ClCG10G005380 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G005380
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	protein translation factor SUI1 homolog
Location	CG_Chr10: 6673912 .. 6676943 (-)
RNA-Seq Expression	ClCG10G005380
Synteny	ClCG10G005380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCCTCTCACAACTTCAACATAGGTTCCTGAAGATTTTTGCCAGAGAACATTTTTTTTTTTTTTTACTGGTGAATTGGACAAACCGACTACATCTTCACAACCCCTATTTGTATCCCTCGGCAGCCCAACCGTGCTTTCTTACTAATAGACAACTTCTCCCACTAAACTTGCCAAACTTCTTCTTAATTTGCCACCTAAGCACACATTAAAATATTAAGAAAATAATCAATTAAAAACTTAAAGAATTAAATACCTCAACTCTCGACTACTGCCTTTTCAACGCCTAGACTTCTCTTCTAGCCCACTTCTTTCCTCACTCGAGTTCAACGCCTAGCTCAAGCCCTATTGCCACCAAATTCGTCTAAGTCAACTATTACTAACTTATAATTCAAATAACAATGAGAAAAAGTTGAGGGCTTACAATATTTCTCCTAAAAAAATGAAAAATTGCCTTTTTAGTCCCCAAATTTTGAATAATATGTGCCTTTGGTCCCTAAGTTTTAAAAATGTACCTTTTTAGTCCCCAAGTTTTGAACAATATGTGTGTTTAGTTCCTGAGTTTTAAAAATGTACCTTTTTAGCCCCCAAGTTTATAAGAATGGATCCATTTGGTTCCTAAGTTTTCAAAATATACATTTCAGTTCCTAAGTTTTTAAAAATAGATTTAAAAGGTCCTTCAATTTTTTTAAAAATAATTATATGATATTTAAAATTAGAAAAAAAAAAGTTTTAAATAGGAGATGGTTTTTAAAAATTATTCTTCTACTTTAATGGCATATAATTATTTAAAATAATAATAAAAAATTATTTGATGGACTTTTTAATCCTATTTTTAAAAACTTAGGGACTGAAAAGTTACATTTTGAAAATATAGAGACTAAATAGGTTTATTCTTATAAACTTGAGGACTAAAAGGATACATTTTTTAAATTTAGGAATCAAACGCACATATTATTTAAAACTTGGGATTAAAAAGGTACAGTTTTTTAAACTCAAAGACCAAATACACGTATTATCAAAACGTGTAGACTAAAAAAATAATTTTTCTTTAAAGAAAAAAAAAACATACAACGTACAAGCAATCCTTTTCATTTTAAAAAATTCCCATAAGCGTCGTGTGTGGATTGGAGTGTTCGGTGCGTTCATTGTACGCGTCCCTTATGATGAATAAGGATTCCCTTTTCCACATCGAGAATATGTTATCCAGATAACCATACACCTCCAAATCATCGTGGCCGTATATCCTTCCCAACAAAACTCCATCCACACCGTCCATTCTCACAAACACCCACCTCTATATAAACTCTCCTCAGCCTTCTCATTCTTCTCAAGCTTTCTATATTCGCATTCTGCTTCGACTTCAGCTTCAGGTACAATTCTCCTCTTCTTCTTCCTTTTCAATTTTTCAATCTATTACTCTCTTTCTGGTTTCTGTATTATGTGATTGTTTGTTTTTTCTGTTCAGTCTTGAATTTTGATCTTCGTAATTGATCACTGTTTGTTCGCTGAGGAGTCTACTTCTTGCTGTTTTCCCTGAGTTTGTTTGTTTGTTGAGGAGTCTACTTCTGTATTATGTGATGCTTTTGAATGTGGGAATTCATCTCGATCACAAATTTTACTGATATCTAAAGTATTCTAATCTTATGAGAAACATCCTTTTGGGTTAAATCTTATTTTTCGTCTTTGGTCTATGAACTTTCAACTTGTCTGTTCTTTCGACCATTCTTTTTAATCTCTTGGTTTCGTTAAAGTATTGGTTATAGTTAAATTTACCATGTTTATGTTATATGAATAATATCCAATAATATCATAACTTTTAAAATGGAATGAAAGCTTTATGAGAGAAGAACGAAGACTGTTGATGGAAAGGCTAAGTTTTAATTTGGAGAAGAGACATATTTATAAACTAATTCATTGTTGTGTTTCTTCCTTAAGTTGGTTAATAATTGAAAAGATGCACTCATGGAATTGAAAAGATGCAACCCTAAAGGAAGATTCATATACCATTTATTCCAACCGTTTAAGCTTTTGGGTGGATGAGATCATGTGTTTCAAACCTCTATAGTTGGAATTTCATTTCCTCACAATTAATACTGATTTGATTTCTACTTATTGGCCTTCTACAAATTTTCAAGACCAAAGATATAAGCCCATCAAGCTTTTAGTGATTTAACAAATCTTTCCTTCATCGTTTCTAAATTGATTTGGAAATTTGATAGCTAACTGATGACAAGTGGTCTCTAATATTTATCTTCTTATACATTTTTTGATCAGCTAAGTAAATAAAAAATGCGTTAGTGTCAAGTTTCTACTGTATAATTTCCTGAAAAATTAAGAGTAAGGACTGGTTTTATTTTTAAAATTTGGGGATTAAAATAGAATTATTGAAAGCTTAGGCATCCAAATTGAATAAGCATGAAGTCTGGGATTAGAATACAATACGAACCAATATTTTATCTTGAATTACTGGTTCACCCGTTTCCATCAAGAAAACTACATTGCATGGTTTCCCACATTCTTTTTGACTTATCAGTTTTAAAATATATTTTCTCTATCAACCAAAGTATCTGCTGATGACCAATCTTGCTGGTTAAACTTTCAAAGGTGAATGTTAAATAATTTTTTTCTTTATGTGGGTGTTGGAAACAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA

mRNA sequence

ATGGCAGCCCTCTCACAACTTCAACATAGCCTTCTCATTCTTCTCAAGCTTTCTATATTCGCATTCTGCTTCGACTTCAGCTTCAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA

Coding sequence (CDS)

ATGGCAGCCCTCTCACAACTTCAACATAGCCTTCTCATTCTTCTCAAGCTTTCTATATTCGCATTCTGCTTCGACTTCAGCTTCAGCTTCTTGGGTGCCTTCAGATACCACCAAGCAAATTACATGGTTGATCTAGATATCCAGATTCCAAGCGCTTTCGATCCCTTTGCTGACGCCAAAGACTCGGATGCCCCCGGAACCAAAGAATACGTCCATATAAGGGTCCAACAGAGGAATGGAAAGAAGTGTCTAACGACAGTTCAAGGGCTTAAGAAAGAGTTCAGCTATGATAAGATCCTTAAGGACCTGAAGAAGGACTTCTGTTGCAACGGGAATGTTGTTCAGGATAAAGAGCTGGGGAAGATAATCCAACTTCAAGGCGATCAGCGCAAGAACGTCTCTCAGTTCCTTGTTCAGGCTGGCCTCGTCAAGAAGGATCAAATCAAGATACATGGTTTTTGA

Protein sequence

MAALSQLQHSLLILLKLSIFAFCFDFSFSFLGAFRYHQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF

Homology

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BLAST of ClCG10G005380 vs. NCBI nr
Match: XP_016903023.1 (PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo] >XP_031739416.1 protein translation factor SUI1 homolog 2 [Cucumis sativus] >KAA0033974.1 SUI1 domain-containing protein [Cucumis melo var. makuwa] >KGN56126.1 hypothetical protein Csa_011317 [Cucumis sativus] >TYK02572.1 SUI1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 228.8 bits (582), Expect = 3.2e-56
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MVDLD+QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of ClCG10G005380 vs. NCBI nr
Match: XP_038903171.1 (protein translation factor SUI1 homolog 2-like [Benincasa hispida])

