ClCG10G010650 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G010650
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	protein LOW PSII ACCUMULATION 1, chloroplastic
Location	CG_Chr10: 23539412 .. 23545448 (+)
RNA-Seq Expression	ClCG10G010650
Synteny	ClCG10G010650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGATTTTCTGCCATGTGAGGTCTAAACTTCCCAATGGCTATGGCTACTCTTCCTCTGTTCCACCAGCTCCTCACCCTCTCAAACCCCAAATCAGCCACCATTCTCAGGCCCCGGCTACCCACTTCTCAAAGGACTTTCCACCTCTCCATTCTATGTTGCTCTTCTACTTCTCAGTCTCCAGAAGCTAATCTCCAATCTGCAGAGTCCTCTATCAATATCGGCCTCGAGCTCTTCTCTAAAGGACGGGTGTGCGTTCTCTTTCGATTTGTATTTTCTTGTTTTTTGCGAAATGGGTATTGTTTAATCATTTATTTCGTTTCCACTTGTTCGATTATTTCGGAATTTTAGTTCAGTTTTCTGAGCGTGTTCTTGAATGGTCCTTTTGGTACATATAATTAGAGAATTTGCTGAGTGGTTCTTTTGAGAAACCAGGGCAACTTCTTTGGGATTTTTGGTGGACTTTGGTATGTGTAACTAATGGCTACTTTGACCTTGTATGCCAATGGAGAACCCAGCCAAAAGAAAAGGGGGAAAAAAGGTTGAATTATAAGTTCAGTCCAAGTCTACTTAGTCCATGTACTTTTAGGGTCCCTAAACTTTTATGCTTTTGTCCATTTAGTCCCCAGTGAGATTTTAAAGATGCATTGTAAACTTCTTAAAGTACAGCCACCAATTAGACAGGATGTGCTATCAAGTTTCGAAATCATGGAATAACTTAAATACTTCCACTGTCCTCAGTACAAATTGATCAATCAAAATCTTATAAATTAGGGAAACAAATGCATCATTTTTAGTTTGTTTGGAACAAAGGTATTAGTGATCATGGTTTTGTAGATTAGATGAGGATATTTTGGTATTAGATATGTGAGGGAGAAAGAAGTGGTGAAATGTTAGGAGAAAGACAGTGATGAAGTTACAAAAGGGAAAGTAGAAGAGTCTAAGCCTTTGCATTTTTCAATGAAAAGAAGACAAATGTGATTTCATAGTGGCCTAGAGGGTACTGGGAGGAGGTTTGGATAGTATTAGAGATAATACTTCTTTTTGAGCTGATGTCGCTAAGGATTTTTGTAACAATCAACTAGGTCTTATTCTTTGGATTCGAGTCTCTTCCTACTAGTTTTTGCTTTGACTTCTTTGGGGTTTTTTCATTTTTTTAATATCCTTGTATATTCTTTCATATTTCTCCATGAAAGCTTGGTTTCTCATAAAAATAATAATAAAATAATAGAACCCCAGAGGGTATTAATGGCTGTAAGAGCCATATTTGATATTATTAGTTCTGGAGAGCGCATCAGATATTGAAAGTTTGTTTGCAGTAGAGTCAAAATCTCCTACATTTCCAACAATCTCATTGAGAAATATTGAAGTTTAAAGCCACAAGGCAACTAAGTTTAGTGGAGTTACAAAAATTCCTCCTAATTAGTAGAAATCATAGAGGCTTCAAAGGAAGTTCCCAAATTGAGTCCTTTCTCCTTCCATTTGTTGTCTTTGCCTTAGAGAGGTGTTCAGGTGGAATCGGTGGATCATTTATTATTGCACTGTGAGTTTGCTTATAAAGGGTGGGCTATGCTATTTAATATCTTTGGGTCTAGGGGTGGCTGGTTGTCTTACCTAAGAAGATTGATGAGTGGATGATCGAAGGTATTGATGGTGGTTGCTTTTATGGAAAAGGAAAAATTTTATGGGGATGTGCTACTCGTTCTCTTCTATCATGTCTCTGGAAAGAAAGAAATAGCAGGATGTTTGAGGATAACTTTGCTTCTTTTGATTCTTTTTGGGCTTTTAATCAGCATACAACCTCTTGGTAGTGCACAAATTACACCAAATTCTTTTGTAATTATACCCTTCTAATGATTATTAACAATTGGAGGGCTCTTCTTGATTAGTTTTGTGGGAGGGGTTAACTATACCCCTGCCCTTAGGCTGTCCTTTGTCTCTTTTTGATGAATATACATATCCATTTCTTATAACAAGAAAAAAAAAAAAAAATAGTAGATATCCTAGAAAGGTCAAAGTTACTAAATTCCTTATCCAAAGAACGCCAAGTCAAGGCTACGAGGGAAAAGAAACAGAAAAAAACAATTATTTCTAATTTTGGTCCTTTAACTTCTCTTTATCCGTTGACAATAATGTCATTCTTTTCTTCCTTTTTAGTTTCTTTGATTTTGGCAGAAACCTTTGTGGCCTTTAAGCATCTCTTAGGAATAGTTTTTAACAGTTGCAAGTTGCATCAAATTCAAAGTAAATTTTAGCATCCCTCCCAATGACACCATAAACTTGGGAATAACTAAGTTGTTACTGTATTTTCCTCAACTCTTGCAATCTGATGAGATGCAATAGTGCATCACAGAGCGCCTTTCAAGACTCTTAATTCTTGTGGTCATTTGTATTGTACTATTAAACACTTACGAAAACTTTAGTTTCCTTGATAGTTTTGTTTAATCCCCAAAGATTCATTTTTTTGAGTGGATCAGTGATTATTGATTACAGTCATGTCATATTTCTCCAAAACACTAGCTTCTTTCTTCATTGGCTTCTGATATTTGTTTTCCAGTTTTGTTCCTCAGTAAGTTTGTAAGAAGTGTGTGTACATTTCACAAAACAATGAATATGTCAGGTCAAAGAAGCTTTAGTCCAGTTTGAAGCAGCACTGAATATGGATCCCAACCCAATGGAGGCCCAAGCTGCTTTGTACAATAAAGCATGCTGTCATGCCTATCGGTATGCGTAAAGGTCTCTATTTCTTGCTTATAACATAGCTTCCTTCTTTTCTTTTCTTTTCTTTTCCTTTTTTTTAAAAAGAAAAATTTAAATGCTATATTTGAAGAATTGCTCATCCTGCATTGATCGAGGTTAATAGACTTAGTTTAATGTCTCCTTTAAGTTGCTTTTAGACTTCTATTATTTATTTCAGATGACCAATTGTGACTTTGTGAATATTTTGAGGTAGTGGGGAAGGAAAGAAAGCCGCTGACTGCCTGCGTGTTGCATTAAGAGAATATAACCTGAAATTTGGCACAATTCTGAACGATCCTGACTTGGCCTCATTCAGAGCTCTTCCTGAATTCAAGGAATTGCAAGAAGAGGTTCGTTGCTCAATGCCCCTCTCTTCATCTTGTAATCCTCATCTTTTTCTTTCATAATCTCCTTGAATATCATAATTTTTTTAACACAAATAGATGACTGTTTAATTAATGGATTCAAAATTACTAATTCAATTATCTTTCTGAATAATGATGGTGTCCAGGCTAGGATGGGTGGAGAGGATATAGGATATGGTTTTCGAAGAGATCTTAAACTCATTAGTGAAGTTCAAGCACCTTTCCGTGGGGTTCGGAGGTTCTTTTATGTGGCACTATCTGCAGCTGCTGGAATTTCGTTGTTGTTTAATATACCCAGGTTAATTCGTGCTATTCAAGGTGGCGATGAAGCTCCTGATGTTTGGGAAACTGCTGGAAATTTAGCTGTTAATGTTGGAGGTACATCTAAATTTGTTATGACTTCCATAGCTCAGTTAAGGGATATAAATATGAAGGTACATGTTCACTATGGTGAGGTAGCTGAAATACTAACTTTCCAATCAGCATTAAACAGGTATTGTTGTGTTTGTGGCATTATTTTTATGGGACAACAAGAAAGAAGAGGAACAGCTTGCACAAATATCAAGAAATGAAACATTATCAAGGTTGCCTCTACGTCTTTCCACCAATCGGATTGTTGAACTTGTACAGCTTCGAGATACTGTAAGACCGGTGAGTATGATTATTCATCTTACCCCTTGTTCTAGGGTTGTTCATTCTCTTTCCCCTTCTGATTATTTCACTTGATTTGCCCATTTTGCCTTTGTGTCCCTAACTTGTTGCCATTGGTGGCTTGTCCTTGACCATTTTTGCTGGAATCAACATTTCAGTTATCATTTGTGCTGATTCTTCTTGCTTCTATAACAATTCCCCTACCCCTTCTACTAAGGCTGCTAGTGTTTGTTCAATCTATAAAATCCTCTGGACATACTTTGCAATTTTCCCAGTCGTGCACATCTATTGCTTCAAGTCGGTCATCCATCATGTAAATAATGCTTTTCAGAAGACAAATGAAAGACTGGTGCTACAAGCTATTTTAAGAGACAGGTTCAGAGAGGAACGGAAGGGTTTTGTTGGTACAAGTATATACATGGTGGAAGTTTCTGGAATAGGTTGTTTTTTGTAGCCTCTTTTCAGCCTTCGGCGACTTCCATATTTTGGATATTTATCTATCCCTGATTTTAGCCTAAGAAAACATTTCTTCTCTAAAATTTTTTCTTTTCTTCTCCTGTTGGCTTTAATCACCCAACGCTCTTTGCATGTCCTGTCCTCCATTGAATTTCATGTTTTCAATAAACCAAAGTTAGCTAGTTTGCTTGGAAGAATAGATATTGCCTCTACTTATGTACATTTTTGCATTCCTTAAATTATTACCTTGCAAGTAAGGTCATTTTAGCTGGGAAAAAGGAGACAGTTTCTGCAGCCATTCAAAAGGCAGAAAGGTTCAGAACTGAGCTCCTTAGACGAGGCGTTCTCTTAGTTCCTGTCATATGGGGCCAAGGTAGGGAATCCCAAATAGAAAAGAAAGGATTTGGTGCTCCAGCCACCACTGCTGCTACTGCTCTGCCATCAATTGGGGTAAGTAAGATCAATAGTCTATCTTGTCCTACATTCGTCCAGGATATCTTTTGAAATATGCTGTTGTTTGTTCATGTTCCCGACTAGAAAGCCTGTAAGTTAATCGATAGGTTCTCTTGTTATCATGGAACTCTTGTAGGAAGATTTTGAGAAACGAGCTCAGTCTATAACTGCAAAATCGAAGTTGAAAGCTGAAATTCGATTCAGGGCTGAGGTTATATCACCTGCAGAATGGGAAAGGTAAATGTGTACGTGTCTAGGGGCATGCTTGCTTCCCATCATCTAATTTTCTTGTCAGTTTATGTAGTGAGCTTTGCTCTCCATCATCTAATCTACTGATATAAAACTAACATGGGGAAAAATCACAACCATTATATCTCTGAACTTTTTTCCCCCTCCTCTAAAGTTGTATTTTTATTTTTAGAGAAAACAGAAACCATCCATTTACATATTGAAATGGAATACAAAAGATGTTCCTATCAGATAACATGCATTCATGGATTATATATTCTAAAGTTGTGTTGTCTCGCCAATATTATGGAGACAATTAAATTATCTGGTTGAATCAATAGGAGGTGGATGTGATATTGTGTTTTCCACTTGGATTATGACTTTTTTTTTTTTTTTCCTGAATTAGTTGGATAAGAGACCAGCAGAAATCTGAAGGGGTTACTCCTGGTGAGGATGTCTACATAATATTGCGATTGGATGGTCGAGTTCGAAGATCAGGGAGAGTAAGTTCATATCATGAAAATTATCTACTTTCTAATCAAAACACATATTAGGATGCTTTTCCTTTAATCTTGGAGATCTAAAGCATGTTATCAGTCAACTATTTGATCTAGAATATAGCGCCTTCTTCGTCCTCCAAATGTCCTTGTTCAAGTTTTTTAAAAGCTAAAAAGAATTGTTGAGGATCTTGCAAACTTTTTCCTCATTTTTGGTGATGATATGCAGGGGATGCCTGACTGGCAAAAAATTATTGAAGAGTTACCACCAATGGAAGCTCTTCTTAGCAAGCTAGAAAGATGAGATAAACAGAAACGAGATACATACACCGTGCAACTATCGATGGCGTCATTTCCACTACCCGTTCAAGTTCCACACCAATACCCAGAAGAGTAAACTGTCTAGTAATACATAGTCTTAGCTAGTTGTTTTTTCGTTATTATAAGTGTGTTTGGAGGATGGGTGATTGATCCAAACCTGAGACCACTCTGTTCTGTTTTATTTCCTGTTCCCATCCATCTCTTCAGAGTCCACAAGAAGATGATAAATTTTTTTGGGAATTCAATTGATTTCCATTGATTAGAATTCATTGTTTCTTCTACAATTTGTGGTTCTTTACCTATAAAATTGATTTGGGTGTTTGACTTTA

