ClCG10G009410 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G009410
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	classical arabinogalactan protein 4
Location	CG_Chr10: 21306916 .. 21307488 (+)
RNA-Seq Expression	ClCG10G009410
Synteny	ClCG10G009410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTCCACCGTTCTGCATGTTCTCACGGTGGCGCTCTTGCTGATCTCCGCCGCTGCAACATCCCCAGTACCATCTCCAGCGCCGAGCCCCGAATCACCGGCGTGGAAATGGACTCCCAATAACGAGCCACCATCCTCTCCACCGACGGCGGAACCGCCTACGGCGTCGTCCCCATCTTCCCCAACAATGTCTCCGCCGGCCACCCCACCGGAGCTCAGCCCCGTTCCATCATCCCATGCACCGATTTTACCACCCAAGGCTAACCCACCCGCATTGTCGCCGACCGCTCCACCGCCGGCGGTGAAGAGCCCCAGTCATGCGCCATCCCCGGCAAAAACGAAAGCACCGGCTCCGGCTCCGTCGAAAATGAGCCCACCACCGGCCAAGGCACCGAAATCTTCTCAAGCTCCGGCGAGTAGTCCCCCATCACCAAATGGAAGTATGGAGCCACCAGCGCCATCCGTAGCTCCGGCAGCGCCGAAGCAGAGTAACAGCGGCGGTGCAAACAGATTCGCCATTGGTGGGTCTGTTGCAGTTGGATTAATGATTGCGGCTTTAATCGCTTAA

mRNA sequence

ATGGCTTCCTCCACCGTTCTGCATGTTCTCACGGTGGCGCTCTTGCTGATCTCCGCCGCTGCAACATCCCCAGTACCATCTCCAGCGCCGAGCCCCGAATCACCGGCGTGGAAATGGACTCCCAATAACGAGCCACCATCCTCTCCACCGACGGCGGAACCGCCTACGGCGTCGTCCCCATCTTCCCCAACAATGTCTCCGCCGGCCACCCCACCGGAGCTCAGCCCCGTTCCATCATCCCATGCACCGATTTTACCACCCAAGGCTAACCCACCCGCATTGTCGCCGACCGCTCCACCGCCGGCGGTGAAGAGCCCCAGTCATGCGCCATCCCCGGCAAAAACGAAAGCACCGGCTCCGGCTCCGTCGAAAATGAGCCCACCACCGGCCAAGGCACCGAAATCTTCTCAAGCTCCGGCGAGTAGTCCCCCATCACCAAATGGAAGTATGGAGCCACCAGCGCCATCCGTAGCTCCGGCAGCGCCGAAGCAGAGTAACAGCGGCGGTGCAAACAGATTCGCCATTGGTGGGTCTGTTGCAGTTGGATTAATGATTGCGGCTTTAATCGCTTAA

Coding sequence (CDS)

ATGGCTTCCTCCACCGTTCTGCATGTTCTCACGGTGGCGCTCTTGCTGATCTCCGCCGCTGCAACATCCCCAGTACCATCTCCAGCGCCGAGCCCCGAATCACCGGCGTGGAAATGGACTCCCAATAACGAGCCACCATCCTCTCCACCGACGGCGGAACCGCCTACGGCGTCGTCCCCATCTTCCCCAACAATGTCTCCGCCGGCCACCCCACCGGAGCTCAGCCCCGTTCCATCATCCCATGCACCGATTTTACCACCCAAGGCTAACCCACCCGCATTGTCGCCGACCGCTCCACCGCCGGCGGTGAAGAGCCCCAGTCATGCGCCATCCCCGGCAAAAACGAAAGCACCGGCTCCGGCTCCGTCGAAAATGAGCCCACCACCGGCCAAGGCACCGAAATCTTCTCAAGCTCCGGCGAGTAGTCCCCCATCACCAAATGGAAGTATGGAGCCACCAGCGCCATCCGTAGCTCCGGCAGCGCCGAAGCAGAGTAACAGCGGCGGTGCAAACAGATTCGCCATTGGTGGGTCTGTTGCAGTTGGATTAATGATTGCGGCTTTAATCGCTTAA

