ClCG10G001440 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG10G001440
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUDP-N-acetylglucosamine transferase subunit ALG14
LocationCG_Chr10: 1497621 .. 1498759 (+)
RNA-Seq ExpressionClCG10G001440
SyntenyClCG10G001440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCAAGGGGTTGATATGTCACTGTGCTAATGGAGCATCGAGGTGTTGGGTAAAAATGTCAAGGGTCGATGTGATGAGCTATGGAAGCAAGTAGTGAAGAACCTAGGGAAGGACTAATATGTTGCTAAGTCATTGGTGCACCTTGGGTAATAATGGTCAAGGTGCAATGCGCAGTTCGAGGCTTTAGGTAAAAATGGTCAAGTGTTAACATTGAATTGGGTAGAAACTGTTCTTATCCAAAAAAATTGTGTAGAAAGTGTTGAGGCCCTGGGTTAAAATAGATAGAGGTCGATGCAACTTGAAGTTTGGTGGGGTTACATAAAACTCTGAATTCTAATATTGATTATGTGAGTTTTTATTTCAATTATAGTATAGGAGAAAATCAAGGCAGTATAACCTCTTCTAATCTCTATTCTACTTTATTGAGTTTCTTCTTTCTCTCGCTTTCTGGCAGGAATTGTGCTTTTGCTTCCCTTGATGGATTCTAGTGTTACTATCGCGACTGTAATTCTCAGTATCAGCTTGATTTTGAGCCGTGTTCTTTACGTTATATATTGGAGTGGTAGACCACTTCGAAACAAAAGCTTGGGACCTGTTAGTACCCTCATTGTTTTAGGCTCAGGTCAGATAGCCATCAATTTCATTGACTTGTAGATTTAATCATGTAATTGCCCTGATTGTTGGATATGTAGGAGGTCACACGGCGGAGATGCTCAATGTGTTGTCTGTGCTGCAGAAAGACTTGTTTTCTCCAAGATTCTACATTGCTGCTGCTACTGATAACATGAGTCTTCAAAAAGCTCGTACGTATGAGAACCAACTGGCTGATAAGGTACGCTTTCAAGGTCTTCCAACTTCTCTTGTCTGAGTGAGGAAAGGTGAGGGGATGGCATGAGCAGGGTGTTTCAGTTGCCAATCTTATGACAAACTAGAAGCTCTATTGGGTAGGACAGTGGGGATATTAGTCTACGTGTTGCTTTGGGTTGTGGAACTTGAACTGAGGCTGGGTTCCCTAAAATGAAGATGATCCTTAAAATTTTAGCAAAGTGATAGAAATGTAAAGCTGGTGACTGTGGCCCCTTGGTGGAGCCAAAATTATTTATAAGGACGGGAATAATCTTAGATACCCTCGGGTAA

mRNA sequence

ATGGTCAAGGGGTTGATATGTCACTGTGCTAATGGAGCATCGAGGTGTTGGGTAAAAATGTCAAGGGTCGATGTGATGAGCTATGGAAGCAAGTGCAATGCGCAGTTCGAGGCTTTAGGTAAAAATGGTCAAGTGTTAACATTGAATTGGGTAGAAACTGTTCTTATCCAAAAAAATTGTGTAGAAAGTGTTGAGGCCCTGGGAATTGTGCTTTTGCTTCCCTTGATGGATTCTAGTGTTACTATCGCGACTGTAATTCTCAGTATCAGCTTGATTTTGAGCCGTGTTCTTTACGTTATATATTGGAGTGGTAGACCACTTCGAAACAAAAGCTTGGGACCTGTTAGAGGTCACACGGCGGAGATGCTCAATGTGTTGTCTGTGCTGCAGAAAGACTTGTTTTCTCCAAGATTCTACATTGCTGCTGCTACTGATAACATGAGTCTTCAAAAAGCTCGTACGTATGAGAACCAACTGGCTGATAAGGTACGCTTTCAAGCAGGGTGTTTCAGTTGCCAATCTTATGACAAACTAGAAGCTCTATTGGGTAGGACAGTGGGGATATTAGTCTACGTGTTGCTTTGGGTTGTGGAACTTGAACTGAGGCTGGCTGGTGACTGTGGCCCCTTGGTGGAGCCAAAATTATTTATAAGGACGGGAATAATCTTAGATACCCTCGGGTAA