mRNA sequence

TTGATTTTCTGCCATGTGAGGTCTAAACTTCCCAATGGCTATGGCTACTCTTCCTCTGTTCCACCAGCTCCTCACCCTCTCAAACCCCAAATCAGCCACCATTCTCAGGCCCCGGCTACCCACTTCTCAAAGGACTTTCCACCTCTCCATTCTATGTTGCTCTTCTACTTCTCAGTCTCCAGAAGCTAATCTCCAATCTGCAGAGTCCTCTATCAATATCGGCCTCGAGCTCTTCTCTAAAGGACGGGTCAAAGAAGCTTTAGTCCAGTTTGAAGCAGCACTGAATATGGATCCCAACCCAATGGAGGCCCAAGCTGCTTTGTACAATAAAGCATGCTGTCATGCCTATCGGTATGCTGGGGAAGGAAAGAAAGCCGCTGACTGCCTGCGTGTTGCATTAAGAGAATATAACCTGAAATTTGGCACAATTCTGAACGATCCTGACTTGGCCTCATTCAGAGCTCTTCCTGAATTCAAGGAATTGCAAGAAGAGGCTAGGATGGGTGGAGAGGATATAGGATATGGTTTTCGAAGAGATCTTAAACTCATTAGTGAAGTTCAAGCACCTTTCCGTGGGGTTCGGAGGTTCTTTTATGTGGCACTATCTGCAGCTGCTGGAATTTCGTTGTTGTTTAATATACCCAGGTTAATTCGTGCTATTCAAGGTGGCGATGAAGCTCCTGATGTTTGGGAAACTGCTGGAAATTTAGCTGTTAATGTTGGAGGTATTGTTGTGTTTGTGGCATTATTTTTATGGGACAACAAGAAAGAAGAGGAACAGCTTGCACAAATATCAAGAAATGAAACATTATCAAGGTTGCCTCTACGTCTTTCCACCAATCGGATTGTTGAACTTGTACAGCTTCGAGATACTGTAAGACCGGTGATTATCATTTGTGCTGATTCTTCTTGCTTCTATAACAATTCCCCTACCCCTTCTACTAAGGCTGCTAGTGTTTGTTCAATCTATAAAATCCTCTGGACATACTTTGCAATTTTCCCAGTCGTGCACATCTATTGCTTCAAGTCGGTCATCCATCATGTAAATAATGCTTTTCAGAAGACAAATGAAAGACTGGTGCTACAAGCTATTTTAAGAGACAGTAAGGTCATTTTAGCTGGGAAAAAGGAGACAGTTTCTGCAGCCATTCAAAAGGCAGAAAGGTTCAGAACTGAGCTCCTTAGACGAGGCGTTCTCTTAGTTCCTGTCATATGGGGCCAAGGTAGGGAATCCCAAATAGAAAAGAAAGGATTTGGTGCTCCAGCCACCACTGCTGCTACTGCTCTGCCATCAATTGGGGTAAAAAGCCTGGCTGAGGTTATATCACCTGCAGAATGGGAAAGTTGGATAAGAGACCAGCAGAAATCTGAAGGGGTTACTCCTGGTGAGGATGTCTACATAATATTGCGATTGGATGGTCGAGTTCGAAGATCAGGGAGAGGGATGCCTGACTGGCAAAAAATTATTGAAGAGTTACCACCAATGGAAGCTCTTCTTAGCAAGCTAGAAAGATGAGATAAACAGAAACGAGATACATACACCGTGCAACTATCGATGGCGTCATTTCCACTACCCGTTCAAGTTCCACACCAATACCCAGAAGAGTAAACTGTCTAGTAATACATAGTCTTAGCTAGTTGTTTTTTCGTTATTATAAGTGTGTTTGGAGGATGGGTGATTGATCCAAACCTGAGACCACTCTGTTCTGTTTTATTTCCTGTTCCCATCCATCTCTTCAGAGTCCACAAGAAGATGATAAATTTTTTTGGGAATTCAATTGATTTCCATTGATTAGAATTCATTGTTTCTTCTACAATTTGTGGTTCTTTACCTATAAAATTGATTTGGGTGTTTGACTTTA

