ClCG10G012890 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G012890
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Phytocyanin domain-containing protein
Location	CG_Chr10: 26938892 .. 26940594 (-)
RNA-Seq Expression	ClCG10G012890
Synteny	ClCG10G012890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGCCTCGCCGCATCTCATTGCCTTCTTCCTCCTCCTCTGCGCCGCCGTCACGCTCTTCCCCGTCTCCGCCACCGACCACATTGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAATAATCACACCTTCTACGTTGGCGATTTCATCTGTAAGTTATAAATCCTCTTTCTCTCTCTCTCTCTACACTAAAGTTTTGTATGGATCTTTCCAGAGGGGAAGTTTTAGAAGCTTTTTATTTGTGTTCTAATCTTTTGAATTCAATGAAAAGCATGAATCACGTGTTATTCCCATTTTGAGAGATCAAACGTTCGAATTCTCATCCTTAGTTACAATGTTGTATTCTTGGAAGATAAAGGAGTAGCCCAATGAGCAATTGTCAACTCCTTCCTTTCTCTGCCCTACCCTAGTAAGTTAATGTAAATAATAAATGACTTAGAAAGAACAACGAACGAAATTATCTCTTGTAGTCACTTGTTTAAGGTTTAGGCAGTAGTGTGGACTCTTGACTAACCAGCAAAATTGAAGGCAAAAATTGAAGGTAGTAGAGTTAAATAGTTTTCTCTTGAGAATAATAGTGGTGTCAATAAGTTGACGGATATTACGGATATTACTTGATATTAGTAGTTTTGTTGCATTGCAAAGTCGAAGGTAGCAGAGTCAAATAGTTGTCTCTTGAGAATAATAATGGTGCGGACAAGTTGACTAAAATACTCACAGACTTTACTTGGTAACTGTAGGTGTAACTTTGTTGCATTGCAAATGGTTATTGATAGGGAGAAAGTTAGGAAAGATAAAAGTTATGTATAATTTTTGGAAGTTAGTTTAGAGTGGATTTGCGGTGGTAACTAGAAAGACAGCTCTCCACTAAACTATAGTGTAATATAGGGGTGATCATCGGTCGACCAGCGTCGTTTCTTGGCTCAAACTGATGCTGACCATCGATACTTAAATGTCCATCGGTTTTGACGAAGATGGTAACGTCAACCGACCAACTGCTCAGTCGGTTGGCCGACTTTTATGTTTCATGTCTCCGACGAGCTAGCTGGAAAAAAAAAAATGGAGGAGAGATCAAAAGCTAAAAAAGTAGCAAAAGCGATGTTTTCGTTCCATGCTCGATCGGTTTGAGCCTCTTTGGGCAAATCGGCCGGCCAACCTCCAACCAAAGTATGTATAAATCCGGCCACCGAAGTTGGTTTGGTCGGTTTTAGTTGGCGGGCTCGATTTTCTGTTCTTCCTTTCTCACCCTGGTGTAATGTCCCTTTTGATATTGAAGTATAGTTAGTGATAAATTATCCTAAGTCCTAACGCCTTGCTACGGAACCAAATATTTGGCAGCATTTAGGTATCAGAAGAACCAATACAACGTGTTTGAGGTGAACCAATCAGGATACGACAACTGCACCACAGACGGGGCGTTAGGGAATTGGAGCGGTGGCAAGGACTTCATCCCTCTCAACAAGGCTCAGAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGAATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCCCTCGCCACCGAGCATCCTTCGCCCTCCTCCGCCACAGCCCGGGCGGGTTCTCGACAGTGGCAGATTCGTGCTCTGCTCATCTCTCTGGCTTTGATTTGGTTTGGATCTGACTGGATTTAG

mRNA sequence

ATGCCGGCCTCGCCGCATCTCATTGCCTTCTTCCTCCTCCTCTGCGCCGCCGTCACGCTCTTCCCCGTCTCCGCCACCGACCACATTGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAATAATCACACCTTCTACGTTGGCGATTTCATCTCATTTAGGTATCAGAAGAACCAATACAACGTGTTTGAGGTGAACCAATCAGGATACGACAACTGCACCACAGACGGGGCGTTAGGGAATTGGAGCGGTGGCAAGGACTTCATCCCTCTCAACAAGGCTCAGAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGAATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCCCTCGCCACCGAGCATCCTTCGCCCTCCTCCGCCACAGCCCGGGCGGGTTCTCGACAGTGGCAGATTCGTGCTCTGCTCATCTCTCTGGCTTTGATTTGGTTTGGATCTGACTGGATTTAG