HSP 1 Score: 227.6 bits (579), Expect = 7.1e-56
Identity = 110/112 (98.21%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MVDLD+QIP+AFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPTAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of ClCG10G005380 vs. NCBI nr
Match: KAA0025154.1 (SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 225.3 bits (573), Expect = 3.5e-55
Identity = 108/116 (93.10%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 38  QANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYD 97
           Q+ +MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+
Sbjct: 35  QSRFMVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYE 94

Query: 98  KILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KILKD+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 95  KILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

[Close]

BLAST of ClCG10G005380 vs. NCBI nr
Match: PON51499.1 (Eukaryotic translation initiation factor SUI [Parasponia andersonii])

HSP 1 Score: 221.9 bits (564), Expect = 3.9e-54
Identity = 107/128 (83.59%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 27  SFSFLGAFRY-HQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLT 86
           +F+F+ +F++  QA YMV+LD+Q+PSAFDPFA+AKDSDAPG KEYVHIRVQQRNGKKCLT
Sbjct: 19  NFAFVASFQFSKQAKYMVELDVQLPSAFDPFAEAKDSDAPGAKEYVHIRVQQRNGKKCLT 78

Query: 87  TVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKK 146
           TVQGLK+E+SY+KILKDLKK FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQAGLVKK
Sbjct: 79  TVQGLKQEYSYEKILKDLKKVFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQAGLVKK 138

Query: 147 DQIKIHGF 154
           D IKIHGF
Sbjct: 139 DHIKIHGF 146

[Close]

BLAST of ClCG10G005380 vs. NCBI nr
Match: XP_004139787.1 (protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PREDICTED: protein translation factor SUI1 homolog 1-like [Cucumis melo] >XP_038899382.1 protein translation factor SUI1 homolog 1-like [Benincasa hispida] >KGN44162.1 hypothetical protein Csa_015864 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 3.9e-54
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+KILK
Sbjct: 1   MVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYEKILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           D+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

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BLAST of ClCG10G005380 vs. ExPASy Swiss-Prot
Match: Q94JV4 (Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1g54290 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.1e-46
Identity = 91/113 (80.53%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 101
           M DL++Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 102 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

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BLAST of ClCG10G005380 vs. ExPASy Swiss-Prot
Match: P41568 (Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4g27130 PE=1 SV=2)

HSP 1 Score: 185.3 bits (469), Expect = 5.3e-46
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 101
           M +LD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 102 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of ClCG10G005380 vs. ExPASy Swiss-Prot
Match: O82569 (Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa OX=45043 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 6.9e-46
Identity = 90/113 (79.65%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPG-TKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 101
           MVD DIQIP++FDPFA+A+ +DA G TKEYVHIR+QQRNG+K LTTVQGLKKE SYDKIL
Sbjct: 1   MVDSDIQIPTSFDPFAEAEITDATGSTKEYVHIRIQQRNGRKSLTTVQGLKKELSYDKIL 60

Query: 102 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KDLKK  CCNG VV DKELGK+IQLQGDQRKNVS F+VQAG+VKKDQIK+H F
Sbjct: 61  KDLKKALCCNGTVVNDKELGKVIQLQGDQRKNVSTFIVQAGIVKKDQIKVHNF 113

[Close]

BLAST of ClCG10G005380 vs. ExPASy Swiss-Prot
Match: A6MZM2 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=GOS2 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 9.0e-46
Identity = 89/115 (77.39%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDK 101
           M DLDIQIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY+K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 102 ILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           ILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of ClCG10G005380 vs. ExPASy Swiss-Prot
Match: Q0D5W6 (Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=GOS2 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 9.0e-46
Identity = 89/115 (77.39%), Postives = 102/115 (88.70%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSD---APGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDK 101
           M DLDIQIP+AFDPFA+A   D   A G+K+YVH+R+QQRNG+K LTTVQGLKKEFSY+K
Sbjct: 1   MSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNK 60

Query: 102 ILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           ILKDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAG+VKK+ IKIHGF
Sbjct: 61  ILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115

[Close]