Coding sequence (CDS)

ATGGCTATGGCTACTCTTCCTCTGTTCCACCAGCTCCTCACCCTCTCAAACCCCAAATCAGCCACCATTCTCAGGCCCCGGCTACCCACTTCTCAAAGGACTTTCCACCTCTCCATTCTATGTTGCTCTTCTACTTCTCAGTCTCCAGAAGCTAATCTCCAATCTGCAGAGTCCTCTATCAATATCGGCCTCGAGCTCTTCTCTAAAGGACGGGTCAAAGAAGCTTTAGTCCAGTTTGAAGCAGCACTGAATATGGATCCCAACCCAATGGAGGCCCAAGCTGCTTTGTACAATAAAGCATGCTGTCATGCCTATCGGTATGCTGGGGAAGGAAAGAAAGCCGCTGACTGCCTGCGTGTTGCATTAAGAGAATATAACCTGAAATTTGGCACAATTCTGAACGATCCTGACTTGGCCTCATTCAGAGCTCTTCCTGAATTCAAGGAATTGCAAGAAGAGGCTAGGATGGGTGGAGAGGATATAGGATATGGTTTTCGAAGAGATCTTAAACTCATTAGTGAAGTTCAAGCACCTTTCCGTGGGGTTCGGAGGTTCTTTTATGTGGCACTATCTGCAGCTGCTGGAATTTCGTTGTTGTTTAATATACCCAGGTTAATTCGTGCTATTCAAGGTGGCGATGAAGCTCCTGATGTTTGGGAAACTGCTGGAAATTTAGCTGTTAATGTTGGAGGTATTGTTGTGTTTGTGGCATTATTTTTATGGGACAACAAGAAAGAAGAGGAACAGCTTGCACAAATATCAAGAAATGAAACATTATCAAGGTTGCCTCTACGTCTTTCCACCAATCGGATTGTTGAACTTGTACAGCTTCGAGATACTGTAAGACCGGTGATTATCATTTGTGCTGATTCTTCTTGCTTCTATAACAATTCCCCTACCCCTTCTACTAAGGCTGCTAGTGTTTGTTCAATCTATAAAATCCTCTGGACATACTTTGCAATTTTCCCAGTCGTGCACATCTATTGCTTCAAGTCGGTCATCCATCATGTAAATAATGCTTTTCAGAAGACAAATGAAAGACTGGTGCTACAAGCTATTTTAAGAGACAGTAAGGTCATTTTAGCTGGGAAAAAGGAGACAGTTTCTGCAGCCATTCAAAAGGCAGAAAGGTTCAGAACTGAGCTCCTTAGACGAGGCGTTCTCTTAGTTCCTGTCATATGGGGCCAAGGTAGGGAATCCCAAATAGAAAAGAAAGGATTTGGTGCTCCAGCCACCACTGCTGCTACTGCTCTGCCATCAATTGGGGTAAAAAGCCTGGCTGAGGTTATATCACCTGCAGAATGGGAAAGTTGGATAAGAGACCAGCAGAAATCTGAAGGGGTTACTCCTGGTGAGGATGTCTACATAATATTGCGATTGGATGGTCGAGTTCGAAGATCAGGGAGAGGGATGCCTGACTGGCAAAAAATTATTGAAGAGTTACCACCAATGGAAGCTCTTCTTAGCAAGCTAGAAAGATGA

Protein sequence

MAMATLPLFHQLLTLSNPKSATILRPRLPTSQRTFHLSILCCSSTSQSPEANLQSAESSINIGLELFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYRYAGEGKKAADCLRVALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFRGVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWETAGNLAVNVGGIVVFVALFLWDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVIIICADSSCFYNNSPTPSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAFQKTNERLVLQAILRDSKVILAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQIEKKGFGAPATTAATALPSIGVKSLAEVISPAEWESWIRDQQKSEGVTPGEDVYIILRLDGRVRRSGRGMPDWQKIIEELPPMEALLSKLER

Homology

[Close]

BLAST of ClCG10G010650 vs. NCBI nr
Match: XP_008454363.1 (PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic isoform X1 [Cucumis melo] >KAA0044367.1 protein LOW PSII ACCUMULATION 1 [Cucumis melo var. makuwa] >TYK29495.1 protein LOW PSII ACCUMULATION 1 [Cucumis melo var. makuwa])

HSP 1 Score: 721.8 bits (1862), Expect = 3.9e-204
Identity = 393/512 (76.76%), Postives = 403/512 (78.71%), Query Frame = 0


Query: 1   MAMATLPLFHQLLTLSNPKSATILRPRLPTSQRTFHLSILCCSSTSQSPEANLQSAESSI 60
           MAMATLPLFH L TLSNPKS TILRPRLPTSQRTFHLSIL CSSTSQSPEANLQSAES +
Sbjct: 1   MAMATLPLFHHLPTLSNPKSPTILRPRLPTSQRTFHLSILSCSSTSQSPEANLQSAESCV 60

Query: 61  NIGLELFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYRYAGEGKKAADCLRV 120
           N+GL+LFSKGRVKEALVQFEAALNMDPNPMEAQAA YNKACCHAYR  GEGKKAADCLRV
Sbjct: 61  NLGLQLFSKGRVKEALVQFEAALNMDPNPMEAQAAFYNKACCHAYR--GEGKKAADCLRV 120

Query: 121 ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR 180
           ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR
Sbjct: 121 ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR 180

Query: 181 GVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWETAGNLAVNVGGIVVFVALFL 240
           GVRRFFYVALSAAAGISLLFNIPRL RAIQGGD APDVWETAGNLAVNVGGI+VFVALFL
Sbjct: 181 GVRRFFYVALSAAAGISLLFNIPRLFRAIQGGDGAPDVWETAGNLAVNVGGIIVFVALFL 240

Query: 241 WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVIIICADSSCFYNNSPT 300
           WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRP                 
Sbjct: 241 WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRP----------------- 300

Query: 301 PSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAFQKTNERLVLQAILRDSKVI 360
                                                                     VI
Sbjct: 301 ----------------------------------------------------------VI 360

Query: 361 LAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQIEKKGFGAPATTAATALPS 420
           LAGKKETVS+AIQKAERFRTELLRRGVLLVPVIWG+GRE QIEKKGFGAPA  AATALPS
Sbjct: 361 LAGKKETVSSAIQKAERFRTELLRRGVLLVPVIWGEGREPQIEKKGFGAPA-AAATALPS 420