Coding sequence (CDS)

ATGCCGGCCTCGCCGCATCTCATTGCCTTCTTCCTCCTCCTCTGCGCCGCCGTCACGCTCTTCCCCGTCTCCGCCACCGACCACATTGTCGGCGCCAACCGCGGCTGGAACCCCGGCATCAACTACACTCTCTGGGCTAATAATCACACCTTCTACGTTGGCGATTTCATCTCATTTAGGTATCAGAAGAACCAATACAACGTGTTTGAGGTGAACCAATCAGGATACGACAACTGCACCACAGACGGGGCGTTAGGGAATTGGAGCGGTGGCAAGGACTTCATCCCTCTCAACAAGGCTCAGAGGTACTACTTCATTTGTGGCAATGGACAGTGTTTTAATGGAATGAAGGTGACCATTCTTGTTCATCCTCTTCCTCCTCCTCCATCTTCTCCCCTCGCCACCGAGCATCCTTCGCCCTCCTCCGCCACAGCCCGGGCGGGTTCTCGACAGTGGCAGATTCGTGCTCTGCTCATCTCTCTGGCTTTGATTTGGTTTGGATCTGACTGGATTTAG

Protein sequence

MPASPHLIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFRYQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI

Homology

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BLAST of ClCG10G012890 vs. NCBI nr
Match: XP_038903873.1 (lamin-like protein [Benincasa hispida])

HSP 1 Score: 334.7 bits (857), Expect = 4.6e-88
Identity = 155/169 (91.72%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 3   ASPHLIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFRYQ 62
           ASPHL+AFFLLLCAAV++FPVSATDHIVGANRGWNPGINYTLWANNHTFYVGD ISFRYQ
Sbjct: 4   ASPHLLAFFLLLCAAVSVFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQ 63

Query: 63  KNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMKVTILV 122
           KNQYNVFEVNQSGYDNCTT+GALGNWS GKDFIPL KAQRYYFICGNGQCFNGMKVT+LV
Sbjct: 64  KNQYNVFEVNQSGYDNCTTEGALGNWSSGKDFIPLQKAQRYYFICGNGQCFNGMKVTVLV 123

Query: 123 HPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 172
           HPLPPPPSSPL TEH SPSSATA  GS+QW+IRALLISLALIWFGSDWI
Sbjct: 124 HPLPPPPSSPLGTEHSSPSSATAPEGSQQWRIRALLISLALIWFGSDWI 172

[Close]

BLAST of ClCG10G012890 vs. NCBI nr
Match: XP_023526524.1 (lamin-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.3 bits (856), Expect = 6.0e-88
Identity = 154/171 (90.06%), Postives = 162/171 (94.74%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFR 60
           MPASPHL+AFFLLLC A ++FPVSATDHIVGANRGWNPGINYTLWANNHTF+VGD ISFR
Sbjct: 1   MPASPHLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQSGYDNCTT+GA GNWS GKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 172
           LVHPLPPPPSSPLA++  SPSSAT R GSRQWQIRALL+SLALIWFGSDWI
Sbjct: 121 LVHPLPPPPSSPLASKDSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 171

[Close]

BLAST of ClCG10G012890 vs. NCBI nr
Match: XP_022934432.1 (lamin-like protein [Cucurbita moschata])

HSP 1 Score: 329.7 bits (844), Expect = 1.5e-86
Identity = 152/171 (88.89%), Postives = 160/171 (93.57%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFR 60
           MPASP L+AFFLLLC A ++FPVSATDHIVGANRGWNPGINYTLWANNHTF+VGD ISFR
Sbjct: 1   MPASPQLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQSGYDNCTT+GA GNWS GKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 172
           LVHPLPPPPSSPLA++  SPSSAT R GSRQWQIRAL +SLALIWFGSDWI
Sbjct: 121 LVHPLPPPPSSPLASKDSSPSSATPRTGSRQWQIRALFVSLALIWFGSDWI 171

[Close]

BLAST of ClCG10G012890 vs. NCBI nr
Match: KAG7018121.1 (Lamin-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 329.7 bits (844), Expect = 1.5e-86
Identity = 152/171 (88.89%), Postives = 161/171 (94.15%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFR 60
           MPASP L+AFFLLLC A ++FPVSATDHIVGANRGWNPGINYTLWANNHTF+VGD ISFR
Sbjct: 1   MPASPQLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQSGYDNCTT+GA GNWS GKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 172
           LVHPLPPPPSSPLA++  SPSSAT R GSRQW+IRALL+SLALIWFGSDWI
Sbjct: 121 LVHPLPPPPSSPLASKDSSPSSATPRTGSRQWKIRALLVSLALIWFGSDWI 171