BLAST of ClCG10G005380 vs. ExPASy TrEMBL
Match: A0A5D3BUS5 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold925G00240 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.5e-56
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MVDLD+QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of ClCG10G005380 vs. ExPASy TrEMBL
Match: A0A0A0L7M8 (SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G077610 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.5e-56
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MVDLD+QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of ClCG10G005380 vs. ExPASy TrEMBL
Match: A0A1S4E468 (protein translation factor SUI1 homolog 2 OS=Cucumis melo OX=3656 GN=LOC103501585 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.5e-56
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MVDLD+QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK
Sbjct: 1   MVDLDVQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 112

[Close]

BLAST of ClCG10G005380 vs. ExPASy TrEMBL
Match: A0A5D3DHR8 (SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001030 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55
Identity = 108/116 (93.10%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 38  QANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYD 97
           Q+ +MV+LD QIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSY+
Sbjct: 35  QSRFMVELDFQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYE 94

Query: 98  KILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KILKD+KK+FCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF
Sbjct: 95  KILKDVKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 150

[Close]

BLAST of ClCG10G005380 vs. ExPASy TrEMBL
Match: A0A2P5BRS0 (Eukaryotic translation initiation factor SUI OS=Parasponia andersonii OX=3476 GN=PanWU01x14_215810 PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.9e-54
Identity = 107/128 (83.59%), Postives = 120/128 (93.75%), Query Frame = 0


Query: 27  SFSFLGAFRY-HQANYMVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLT 86
           +F+F+ +F++  QA YMV+LD+Q+PSAFDPFA+AKDSDAPG KEYVHIRVQQRNGKKCLT
Sbjct: 19  NFAFVASFQFSKQAKYMVELDVQLPSAFDPFAEAKDSDAPGAKEYVHIRVQQRNGKKCLT 78

Query: 87  TVQGLKKEFSYDKILKDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKK 146
           TVQGLK+E+SY+KILKDLKK FCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQAGLVKK
Sbjct: 79  TVQGLKQEYSYEKILKDLKKVFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQAGLVKK 138

Query: 147 DQIKIHGF 154
           D IKIHGF
Sbjct: 139 DHIKIHGF 146

[Close]

BLAST of ClCG10G005380 vs. TAIR 10
Match: AT5G54940.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 204.9 bits (520), Expect = 4.6e-53
Identity = 97/112 (86.61%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MV+LDIQIPSA+DPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SY++ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of ClCG10G005380 vs. TAIR 10
Match: AT5G54940.2 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 204.9 bits (520), Expect = 4.6e-53
Identity = 97/112 (86.61%), Postives = 106/112 (94.64%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDAPGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKILK 101
           MV+LDIQIPSA+DPFA+AKDSDAPG KE +HIR+QQRNGKK LTTVQGLKKE+SY++ILK
Sbjct: 1   MVELDIQIPSAYDPFAEAKDSDAPGAKENIHIRIQQRNGKKSLTTVQGLKKEYSYERILK 60

Query: 102 DLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           DLKKDFCCNGNVVQDKELGKIIQLQGDQRK VSQFLVQ G+ KKDQIKIHGF
Sbjct: 61  DLKKDFCCNGNVVQDKELGKIIQLQGDQRKKVSQFLVQTGIAKKDQIKIHGF 112

[Close]

BLAST of ClCG10G005380 vs. TAIR 10
Match: AT1G54290.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 187.6 bits (475), Expect = 7.6e-48
Identity = 91/113 (80.53%), Postives = 101/113 (89.38%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 101
           M DL++Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSDLEVQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYSKIL 60

Query: 102 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of ClCG10G005380 vs. TAIR 10
Match: AT4G27130.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 185.3 bits (469), Expect = 3.8e-47
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 101
           M +LD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 102 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

[Close]

BLAST of ClCG10G005380 vs. TAIR 10
Match: AT5G54760.1 (Translation initiation factor SUI1 family protein )

HSP 1 Score: 184.9 bits (468), Expect = 4.9e-47
Identity = 91/113 (80.53%), Postives = 100/113 (88.50%), Query Frame = 0