Query: 421 IG-------------------VKSLAEVISPAEWESWIRDQQKSEGVTPGEDVYIILRLD 480
           IG                   ++  AEVISPAEWESWIRDQQKSEGVTPGEDVYIILRLD
Sbjct: 421 IGEDFEKRAQSITAKSKLKAEIRFRAEVISPAEWESWIRDQQKSEGVTPGEDVYIILRLD 434

Query: 481 GRVRRSGRGMPDWQKIIEELPPMEALLSKLER 494
           GR+RRSGRGMPDWQKIIEELPPMEALLSKLE+
Sbjct: 481 GRIRRSGRGMPDWQKIIEELPPMEALLSKLEK 434

[Close]

BLAST of ClCG10G010650 vs. NCBI nr
Match: XP_004152258.2 (protein LOW PSII ACCUMULATION 1, chloroplastic [Cucumis sativus] >KGN52798.1 hypothetical protein Csa_014443 [Cucumis sativus])

HSP 1 Score: 718.4 bits (1853), Expect = 4.3e-203
Identity = 390/512 (76.17%), Postives = 401/512 (78.32%), Query Frame = 0


Query: 1   MAMATLPLFHQLLTLSNPKSATILRPRLPTSQRTFHLSILCCSSTSQSPEANLQSAESSI 60
           MAMATLPLFH L TLSNPKS TILRPRLPTSQRTF LSIL CSSTSQSPEANLQSAES +
Sbjct: 1   MAMATLPLFHHLPTLSNPKSLTILRPRLPTSQRTFRLSILSCSSTSQSPEANLQSAESCV 60

Query: 61  NIGLELFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYRYAGEGKKAADCLRV 120
           N GL+LFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYR  GEGKKAADCLRV
Sbjct: 61  NFGLQLFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYR--GEGKKAADCLRV 120

Query: 121 ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR 180
           ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR
Sbjct: 121 ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR 180

Query: 181 GVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWETAGNLAVNVGGIVVFVALFL 240
           GVR+FFYVALSAAAGISLLFNIPRL RAIQGGD APDVWETAGNLAVNVGGI+VFVALFL
Sbjct: 181 GVRKFFYVALSAAAGISLLFNIPRLFRAIQGGDGAPDVWETAGNLAVNVGGIIVFVALFL 240

Query: 241 WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVIIICADSSCFYNNSPT 300
           WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRP                 
Sbjct: 241 WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRP----------------- 300

Query: 301 PSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAFQKTNERLVLQAILRDSKVI 360
                                                                     VI
Sbjct: 301 ----------------------------------------------------------VI 360

Query: 361 LAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQIEKKGFGAPATTAATALPS 420
           LAGKKETVS+AIQKAERFRTELLRRGVLLVPVIWG+GRE QIEKKGFGAP T AA ALPS
Sbjct: 361 LAGKKETVSSAIQKAERFRTELLRRGVLLVPVIWGEGREPQIEKKGFGAPTTAAAAALPS 420

Query: 421 IG-------------------VKSLAEVISPAEWESWIRDQQKSEGVTPGEDVYIILRLD 480
           IG                   ++  AEVISPAEWESWIR+QQ+SEGVTPGEDVYIILRLD
Sbjct: 421 IGEDFEKRAQSITAKSKLKAEIRFRAEVISPAEWESWIRNQQESEGVTPGEDVYIILRLD 435

Query: 481 GRVRRSGRGMPDWQKIIEELPPMEALLSKLER 494
           GRVRRSGRGMPDWQKIIEELPPMEALLSKLE+
Sbjct: 481 GRVRRSGRGMPDWQKIIEELPPMEALLSKLEK 435

[Close]

BLAST of ClCG10G010650 vs. NCBI nr
Match: XP_038905239.1 (protein LOW PSII ACCUMULATION 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 709.5 bits (1830), Expect = 2.0e-200
Identity = 389/512 (75.98%), Postives = 401/512 (78.32%), Query Frame = 0


Query: 1   MAMATLPLFHQLLTLSNPKSATILRPRLPTSQRTFHLSILCCSSTSQSPEANLQSAESSI 60
           MAMATLPLFH LLT S+PKSATILRPRL TSQR FH+SILC SSTSQSPEANL+SAES +
Sbjct: 1   MAMATLPLFHHLLTFSSPKSATILRPRLLTSQRAFHVSILCFSSTSQSPEANLESAESCV 60

Query: 61  NIGLELFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYRYAGEGKKAADCLRV 120
           N+GL+LFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYR  GEGKKAADCLRV
Sbjct: 61  NLGLQLFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYR--GEGKKAADCLRV 120

Query: 121 ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR 180
           ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR
Sbjct: 121 ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR 180

Query: 181 GVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWETAGNLAVNVGGIVVFVALFL 240
           GVRRFF VALSAAAGISLLFNIPRL RAIQGGD APDVWETAGNLAVNVGGIVVFVALFL
Sbjct: 181 GVRRFFSVALSAAAGISLLFNIPRLFRAIQGGDGAPDVWETAGNLAVNVGGIVVFVALFL 240

Query: 241 WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVIIICADSSCFYNNSPT 300
           WDNKKEEEQL+QISRNETLSRLPLRLSTNRIVELVQLRDTVRP                 
Sbjct: 241 WDNKKEEEQLSQISRNETLSRLPLRLSTNRIVELVQLRDTVRP----------------- 300

Query: 301 PSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAFQKTNERLVLQAILRDSKVI 360
                                                                     VI
Sbjct: 301 ----------------------------------------------------------VI 360

Query: 361 LAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQIEKKGFGAPATTAATALPS 420
           LAGKKETVS+AIQKAERFRTELLRRGVLLVPVIWG+GRE QIEKKGFGAPAT AA ALPS
Sbjct: 361 LAGKKETVSSAIQKAERFRTELLRRGVLLVPVIWGEGREPQIEKKGFGAPATPAA-ALPS 420

Query: 421 IG-------------------VKSLAEVISPAEWESWIRDQQKSEGVTPGEDVYIILRLD 480
           IG                   ++  AEV+SPAEWESWIRDQQKSE VTPGEDVYIILRLD
Sbjct: 421 IGEDFEKRAQSITAKSKLKAEIRFRAEVVSPAEWESWIRDQQKSEEVTPGEDVYIILRLD 434

Query: 481 GRVRRSGRGMPDWQKIIEELPPMEALLSKLER 494
           GRVRRSGRGMPDWQKIIEELPPMEALLSKLER
Sbjct: 481 GRVRRSGRGMPDWQKIIEELPPMEALLSKLER 434

[Close]

BLAST of ClCG10G010650 vs. NCBI nr
Match: XP_022935311.1 (protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 704.9 bits (1818), Expect = 4.9e-199
Identity = 380/514 (73.93%), Postives = 404/514 (78.60%), Query Frame = 0


Query: 1   MAMATLPLFHQLLTLSNPKSATILRPRLPT--SQRTFHLSILCCSSTSQSPEANLQSAES 60
           + MATLP+FHQLLTLSNPKSATILR RLPT  SQR FH+SILCCSSTSQSPEAN++SAES
Sbjct: 3   LGMATLPVFHQLLTLSNPKSATILRQRLPTSNSQRAFHVSILCCSSTSQSPEANVESAES 62

Query: 61  SINIGLELFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYRYAGEGKKAADCL 120
           S+N+GL+LFSKGRVKEALVQFEAAL+M+PNPMEAQAALYNKACCHAYR  GEGKKAADCL
Sbjct: 63  SVNLGLQLFSKGRVKEALVQFEAALDMNPNPMEAQAALYNKACCHAYR--GEGKKAADCL 122

Query: 121 RVALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAP 180
           RVALREY+LKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAP
Sbjct: 123 RVALREYDLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAP 182