Protein sequence

MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSPSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTKAPAPAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVAVGLMIAALIA

Homology

[Close]

BLAST of ClCG10G009410 vs. NCBI nr
Match: XP_038877309.1 (vegetative cell wall protein gp1-like [Benincasa hispida])

HSP 1 Score: 266.2 bits (679), Expect = 2.2e-67
Identity = 164/190 (86.32%), Postives = 172/190 (90.53%), Query Frame = 0


Query: 1   MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSP 60
           MASSTVL VLTVALLLISAAA SPVPSPAP PESPAWKWTP+NEPPSSPP AEPP  +SP
Sbjct: 1   MASSTVLIVLTVALLLISAAANSPVPSPAPGPESPAWKWTPSNEPPSSPPMAEPPMTTSP 60

Query: 61  SSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTKAPAP 120
            SPT+SPPATPPE+SP+PSS+AP LPPKANPP LSPTA PP VKSPSHAPSPAKTKAPAP
Sbjct: 61  PSPTISPPATPPEISPIPSSYAPTLPPKANPPTLSPTAQPPVVKSPSHAPSPAKTKAPAP 120

Query: 121 APSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVA 180
           APSKMSP PAKAPKSS+APASSPPSPNG MEPPAPSVAPA  K+ N G ANRFAIGGSVA
Sbjct: 121 APSKMSPSPAKAPKSSKAPASSPPSPNGMMEPPAPSVAPAPSKKDNGGAANRFAIGGSVA 180

Query: 181 VGLMIAALIA 191
           VGLMIAALIA
Sbjct: 181 VGLMIAALIA 190

[Close]

BLAST of ClCG10G009410 vs. NCBI nr
Match: XP_008462882.1 (PREDICTED: classical arabinogalactan protein 4 [Cucumis melo] >KAA0061156.1 classical arabinogalactan protein 4 [Cucumis melo var. makuwa] >TYK29917.1 classical arabinogalactan protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 243.0 bits (619), Expect = 2.0e-60
Identity = 151/191 (79.06%), Postives = 164/191 (85.86%), Query Frame = 0


Query: 1   MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASS 60
           MASST+L++LT+A LLISAAA SP PSPAPS ESP WKWTP N+PPSSPPTAEPP T +S
Sbjct: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60

Query: 61  PSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTKAPA 120
           P SPT+SPPATPPELSPVPSS++P  PP ANPP LSPTAPPPAV SPSHAPSPAKTKAPA
Sbjct: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120

Query: 121 PAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSV 180
           PAPSK+SP PAKAPKSS+AP SSPPSPNG MEPP PS APA  K+ N  GANRFAIGGS+
Sbjct: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180

Query: 181 AVGLMIAALIA 191
           A G MIAA IA
Sbjct: 181 AAGFMIAAFIA 191

[Close]

BLAST of ClCG10G009410 vs. NCBI nr
Match: XP_011654351.1 (classical arabinogalactan protein 4 [Cucumis sativus])

HSP 1 Score: 240.7 bits (613), Expect = 1.0e-59
Identity = 152/191 (79.58%), Postives = 165/191 (86.39%), Query Frame = 0


Query: 1   MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASS 60
           MASST+L++LT+A LLIS AA SP PSPAP+ ESP WKWTP+NEPPSSPPTAEPP T +S
Sbjct: 1   MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTS 60

Query: 61  PSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTKAPA 120
           P SPT+SPP TPPELSPVP+S+AP  PP ANPP LSPTAPPPAVKSPSHAPSPAKTKAPA
Sbjct: 61  PPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAPPPAVKSPSHAPSPAKTKAPA 120

Query: 121 PAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSV 180
           PAPSK SP PAKAPKSS+AP SSPPSPNG MEPP PSVAPA  K+ N  GANRFAIGGS+
Sbjct: 121 PAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSI 180