[Close]

BLAST of ClCG10G012890 vs. NCBI nr
Match: KAG6581622.1 (Lamin-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 328.2 bits (840), Expect = 4.3e-86
Identity = 152/171 (88.89%), Postives = 160/171 (93.57%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFR 60
           MPASP L+AFFLLLC A ++FPVSATDHIVGANRGWNPGINYTLWANNHTF+VGD ISFR
Sbjct: 1   MPASPQLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQSGYDNCTT+GA GNWS GKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 172
           LVHPLPPPPSSPLA++  SPSSAT   GSRQWQIRALL+SLALIWFGSDWI
Sbjct: 121 LVHPLPPPPSSPLASKDSSPSSATPWTGSRQWQIRALLVSLALIWFGSDWI 171

[Close]

BLAST of ClCG10G012890 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.4e-26
Identity = 60/161 (37.27%), Postives = 90/161 (55.90%), Query Frame = 0


Query: 7   LIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFRYQKNQY 66
           + A  L    A  +  V+A  + VG N+ WNP INYT+WA    FY+GD++ F + +NQ+
Sbjct: 8   ITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQH 67

Query: 67  NVFEVNQSGYDNCTTDGALGNWS--GGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHP 126
           N+ EVN++ Y+ C  D  + NW+   G+D + LN+ + YY + G G C+ GMK+++ V  
Sbjct: 68  NILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVEK 127

Query: 127 LPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIW 166
           LPPPP S       S S  T   G  Q+ I   L +   +W
Sbjct: 128 LPPPPKSAPVKNIGSVSMVT---GLAQFMIPVSLFAFPAMW 165

[Close]

BLAST of ClCG10G012890 vs. ExPASy Swiss-Prot
Match: Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.4e-15
Identity = 61/184 (33.15%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFR 60
           M  S  L+  FLL    + L P  AT + VG   GW  G +Y+ WA++ TF VGD + F 
Sbjct: 1   MAFSNALVLCFLLAIINMAL-PSLATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFN 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICG-NGQCFNGMKVT 120
           Y    + V EV +S Y +CT+  ++   S G   IPL KA ++YFICG  G    GMK++
Sbjct: 61  YGAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLS 120

Query: 121 ILVH--------PLPPPPS----SPLATEHPSPSSATARAGSRQWQIRALLISLALIWFG 172
           I V         P   P S    SP + + P+ ++ T     +       L  +  ++F 
Sbjct: 121 IKVKASSGSSAAPSATPSSSGKGSPSSDDTPAATTTTTTPTKQNESSATSLSPIVALFFT 180

[Close]

BLAST of ClCG10G012890 vs. ExPASy Swiss-Prot
Match: A0A072U307 (Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 7.8e-14
Identity = 50/165 (30.30%), Postives = 84/165 (50.91%), Query Frame = 0


Query: 3   ASPHLIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFRYQ 62
           AS  ++    +    ++   ++ATD+IVG ++GW    +YT WA +  F VGD + F Y 
Sbjct: 2   ASSRVVLILSISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYD 61

Query: 63  KNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNG--MKVTI 122
            +++NVF+VN + + +CT        S GKD I L    R +++CG     +   MK+ I
Sbjct: 62  PSRHNVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVI 121

Query: 123 LVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIW 166
            V     P  SP     P  S A +   S    + A+++++A+I+
Sbjct: 122 TVLAEGAPAPSP-----PPSSDAHSVVSSLFGVVMAIMVAIAVIF 161

[Close]

BLAST of ClCG10G012890 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-13
Identity = 58/182 (31.87%), Postives = 94/182 (51.65%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVTLFPVSATDHI-VGANRG-W----NPGINYTLWANNHTFYVG 60
           M +S   +A F L    + LF ++A + + VG   G W    +   ++T WA    F VG
Sbjct: 7   MASSSLHVAIFSL----IFLFSLAAANEVTVGGKSGDWKIPPSSSYSFTEWAQKARFKVG 66

Query: 61  DFISFRYQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICG-NGQCF 120
           DFI FRY+  + +V EV +  Y++C T   L N++ G+  + L+++  +YFI G NG C 
Sbjct: 67  DFIVFRYESGKDSVLEVTKEAYNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCE 126