Query: 181 FRGVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWETAGNLAVNVGGIVVFVAL 240
           FRGVRRFFYVALSAAAGISLLFN+PRL RAIQGG+EAPDVWET GNLAVNVGGIVVFVAL
Sbjct: 183 FRGVRRFFYVALSAAAGISLLFNLPRLFRAIQGGNEAPDVWETVGNLAVNVGGIVVFVAL 242

Query: 241 FLWDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVIIICADSSCFYNNS 300
           FLWDNKKEEEQLAQISRNETLSRLPLRLSTNR+VELVQLRDTVRP               
Sbjct: 243 FLWDNKKEEEQLAQISRNETLSRLPLRLSTNRVVELVQLRDTVRP--------------- 302

Query: 301 PTPSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAFQKTNERLVLQAILRDSK 360
                                                                       
Sbjct: 303 ------------------------------------------------------------ 362

Query: 361 VILAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQIEKKGFGAPATTAATAL 420
           VILAGKKETVS+AIQKAERFRTELLRRGVLLVPVIW +GRE+++EKKGFGAPA   + AL
Sbjct: 363 VILAGKKETVSSAIQKAERFRTELLRRGVLLVPVIWREGRETRMEKKGFGAPAPAGSAAL 422

Query: 421 PSIG-------------------VKSLAEVISPAEWESWIRDQQKSEGVTPGEDVYIILR 480
           PSIG                   ++  A+VISPAEWESWIRDQQKSEGVTPGEDVYIILR
Sbjct: 423 PSIGEDFEKRAQSITAKSKLKAEIRFRADVISPAEWESWIRDQQKSEGVTPGEDVYIILR 439

Query: 481 LDGRVRRSGRGMPDWQKIIEELPPMEALLSKLER 494
           LDGRVRRSGRGMPDWQKIIEELPPM+ALLSKLER
Sbjct: 483 LDGRVRRSGRGMPDWQKIIEELPPMDALLSKLER 439

[Close]

BLAST of ClCG10G010650 vs. NCBI nr
Match: XP_022983449.1 (protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 704.5 bits (1817), Expect = 6.4e-199
Identity = 380/514 (73.93%), Postives = 402/514 (78.21%), Query Frame = 0


Query: 1   MAMATLPLFHQLLTLSNPKSATILRPRLPT--SQRTFHLSILCCSSTSQSPEANLQSAES 60
           + MATLP+FHQLLTLSNPKSATILR RLPT  SQR FH+SILCCSSTSQSPE N++SAES
Sbjct: 3   LGMATLPVFHQLLTLSNPKSATILRQRLPTSNSQRAFHVSILCCSSTSQSPETNVESAES 62

Query: 61  SINIGLELFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYRYAGEGKKAADCL 120
           S+N+GL+LFSKGRVKEALVQFEAAL+M+PNPMEAQAALYNKACCHAYR  GEGKKAADCL
Sbjct: 63  SVNLGLQLFSKGRVKEALVQFEAALDMNPNPMEAQAALYNKACCHAYR--GEGKKAADCL 122

Query: 121 RVALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAP 180
           RVALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAP
Sbjct: 123 RVALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAP 182

Query: 181 FRGVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWETAGNLAVNVGGIVVFVAL 240
           FRGVRRFFYVALSAAAGISLLFN+PRL RAIQGG+EAPDVWET GNLAVNVGGIVVFVAL
Sbjct: 183 FRGVRRFFYVALSAAAGISLLFNLPRLFRAIQGGNEAPDVWETVGNLAVNVGGIVVFVAL 242

Query: 241 FLWDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVIIICADSSCFYNNS 300
           FLWDNKKEEEQLAQISRNETLSRLPLRLSTNR+VELVQLRDTVRP               
Sbjct: 243 FLWDNKKEEEQLAQISRNETLSRLPLRLSTNRVVELVQLRDTVRP--------------- 302

Query: 301 PTPSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAFQKTNERLVLQAILRDSK 360
                                                                       
Sbjct: 303 ------------------------------------------------------------ 362

Query: 361 VILAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQIEKKGFGAPATTAATAL 420
           VILAGKKETVS+AIQKAERFRTELLRRGVLLVPVIW +GRE ++EKKGFGAPA   + AL
Sbjct: 363 VILAGKKETVSSAIQKAERFRTELLRRGVLLVPVIWREGREPRMEKKGFGAPAPAGSAAL 422

Query: 421 PSIG-------------------VKSLAEVISPAEWESWIRDQQKSEGVTPGEDVYIILR 480
           PSIG                   ++  A+VISPAEWESWIRDQQKSEGVTPGEDVYIILR
Sbjct: 423 PSIGEDFEKRAQSITAKSKLKAEIRFRADVISPAEWESWIRDQQKSEGVTPGEDVYIILR 439

Query: 481 LDGRVRRSGRGMPDWQKIIEELPPMEALLSKLER 494
           LDGRVRRSGRGMPDWQKIIEELPPM+ALLSKLER
Sbjct: 483 LDGRVRRSGRGMPDWQKIIEELPPMDALLSKLER 439

[Close]

BLAST of ClCG10G010650 vs. ExPASy Swiss-Prot
Match: Q9SRY4 (Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LPA1 PE=1 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 4.5e-147
Identity = 299/531 (56.31%), Postives = 351/531 (66.10%), Query Frame = 0


Query: 1   MAMATLPLF--HQLLTLSNPKS-ATILRPRLPTSQRTF---------HLSILCCSSTSQS 60
           MA+AT P    H    +SN  S     RP LP    T          HL +   SS+S S
Sbjct: 1   MAVATAPSLNRHFPRRISNLYSRVKQRRPWLPPGDATLFNSRRNWDSHLFVYASSSSSPS 60

Query: 61  ---PEANLQ----SAESSINIGLELFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKAC 120
              P  N      +AE  +N GL+LF +GRVK+ALVQFE AL++ PNP+E+QAA YNKAC
Sbjct: 61  SSPPSPNSPTDDLTAELCVNTGLDLFKRGRVKDALVQFETALSLAPNPIESQAAYYNKAC 120

Query: 121 CHAYRYAGEGKKAADCLRVALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDI 180
           CHAYR  GEGKKA DCLR+ALR+YNLKF TILNDPDLASFRALPEFKELQEEAR+GGEDI
Sbjct: 121 CHAYR--GEGKKAVDCLRIALRDYNLKFATILNDPDLASFRALPEFKELQEEARLGGEDI 180

Query: 181 GYGFRRDLKLISEVQAPFRGVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWET 240
           G  FRRDLKLISEV+APFRGVR+FFY A +AAAGIS+ F +PRL++AI+GGD AP++ ET
Sbjct: 181 GDNFRRDLKLISEVRAPFRGVRKFFYFAFAAAAGISMFFTVPRLVQAIRGGDGAPNLLET 240

Query: 241 AGNLAVNVGGIVVFVALFLWDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTV 300
            GN A+N+GGIVV V+LFLW+NKKEEEQ+ QI+R+ETLSRLPLRLSTNR+VELVQLRDTV
Sbjct: 241 TGNAAINIGGIVVMVSLFLWENKKEEEQMVQITRDETLSRLPLRLSTNRVVELVQLRDTV 300

Query: 301 RPVIIICADSSCFYNNSPTPSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAF 360
           RP                                                          
Sbjct: 301 RP---------------------------------------------------------- 360

Query: 361 QKTNERLVLQAILRDSKVILAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQ 420
                            VILAGKKETV+ A+QKA+RFRTELLRRGVLLVPV+WG+ +  +
Sbjct: 361 -----------------VILAGKKETVTLAMQKADRFRTELLRRGVLLVPVVWGERKTPE 420

Query: 421 IEKKGFGAPATTAATALPSIG-------------------VKSLAEVISPAEWESWIRDQ 480
           IEKKGFGA ++ AAT+LPSIG                   ++  AE +SP EWE WIRDQ
Sbjct: 421 IEKKGFGA-SSKAATSLPSIGEDFDTRAQSVVAQSKLKGEIRFKAETVSPGEWERWIRDQ 453