Query: 181 AVGLMIAALIA 191
           A GLMIAA IA
Sbjct: 181 A-GLMIAAFIA 190

[Close]

BLAST of ClCG10G009410 vs. NCBI nr
Match: KAE8649311.1 (hypothetical protein Csa_014808 [Cucumis sativus])

HSP 1 Score: 226.1 bits (575), Expect = 2.6e-55
Identity = 140/176 (79.55%), Postives = 152/176 (86.36%), Query Frame = 0


Query: 1   MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASS 60
           MASST+L++LT+A LLIS AA SP PSPAP+ ESP WKWTP+NEPPSSPPTAEPP T +S
Sbjct: 1   MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTS 60

Query: 61  PSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTKAPA 120
           P SPT+SPP TPPELSPVP+S+AP  PP ANPP LSPTAPPPAVKSPSHAPSPAKTKAPA
Sbjct: 61  PPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAPPPAVKSPSHAPSPAKTKAPA 120

Query: 121 PAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAI 176
           PAPSK SP PAKAPKSS+AP SSPPSPNG MEPP PSVAPA  K+ N  GANRFAI
Sbjct: 121 PAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAI 176

[Close]

BLAST of ClCG10G009410 vs. NCBI nr
Match: KAG7014869.1 (hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211.8 bits (538), Expect = 5.0e-51
Identity = 139/190 (73.16%), Postives = 147/190 (77.37%), Query Frame = 0


Query: 1   MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSP 60
           MAS  VL+V+T ALLLISAAA SP+PSPAPSPESP WKWTP+ E PSSPP  EPP     
Sbjct: 1   MASFAVLNVITAALLLISAAANSPLPSPAPSPESPPWKWTPDTESPSSPPEMEPP----- 60

Query: 61  SSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTKAPAP 120
                SP  +PPELSPVPSS  P  PP ANPP LSP A PPAVKSP HAPSP+KTKAPAP
Sbjct: 61  -----SPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAPSPSKTKAPAP 120

Query: 121 APSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVA 180
           APSKMSP PA+APKSS  P SSPP+PNG MEPP PSVAP APK  N G ANRFAIGGSVA
Sbjct: 121 APSKMSPTPARAPKSSAPPVSSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAIGGSVA 180

Query: 181 VGLMIAALIA 191
            GLM AALIA
Sbjct: 181 FGLMAAALIA 180

[Close]

BLAST of ClCG10G009410 vs. ExPASy Swiss-Prot
Match: Q9FPQ6 (Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 8.1e-04
Identity = 63/156 (40.38%), Postives = 78/156 (50.00%), Query Frame = 0


Query: 18  SAAATSPVPSPAPSPESPAWKWTPNNEPPS-SPPTAEPPTASSPSSPTMSPPATPPELSP 77
           S A  SP P P+P+P SPA    P+  PPS SPP    P+  SP+ P    PA P    P
Sbjct: 100 SPAPPSPAP-PSPAPPSPAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSPSPP 159

Query: 78  VPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTKAPAPAPSKMSP--------- 137
           VP S +P +PP   PP+ +P +P P V      PSPA    P+PAP   +P         
Sbjct: 160 VPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPP 219

Query: 138 -PPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAP 163
            PP+ AP S  +PA   PSP     P  PS AP +P
Sbjct: 220 SPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSP 254

[Close]

BLAST of ClCG10G009410 vs. ExPASy TrEMBL
Match: A0A5A7V3Q7 (Classical arabinogalactan protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00010 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 9.8e-61
Identity = 151/191 (79.06%), Postives = 164/191 (85.86%), Query Frame = 0


Query: 1   MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASS 60
           MASST+L++LT+A LLISAAA SP PSPAPS ESP WKWTP N+PPSSPPTAEPP T +S
Sbjct: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60

Query: 61  PSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTKAPA 120
           P SPT+SPPATPPELSPVPSS++P  PP ANPP LSPTAPPPAV SPSHAPSPAKTKAPA
Sbjct: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120

