ClCG10G005480 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G005480
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Protein of unknown function (DUF3511)
Location	CG_Chr10: 6793106 .. 6793438 (-)
RNA-Seq Expression	ClCG10G005480
Synteny	ClCG10G005480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGGCTCCACCACCATCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAGTTGAGTGAAAACAAAATGTACTTAAATCAATCGCAAAAACGAGCCATTGTCGACCCATCGTTTGTGAAACGACATGTGGCCAAGACGAAGTCGGAATCGTCAAAAAGTTCGACGAAGAAGTCGTGGTGGAAGAAACCAGAAATGAAGAGACGACGGCGCGTTGCAAAGTACAAGTTGTATGCAGTTGAAGGGAAGGTAAAGAGTTCCATAAAAAAAGGGATCAGGTGGTTCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA

mRNA sequence

ATGGAAGGGCTCCACCACCATCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAGTTGAGTGAAAACAAAATGTACTTAAATCAATCGCAAAAACGAGCCATTGTCGACCCATCGTTTGTGAAACGACATGTGGCCAAGACGAAGTCGGAATCGTCAAAAAGTTCGACGAAGAAGTCGTGGTGGAAGAAACCAGAAATGAAGAGACGACGGCGCGTTGCAAAGTACAAGTTGTATGCAGTTGAAGGGAAGGTAAAGAGTTCCATAAAAAAAGGGATCAGGTGGTTCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA

Coding sequence (CDS)

ATGGAAGGGCTCCACCACCATCCAAACAAGGGTGGTCGGAGCCTGGAAGTCATAGACGTGAGAAAGTTGAGTGAAAACAAAATGTACTTAAATCAATCGCAAAAACGAGCCATTGTCGACCCATCGTTTGTGAAACGACATGTGGCCAAGACGAAGTCGGAATCGTCAAAAAGTTCGACGAAGAAGTCGTGGTGGAAGAAACCAGAAATGAAGAGACGACGGCGCGTTGCAAAGTACAAGTTGTATGCAGTTGAAGGGAAGGTAAAGAGTTCCATAAAAAAAGGGATCAGGTGGTTCAAAACCAAGTGTAGCAGAATTATATCTGGGTTTTGA

Protein sequence

MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVAKTKSESSKSSTKKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISGF

Homology

[Close]

BLAST of ClCG10G005480 vs. NCBI nr
Match: KGN56136.1 (hypothetical protein Csa_009524 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 4.2e-42
Identity = 92/110 (83.64%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVAKTKSESSKSST 60
           MEGLHHHPNKGGRSLEVIDVRKLS NK+YLNQSQ+R +VDPSFVK++V KT SE SKS  
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60

Query: 61  KKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISGF 111
           KK WWKKPEM+RR+RVAKYKLY VEGKVK SIKKGIRW KTKCSRIISGF
Sbjct: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

[Close]

BLAST of ClCG10G005480 vs. NCBI nr
Match: KAA0033960.1 (DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 179.9 bits (455), Expect = 1.2e-41
Identity = 92/110 (83.64%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVAKTKSESSKSST 60
           MEGLHHH NKGGRSLEV+DVRKLSENKMYLNQSQ+R +VDPSFVKR+V KT      S  
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKT---WEPSKM 60

Query: 61  KKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISGF 111
           KKSWWKKPEMKRR+RVAKYKLYAVEGKVKSSIKKG RW KTKCSRIISGF
Sbjct: 61  KKSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

[Close]

BLAST of ClCG10G005480 vs. NCBI nr
Match: XP_022151002.1 (uncharacterized protein LOC111019023 [Momordica charantia])

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-34
Identity = 83/111 (74.77%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPS-FVKRHVAKTKSESSKSS 60
           MEG+H  P KGGRSLE+IDVR LSENK+ L+QS+ RA VDPS   KR   K  SESSKSS
Sbjct: 1   MEGIHRRPKKGGRSLEIIDVRNLSENKLSLSQSRSRAAVDPSPSTKRQAIKKPSESSKSS 60

Query: 61  TKKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISGF 111
             KSWWK PEMKRRRRVAKYKLY VEGKVK+SIKKGI+WFKT+CSRI+SGF
Sbjct: 61  V-KSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

[Close]

BLAST of ClCG10G005480 vs. NCBI nr
Match: KAA0032381.1 (hypothetical protein E6C27_scaffold219G002520 [Cucumis melo var. makuwa] >TYJ96369.1 hypothetical protein E5676_scaffold1159G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 151.8 bits (382), Expect = 3.6e-33
Identity = 75/110 (68.18%), Postives = 90/110 (81.82%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVAKTKSESSKSST 60
           ME +H  PNKG R+L++IDVRKLSENKM+LNQS++ + +DPS +K    KT SESSK+ST
Sbjct: 3   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 62