Query: 481 QKSEGVTPGEDVYIILRLDGRVRRSGRGMPDWQKIIEELPPMEALLSKLER 494
           Q SEGV PG+DVYIILRLDGRVRRSGRGMPDW +I +ELPPM+ +LSKLER
Sbjct: 481 QISEGVNPGDDVYIILRLDGRVRRSGRGMPDWAEISKELPPMDDVLSKLER 453

[Close]

BLAST of ClCG10G010650 vs. ExPASy TrEMBL
Match: A0A5A7TR76 (Protein LOW PSII ACCUMULATION 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G00940 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.9e-204
Identity = 393/512 (76.76%), Postives = 403/512 (78.71%), Query Frame = 0


Query: 1   MAMATLPLFHQLLTLSNPKSATILRPRLPTSQRTFHLSILCCSSTSQSPEANLQSAESSI 60
           MAMATLPLFH L TLSNPKS TILRPRLPTSQRTFHLSIL CSSTSQSPEANLQSAES +
Sbjct: 1   MAMATLPLFHHLPTLSNPKSPTILRPRLPTSQRTFHLSILSCSSTSQSPEANLQSAESCV 60

Query: 61  NIGLELFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYRYAGEGKKAADCLRV 120
           N+GL+LFSKGRVKEALVQFEAALNMDPNPMEAQAA YNKACCHAYR  GEGKKAADCLRV
Sbjct: 61  NLGLQLFSKGRVKEALVQFEAALNMDPNPMEAQAAFYNKACCHAYR--GEGKKAADCLRV 120

Query: 121 ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR 180
           ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR
Sbjct: 121 ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR 180

Query: 181 GVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWETAGNLAVNVGGIVVFVALFL 240
           GVRRFFYVALSAAAGISLLFNIPRL RAIQGGD APDVWETAGNLAVNVGGI+VFVALFL
Sbjct: 181 GVRRFFYVALSAAAGISLLFNIPRLFRAIQGGDGAPDVWETAGNLAVNVGGIIVFVALFL 240

Query: 241 WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVIIICADSSCFYNNSPT 300
           WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRP                 
Sbjct: 241 WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRP----------------- 300

Query: 301 PSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAFQKTNERLVLQAILRDSKVI 360
                                                                     VI
Sbjct: 301 ----------------------------------------------------------VI 360

Query: 361 LAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQIEKKGFGAPATTAATALPS 420
           LAGKKETVS+AIQKAERFRTELLRRGVLLVPVIWG+GRE QIEKKGFGAPA  AATALPS
Sbjct: 361 LAGKKETVSSAIQKAERFRTELLRRGVLLVPVIWGEGREPQIEKKGFGAPA-AAATALPS 420

Query: 421 IG-------------------VKSLAEVISPAEWESWIRDQQKSEGVTPGEDVYIILRLD 480
           IG                   ++  AEVISPAEWESWIRDQQKSEGVTPGEDVYIILRLD
Sbjct: 421 IGEDFEKRAQSITAKSKLKAEIRFRAEVISPAEWESWIRDQQKSEGVTPGEDVYIILRLD 434

Query: 481 GRVRRSGRGMPDWQKIIEELPPMEALLSKLER 494
           GR+RRSGRGMPDWQKIIEELPPMEALLSKLE+
Sbjct: 481 GRIRRSGRGMPDWQKIIEELPPMEALLSKLEK 434

[Close]

BLAST of ClCG10G010650 vs. ExPASy TrEMBL
Match: A0A1S3BYE8 (protein LOW PSII ACCUMULATION 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494784 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.9e-204
Identity = 393/512 (76.76%), Postives = 403/512 (78.71%), Query Frame = 0


Query: 1   MAMATLPLFHQLLTLSNPKSATILRPRLPTSQRTFHLSILCCSSTSQSPEANLQSAESSI 60
           MAMATLPLFH L TLSNPKS TILRPRLPTSQRTFHLSIL CSSTSQSPEANLQSAES +
Sbjct: 1   MAMATLPLFHHLPTLSNPKSPTILRPRLPTSQRTFHLSILSCSSTSQSPEANLQSAESCV 60

Query: 61  NIGLELFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYRYAGEGKKAADCLRV 120
           N+GL+LFSKGRVKEALVQFEAALNMDPNPMEAQAA YNKACCHAYR  GEGKKAADCLRV
Sbjct: 61  NLGLQLFSKGRVKEALVQFEAALNMDPNPMEAQAAFYNKACCHAYR--GEGKKAADCLRV 120

Query: 121 ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR 180
           ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR
Sbjct: 121 ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR 180

Query: 181 GVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWETAGNLAVNVGGIVVFVALFL 240
           GVRRFFYVALSAAAGISLLFNIPRL RAIQGGD APDVWETAGNLAVNVGGI+VFVALFL
Sbjct: 181 GVRRFFYVALSAAAGISLLFNIPRLFRAIQGGDGAPDVWETAGNLAVNVGGIIVFVALFL 240

Query: 241 WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVIIICADSSCFYNNSPT 300
           WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRP                 
Sbjct: 241 WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRP----------------- 300

Query: 301 PSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAFQKTNERLVLQAILRDSKVI 360
                                                                     VI
Sbjct: 301 ----------------------------------------------------------VI 360

Query: 361 LAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQIEKKGFGAPATTAATALPS 420
           LAGKKETVS+AIQKAERFRTELLRRGVLLVPVIWG+GRE QIEKKGFGAPA  AATALPS
Sbjct: 361 LAGKKETVSSAIQKAERFRTELLRRGVLLVPVIWGEGREPQIEKKGFGAPA-AAATALPS 420

Query: 421 IG-------------------VKSLAEVISPAEWESWIRDQQKSEGVTPGEDVYIILRLD 480
           IG                   ++  AEVISPAEWESWIRDQQKSEGVTPGEDVYIILRLD
Sbjct: 421 IGEDFEKRAQSITAKSKLKAEIRFRAEVISPAEWESWIRDQQKSEGVTPGEDVYIILRLD 434

Query: 481 GRVRRSGRGMPDWQKIIEELPPMEALLSKLER 494
           GR+RRSGRGMPDWQKIIEELPPMEALLSKLE+
Sbjct: 481 GRIRRSGRGMPDWQKIIEELPPMEALLSKLEK 434

[Close]

BLAST of ClCG10G010650 vs. ExPASy TrEMBL
Match: A0A0A0KT96 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001650 PE=4 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 2.1e-203
Identity = 390/512 (76.17%), Postives = 401/512 (78.32%), Query Frame = 0


Query: 1   MAMATLPLFHQLLTLSNPKSATILRPRLPTSQRTFHLSILCCSSTSQSPEANLQSAESSI 60
           MAMATLPLFH L TLSNPKS TILRPRLPTSQRTF LSIL CSSTSQSPEANLQSAES +
Sbjct: 1   MAMATLPLFHHLPTLSNPKSLTILRPRLPTSQRTFRLSILSCSSTSQSPEANLQSAESCV 60

Query: 61  NIGLELFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYRYAGEGKKAADCLRV 120
           N GL+LFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYR  GEGKKAADCLRV
Sbjct: 61  NFGLQLFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYR--GEGKKAADCLRV 120

Query: 121 ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR 180
           ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR
Sbjct: 121 ALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAPFR 180

Query: 181 GVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWETAGNLAVNVGGIVVFVALFL 240
           GVR+FFYVALSAAAGISLLFNIPRL RAIQGGD APDVWETAGNLAVNVGGI+VFVALFL
Sbjct: 181 GVRKFFYVALSAAAGISLLFNIPRLFRAIQGGDGAPDVWETAGNLAVNVGGIIVFVALFL 240

Query: 241 WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVIIICADSSCFYNNSPT 300
           WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRP                 
Sbjct: 241 WDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRP----------------- 300

Query: 301 PSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAFQKTNERLVLQAILRDSKVI 360
                                                                     VI
Sbjct: 301 ----------------------------------------------------------VI 360

Query: 361 LAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQIEKKGFGAPATTAATALPS 420
           LAGKKETVS+AIQKAERFRTELLRRGVLLVPVIWG+GRE QIEKKGFGAP T AA ALPS
Sbjct: 361 LAGKKETVSSAIQKAERFRTELLRRGVLLVPVIWGEGREPQIEKKGFGAPTTAAAAALPS 420

Query: 421 IG-------------------VKSLAEVISPAEWESWIRDQQKSEGVTPGEDVYIILRLD 480
           IG                   ++  AEVISPAEWESWIR+QQ+SEGVTPGEDVYIILRLD
Sbjct: 421 IGEDFEKRAQSITAKSKLKAEIRFRAEVISPAEWESWIRNQQESEGVTPGEDVYIILRLD 435

Query: 481 GRVRRSGRGMPDWQKIIEELPPMEALLSKLER 494
           GRVRRSGRGMPDWQKIIEELPPMEALLSKLE+
Sbjct: 481 GRVRRSGRGMPDWQKIIEELPPMEALLSKLEK 435

[Close]

BLAST of ClCG10G010650 vs. ExPASy TrEMBL
Match: A0A6J1F472 (protein LOW PSII ACCUMULATION 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111442233 PE=4 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 2.4e-199
Identity = 380/514 (73.93%), Postives = 404/514 (78.60%), Query Frame = 0


Query: 1   MAMATLPLFHQLLTLSNPKSATILRPRLPT--SQRTFHLSILCCSSTSQSPEANLQSAES 60
           + MATLP+FHQLLTLSNPKSATILR RLPT  SQR FH+SILCCSSTSQSPEAN++SAES
Sbjct: 3   LGMATLPVFHQLLTLSNPKSATILRQRLPTSNSQRAFHVSILCCSSTSQSPEANVESAES 62

Query: 61  SINIGLELFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYRYAGEGKKAADCL 120
           S+N+GL+LFSKGRVKEALVQFEAAL+M+PNPMEAQAALYNKACCHAYR  GEGKKAADCL
Sbjct: 63  SVNLGLQLFSKGRVKEALVQFEAALDMNPNPMEAQAALYNKACCHAYR--GEGKKAADCL 122

Query: 121 RVALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAP 180
           RVALREY+LKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAP
Sbjct: 123 RVALREYDLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAP 182

Query: 181 FRGVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWETAGNLAVNVGGIVVFVAL 240
           FRGVRRFFYVALSAAAGISLLFN+PRL RAIQGG+EAPDVWET GNLAVNVGGIVVFVAL
Sbjct: 183 FRGVRRFFYVALSAAAGISLLFNLPRLFRAIQGGNEAPDVWETVGNLAVNVGGIVVFVAL 242

Query: 241 FLWDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVIIICADSSCFYNNS 300
           FLWDNKKEEEQLAQISRNETLSRLPLRLSTNR+VELVQLRDTVRP               
Sbjct: 243 FLWDNKKEEEQLAQISRNETLSRLPLRLSTNRVVELVQLRDTVRP--------------- 302

Query: 301 PTPSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAFQKTNERLVLQAILRDSK 360
                                                                       
Sbjct: 303 ------------------------------------------------------------ 362

Query: 361 VILAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQIEKKGFGAPATTAATAL 420
           VILAGKKETVS+AIQKAERFRTELLRRGVLLVPVIW +GRE+++EKKGFGAPA   + AL
Sbjct: 363 VILAGKKETVSSAIQKAERFRTELLRRGVLLVPVIWREGRETRMEKKGFGAPAPAGSAAL 422

Query: 421 PSIG-------------------VKSLAEVISPAEWESWIRDQQKSEGVTPGEDVYIILR 480
           PSIG                   ++  A+VISPAEWESWIRDQQKSEGVTPGEDVYIILR
Sbjct: 423 PSIGEDFEKRAQSITAKSKLKAEIRFRADVISPAEWESWIRDQQKSEGVTPGEDVYIILR 439

Query: 481 LDGRVRRSGRGMPDWQKIIEELPPMEALLSKLER 494
           LDGRVRRSGRGMPDWQKIIEELPPM+ALLSKLER
Sbjct: 483 LDGRVRRSGRGMPDWQKIIEELPPMDALLSKLER 439

[Close]

BLAST of ClCG10G010650 vs. ExPASy TrEMBL
Match: A0A6J1J7F4 (protein LOW PSII ACCUMULATION 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482050 PE=4 SV=1)

HSP 1 Score: 704.5 bits (1817), Expect = 3.1e-199
Identity = 380/514 (73.93%), Postives = 402/514 (78.21%), Query Frame = 0


Query: 1   MAMATLPLFHQLLTLSNPKSATILRPRLPT--SQRTFHLSILCCSSTSQSPEANLQSAES 60
           + MATLP+FHQLLTLSNPKSATILR RLPT  SQR FH+SILCCSSTSQSPE N++SAES
Sbjct: 3   LGMATLPVFHQLLTLSNPKSATILRQRLPTSNSQRAFHVSILCCSSTSQSPETNVESAES 62

Query: 61  SINIGLELFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKACCHAYRYAGEGKKAADCL 120
           S+N+GL+LFSKGRVKEALVQFEAAL+M+PNPMEAQAALYNKACCHAYR  GEGKKAADCL
Sbjct: 63  SVNLGLQLFSKGRVKEALVQFEAALDMNPNPMEAQAALYNKACCHAYR--GEGKKAADCL 122

Query: 121 RVALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAP 180
           RVALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAP
Sbjct: 123 RVALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDIGYGFRRDLKLISEVQAP 182

Query: 181 FRGVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWETAGNLAVNVGGIVVFVAL 240
           FRGVRRFFYVALSAAAGISLLFN+PRL RAIQGG+EAPDVWET GNLAVNVGGIVVFVAL
Sbjct: 183 FRGVRRFFYVALSAAAGISLLFNLPRLFRAIQGGNEAPDVWETVGNLAVNVGGIVVFVAL 242

Query: 241 FLWDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVIIICADSSCFYNNS 300
           FLWDNKKEEEQLAQISRNETLSRLPLRLSTNR+VELVQLRDTVRP               
Sbjct: 243 FLWDNKKEEEQLAQISRNETLSRLPLRLSTNRVVELVQLRDTVRP--------------- 302

Query: 301 PTPSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAFQKTNERLVLQAILRDSK 360
                                                                       
Sbjct: 303 ------------------------------------------------------------ 362

Query: 361 VILAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQIEKKGFGAPATTAATAL 420
           VILAGKKETVS+AIQKAERFRTELLRRGVLLVPVIW +GRE ++EKKGFGAPA   + AL
Sbjct: 363 VILAGKKETVSSAIQKAERFRTELLRRGVLLVPVIWREGREPRMEKKGFGAPAPAGSAAL 422

Query: 421 PSIG-------------------VKSLAEVISPAEWESWIRDQQKSEGVTPGEDVYIILR 480
           PSIG                   ++  A+VISPAEWESWIRDQQKSEGVTPGEDVYIILR
Sbjct: 423 PSIGEDFEKRAQSITAKSKLKAEIRFRADVISPAEWESWIRDQQKSEGVTPGEDVYIILR 439

Query: 481 LDGRVRRSGRGMPDWQKIIEELPPMEALLSKLER 494
           LDGRVRRSGRGMPDWQKIIEELPPM+ALLSKLER
Sbjct: 483 LDGRVRRSGRGMPDWQKIIEELPPMDALLSKLER 439

[Close]

BLAST of ClCG10G010650 vs. TAIR 10
Match: AT1G02910.1 (tetratricopeptide repeat (TPR)-containing protein )

HSP 1 Score: 522.7 bits (1345), Expect = 3.2e-148
Identity = 299/531 (56.31%), Postives = 351/531 (66.10%), Query Frame = 0


