ClCG10G018560 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G018560
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Protein GL2-INTERACTING REPRESSOR 1
Location	CG_Chr10: 33590598 .. 33591697 (-)
RNA-Seq Expression	ClCG10G018560
Synteny	ClCG10G018560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAGTAAGGACCCTTTCCCTTTTCTTTTAAAATTCCGTAATTACTTTGCTGCATTTTTTTAATTTCCCACATTAATTCATTTTCCTGCCCCCCCTTAAATTAATTTACACTCTCTGCCACCCATTTCCACAAAATTCAATTCTCTCTCTCTAAATTAATGAGAGAGAAAAAAAAAAAAAAAAAAGAACAACCCCTTTCTCTCTCTCTTCTTCTTCTTTCTTTTGCCTCCCACTTTCCCACTTTCGTTTCCTTATATAAATCATTCCCCGGAGTCCTATGTTTGCCACAAACTCACTCACATTTTCTCAACTTCCTCCGCCTTCCTCCGCCGCCATCACCGCCGTCTGGTTTTCAAAACTTCAAGGTATATATGCAAATGCATATTTCAAAGTTTTTCAACTTCTGTTTTTTCTTTCTCCATTGCTATTTTATGAATTGGGTTTCTTTTTTCTTTTGAATGTTTTGAAATTTATAAGTAGACTATTATATAAAATTGGAGGAAACGACATTACAAGATTCAAGTTCTAACTCAAGCTCTGTTTTTCTTACATTCTGAAACAGGGGAGGAAATGCCGTTTTCCTTTCCTTCCATTGCTCTCGTTAAAATAGCTCAAATTGACTGTTTAAGACTTAAGTTCATAGTTTACGTTTAATTATATTTATAAATTCCGACAAATTTATTTATTTGTTTGTTTTTTTCTATATTAACAGAGGAGAAGAAAAGTAGGAGACAATGAGCAGAAGAAGCAGTGGAAGTGTTCCAAAGCTTGAGTTGAAGCTGAACCTGTCGCCGCCGCGGCCACATCCGATGGTGTCATCGCCGAGCCGATCAGCGACAGCGTCGCCCACATCGCCACCGAGCTCTTGCGTGTCGTCGGAGCTAAATCAGGAAGACGGCGGCGCCGCCCTTCGATACTCAAGCAGCCCAGAAGCTACATCAATGGTGCTGGTGGGGTGCCCTCGGTGCCTCATGTACGTGATGCTGTCGGAGAACGAACCCAAATGCCCAAAATGCAAGAGCTCTGTTTTGCTTGATTTTCTCCATGACGGCGCCGCCTCAGCTCCGCCGTCCACGACCGCCGCCAGGAAGATCTAG

mRNA sequence

ATGAAGATCCTATGTTTGCCACAAACTCACTCACATTTTCTCAACTTCCTCCGCCTTCCTCCGCCGCCATCACCGCCGTCTGGTTTTCAAAACTTCAAGGAGACAATGAGCAGAAGAAGCAGTGGAAGTGTTCCAAAGCTTGAGTTGAAGCTGAACCTGTCGCCGCCGCGGCCACATCCGATGGTGTCATCGCCGAGCCGATCAGCGACAGCGTCGCCCACATCGCCACCGAGCTCTTGCGTGTCGTCGGAGCTAAATCAGGAAGACGGCGGCGCCGCCCTTCGATACTCAAGCAGCCCAGAAGCTACATCAATGGTGCTGGTGGGGTGCCCTCGGTGCCTCATGTACGTGATGCTGTCGGAGAACGAACCCAAATGCCCAAAATGCAAGAGCTCTGTTTTGCTTGATTTTCTCCATGACGGCGCCGCCTCAGCTCCGCCGTCCACGACCGCCGCCAGGAAGATCTAG

Coding sequence (CDS)