Query: 121 NGMKVTILV----HPLPPPPSSPLATEH-----PSPSSATARAGSRQWQIRALLISLALI 167
            G K++++V    H +  P  SP+  E      P+P S + R G   + +  L++ L   
Sbjct: 127 KGQKLSLVVISPRHSVISPAPSPVEFEDGPALAPAPISGSVRLGG-CYVVLGLVLGLC-A 182

[Close]

BLAST of ClCG10G012890 vs. ExPASy Swiss-Prot
Match: G7L0H3 (Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.3e-13
Identity = 51/161 (31.68%), Postives = 84/161 (52.17%), Query Frame = 0


Query: 7   LIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFRYQKNQY 66
           +++  ++L ++V +    ATDHIVG ++GW    +YT WA +  F VGD + F Y   ++
Sbjct: 9   ILSISMVLLSSVAI----ATDHIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPARH 68

Query: 67  NVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNG--MKVTILVHP 126
           NVF+VN + + +CT        S GKD I L    R +++CG     +   MK+ I V  
Sbjct: 69  NVFKVNGTLFQSCTFPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITVLA 128

Query: 127 LPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIW 166
              P  SP     P  S A +   S    + A+++++A+I+
Sbjct: 129 EGAPAPSP-----PPSSDAHSVVSSLFGVVMAIMVAIAVIF 160

[Close]

BLAST of ClCG10G012890 vs. ExPASy TrEMBL
Match: A0A6J1F2R0 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111441613 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.2e-87
Identity = 152/171 (88.89%), Postives = 160/171 (93.57%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFR 60
           MPASP L+AFFLLLC A ++FPVSATDHIVGANRGWNPGINYTLWANNHTF+VGD ISFR
Sbjct: 1   MPASPQLLAFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQSGYDNCTT+GA GNWS GKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 172
           LVHPLPPPPSSPLA++  SPSSAT R GSRQWQIRAL +SLALIWFGSDWI
Sbjct: 121 LVHPLPPPPSSPLASKDSSPSSATPRTGSRQWQIRALFVSLALIWFGSDWI 171

[Close]

BLAST of ClCG10G012890 vs. ExPASy TrEMBL
Match: A0A6J1J7T1 (lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482049 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 7.9e-86
Identity = 151/171 (88.30%), Postives = 160/171 (93.57%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFR 60
           MPAS  L+ FFLLLC A ++FPVSATDHIVGANRGWNPGINYTLWANNHTF+VGD ISFR
Sbjct: 1   MPASLQLLPFFLLLCTAASVFPVSATDHIVGANRGWNPGINYTLWANNHTFFVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQSGYDNCTT+GA GNWS GKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQSGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 172
           LVHPLPPPPSSPLA+++ SPSSAT R GSRQWQIRALL+SLALIWFGSDWI
Sbjct: 121 LVHPLPPPPSSPLASKNSSPSSATPRTGSRQWQIRALLVSLALIWFGSDWI 171

[Close]

BLAST of ClCG10G012890 vs. ExPASy TrEMBL
Match: A0A1S3CN34 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103502815 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.1e-84
Identity = 152/171 (88.89%), Postives = 158/171 (92.40%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFR 60
           M ASPHL+ FFLLLCAAV+LFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGD ISFR
Sbjct: 1   MLASPHLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQ+GYDNCTT+GA GNWS GKDFIPLNKAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTTEGAFGNWSSGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 172
           LVHPLPPPPSSPLATEH SPSSAT   GS+QW  RALLISLA+I FGS WI
Sbjct: 121 LVHPLPPPPSSPLATEHHSPSSATPCVGSQQWGFRALLISLAMILFGSHWI 171

[Close]

BLAST of ClCG10G012890 vs. ExPASy TrEMBL
Match: A0A0A0LCI9 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G710810 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 7.7e-81
Identity = 147/171 (85.96%), Postives = 153/171 (89.47%), Query Frame = 0


Query: 1   MPASPHLIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFR 60
           M  SP L+ FFLLLCAAV+LFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGD ISFR
Sbjct: 1   MLTSPRLLPFFLLLCAAVSLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFR 60

Query: 61  YQKNQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMKVTI 120
           YQKNQYNVFEVNQ+GYDNCT +GA GNWS GKDFIPL+KAQRYYFICGNGQCFNGMKVTI
Sbjct: 61  YQKNQYNVFEVNQTGYDNCTIEGASGNWSSGKDFIPLDKAQRYYFICGNGQCFNGMKVTI 120