Query: 1   MAMATLPLF--HQLLTLSNPKS-ATILRPRLPTSQRTF---------HLSILCCSSTSQS 60
           MA+AT P    H    +SN  S     RP LP    T          HL +   SS+S S
Sbjct: 1   MAVATAPSLNRHFPRRISNLYSRVKQRRPWLPPGDATLFNSRRNWDSHLFVYASSSSSPS 60

Query: 61  ---PEANLQ----SAESSINIGLELFSKGRVKEALVQFEAALNMDPNPMEAQAALYNKAC 120
              P  N      +AE  +N GL+LF +GRVK+ALVQFE AL++ PNP+E+QAA YNKAC
Sbjct: 61  SSPPSPNSPTDDLTAELCVNTGLDLFKRGRVKDALVQFETALSLAPNPIESQAAYYNKAC 120

Query: 121 CHAYRYAGEGKKAADCLRVALREYNLKFGTILNDPDLASFRALPEFKELQEEARMGGEDI 180
           CHAYR  GEGKKA DCLR+ALR+YNLKF TILNDPDLASFRALPEFKELQEEAR+GGEDI
Sbjct: 121 CHAYR--GEGKKAVDCLRIALRDYNLKFATILNDPDLASFRALPEFKELQEEARLGGEDI 180

Query: 181 GYGFRRDLKLISEVQAPFRGVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWET 240
           G  FRRDLKLISEV+APFRGVR+FFY A +AAAGIS+ F +PRL++AI+GGD AP++ ET
Sbjct: 181 GDNFRRDLKLISEVRAPFRGVRKFFYFAFAAAAGISMFFTVPRLVQAIRGGDGAPNLLET 240

Query: 241 AGNLAVNVGGIVVFVALFLWDNKKEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTV 300
            GN A+N+GGIVV V+LFLW+NKKEEEQ+ QI+R+ETLSRLPLRLSTNR+VELVQLRDTV
Sbjct: 241 TGNAAINIGGIVVMVSLFLWENKKEEEQMVQITRDETLSRLPLRLSTNRVVELVQLRDTV 300

Query: 301 RPVIIICADSSCFYNNSPTPSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAF 360
           RP                                                          
Sbjct: 301 RP---------------------------------------------------------- 360

Query: 361 QKTNERLVLQAILRDSKVILAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQ 420
                            VILAGKKETV+ A+QKA+RFRTELLRRGVLLVPV+WG+ +  +
Sbjct: 361 -----------------VILAGKKETVTLAMQKADRFRTELLRRGVLLVPVVWGERKTPE 420

Query: 421 IEKKGFGAPATTAATALPSIG-------------------VKSLAEVISPAEWESWIRDQ 480
           IEKKGFGA ++ AAT+LPSIG                   ++  AE +SP EWE WIRDQ
Sbjct: 421 IEKKGFGA-SSKAATSLPSIGEDFDTRAQSVVAQSKLKGEIRFKAETVSPGEWERWIRDQ 453

Query: 481 QKSEGVTPGEDVYIILRLDGRVRRSGRGMPDWQKIIEELPPMEALLSKLER 494
           Q SEGV PG+DVYIILRLDGRVRRSGRGMPDW +I +ELPPM+ +LSKLER
Sbjct: 481 QISEGVNPGDDVYIILRLDGRVRRSGRGMPDWAEISKELPPMDDVLSKLER 453

[Close]

BLAST of ClCG10G010650 vs. TAIR 10
Match: AT4G28740.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 107.8 bits (268), Expect = 2.5e-23
Identity = 86/327 (26.30%), Postives = 135/327 (41.28%), Query Frame = 0


Query: 168 DLKLISEVQAPFRGVRRFFYVALSAAAGISLLFNIPRLIRAIQGGDEAPDVWETAGNLAV 227
           D ++ SEV +PFR VR FFY+A  A+  +  L    RLI A+     + +V E    L V
Sbjct: 94  DARIRSEVLSPFRSVRMFFYLAFIASGSLGGLIATSRLIGALANPARSGEVLEIVKGLGV 153

Query: 228 NVGGIVVFVALFLWDNKKEEEQLAQISRNETLSRLPLRL-STNRIVELVQLRDTVRPVII 287
           ++G   +F  L+  +NK +  Q+A++SR E L +L +R+   N+++ +  LR   R  ++
Sbjct: 154 DIGAASLFAFLYFNENKTKNAQMARLSREENLGKLKMRVEENNKVISVGDLRGVAR--LV 213

Query: 288 ICADSSCFYNNSPTPSTKAASVCSIYKILWTYFAIFPVVHIYCFKSVIHHVNNAFQKTNE 347
           IC                                                          
Sbjct: 214 IC---------------------------------------------------------- 273

Query: 348 RLVLQAILRDSKVILAGKKETVSAAIQKAERFRTELLRRGVLLVPVIWGQGRESQIEKKG 407
                          AG  E +  A ++++ +   L+ RGV++V      G    +E   
Sbjct: 274 ---------------AGPAEFIEEAFKRSKEYTQGLVERGVVVVAYA-TDGNSPVLE--- 333

Query: 408 FGAPATTAATALPSIGVKSLAEV--ISPAEWESWIRDQQKSEGVTPGEDVYIILRLDGRV 467
                T  A    S   K L  V  +   EWE W+ +Q+K   V+    VY+ LRLDGRV
Sbjct: 334 --FDETDIADEEMSQRRKKLWRVTPVFVPEWEKWLNEQKKLANVSSDSPVYLSLRLDGRV 339

Query: 468 RRSGRGMPDWQKIIEELPPMEALLSKL 492
           R SG G P WQ  + +LPP++ + + L
Sbjct: 394 RASGVGYPPWQAFVAQLPPVKGMWTGL 339

The following BLAST results are available for this feature:

BLAST of ClCG10G010650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454363.1	3.9e-204	76.76	PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic isoform X1 [Cucumis me...	[more]
XP_004152258.2	4.3e-203	76.17	protein LOW PSII ACCUMULATION 1, chloroplastic [Cucumis sativus] >KGN52798.1 hyp...	[more]
XP_038905239.1	2.0e-200	75.98	protein LOW PSII ACCUMULATION 1, chloroplastic [Benincasa hispida]	[more]
XP_022935311.1	4.9e-199	73.93	protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita moschata]	[more]
XP_022983449.1	6.4e-199	73.93	protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita maxima]	[more]

BLAST of ClCG10G010650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRY4	4.5e-147	56.31	Protein LOW PSII ACCUMULATION 1, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of ClCG10G010650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TR76	1.9e-204	76.76	Protein LOW PSII ACCUMULATION 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3BYE8	1.9e-204	76.76	protein LOW PSII ACCUMULATION 1, chloroplastic isoform X1 OS=Cucumis melo OX=365...	[more]
A0A0A0KT96	2.1e-203	76.17	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001650 ...	[more]
A0A6J1F472	2.4e-199	73.93	protein LOW PSII ACCUMULATION 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1J7F4	3.1e-199	73.93	protein LOW PSII ACCUMULATION 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of ClCG10G010650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02910.1	3.2e-148	56.31	tetratricopeptide repeat (TPR)-containing protein	[more]
AT4G28740.1	2.5e-23	26.30	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 56..89 e-value: 0.0084 score: 25.3
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 56..89 score: 9.9419
IPR021883	Protein LOW PSII ACCUMULATION 1-like	PFAM	PF11998	DUF3493	coord: 166..243 e-value: 2.2E-25 score: 88.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 42..144 e-value: 1.4E-7 score: 33.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 49..124
None	No IPR available	PANTHER	PTHR35498	PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC	coord: 351..493
None	No IPR available	PANTHER	PTHR35498:SF4	PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC	coord: 32..286
None	No IPR available	PANTHER	PTHR35498	PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC	coord: 32..286
None	No IPR available	PANTHER	PTHR35498:SF4	PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC	coord: 351..493

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G010650.2	ClCG10G010650.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010270	photosystem II oxygen evolving complex assembly
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding