102/195 (52.31%), Postives = 139/195 (71.28%), Query Frame = 0


Query: 7   GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWA----- 66
           GFGYD+K +DFKVV+V+ F +   Y +P +VE+YDLSK+RWREI+ P  G  FWA     
Sbjct: 160 GFGYDSKSRDFKVVRVVDFVEGPGYFYPPKVEVYDLSKERWREIQTPVSGHVFWAPCFEV 219

Query: 67  -------YSENLSETLEIIQTFDISEEVFGKILYPETMEGKVKDSNKSLGILNESIVLFD 126
                  +  +     EII TFD+SEEVFG+I  PE+ +G   D  +SLG+L+  IVLF 
Sbjct: 220 FHEGTYYWWADADGNTEIILTFDMSEEVFGQIPVPESFQG-TGDWYRSLGVLDGRIVLFH 279

Query: 127 YPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVIL 186
           YP RG+E+ FD+WEM  DE G + WSK+LTIGPVS IE PLLF+S +ELLM+ + G++I+
Sbjct: 280 YPSRGDERRFDMWEMGKDESGGVSWSKVLTIGPVSGIEKPLLFISSEELLMEGNGGQLIV 339

[Close]

BLAST of ClCG10G019800 vs. ExPASy TrEMBL
Match: A0A5D3DPN6 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007960 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 8.0e-48
Identity = 102/195 (52.31%), Postives = 139/195 (71.28%), Query Frame = 0


Query: 7   GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWA----- 66
           GFGYD+K +DFKVV+V+ F +   Y +P +VE+YDLSK+RWREI+ P  G  FWA     
Sbjct: 160 GFGYDSKSRDFKVVRVVDFVEGPGYFYPPKVEVYDLSKERWREIQTPVSGHVFWAPCFEV 219

Query: 67  -------YSENLSETLEIIQTFDISEEVFGKILYPETMEGKVKDSNKSLGILNESIVLFD 126
                  +  +     EII TFD+SEEVFG+I  PE+ +G   D  +SLG+L+  IVLF 
Sbjct: 220 FHEGTYYWWADADGNTEIILTFDMSEEVFGQIPVPESFQG-TGDWYRSLGVLDGCIVLFH 279

Query: 127 YPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVIL 186
           YP RG+E+ FD+WEM  DE G + WSK+LTIGPVS IE PLLF+S +ELLM+ + G++I+
Sbjct: 280 YPSRGDERRFDMWEMGKDESGGVSWSKVLTIGPVSGIEKPLLFISSEELLMEGNGGQLIV 339

[Close]

BLAST of ClCG10G019800 vs. TAIR 10
Match: AT5G41510.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 48.9 bits (115), Expect = 5.7e-06
Identity = 49/194 (25.26%), Postives = 72/194 (37.11%), Query Frame = 0


Query: 1   MQHLHTGFGYDAKCKDFKVVKVIGFSDELYSFPSR----VEIYDLSKDRWRE-------- 60
           + H     GY  K +    +K + F D  Y  P       EIYD     W          
Sbjct: 142 IDHFRYALGYADK-ESCSSLKFLRFLDYFYKAPEEEFFWYEIYDFDSGLWTTLNVTPHWG 201

Query: 61  -------IEAPGCGFWAYSENLSETL-EIIQTFDISEEVFGKILYPETMEGKVKDSNKSL 120
                  +   G  +W   E  ++   + I  FD + E FG +L   T     + S  SL
Sbjct: 202 IYSTCPCVSLKGNTYWPAKERSTQGFQDYIIRFDFTRERFGPLLALPTDR---ESSFVSL 261

Query: 121 GILNES--IVLFDYPFRGN--EKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVS 169
             + E     LF +    +  E  F+IW     E  ++ WSK L +    ++E PL F  
Sbjct: 262 SCVKEEKLAALFKHRLHHDSYEYEFEIWITTKIEVEMVSWSKFLRMDMRPKMELPLTFYI 321

The following BLAST results are available for this feature:

BLAST of ClCG10G019800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031737581.1	9.3e-59	58.11	F-box/kelch-repeat protein At3g23880-like [Cucumis sativus] >KGN59212.2 hypothet...	[more]
XP_038906036.1	1.0e-57	64.10	F-box protein CPR1-like [Benincasa hispida]	[more]
XP_004137986.3	6.7e-57	56.05	F-box protein CPR1-like [Cucumis sativus] >KGN59208.2 hypothetical protein Csa_0...	[more]
XP_022935692.1	6.2e-55	58.46	F-box protein CPR30-like [Cucurbita moschata]	[more]
XP_022983805.1	2.0e-53	57.95	F-box protein CPR1-like [Cucurbita maxima]	[more]

BLAST of ClCG10G019800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFS9	8.0e-05	25.26	Putative F-box protein At5g41510 OS=Arabidopsis thaliana OX=3702 GN=At5g41510 PE...	[more]

BLAST of ClCG10G019800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F6B1	3.0e-55	58.46	F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442474 PE=4 SV=1	[more]
A0A6J1J6Y5	9.7e-54	57.95	F-box protein CPR1-like OS=Cucurbita maxima OX=3661 GN=LOC111482312 PE=4 SV=1	[more]
A0A6J1F5F2	7.7e-51	53.55	F-box protein CPR30-like OS=Cucurbita moschata OX=3662 GN=LOC111442473 PE=4 SV=1	[more]
A0A5A7UHP3	8.0e-48	52.31	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5D3DPN6	8.0e-48	52.31	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of ClCG10G019800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41510.1	5.7e-06	25.26	F-box and associated interaction domains-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 3..175 e-value: 1.4E-12 score: 45.4
IPR006527	F-box associated domain, type 1	PFAM	PF07734	FBA_1	coord: 56..147 e-value: 1.5E-4 score: 21.8
None	No IPR available	PANTHER	PTHR47993:SF44	F-BOX PROTEIN CPR30-LIKE ISOFORM X1	coord: 6..194
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 6..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G019800.1	ClCG10G019800.1	mRNA