Coding sequence (CDS)

ATGGTCAAGGGGTTGATATGTCACTGTGCTAATGGAGCATCGAGGTGTTGGGTAAAAATGTCAAGGGTCGATGTGATGAGCTATGGAAGCAAGTGCAATGCGCAGTTCGAGGCTTTAGGTAAAAATGGTCAAGTGTTAACATTGAATTGGGTAGAAACTGTTCTTATCCAAAAAAATTGTGTAGAAAGTGTTGAGGCCCTGGGAATTGTGCTTTTGCTTCCCTTGATGGATTCTAGTGTTACTATCGCGACTGTAATTCTCAGTATCAGCTTGATTTTGAGCCGTGTTCTTTACGTTATATATTGGAGTGGTAGACCACTTCGAAACAAAAGCTTGGGACCTGTTAGAGGTCACACGGCGGAGATGCTCAATGTGTTGTCTGTGCTGCAGAAAGACTTGTTTTCTCCAAGATTCTACATTGCTGCTGCTACTGATAACATGAGTCTTCAAAAAGCTCGTACGTATGAGAACCAACTGGCTGATAAGGTACGCTTTCAAGCAGGGTGTTTCAGTTGCCAATCTTATGACAAACTAGAAGCTCTATTGGGTAGGACAGTGGGGATATTAGTCTACGTGTTGCTTTGGGTTGTGGAACTTGAACTGAGGCTGGCTGGTGACTGTGGCCCCTTGGTGGAGCCAAAATTATTTATAAGGACGGGAATAATCTTAGATACCCTCGGGTAA

Protein sequence

MVKGLICHCANGASRCWVKMSRVDVMSYGSKCNAQFEALGKNGQVLTLNWVETVLIQKNCVESVEALGIVLLLPLMDSSVTIATVILSISLILSRVLYVIYWSGRPLRNKSLGPVRGHTAEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQLADKVRFQAGCFSCQSYDKLEALLGRTVGILVYVLLWVVELELRLAGDCGPLVEPKLFIRTGIILDTLG
Homology
[Close]
BLAST of ClCG10G001440 vs. NCBI nr
Match: TYK11484.1 (UDP-N-acetylglucosamine transferase subunit ALG14 [Cucumis melo var. makuwa])

HSP 1 Score: 162.5 bits (410), Expect = 4.2e-36
Identity = 90/104 (86.54%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 67  LGIVLLLPLMDSSVTIATVILSISLILSRVLYVIYWSGRPLRNKSLGPVR--------GH 126
           +G V LL LMDSSVTIATVILSISLILSR+LYVIYWSGRPLRNKSLGPV         GH
Sbjct: 11  IGFVRLLLLMDSSVTIATVILSISLILSRILYVIYWSGRPLRNKSLGPVSTLIVLGSGGH 70

Query: 127 TAEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 163
           TAEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK
Sbjct: 71  TAEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 114

[Close]
BLAST of ClCG10G001440 vs. NCBI nr
Match: KAA0053029.1 (UDP-N-acetylglucosamine transferase subunit ALG14 [Cucumis melo var. makuwa])

HSP 1 Score: 162.2 bits (409), Expect = 5.4e-36
Identity = 90/103 (87.38%), Postives = 91/103 (88.35%), Query Frame = 0 

Query: 68  GIVLLLPLMDSSVTIATVILSISLILSRVLYVIYWSGRPLRNKSLGPVR--------GHT 127
           G V LL LMDSSVTIATVILSISLILSR+LYVIYWSGRPLRNKSLGPV         GHT
Sbjct: 3   GFVRLLLLMDSSVTIATVILSISLILSRILYVIYWSGRPLRNKSLGPVSTLIVLGSGGHT 62

Query: 128 AEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 163
           AEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK
Sbjct: 63  AEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 105

[Close]
BLAST of ClCG10G001440 vs. NCBI nr
Match: XP_038904772.1 (UDP-N-acetylglucosamine transferase subunit ALG14 homolog [Benincasa hispida])

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-34
Identity = 85/95 (89.47%), Postives = 86/95 (90.53%), Query Frame = 0 

Query: 76  MDSSVTIATVILSISLILSRVLYVIYWSGRPLRNKSLGPVR--------GHTAEMLNVLS 135
           MDSSVTIATVILS+SLILSRVLYVIYWSGRPLRNKSLGPV         GHTAEMLNVLS
Sbjct: 1   MDSSVTIATVILSVSLILSRVLYVIYWSGRPLRNKSLGPVSTLIVLGSGGHTAEMLNVLS 60

Query: 136 VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 163
           VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK
Sbjct: 61  VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 95

[Close]
BLAST of ClCG10G001440 vs. NCBI nr
Match: XP_008448662.1 (PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 [Cucumis melo] >XP_008448663.1 PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 [Cucumis melo] >XP_008448665.1 PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 [Cucumis melo] >XP_008448666.1 PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 [Cucumis melo])

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-34
Identity = 85/95 (89.47%), Postives = 86/95 (90.53%), Query Frame = 0 

Query: 76  MDSSVTIATVILSISLILSRVLYVIYWSGRPLRNKSLGPVR--------GHTAEMLNVLS 135
           MDSSVTIATVILSISLILSR+LYVIYWSGRPLRNKSLGPV         GHTAEMLNVLS
Sbjct: 1   MDSSVTIATVILSISLILSRILYVIYWSGRPLRNKSLGPVSTLIVLGSGGHTAEMLNVLS 60

Query: 136 VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 163
           VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK
Sbjct: 61  VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 95

[Close]
BLAST of ClCG10G001440 vs. NCBI nr
Match: XP_004148745.1 (UDP-N-acetylglucosamine transferase subunit ALG14 homolog [Cucumis sativus] >XP_004148746.1 UDP-N-acetylglucosamine transferase subunit ALG14 homolog [Cucumis sativus] >XP_011650339.1 UDP-N-acetylglucosamine transferase subunit ALG14 homolog [Cucumis sativus] >XP_031739300.1 UDP-N-acetylglucosamine transferase subunit ALG14 homolog [Cucumis sativus] >KGN55738.1 hypothetical protein Csa_010806 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-34
Identity = 85/95 (89.47%), Postives = 86/95 (90.53%), Query Frame = 0 

Query: 76  MDSSVTIATVILSISLILSRVLYVIYWSGRPLRNKSLGPVR--------GHTAEMLNVLS 135
           MDSSVTIATVILSISLILSR+LYVIYWSGRPLRNKSLGPV         GHTAEMLNVLS
Sbjct: 1   MDSSVTIATVILSISLILSRILYVIYWSGRPLRNKSLGPVSTLIVLGSGGHTAEMLNVLS 60

Query: 136 VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 163
           VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK
Sbjct: 61  VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 95

[Close]
BLAST of ClCG10G001440 vs. ExPASy Swiss-Prot
Match: O14199 (UDP-N-acetylglucosamine transferase subunit alg14 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=alg14 PE=3 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.7e-04
Identity = 21/43 (48.84%), Postives = 27/43 (62.79%), Query Frame = 0 

Query: 117 GHTAEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQL 160
           GHT EMLN+L+ L   L+S R Y+A + D MS+ KA    N L
Sbjct: 45  GHTGEMLNLLNALDDKLYSVRSYVAGSDDTMSVSKASLLSNSL 87