Query: 121 PAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSV 180
           PAPSK+SP PAKAPKSS+AP SSPPSPNG MEPP PS APA  K+ N  GANRFAIGGS+
Sbjct: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180

Query: 181 AVGLMIAALIA 191
           A G MIAA IA
Sbjct: 181 AAGFMIAAFIA 191

[Close]

BLAST of ClCG10G009410 vs. ExPASy TrEMBL
Match: A0A1S3CHW9 (classical arabinogalactan protein 4 OS=Cucumis melo OX=3656 GN=LOC103501160 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 9.8e-61
Identity = 151/191 (79.06%), Postives = 164/191 (85.86%), Query Frame = 0


Query: 1   MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASS 60
           MASST+L++LT+A LLISAAA SP PSPAPS ESP WKWTP N+PPSSPPTAEPP T +S
Sbjct: 1   MASSTLLNLLTLAFLLISAAANSPAPSPAPSAESPTWKWTPTNQPPSSPPTAEPPMTTTS 60

Query: 61  PSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTKAPA 120
           P SPT+SPPATPPELSPVPSS++P  PP ANPP LSPTAPPPAV SPSHAPSPAKTKAPA
Sbjct: 61  PPSPTISPPATPPELSPVPSSYSPTSPPMANPPTLSPTAPPPAVTSPSHAPSPAKTKAPA 120

Query: 121 PAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSV 180
           PAPSK+SP PAKAPKSS+AP SSPPSPNG MEPP PS APA  K+ N  GANRFAIGGS+
Sbjct: 121 PAPSKISPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSEAPAPSKEGNGAGANRFAIGGSI 180

Query: 181 AVGLMIAALIA 191
           A G MIAA IA
Sbjct: 181 AAGFMIAAFIA 191

[Close]

BLAST of ClCG10G009410 vs. ExPASy TrEMBL
Match: A0A0A0L0Q7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G111610 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 4.9e-60
Identity = 152/191 (79.58%), Postives = 165/191 (86.39%), Query Frame = 0


Query: 1   MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPP-TASS 60
           MASST+L++LT+A LLIS AA SP PSPAP+ ESP WKWTP+NEPPSSPPTAEPP T +S
Sbjct: 1   MASSTLLNLLTLAFLLISTAANSPAPSPAPTAESPTWKWTPSNEPPSSPPTAEPPMTTTS 60

Query: 61  PSSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTKAPA 120
           P SPT+SPP TPPELSPVP+S+AP  PP ANPP LSPTAPPPAVKSPSHAPSPAKTKAPA
Sbjct: 61  PPSPTISPPPTPPELSPVPTSYAPTSPPMANPPTLSPTAPPPAVKSPSHAPSPAKTKAPA 120

Query: 121 PAPSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSV 180
           PAPSK SP PAKAPKSS+AP SSPPSPNG MEPP PSVAPA  K+ N  GANRFAIGGS+
Sbjct: 121 PAPSKTSPAPAKAPKSSKAPVSSPPSPNGQMEPPTPSVAPAPSKEGNGAGANRFAIGGSI 180

Query: 181 AVGLMIAALIA 191
           A GLMIAA IA
Sbjct: 181 A-GLMIAAFIA 190

[Close]

BLAST of ClCG10G009410 vs. ExPASy TrEMBL
Match: A0A6J1E3R0 (extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111430527 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 6.0e-50
Identity = 136/190 (71.58%), Postives = 147/190 (77.37%), Query Frame = 0


Query: 1   MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSP 60
           MAS  VL+V+T ALLLISA+A SP+PSPAPSPESP WKWTP+ + PSSPP  EPP     
Sbjct: 1   MASFAVLNVITAALLLISASANSPLPSPAPSPESPPWKWTPDTDSPSSPPEMEPP----- 60

Query: 61  SSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTKAPAP 120
                SP  +PPELSPVPSS  P  PP ANPP LSP A PPAVKSP HAPSP+KTKAPAP
Sbjct: 61  -----SPSVSPPELSPVPSSDTPTSPPDANPPTLSPAALPPAVKSPVHAPSPSKTKAPAP 120