Query: 61  KKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISGF 111
            K WWK  EMKRRRRVAKYKLY VEG+VK SI+KGI WFK +C+RIISGF
Sbjct: 63  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

[Close]

BLAST of ClCG10G005480 vs. NCBI nr
Match: KAG6600771.1 (hypothetical protein SDJN03_06004, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.0 bits (367), Expect = 1.9e-31
Identity = 78/110 (70.91%), Postives = 88/110 (80.00%), Query Frame = 0


Query: 2   EGLHHHP-NKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVAKTKSESSKSST 61
           EG+HHHP N    SLE +D  KLS+N MYLNQ QKR I+  SFVKRH+ KT SESSK ST
Sbjct: 5   EGIHHHPHNSTDWSLEPMDENKLSDNNMYLNQPQKRVIISSSFVKRHIIKT-SESSKRST 64

Query: 62  KKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISGF 111
            +SWWK P++KRRRRVAKY+ Y VEGKVKSSIKKGI+W KTKCSRII GF
Sbjct: 65  -RSWWKNPKIKRRRRVAKYRFYTVEGKVKSSIKKGIKWLKTKCSRIIFGF 112

[Close]

BLAST of ClCG10G005480 vs. ExPASy TrEMBL
Match: A0A0A0L7N5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.0e-42
Identity = 92/110 (83.64%), Postives = 99/110 (90.00%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVAKTKSESSKSST 60
           MEGLHHHPNKGGRSLEVIDVRKLS NK+YLNQSQ+R +VDPSFVK++V KT SE SKS  
Sbjct: 1   MEGLHHHPNKGGRSLEVIDVRKLSVNKVYLNQSQRRTVVDPSFVKQYVTKT-SEPSKSCM 60

Query: 61  KKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISGF 111
           KK WWKKPEM+RR+RVAKYKLY VEGKVK SIKKGIRW KTKCSRIISGF
Sbjct: 61  KKPWWKKPEMRRRQRVAKYKLYGVEGKVKRSIKKGIRWIKTKCSRIISGF 109

[Close]

BLAST of ClCG10G005480 vs. ExPASy TrEMBL
Match: A0A5D3BTT8 (DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00370 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.9e-42
Identity = 92/110 (83.64%), Postives = 97/110 (88.18%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVAKTKSESSKSST 60
           MEGLHHH NKGGRSLEV+DVRKLSENKMYLNQSQ+R +VDPSFVKR+V KT      S  
Sbjct: 1   MEGLHHHQNKGGRSLEVMDVRKLSENKMYLNQSQRRTVVDPSFVKRYVTKT---WEPSKM 60

Query: 61  KKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISGF 111
           KKSWWKKPEMKRR+RVAKYKLYAVEGKVKSSIKKG RW KTKCSRIISGF
Sbjct: 61  KKSWWKKPEMKRRQRVAKYKLYAVEGKVKSSIKKGFRWIKTKCSRIISGF 107

[Close]

BLAST of ClCG10G005480 vs. ExPASy TrEMBL
Match: A0A6J1DCB3 (uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019023 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 5.3e-35
Identity = 83/111 (74.77%), Postives = 92/111 (82.88%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPS-FVKRHVAKTKSESSKSS 60
           MEG+H  P KGGRSLE+IDVR LSENK+ L+QS+ RA VDPS   KR   K  SESSKSS
Sbjct: 1   MEGIHRRPKKGGRSLEIIDVRNLSENKLSLSQSRSRAAVDPSPSTKRQAIKKPSESSKSS 60

Query: 61  TKKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISGF 111
             KSWWK PEMKRRRRVAKYKLY VEGKVK+SIKKGI+WFKT+CSRI+SGF
Sbjct: 61  V-KSWWKNPEMKRRRRVAKYKLYTVEGKVKNSIKKGIKWFKTRCSRIMSGF 110

[Close]

BLAST of ClCG10G005480 vs. ExPASy TrEMBL
Match: A0A5D3BBI7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1159G00320 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.7e-33
Identity = 75/110 (68.18%), Postives = 90/110 (81.82%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVAKTKSESSKSST 60
           ME +H  PNKG R+L++IDVRKLSENKM+LNQS++ + +DPS +K    KT SESSK+ST
Sbjct: 3   MERVHRRPNKGDRNLKIIDVRKLSENKMHLNQSRRHSTIDPSSMKPRAIKTTSESSKAST 62

Query: 61  KKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISGF 111
            K WWK  EMKRRRRVAKYKLY VEG+VK SI+KGI WFK +C+RIISGF
Sbjct: 63  VKLWWKNSEMKRRRRVAKYKLYTVEGRVKESIRKGINWFKCRCTRIISGF 112

[Close]

BLAST of ClCG10G005480 vs. ExPASy TrEMBL
Match: A0A0A0LL30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.0e-30
Identity = 74/110 (67.27%), Postives = 89/110 (80.91%), Query Frame = 0