ATGAAGATCCTATGTTTGCCACAAACTCACTCACATTTTCTCAACTTCCTCCGCCTTCCTCCGCCGCCATCACCGCCGTCTGGTTTTCAAAACTTCAAGGAGACAATGAGCAGAAGAAGCAGTGGAAGTGTTCCAAAGCTTGAGTTGAAGCTGAACCTGTCGCCGCCGCGGCCACATCCGATGGTGTCATCGCCGAGCCGATCAGCGACAGCGTCGCCCACATCGCCACCGAGCTCTTGCGTGTCGTCGGAGCTAAATCAGGAAGACGGCGGCGCCGCCCTTCGATACTCAAGCAGCCCAGAAGCTACATCAATGGTGCTGGTGGGGTGCCCTCGGTGCCTCATGTACGTGATGCTGTCGGAGAACGAACCCAAATGCCCAAAATGCAAGAGCTCTGTTTTGCTTGATTTTCTCCATGACGGCGCCGCCTCAGCTCCGCCGTCCACGACCGCCGCCAGGAAGATCTAG

Protein sequence

MKILCLPQTHSHFLNFLRLPPPPSPPSGFQNFKETMSRRSSGSVPKLELKLNLSPPRPHPMVSSPSRSATASPTSPPSSCVSSELNQEDGGAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI

Homology

[Close]

BLAST of ClCG10G018560 vs. NCBI nr
Match: XP_022983148.1 (uncharacterized protein LOC111481787 [Cucurbita maxima])

HSP 1 Score: 238.0 bits (606), Expect = 5.3e-59
Identity = 125/146 (85.62%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 14  LNFLRLPPPPSPPSGFQNFK----ETMSRRSSGSVPKLELKLNLSPPRPHPMVSSPSRSA 73
           L F   PPPPSPPS FQNFK    E MSRRSSGSVPKL+LKLNLSPPR HP+ SSPSRSA
Sbjct: 7   LTFSHPPPPPSPPSSFQNFKRLEEEKMSRRSSGSVPKLDLKLNLSPPRQHPLGSSPSRSA 66

Query: 74  TASPTSPPSSCVSSELNQEDGGAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 133
           T SPTSPPSSCVS ELNQ+D  AALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC
Sbjct: 67  TLSPTSPPSSCVSLELNQDDSSAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 126

Query: 134 KSSVLLDFLHDGAASAPPSTTAARKI 156
           KSSVLLDFLHDGAAS PPST AARKI
Sbjct: 127 KSSVLLDFLHDGAASGPPSTAAARKI 152

[Close]

BLAST of ClCG10G018560 vs. NCBI nr
Match: XP_023528090.1 (early nodulin-20-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.7 bits (605), Expect = 6.9e-59
Identity = 125/146 (85.62%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 14  LNFLRLPPPPSPPSGFQNFK----ETMSRRSSGSVPKLELKLNLSPPRPHPMVSSPSRSA 73
           L F   PPPPSPPS FQ+FK    E MSRRSSGSVPKLELKLNLSPPR HP+ SSPSRSA
Sbjct: 7   LTFSHPPPPPSPPSAFQHFKVLEEEKMSRRSSGSVPKLELKLNLSPPRQHPLGSSPSRSA 66

Query: 74  TASPTSPPSSCVSSELNQEDGGAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 133
           T SPTSPPSSCVS ELNQ+D GAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC
Sbjct: 67  TLSPTSPPSSCVSLELNQDDSGAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 126

Query: 134 KSSVLLDFLHDGAASAPPSTTAARKI 156
           KSSVLLDFLHDGAAS PPST AARK+
Sbjct: 127 KSSVLLDFLHDGAASGPPSTGAARKM 152

[Close]

BLAST of ClCG10G018560 vs. NCBI nr
Match: XP_023528091.1 (uncharacterized protein LOC111791110 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 237.7 bits (605), Expect = 6.9e-59
Identity = 125/146 (85.62%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 14  LNFLRLPPPPSPPSGFQNFK----ETMSRRSSGSVPKLELKLNLSPPRPHPMVSSPSRSA 73
           L F   PPPPSPPS FQ+FK    E MSRRSSGSVPKLELKLNLSPPR HP+ SSPSRSA
Sbjct: 7   LTFSHPPPPPSPPSAFQHFKXLEEEKMSRRSSGSVPKLELKLNLSPPRQHPLGSSPSRSA 66