Query: 121 LVHPLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 172
           LVHPLPPPPSSPLA EH SPSSAT   GSRQW  RALLISLA+I  GS WI
Sbjct: 121 LVHPLPPPPSSPLAMEHNSPSSATPWVGSRQWGFRALLISLAMILLGSHWI 171

[Close]

BLAST of ClCG10G012890 vs. ExPASy TrEMBL
Match: A0A6J1DHI7 (lamin-like protein OS=Momordica charantia OX=3673 GN=LOC111020966 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72
Identity = 135/168 (80.36%), Postives = 147/168 (87.50%), Query Frame = 0


Query: 4   SPHLIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFRYQK 63
           SPHL   FL+L AA  +  VSATDHIVGANRGWNPGINYTLWANNHTF+VGDFISFRYQK
Sbjct: 6   SPHLAFSFLILAAAAAV--VSATDHIVGANRGWNPGINYTLWANNHTFFVGDFISFRYQK 65

Query: 64  NQYNVFEVNQSGYDNCTTDGALGNWSGGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVH 123
            QYNVFEVNQSGY NCTT+GA GNWS GKDFI L +A+RYYFICGNGQC+NGMKVTILVH
Sbjct: 66  IQYNVFEVNQSGYGNCTTEGAFGNWSSGKDFILLKEAKRYYFICGNGQCYNGMKVTILVH 125

Query: 124 PLPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIWFGSDWI 172
           PLPPPPSSPLA +H SPSSA AR GS   +I+ALL+SLALIWFGS+WI
Sbjct: 126 PLPPPPSSPLAAKHSSPSSAPARLGSWPTRIQALLVSLALIWFGSEWI 171

[Close]

BLAST of ClCG10G012890 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 120.9 bits (302), Expect = 9.7e-28
Identity = 60/161 (37.27%), Postives = 90/161 (55.90%), Query Frame = 0


Query: 7   LIAFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFRYQKNQY 66
           + A  L    A  +  V+A  + VG N+ WNP INYT+WA    FY+GD++ F + +NQ+
Sbjct: 8   ITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQH 67

Query: 67  NVFEVNQSGYDNCTTDGALGNWS--GGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHP 126
           N+ EVN++ Y+ C  D  + NW+   G+D + LN+ + YY + G G C+ GMK+++ V  
Sbjct: 68  NILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVEK 127

Query: 127 LPPPPSSPLATEHPSPSSATARAGSRQWQIRALLISLALIW 166
           LPPPP S       S S  T   G  Q+ I   L +   +W
Sbjct: 128 LPPPPKSAPVKNIGSVSMVT---GLAQFMIPVSLFAFPAMW 165

[Close]

BLAST of ClCG10G012890 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 )

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26
Identity = 56/128 (43.75%), Postives = 82/128 (64.06%), Query Frame = 0


Query: 12  LLLCAAVTLFPVSATD-----HIVGANRGWNPGINYTLWANNHTFYVGDFISFRYQKNQY 71
           +L+  AV  F ++AT+       VG N+ WNP INYT+WA +  FY+ D++ F Y++NQY
Sbjct: 6   VLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVYERNQY 65

Query: 72  NVFEVNQSGYDNCTTDGALGNWS--GGKDFIPLNKAQRYYFICGN-GQCFNGMKVTILVH 131
           NV EVN++ Y +C  +  + NWS   G+D + LN  + YY I GN G C+ GMK+ +LV 
Sbjct: 66  NVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAVLVE 125

[Close]

BLAST of ClCG10G012890 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 )

HSP 1 Score: 111.3 bits (277), Expect = 7.7e-25
Identity = 52/127 (40.94%), Postives = 80/127 (62.99%), Query Frame = 0


Query: 9   AFFLLLCAAVTLFPVSATDHIVGANRGWNPGINYTLWANNHTFYVGDFISFRYQKNQYNV 68
           A  L    A  +  V+A  ++VG  + WNP INYTLWA    FYVGD++ F + ++Q+N+
Sbjct: 10  AVVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVFYRDQHNI 69

Query: 69  FEVNQSGYDNCTTDGALGNWS--GGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVH-PL 128
            EVN++ Y+ C ++  + N++   G+D +PL + +RYY + G G C  GMK+ +LV  P 
Sbjct: 70  LEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLDVLVETPP 129