Query: 1   MEGLHHHPNKGGRSLEVIDVRKLSENKMYLNQSQKRAIVDPSFVKRHVAKTKSESSKSST 60
           MEG+H  PNKG R+L +IDVRKLSENK++LNQS +++ ++PS VK    KT SESSK+S 
Sbjct: 39  MEGVHRRPNKGDRNLRIIDVRKLSENKIHLNQSGRQSTMNPSSVKPRGMKTASESSKTSG 98

Query: 61  KKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISGF 111
            KSW KK E+KRRRRVAKYKLY VEGKVK SI+KGI WFK K +RI+SGF
Sbjct: 99  GKSWGKKLEVKRRRRVAKYKLYTVEGKVKDSIRKGINWFKCKYTRIMSGF 148

[Close]

BLAST of ClCG10G005480 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 67.4 bits (163), Expect = 8.2e-12
Identity = 31/60 (51.67%), Postives = 44/60 (73.33%), Query Frame = 0


Query: 50  KTKSESSKSSTKKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISG 109
           + +  SS S+  K WW  PE+KR+RRVAKYKLY+ EGK+K +++K  +W K +CS+II G
Sbjct: 64  RPRRSSSHSTLFKGWWNDPEIKRKRRVAKYKLYSAEGKMKITLRKSYKWIKIQCSKIIHG 123

[Close]

BLAST of ClCG10G005480 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 55.8 bits (133), Expect = 2.5e-08
Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 0


Query: 48  VAKTKSESSKSSTKKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRII 107
           VA  +S +S SS +       EMKR++R+A+YK Y VEGKVKS++K G RW K KC +I+
Sbjct: 49  VAAGRSNAS-SSLRIGGLSDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIV 108

Query: 108 SGF 111
             F
Sbjct: 109 HRF 110

[Close]

BLAST of ClCG10G005480 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 52.4 bits (124), Expect = 2.7e-07
Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 55  SSKSSTKKSWWK--KPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIISG 110
           +SK+ T  + W+    E KR++R+A YK YA+EGKVKS++KKG  W K + S II G
Sbjct: 54  TSKTRTTATPWRLIDAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHIIHG 110

[Close]

BLAST of ClCG10G005480 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 49.3 bits (116), Expect = 2.3e-06
Identity = 21/56 (37.50%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 54  ESSKSSTKKSW-WKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCSRIIS 109
           +  +SS+  SW +  P+++R++RV  Y+ Y VEGK+K S +K  +W K KC+++++
Sbjct: 61  KKGRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKSFKWIKDKCNKLLN 116

[Close]

BLAST of ClCG10G005480 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 48.5 bits (114), Expect = 3.9e-06
Identity = 24/66 (36.36%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 45  KRHVAKTKSESSKSSTKKSWWKKPEMKRRRRVAKYKLYAVEGKVKSSIKKGIRWFKTKCS 104
           + ++   K E S + +K      PE++R++RVA YK+Y VEGKVK S +   RW K + +
Sbjct: 39  ENNIYDVKKEKSIARSKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYT 98

Query: 105 RIISGF 111
           +++ G+
Sbjct: 99  QVVYGW 104

The following BLAST results are available for this feature:

BLAST of ClCG10G005480 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN56136.1	4.2e-42	83.64	hypothetical protein Csa_009524 [Cucumis sativus]	[more]
KAA0033960.1	1.2e-41	83.64	DUF3511 domain protein [Cucumis melo var. makuwa] >TYK02584.1 DUF3511 domain pro...	[more]
XP_022151002.1	1.1e-34	74.77	uncharacterized protein LOC111019023 [Momordica charantia]	[more]
KAA0032381.1	3.6e-33	68.18	hypothetical protein E6C27_scaffold219G002520 [Cucumis melo var. makuwa] >TYJ963...	[more]
KAG6600771.1	1.9e-31	70.91	hypothetical protein SDJN03_06004, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of ClCG10G005480 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of ClCG10G005480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7N5	2.0e-42	83.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G077700 PE=4 SV=1	[more]
A0A5D3BTT8	5.9e-42	83.64	DUF3511 domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9...	[more]
A0A6J1DCB3	5.3e-35	74.77	uncharacterized protein LOC111019023 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A5D3BBI7	1.7e-33	68.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LL30	4.0e-30	67.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G123580 PE=4 SV=1	[more]

BLAST of ClCG10G005480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05725.1	8.2e-12	51.67	Protein of unknown function (DUF3511)	[more]
AT2G47480.1	2.5e-08	49.21	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	2.7e-07	49.12	Protein of unknown function (DUF3511)	[more]
AT2G19460.1	2.3e-06	37.50	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	3.9e-06	36.36	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 65..109 e-value: 2.1E-23 score: 81.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 49..69
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 9..110
None	No IPR available	PANTHER	PTHR33193:SF13	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 9..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G005480.1	ClCG10G005480.1	mRNA