[Close]
BLAST of ClCG10G001440 vs. ExPASy TrEMBL
Match: A0A5D3CJY0 (UDP-N-acetylglucosamine transferase subunit ALG14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001460 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 2.0e-36
Identity = 90/104 (86.54%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 67  LGIVLLLPLMDSSVTIATVILSISLILSRVLYVIYWSGRPLRNKSLGPVR--------GH 126
           +G V LL LMDSSVTIATVILSISLILSR+LYVIYWSGRPLRNKSLGPV         GH
Sbjct: 11  IGFVRLLLLMDSSVTIATVILSISLILSRILYVIYWSGRPLRNKSLGPVSTLIVLGSGGH 70

Query: 127 TAEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 163
           TAEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK
Sbjct: 71  TAEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 114

[Close]
BLAST of ClCG10G001440 vs. ExPASy TrEMBL
Match: A0A5A7UHT2 (UDP-N-acetylglucosamine transferase subunit ALG14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold344G001430 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 2.6e-36
Identity = 90/103 (87.38%), Postives = 91/103 (88.35%), Query Frame = 0 

Query: 68  GIVLLLPLMDSSVTIATVILSISLILSRVLYVIYWSGRPLRNKSLGPVR--------GHT 127
           G V LL LMDSSVTIATVILSISLILSR+LYVIYWSGRPLRNKSLGPV         GHT
Sbjct: 3   GFVRLLLLMDSSVTIATVILSISLILSRILYVIYWSGRPLRNKSLGPVSTLIVLGSGGHT 62

Query: 128 AEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 163
           AEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK
Sbjct: 63  AEMLNVLSVLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 105

[Close]
BLAST of ClCG10G001440 vs. ExPASy TrEMBL
Match: A0A1S3BK86 (UDP-N-acetylglucosamine transferase subunit ALG14 OS=Cucumis melo OX=3656 GN=LOC103490767 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 5.0e-35
Identity = 85/95 (89.47%), Postives = 86/95 (90.53%), Query Frame = 0 

Query: 76  MDSSVTIATVILSISLILSRVLYVIYWSGRPLRNKSLGPVR--------GHTAEMLNVLS 135
           MDSSVTIATVILSISLILSR+LYVIYWSGRPLRNKSLGPV         GHTAEMLNVLS
Sbjct: 1   MDSSVTIATVILSISLILSRILYVIYWSGRPLRNKSLGPVSTLIVLGSGGHTAEMLNVLS 60

Query: 136 VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 163
           VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK
Sbjct: 61  VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 95

[Close]
BLAST of ClCG10G001440 vs. ExPASy TrEMBL
Match: A0A0A0L1T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009440 PE=3 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 5.0e-35
Identity = 85/95 (89.47%), Postives = 86/95 (90.53%), Query Frame = 0 

Query: 76  MDSSVTIATVILSISLILSRVLYVIYWSGRPLRNKSLGPVR--------GHTAEMLNVLS 135
           MDSSVTIATVILSISLILSR+LYVIYWSGRPLRNKSLGPV         GHTAEMLNVLS
Sbjct: 1   MDSSVTIATVILSISLILSRILYVIYWSGRPLRNKSLGPVSTLIVLGSGGHTAEMLNVLS 60

Query: 136 VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 163
           VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK
Sbjct: 61  VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 95

[Close]
BLAST of ClCG10G001440 vs. ExPASy TrEMBL
Match: A0A6J1CUH8 (UDP-N-acetylglucosamine transferase subunit ALG14 OS=Momordica charantia OX=3673 GN=LOC111014889 PE=3 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 2.5e-34
Identity = 84/95 (88.42%), Postives = 85/95 (89.47%), Query Frame = 0 

Query: 76  MDSSVTIATVILSISLILSRVLYVIYWSGRPLRNKSLGPVR--------GHTAEMLNVLS 135
           MDSSV IATVILSISLILSRVLYVIYWSGRP+RNKSLGPV         GHTAEMLNVLS
Sbjct: 1   MDSSVAIATVILSISLILSRVLYVIYWSGRPIRNKSLGPVSTLIVLGSGGHTAEMLNVLS 60