Query: 74  TASPTSPPSSCVSSELNQEDGGAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 133
           T SPTSPPSSCVS ELNQ+D GAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC
Sbjct: 67  TLSPTSPPSSCVSLELNQDDSGAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 126

Query: 134 KSSVLLDFLHDGAASAPPSTTAARKI 156
           KSSVLLDFLHDGAAS PPST AARK+
Sbjct: 127 KSSVLLDFLHDGAASGPPSTGAARKM 152

[Close]

BLAST of ClCG10G018560 vs. NCBI nr
Match: KAG6580726.1 (Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236.9 bits (603), Expect = 1.2e-58
Identity = 124/146 (84.93%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 14  LNFLRLPPPPSPPSGFQNFK----ETMSRRSSGSVPKLELKLNLSPPRPHPMVSSPSRSA 73
           L F + PPPPSPPS FQ+FK    E MSRRSSGSVPKLELKLNLSPPR HP+ SSPSRSA
Sbjct: 7   LTFSQPPPPPSPPSAFQHFKRLEEEKMSRRSSGSVPKLELKLNLSPPRQHPLGSSPSRSA 66

Query: 74  TASPTSPPSSCVSSELNQEDGGAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 133
           T SPTSPPSSCVS ELNQ+D  AALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC
Sbjct: 67  TLSPTSPPSSCVSLELNQDDSSAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 126

Query: 134 KSSVLLDFLHDGAASAPPSTTAARKI 156
           KSSVLLDFLHDGAAS PPST AARK+
Sbjct: 127 KSSVLLDFLHDGAASGPPSTAAARKL 152

[Close]

BLAST of ClCG10G018560 vs. NCBI nr
Match: KAG7017480.1 (hypothetical protein SDJN02_19345, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236.9 bits (603), Expect = 1.2e-58
Identity = 124/146 (84.93%), Postives = 129/146 (88.36%), Query Frame = 0


Query: 14  LNFLRLPPPPSPPSGFQNFK----ETMSRRSSGSVPKLELKLNLSPPRPHPMVSSPSRSA 73
           L F + PPPPSPPS FQ+FK    E MSRRSSGSVPKLELKLNLSPPR HP+ SSPSRSA
Sbjct: 7   LTFSQPPPPPSPPSAFQHFKRLEEEKMSRRSSGSVPKLELKLNLSPPRQHPLGSSPSRSA 66

Query: 74  TASPTSPPSSCVSSELNQEDGGAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 133
           T SPTSPPSSCVS ELNQ+D  AALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC
Sbjct: 67  TLSPTSPPSSCVSLELNQDDSSAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 126

Query: 134 KSSVLLDFLHDGAASAPPSTTAARKI 156
           KSSVLLDFLHDGAAS PPST AARK+
Sbjct: 127 KSSVLLDFLHDGAASGPPSTAAARKL 152

[Close]

BLAST of ClCG10G018560 vs. ExPASy Swiss-Prot
Match: Q9FNI1 (Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.0e-36
Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 36  MSRRSSGSVPKLELKLNLSPP--RPHPMVSSPSRSATASPTSPPSSCVSSELNQEDGGAA 95
           MSRRS    PKLELKLNLSPP      MV SPSRSAT SPTSPPSSCVSSE+NQ++   +
Sbjct: 1   MSRRS----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE--PS 60

Query: 96  LRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAA 153
           +RYS+SPE TSMVLVGCPRCLMYVMLSE++PKCPKCKS+VLLDFLH+ A +A  +  AA
Sbjct: 61  VRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAA 113

[Close]

BLAST of ClCG10G018560 vs. ExPASy Swiss-Prot
Match: Q9SRN4 (Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.4e-24
Identity = 67/116 (57.76%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 36  MSRRSSGSVPKLELKLNLSPPRPHPMVSSPSRSATASPTSPPSSCVSSELNQEDGGAALR 95
           MSRR+    PKLEL+LNLSPP       S  RS   S T+ PSSCVSSE NQE+      
Sbjct: 1   MSRRNKNG-PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEE------ 60

Query: 96  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTA 152
              +   TSMVLVGCPRCLMYVMLS+++PKCPKCKS+VLLDFL + A +A  +T A
Sbjct: 61  ---NETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTATAA 106

[Close]

BLAST of ClCG10G018560 vs. ExPASy Swiss-Prot
Match: Q9FMS4 (Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 GN=SIED1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.3e-09
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 47  LELKLNLSPPRPHPMVSSPSRSATASPTSPPSSCVSSELNQEDGGAALRYSSSPEATSMV 106
           L+LKLN+SP     +++  S S+  S              + +GG         EA SMV
Sbjct: 11  LDLKLNISPSLDSSLLTESSSSSLCS-------------EEAEGGGG-------EAKSMV 70

Query: 107 LVGCPRCLMYVMLS-ENEPKCPKCKSSVLLDFL 139
           +VGCP C+MY++ S EN+P+CP+C S VLLDFL
Sbjct: 71  VVGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of ClCG10G018560 vs. ExPASy TrEMBL
Match: A0A6J1J6Y2 (uncharacterized protein LOC111481787 OS=Cucurbita maxima OX=3661 GN=LOC111481787 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.6e-59
Identity = 125/146 (85.62%), Postives = 128/146 (87.67%), Query Frame = 0


Query: 14  LNFLRLPPPPSPPSGFQNFK----ETMSRRSSGSVPKLELKLNLSPPRPHPMVSSPSRSA 73
           L F   PPPPSPPS FQNFK    E MSRRSSGSVPKL+LKLNLSPPR HP+ SSPSRSA
Sbjct: 7   LTFSHPPPPPSPPSSFQNFKRLEEEKMSRRSSGSVPKLDLKLNLSPPRQHPLGSSPSRSA 66

Query: 74  TASPTSPPSSCVSSELNQEDGGAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 133
           T SPTSPPSSCVS ELNQ+D  AALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC
Sbjct: 67  TLSPTSPPSSCVSLELNQDDSSAALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKC 126

Query: 134 KSSVLLDFLHDGAASAPPSTTAARKI 156
           KSSVLLDFLHDGAAS PPST AARKI
Sbjct: 127 KSSVLLDFLHDGAASGPPSTAAARKI 152

[Close]

BLAST of ClCG10G018560 vs. ExPASy TrEMBL
Match: A0A5A7TLW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23737G00010 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 9.1e-57
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 36  MSRRSSGSVPKLELKLNLSPPRPHPMVSSPSRSATASPTSPPSSCVSSELNQEDGGAALR 95
           MSRRSSGSVPKLELKLNLSPPRPHP+VSSPSRSAT SPTSPPSSCVSSELNQ+DGGAALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 96  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 155
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120

[Close]

BLAST of ClCG10G018560 vs. ExPASy TrEMBL
Match: A0A1S3B7J8 (uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 9.1e-57
Identity = 117/120 (97.50%), Postives = 119/120 (99.17%), Query Frame = 0


Query: 36  MSRRSSGSVPKLELKLNLSPPRPHPMVSSPSRSATASPTSPPSSCVSSELNQEDGGAALR 95
           MSRRSSGSVPKLELKLNLSPPRPHP+VSSPSRSAT SPTSPPSSCVSSELNQ+DGGAALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAALR 60

Query: 96  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 155
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120

[Close]

BLAST of ClCG10G018560 vs. ExPASy TrEMBL
Match: A0A0A0LBI1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.7e-56
Identity = 116/120 (96.67%), Postives = 118/120 (98.33%), Query Frame = 0


Query: 36  MSRRSSGSVPKLELKLNLSPPRPHPMVSSPSRSATASPTSPPSSCVSSELNQEDGGAALR 95
           MSRRSSGSVPKLELKLNLSPPRPHP+VSSPSRSAT SPTSPPSSCVSSELNQ+DGGA LR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRPHPLVSSPSRSATVSPTSPPSSCVSSELNQDDGGAGLR 60

Query: 96  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 155
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 120

[Close]

BLAST of ClCG10G018560 vs. ExPASy TrEMBL
Match: A0A6J1F871 (uncharacterized protein LOC111441745 OS=Cucurbita moschata OX=3662 GN=LOC111441745 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.5e-51
Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 0


Query: 36  MSRRSSGSVPKLELKLNLSPPRPHPMVSSPSRSATASPTSPPSSCVSSELNQEDGGAALR 95
           MSRRSSGSVPKLELKLNLSPPR HP+ SSPSRSAT SPTSPPSSCVS ELNQ+D  AALR
Sbjct: 1   MSRRSSGSVPKLELKLNLSPPRQHPLGSSPSRSATLSPTSPPSSCVSLELNQDDSSAALR 60

Query: 96  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAARKI 155
           YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAAS PPST AARK+
Sbjct: 61  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASGPPSTAAARKL 120

[Close]

BLAST of ClCG10G018560 vs. TAIR 10
Match: AT5G06270.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 152.1 bits (383), Expect = 3.6e-37
Identity = 85/119 (71.43%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 36  MSRRSSGSVPKLELKLNLSPP--RPHPMVSSPSRSATASPTSPPSSCVSSELNQEDGGAA 95
           MSRRS    PKLELKLNLSPP      MV SPSRSAT SPTSPPSSCVSSE+NQ++   +
Sbjct: 1   MSRRS----PKLELKLNLSPPTSSQRRMVRSPSRSATTSPTSPPSSCVSSEMNQDE--PS 60

Query: 96  LRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTAA 153
           +RYS+SPE TSMVLVGCPRCLMYVMLSE++PKCPKCKS+VLLDFLH+ A +A  +  AA
Sbjct: 61  VRYSTSPETTSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLHENATNANANAAAA 113

[Close]

BLAST of ClCG10G018560 vs. TAIR 10
Match: AT3G11600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 2.4e-25
Identity = 67/116 (57.76%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 36  MSRRSSGSVPKLELKLNLSPPRPHPMVSSPSRSATASPTSPPSSCVSSELNQEDGGAALR 95
           MSRR+    PKLEL+LNLSPP       S  RS   S T+ PSSCVSSE NQE+      
Sbjct: 1   MSRRNKNG-PKLELRLNLSPPPSQASQMSLVRSPNRSNTTSPSSCVSSETNQEE------ 60

Query: 96  YSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLLDFLHDGAASAPPSTTA 152
              +   TSMVLVGCPRCLMYVMLS+++PKCPKCKS+VLLDFL + A +A  +T A
Sbjct: 61  ---NETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQENAFAATTATAA 106

[Close]

BLAST of ClCG10G018560 vs. TAIR 10
Match: AT5G22270.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits to 136 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 1.7e-10
Identity = 38/93 (40.86%), Postives = 53/93 (56.99%), Query Frame = 0


Query: 47  LELKLNLSPPRPHPMVSSPSRSATASPTSPPSSCVSSELNQEDGGAALRYSSSPEATSMV 106
           L+LKLN+SP     +++  S S+  S              + +GG         EA SMV
Sbjct: 11  LDLKLNISPSLDSSLLTESSSSSLCS-------------EEAEGGGG-------EAKSMV 70

Query: 107 LVGCPRCLMYVMLS-ENEPKCPKCKSSVLLDFL 139
           +VGCP C+MY++ S EN+P+CP+C S VLLDFL
Sbjct: 71  VVGCPNCIMYIITSLENDPRCPRCNSHVLLDFL 83

[Close]

BLAST of ClCG10G018560 vs. TAIR 10
Match: AT3G52561.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 2.1e-05
Identity = 26/73 (35.62%), Postives = 43/73 (58.90%), Query Frame = 0


Query: 67  RSATASPTSPPSSCV--SSELNQEDGGAALRYSSSPEATSMVLVGCPRCLMYVMLSENEP 126
           RS ++  +S  +SC+  + E+ +E    A  +    EA  MV++GC  C+MYVM+ +   
Sbjct: 30  RSPSSDTSSSQNSCLTRTEEVKEE---VASSWVDEEEAPEMVVMGCRSCMMYVMVLQERQ 89

Query: 127 KCPKCKSSVLLDF 138
           +CPKCK + L+ F
Sbjct: 90  RCPKCKCTDLIFF 99

[Close]

BLAST of ClCG10G018560 vs. TAIR 10
Match: AT1G16500.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G79160.1); Has 136 Blast hits to 134 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 131; Viruses - 1; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 8.0e-05
Identity = 38/104 (36.54%), Postives = 52/104 (50.00%), Query Frame = 0


Query: 47  LELKL---NLSPPRPHPMVS-SPSRSATASPTSPPSSCVSSELNQ-----------EDGG 106
           LELKL   ++S P P P+ S SP++S +   +      V   L +           ED G
Sbjct: 142 LELKLVPSSISRPLPPPLSSFSPNQSLSYLSSVCTLDKVKLALERAEKDTKKRQSPEDDG 201

Query: 107 AALRYSSSPEATSMVLVGCPRCLMYVMLSENEPKCPKCKSSVLL 136
                +S+  A S V  GCP CL YV +++N PKCP+C S V L
Sbjct: 202 VYDGTASATVAASQVAAGCPGCLSYVFVAKNNPKCPRCHSFVPL 245

The following BLAST results are available for this feature:

BLAST of ClCG10G018560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983148.1	5.3e-59	85.62	uncharacterized protein LOC111481787 [Cucurbita maxima]	[more]
XP_023528090.1	6.9e-59	85.62	early nodulin-20-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023528091.1	6.9e-59	85.62	uncharacterized protein LOC111791110 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG6580726.1	1.2e-58	84.93	Protein salt-induced and EIN3/EIL1-dependent 1, partial [Cucurbita argyrosperma ...	[more]
KAG7017480.1	1.2e-58	84.93	hypothetical protein SDJN02_19345, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of ClCG10G018560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNI1	5.0e-36	71.43	Protein GL2-INTERACTING REPRESSOR 1 OS=Arabidopsis thaliana OX=3702 GN=GIR1 PE=1...	[more]
Q9SRN4	3.4e-24	57.76	Protein GL2-INTERACTING REPRESSOR 2 OS=Arabidopsis thaliana OX=3702 GN=GIR2 PE=1...	[more]
Q9FMS4	2.3e-09	40.86	Protein salt-induced and EIN3/EIL1-dependent 1 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of ClCG10G018560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J6Y2	2.6e-59	85.62	uncharacterized protein LOC111481787 OS=Cucurbita maxima OX=3661 GN=LOC111481787...	[more]
A0A5A7TLW3	9.1e-57	97.50	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B7J8	9.1e-57	97.50	uncharacterized protein LOC103486655 OS=Cucumis melo OX=3656 GN=LOC103486655 PE=...	[more]
A0A0A0LBI1	2.7e-56	96.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778340 PE=4 SV=1	[more]
A0A6J1F871	1.5e-51	90.83	uncharacterized protein LOC111441745 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]

BLAST of ClCG10G018560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06270.1	3.6e-37	71.43	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G11600.1	2.4e-25	57.76	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]
AT5G22270.1	1.7e-10	40.86	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52561.1	2.1e-05	35.62	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G16500.1	8.0e-05	36.54	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..86
None	No IPR available	PANTHER	PTHR33177	PUTATIVE-RELATED	coord: 31..151
None	No IPR available	PANTHER	PTHR33177:SF47	BNAC02G02040D PROTEIN	coord: 31..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G018560.2	ClCG10G018560.2	mRNA