ClCG10G004425 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAGGCCAGTTGGGATTCGGCTGGAACGAAGAGTTTAAATGTGTCCAGGTCAAGAGGGAGATTTTCGATCTTTGGGTTCGAGTAAGATTTTAAAAAACAAAATCTACCTTTACGTGTTAATTATGTAAATATTAATAATGTGTACGTGTGTAAATGTAGAGTCATCACAGTGCAAAGAGGATGTGGAACAAGTCATTCCCCCATTACGATGACCTCTCCACCGTCTTTGAGAAAGATAGAGTTGTAGGACAATCAAGTGAGGACCCACACGTGATGGCGAGCAATGCATTTAAAGAGTTTGAAGATGAGATTCGACTTGGAACACAGTACTGTCAGACACCTGAGGTTCGCCAAACAGATTCACCATTAAATCCGGATGGAATGGATGAAGAGACAGTGGAGCAATCTACAAGTAGAGCGACACCTGCCGAGTCATCTCGAGGAAGCAAGAGGAAGAGGCCATCATTCCAACCTGAAATGATCGATATCATGAGATCGACTGTTGAGATGTAG ATGTTAGGCCAGTTGGGATTCGGCTGGAACGAAGAGTTTAAATGTGTCCAGGTCAAGAGGGAGATTTTCGATCTTTGGGTTCGAAGTCATCACAGTGCAAAGAGGATGTGGAACAAGTCATTCCCCCATTACGATGACCTCTCCACCGTCTTTGAGAAAGATAGAGTTGTAGGACAATCAAGTGAGGACCCACACGTGATGGCGAGCAATGCATTTAAAGAGTTTGAAGATGAGATTCGACTTGGAACACAGTACTGTCAGACACCTGAGGTTCGCCAAACAGATTCACCATTAAATCCGGATGGAATGGATGAAGAGACAGTGGAGCAATCTACAAGTAGAGCGACACCTGCCGAGTCATCTCGAGGAAGCAAGAGGAAGAGGCCATCATTCCAACCTGAAATGATCGATATCATGAGATCGACTGTTGAGATGTAG ATGTTAGGCCAGTTGGGATTCGGCTGGAACGAAGAGTTTAAATGTGTCCAGGTCAAGAGGGAGATTTTCGATCTTTGGGTTCGAAGTCATCACAGTGCAAAGAGGATGTGGAACAAGTCATTCCCCCATTACGATGACCTCTCCACCGTCTTTGAGAAAGATAGAGTTGTAGGACAATCAAGTGAGGACCCACACGTGATGGCGAGCAATGCATTTAAAGAGTTTGAAGATGAGATTCGACTTGGAACACAGTACTGTCAGACACCTGAGGTTCGCCAAACAGATTCACCATTAAATCCGGATGGAATGGATGAAGAGACAGTGGAGCAATCTACAAGTAGAGCGACACCTGCCGAGTCATCTCGAGGAAGCAAGAGGAAGAGGCCATCATTCCAACCTGAAATGATCGATATCATGAGATCGACTGTTGAGATGTAG MLGQLGFGWNEEFKCVQVKREIFDLWVRSHHSAKRMWNKSFPHYDDLSTVFEKDRVVGQSSEDPHVMASNAFKEFEDEIRLGTQYCQTPEVRQTDSPLNPDGMDEETVEQSTSRATPAESSRGSKRKRPSFQPEMIDIMRSTVEM Homology
BLAST of ClCG10G004425 vs. NCBI nr
Match: XP_038899910.1 (uncharacterized protein LOC120087100 [Benincasa hispida]) HSP 1 Score: 221.1 bits (562), Expect = 6.3e-54 Identity = 113/146 (77.40%), Postives = 126/146 (86.30%), Query Frame = 0
BLAST of ClCG10G004425 vs. NCBI nr
Match: XP_038902479.1 (uncharacterized protein At2g29880-like [Benincasa hispida]) HSP 1 Score: 215.7 bits (548), Expect = 2.6e-52 Identity = 106/132 (80.30%), Postives = 117/132 (88.64%), Query Frame = 0
BLAST of ClCG10G004425 vs. NCBI nr
Match: XP_038904322.1 (uncharacterized protein LOC120090676 [Benincasa hispida]) HSP 1 Score: 204.5 bits (519), Expect = 6.1e-49 Identity = 103/130 (79.23%), Postives = 111/130 (85.38%), Query Frame = 0
BLAST of ClCG10G004425 vs. NCBI nr
Match: XP_038892629.1 (uncharacterized protein At2g29880-like [Benincasa hispida]) HSP 1 Score: 183.7 bits (465), Expect = 1.1e-42 Identity = 97/144 (67.36%), Postives = 106/144 (73.61%), Query Frame = 0
BLAST of ClCG10G004425 vs. NCBI nr
Match: XP_038875070.1 (uncharacterized protein LOC120067596 [Benincasa hispida]) HSP 1 Score: 177.2 bits (448), Expect = 1.0e-40 Identity = 83/109 (76.15%), Postives = 93/109 (85.32%), Query Frame = 0
BLAST of ClCG10G004425 vs. ExPASy TrEMBL
Match: A0A6J1DW73 (uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025018 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 7.1e-19 Identity = 54/140 (38.57%), Postives = 83/140 (59.29%), Query Frame = 0
BLAST of ClCG10G004425 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.7e-18 Identity = 58/140 (41.43%), Postives = 83/140 (59.29%), Query Frame = 0
BLAST of ClCG10G004425 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.7e-18 Identity = 58/140 (41.43%), Postives = 83/140 (59.29%), Query Frame = 0
BLAST of ClCG10G004425 vs. ExPASy TrEMBL
Match: A0A5D3C1M0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1317G00570 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 2.8e-15 Identity = 54/140 (38.57%), Postives = 79/140 (56.43%), Query Frame = 0
BLAST of ClCG10G004425 vs. ExPASy TrEMBL
Match: A0A5D3DG22 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold523G00290 PE=3 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 8.1e-15 Identity = 45/99 (45.45%), Postives = 61/99 (61.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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