ClCG10G019000 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGAGAGAAGTTCAAGCGATTTCACGGAAGATGGATTTTCACGGCGCCGGTTCTTGTCTTCATCAATACTCCCTTCCTCCACCGCCATTTGAGGCTGTGAAAGCTCCGCCCGCTCAGAAAGGTGGAATCGAACAGGAACTTCACTCTCTGGTTTCGAGTTTTAGCGGAGGTTGCGAAGGAGGAAAACGCTCGGAATCGGATGTGCAGGAGTATGACGGAGCGGCAATGGAGGTTGCGGCGACGGCGACGGCGTCGGAGAAGGAGGAGGAGGAAGTTGGAAGGGAGAGGCTGAAGAGGCATCGGCGGGAGATGGCTGGCCGGGTCTGGATACCGGAGATATGGGGACAAGAGGAGCTTCTGAAGGATTGGATCGATTGCTCCGCCTTTGACGCTTGTTTATTTCCGACGGGAATCGGATCGGCGAGGGCGGCGCTGGTTGAAGAAGGAAGGAGAGCCAACAATGGCGGACTCACACTGGAGAACAGGTGCTGA ATGAGGAGAGAAGTTCAAGCGATTTCACGGAAGATGGATTTTCACGGCGCCGGTTCTTGTCTTCATCAATACTCCCTTCCTCCACCGCCATTTGAGGCTGTGAAAGCTCCGCCCGCTCAGAAAGGTGGAATCGAACAGGAACTTCACTCTCTGGTTTCGAGTTTTAGCGGAGGTTGCGAAGGAGGAAAACGCTCGGAATCGGATGTGCAGGAGTATGACGGAGCGGCAATGGAGGTTGCGGCGACGGCGACGGCGTCGGAGAAGGAGGAGGAGGAAGTTGGAAGGGAGAGGCTGAAGAGGCATCGGCGGGAGATGGCTGGCCGGGTCTGGATACCGGAGATATGGGGACAAGAGGAGCTTCTGAAGGATTGGATCGATTGCTCCGCCTTTGACGCTTGTTTATTTCCGACGGGAATCGGATCGGCGAGGGCGGCGCTGGTTGAAGAAGGAAGGAGAGCCAACAATGGCGGACTCACACTGGAGAACAGGTGCTGA ATGAGGAGAGAAGTTCAAGCGATTTCACGGAAGATGGATTTTCACGGCGCCGGTTCTTGTCTTCATCAATACTCCCTTCCTCCACCGCCATTTGAGGCTGTGAAAGCTCCGCCCGCTCAGAAAGGTGGAATCGAACAGGAACTTCACTCTCTGGTTTCGAGTTTTAGCGGAGGTTGCGAAGGAGGAAAACGCTCGGAATCGGATGTGCAGGAGTATGACGGAGCGGCAATGGAGGTTGCGGCGACGGCGACGGCGTCGGAGAAGGAGGAGGAGGAAGTTGGAAGGGAGAGGCTGAAGAGGCATCGGCGGGAGATGGCTGGCCGGGTCTGGATACCGGAGATATGGGGACAAGAGGAGCTTCTGAAGGATTGGATCGATTGCTCCGCCTTTGACGCTTGTTTATTTCCGACGGGAATCGGATCGGCGAGGGCGGCGCTGGTTGAAGAAGGAAGGAGAGCCAACAATGGCGGACTCACACTGGAGAACAGGTGCTGA MRREVQAISRKMDFHGAGSCLHQYSLPPPPFEAVKAPPAQKGGIEQELHSLVSSFSGGCEGGKRSESDVQEYDGAAMEVAATATASEKEEEEVGRERLKRHRREMAGRVWIPEIWGQEELLKDWIDCSAFDACLFPTGIGSARAALVEEGRRANNGGLTLENRC Homology
BLAST of ClCG10G019000 vs. NCBI nr
Match: XP_038903496.1 (protein BIC1 [Benincasa hispida]) HSP 1 Score: 295.0 bits (754), Expect = 3.9e-76 Identity = 150/165 (90.91%), Postives = 152/165 (92.12%), Query Frame = 0
BLAST of ClCG10G019000 vs. NCBI nr
Match: XP_011652011.2 (uncharacterized protein LOC105434972 [Cucumis sativus] >KAE8651089.1 hypothetical protein Csa_001819 [Cucumis sativus]) HSP 1 Score: 249.6 bits (636), Expect = 1.9e-62 Identity = 129/158 (81.65%), Postives = 134/158 (84.81%), Query Frame = 0
BLAST of ClCG10G019000 vs. NCBI nr
Match: XP_008442840.1 (PREDICTED: uncharacterized protein LOC103486607 [Cucumis melo] >KAA0043885.1 protein BIC1-like [Cucumis melo var. makuwa] >TYK25252.1 protein BIC1-like [Cucumis melo var. makuwa]) HSP 1 Score: 248.8 bits (634), Expect = 3.2e-62 Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0
BLAST of ClCG10G019000 vs. NCBI nr
Match: XP_022983147.1 (protein BIC1-like [Cucurbita maxima]) HSP 1 Score: 239.6 bits (610), Expect = 1.9e-59 Identity = 126/164 (76.83%), Postives = 132/164 (80.49%), Query Frame = 0
BLAST of ClCG10G019000 vs. NCBI nr
Match: XP_023528325.1 (protein BIC1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 239.6 bits (610), Expect = 1.9e-59 Identity = 126/164 (76.83%), Postives = 134/164 (81.71%), Query Frame = 0
BLAST of ClCG10G019000 vs. ExPASy Swiss-Prot
Match: Q9LXJ1 (Protein BIC1 OS=Arabidopsis thaliana OX=3702 GN=BIC1 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.3e-26 Identity = 56/80 (70.00%), Postives = 63/80 (78.75%), Query Frame = 0
BLAST of ClCG10G019000 vs. ExPASy Swiss-Prot
Match: Q9M280 (Protein BIC2 OS=Arabidopsis thaliana OX=3702 GN=BIC2 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10 Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 0
BLAST of ClCG10G019000 vs. ExPASy TrEMBL
Match: A0A5A7TR64 (Protein BIC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003850 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.5e-62 Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0
BLAST of ClCG10G019000 vs. ExPASy TrEMBL
Match: A0A1S3B6P7 (uncharacterized protein LOC103486607 OS=Cucumis melo OX=3656 GN=LOC103486607 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.5e-62 Identity = 128/156 (82.05%), Postives = 132/156 (84.62%), Query Frame = 0
BLAST of ClCG10G019000 vs. ExPASy TrEMBL
Match: A0A0A0LAW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G776900 PE=4 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 3.4e-62 Identity = 128/157 (81.53%), Postives = 133/157 (84.71%), Query Frame = 0
BLAST of ClCG10G019000 vs. ExPASy TrEMBL
Match: A0A6J1IYG7 (protein BIC1-like OS=Cucurbita maxima OX=3661 GN=LOC111481785 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 9.3e-60 Identity = 126/164 (76.83%), Postives = 132/164 (80.49%), Query Frame = 0
BLAST of ClCG10G019000 vs. ExPASy TrEMBL
Match: A0A6J1F7F9 (protein BIC1-like OS=Cucurbita moschata OX=3662 GN=LOC111441546 PE=4 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 8.2e-56 Identity = 122/164 (74.39%), Postives = 130/164 (79.27%), Query Frame = 0
BLAST of ClCG10G019000 vs. TAIR 10
Match: AT3G52740.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44450.1); Has 65 Blast hits to 65 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 120.9 bits (302), Expect = 9.3e-28 Identity = 56/80 (70.00%), Postives = 63/80 (78.75%), Query Frame = 0
BLAST of ClCG10G019000 vs. TAIR 10
Match: AT3G44450.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52740.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-11 Identity = 32/56 (57.14%), Postives = 41/56 (73.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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