Query: 42  MVDLDIQIPSAFDPFADAKDSDA-PGTKEYVHIRVQQRNGKKCLTTVQGLKKEFSYDKIL 101
           M +LD Q+P+AFDPFADA   D+  GTKEYVHIRVQQRNG+K LTTVQGLKKE+SY KIL
Sbjct: 1   MSELDSQVPTAFDPFADANVEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKIL 60

Query: 102 KDLKKDFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQAGLVKKDQIKIHGF 154
           KDLKK+FCCNG VVQD ELG++IQLQGDQRKNVS FLVQAGLVKKD IKIHGF
Sbjct: 61  KDLKKEFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113

The following BLAST results are available for this feature:

BLAST of ClCG10G005380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903023.1	3.2e-56	99.11	PREDICTED: protein translation factor SUI1 homolog 2 [Cucumis melo] >XP_03173941...	[more]
XP_038903171.1	7.1e-56	98.21	protein translation factor SUI1 homolog 2-like [Benincasa hispida]	[more]
KAA0025154.1	3.5e-55	93.10	SUI1 domain-containing protein [Cucumis melo var. makuwa] >TYK23112.1 SUI1 domai...	[more]
PON51499.1	3.9e-54	83.59	Eukaryotic translation initiation factor SUI [Parasponia andersonii]	[more]
XP_004139787.1	3.9e-54	95.54	protein translation factor SUI1 homolog 1 [Cucumis sativus] >XP_008447738.1 PRED...	[more]

BLAST of ClCG10G005380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JV4	1.1e-46	80.53	Protein translation factor SUI1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At1...	[more]
P41568	5.3e-46	80.53	Protein translation factor SUI1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At4...	[more]
O82569	6.9e-46	79.65	Protein translation factor SUI1 homolog OS=Pimpinella brachycarpa OX=45043 PE=3 ...	[more]
A6MZM2	9.0e-46	77.39	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. indica OX=39946 G...	[more]
Q0D5W6	9.0e-46	77.39	Protein translation factor SUI1 homolog OS=Oryza sativa subsp. japonica OX=39947...	[more]

BLAST of ClCG10G005380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BUS5	1.5e-56	99.11	SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A0A0L7M8	1.5e-56	99.11	SUI1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G077610 PE=3 S...	[more]
A0A1S4E468	1.5e-56	99.11	protein translation factor SUI1 homolog 2 OS=Cucumis melo OX=3656 GN=LOC10350158...	[more]
A0A5D3DHR8	1.7e-55	93.10	SUI1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A2P5BRS0	1.9e-54	83.59	Eukaryotic translation initiation factor SUI OS=Parasponia andersonii OX=3476 GN...	[more]

BLAST of ClCG10G005380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54940.1	4.6e-53	86.61	Translation initiation factor SUI1 family protein	[more]
AT5G54940.2	4.6e-53	86.61	Translation initiation factor SUI1 family protein	[more]
AT1G54290.1	7.6e-48	80.53	Translation initiation factor SUI1 family protein	[more]
AT4G27130.1	3.8e-47	80.53	Translation initiation factor SUI1 family protein	[more]
AT5G54760.1	4.9e-47	80.53	Translation initiation factor SUI1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005874	Eukaryotic translation initiation factor SUI1	TIGRFAM	TIGR01160	TIGR01160	coord: 46..153 e-value: 8.5E-53 score: 175.6
IPR005874	Eukaryotic translation initiation factor SUI1	CDD	cd11566	eIF1_SUI1	coord: 69..152 e-value: 3.26102E-50 score: 153.845
None	No IPR available	GENE3D	3.30.780.10		coord: 32..153 e-value: 1.6E-46 score: 159.7
None	No IPR available	PANTHER	PTHR10388:SF56	BNAA10G09260D PROTEIN	coord: 42..153
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 42..153
IPR001950	SUI1 domain	PFAM	PF01253	SUI1	coord: 68..142 e-value: 2.5E-24 score: 85.5
IPR001950	SUI1 domain	PROSITE	PS50296	SUI1	coord: 71..141 score: 23.002235
IPR036877	SUI1 domain superfamily	SUPERFAMILY	55159	eIF1-like	coord: 40..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G005380.2	ClCG10G005380.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006413	translational initiation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003743	translation initiation factor activity