Query: 136 VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 163
           VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK
Sbjct: 61  VLQKDLFSPRFYIAAATDNMSLQKARTYENQLADK 95

[Close]
BLAST of ClCG10G001440 vs. TAIR 10
Match: AT4G18230.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligosaccharide biosynthesis protein Alg14 like (InterPro:IPR013969); Has 640 Blast hits to 640 proteins in 277 species: Archae - 4; Bacteria - 281; Metazoa - 94; Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). )

HSP 1 Score: 91.7 bits (226), Expect = 8.4e-19
Identity = 52/87 (59.77%), Postives = 66/87 (75.86%), Query Frame = 0 

Query: 85  VILSISLILSRVLYVIYWSGRPLRNKS---------LGPVRGHTAEMLNVLSVLQKDLFS 144
           +IL+I L++ RVLYVIY  G+PL   +         LG   GHTAEML++LSVL+KD F+
Sbjct: 22  IILAIVLLMVRVLYVIYRCGKPLPKGASQSFTTLIVLGS-GGHTAEMLSLLSVLRKDRFT 81

Query: 145 PRFYIAAATDNMSLQKARTYENQLADK 163
           PRFYIAAATDNMSLQKAR++E+ LA+K
Sbjct: 82  PRFYIAAATDNMSLQKARSFEDSLAEK 107

The following BLAST results are available for this feature:
BLAST of ClCG10G001440 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK11484.14.2e-3686.54UDP-N-acetylglucosamine transferase subunit ALG14 [Cucumis melo var. makuwa][more]
KAA0053029.15.4e-3687.38UDP-N-acetylglucosamine transferase subunit ALG14 [Cucumis melo var. makuwa][more]
XP_038904772.11.0e-3489.47UDP-N-acetylglucosamine transferase subunit ALG14 homolog [Benincasa hispida][more]
XP_008448662.11.0e-3489.47PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 [Cucumis melo] >XP_... [more]
XP_004148745.11.0e-3489.47UDP-N-acetylglucosamine transferase subunit ALG14 homolog [Cucumis sativus] >XP_... [more]
BLAST of ClCG10G001440 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O141995.7e-0448.84UDP-N-acetylglucosamine transferase subunit alg14 OS=Schizosaccharomyces pombe (... [more]
BLAST of ClCG10G001440 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CJY02.0e-3686.54UDP-N-acetylglucosamine transferase subunit ALG14 OS=Cucumis melo var. makuwa OX... [more]
A0A5A7UHT22.6e-3687.38UDP-N-acetylglucosamine transferase subunit ALG14 OS=Cucumis melo var. makuwa OX... [more]
A0A1S3BK865.0e-3589.47UDP-N-acetylglucosamine transferase subunit ALG14 OS=Cucumis melo OX=3656 GN=LOC... [more]
A0A0A0L1T85.0e-3589.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009440 PE=3 SV=1[more]
A0A6J1CUH82.5e-3488.42UDP-N-acetylglucosamine transferase subunit ALG14 OS=Momordica charantia OX=3673... [more]
BLAST of ClCG10G001440 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G18230.18.4e-1959.77FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013969Oligosaccharide biosynthesis protein Alg14-likePFAMPF08660Alg14coord: 117..163
e-value: 8.7E-10
score: 38.8
IPR013969Oligosaccharide biosynthesis protein Alg14-likePANTHERPTHR12154GLYCOSYL TRANSFERASE-RELATEDcoord: 78..161

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG10G001440.1ClCG10G001440.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006488 dolichol-linked oligosaccharide biosynthetic process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031965 nuclear membrane
cellular_component GO:0043541 UDP-N-acetylglucosamine transferase complex
molecular_function GO:0016740 transferase activity