Query: 121 APSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVA 180
           APSKMS  PA+APKSS AP SSPP+PNG MEPP PSVAP APK  N G ANRFAIGG+VA
Sbjct: 121 APSKMSSTPARAPKSSAAPVSSPPAPNGEMEPPTPSVAPTAPKAENGGAANRFAIGGTVA 180

Query: 181 VGLMIAALIA 191
            GLM AALIA
Sbjct: 181 FGLMAAALIA 180

[Close]

BLAST of ClCG10G009410 vs. ExPASy TrEMBL
Match: A0A6J1JCM0 (extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111483194 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.2e-47
Identity = 135/190 (71.05%), Postives = 144/190 (75.79%), Query Frame = 0


Query: 1   MASSTVLHVLTVALLLISAAATSPVPSPAPSPESPAWKWTPNNEPPSSPPTAEPPTASSP 60
           MAS  VL+V+T ALLLISA+A SP+PS APSPES  WKWTP+ E PSSPP  EPP     
Sbjct: 1   MASFAVLNVITAALLLISASANSPLPSTAPSPESQPWKWTPDTESPSSPPEMEPP----- 60

Query: 61  SSPTMSPPATPPELSPVPSSHAPILPPKANPPALSPTAPPPAVKSPSHAPSPAKTKAPAP 120
                SP  +PPELSPVPSS  P  P  ANPP LSP A PPAVKSP HAPSP+KTKAPAP
Sbjct: 61  -----SPSVSPPELSPVPSSDTPTSPSDANPPTLSPAALPPAVKSPVHAPSPSKTKAPAP 120

Query: 121 APSKMSPPPAKAPKSSQAPASSPPSPNGSMEPPAPSVAPAAPKQSNSGGANRFAIGGSVA 180
           APSKMSP PA+APKSS APASSPP+PNG MEPP PSVAP APK  N G ANRFAI  SVA
Sbjct: 121 APSKMSPTPARAPKSSAAPASSPPAPNGEMEPPTPSVAPTAPKADNGGAANRFAISWSVA 180

Query: 181 VGLMIAALIA 191
            GLM AALIA
Sbjct: 181 FGLMAAALIA 180

The following BLAST results are available for this feature:

BLAST of ClCG10G009410 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877309.1	2.2e-67	86.32	vegetative cell wall protein gp1-like [Benincasa hispida]	[more]
XP_008462882.1	2.0e-60	79.06	PREDICTED: classical arabinogalactan protein 4 [Cucumis melo] >KAA0061156.1 clas...	[more]
XP_011654351.1	1.0e-59	79.58	classical arabinogalactan protein 4 [Cucumis sativus]	[more]
KAE8649311.1	2.6e-55	79.55	hypothetical protein Csa_014808 [Cucumis sativus]	[more]
KAG7014869.1	5.0e-51	73.16	hypothetical protein SDJN02_22499, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of ClCG10G009410 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FPQ6	8.1e-04	40.38	Vegetative cell wall protein gp1 OS=Chlamydomonas reinhardtii OX=3055 GN=GP1 PE=...	[more]

BLAST of ClCG10G009410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V3Q7	9.8e-61	79.06	Classical arabinogalactan protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CHW9	9.8e-61	79.06	classical arabinogalactan protein 4 OS=Cucumis melo OX=3656 GN=LOC103501160 PE=4...	[more]
A0A0A0L0Q7	4.9e-60	79.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G111610 PE=4 SV=1	[more]
A0A6J1E3R0	6.0e-50	71.58	extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111430527 PE=4 SV=1	[more]
A0A6J1JCM0	1.2e-47	71.05	extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111483194 PE=4 SV=1	[more]

BLAST of ClCG10G009410 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 12..33 score: 25.45 coord: 59..76 score: 40.0 coord: 80..105 score: 36.92 coord: 39..55 score: 38.82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G009410.1	ClCG10G009410.1	mRNA