Query: 129 PPPPSSP 133
           PPPP +P
Sbjct: 130 PPPPFTP 136

[Close]

BLAST of ClCG10G012890 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 )

HSP 1 Score: 95.9 bits (237), Expect = 3.3e-20
Identity = 50/141 (35.46%), Postives = 83/141 (58.87%), Query Frame = 0


Query: 11  FLLLCAAVTLFPVSATDHIVGANR-GWNPGINYTLWANNHTFYVGDFISFRYQKNQYNVF 70
           ++ +   + +  V ++ H VG  R  WN  +N++ WAN+  FY GD++ F + + ++N+ 
Sbjct: 11  YVTVMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHNIL 70

Query: 71  EVNQSGYDNCTTDGALGNWS-GGKDFIPLNKAQRYYFICGNGQCFNGMKVTILVHPLPPP 130
           +VN+S Y+ C  +  + N + GG+D   L + + YYFICG G C  GMK+ I V P PPP
Sbjct: 71  QVNKSSYEQCVDNDYIFNITRGGRDVFQLLEPKPYYFICGRGYCLKGMKLAITVLPQPPP 130

Query: 131 --PSSPLATEHP--SPSSATA 146
             P++  +T  P   P++ TA
Sbjct: 131 SAPTNFTSTTTPLIPPNAITA 151

[Close]

BLAST of ClCG10G012890 vs. TAIR 10
Match: AT3G17675.1 (Cupredoxin superfamily protein )

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-17
Identity = 40/100 (40.00%), Postives = 59/100 (59.00%), Query Frame = 0


Query: 26  TDHIVGANRGWNPGINYTLWANNHTFYVGDFISFRYQKNQYNVFEVNQSGYDNCTTDGAL 85
           T+HIVG + GW    NYT W     F+VGD + F Y+ +Q+NV +VN + Y +C  D   
Sbjct: 7   TEHIVGDSNGWELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCGLDNYT 66

Query: 86  GNWSGGKDFIPLNKAQRYYFICG-NGQCFNGMKVTILVHP 125
             ++ G D I L++  + +FICG +  C NG K++I V P
Sbjct: 67  TLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINVAP 106

The following BLAST results are available for this feature:

BLAST of ClCG10G012890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903873.1	4.6e-88	91.72	lamin-like protein [Benincasa hispida]	[more]
XP_023526524.1	6.0e-88	90.06	lamin-like protein [Cucurbita pepo subsp. pepo]	[more]
XP_022934432.1	1.5e-86	88.89	lamin-like protein [Cucurbita moschata]	[more]
KAG7018121.1	1.5e-86	88.89	Lamin-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6581622.1	4.3e-86	88.89	Lamin-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of ClCG10G012890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	1.4e-26	37.27	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]
Q41001	1.4e-15	33.15	Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
A0A072U307	7.8e-14	30.30	Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1	[more]
Q9SK27	1.3e-13	31.87	Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 S...	[more]
G7L0H3	2.3e-13	31.68	Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1	[more]

BLAST of ClCG10G012890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F2R0	7.2e-87	88.89	lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111441613 PE=4 SV=1	[more]
A0A6J1J7T1	7.9e-86	88.30	lamin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482049 PE=4 SV=1	[more]
A0A1S3CN34	1.1e-84	88.89	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103502815 PE=4 SV=1	[more]
A0A0A0LCI9	7.7e-81	85.96	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G710810...	[more]
A0A6J1DHI7	1.7e-72	80.36	lamin-like protein OS=Momordica charantia OX=3673 GN=LOC111020966 PE=4 SV=1	[more]

BLAST of ClCG10G012890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15350.1	9.7e-28	37.27	early nodulin-like protein 17	[more]
AT3G01070.1	1.1e-26	43.75	early nodulin-like protein 16	[more]
AT4G12880.1	7.7e-25	40.94	early nodulin-like protein 19	[more]
AT2G27035.1	3.3e-20	35.46	early nodulin-like protein 20	[more]
AT3G17675.1	2.0e-17	40.00	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 24..125 e-value: 5.1E-31 score: 109.0
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 25..123
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 36..116 e-value: 5.9E-21 score: 74.3
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 26..124 score: 37.491367
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 10..158
None	No IPR available	PANTHER	PTHR33021:SF13	OS09G0557900 PROTEIN	coord: 10..158
None	No IPR available	CDD	cd11017	Phytocyanin_like_1	coord: 26..122 e-value: 1.50547E-49 score: 153.315

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G012890.2	ClCG10G012890.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity