ClCG10G000810 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG10G000810
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Mediator of RNA polymerase II transcription subunit 10
Location	CG_Chr10: 836218 .. 841652 (-)
RNA-Seq Expression	ClCG10G000810
Synteny	ClCG10G000810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAAATAGTTGAAGTCCTTACCTACTACTAAAATATTAGATTTGGCATTAAATCCCCAATTAGACCTCTTTTGACATCCCTCTCGGATTCAAAGCTTCACGCTTCCACCACGGTTTAACATTCAGCCCTTGCCCCCCGCTCGATTTTCTCCTCCATCTTCCCCCAACAAGTAAGAAATTCAAGTTCTTTGTTCTTTTAATTCTCAATTCTTTGATTTCAGACGTCCGCTACTTTGCTTCTCTATCGATTTCTGAGAATTATTATTCTTCGGTCCTTGATTTTGTAATTCTAATCTGCGGGAGCGTTTCTCCTTCCATTGTTTGACTGGAGTATTTGGTTTACGGCGACATGATTGATTTTCTTTTCATTTCTTTTGGGCTATTCTAGTTCAAGCTTGTTAGGATTTGTGGGGTTTCATACCAGTCGTAGGGTTCTTTTTTTCTCCTTCCTCAAGGATACTGTGGAGGTAATAGATCGAGTCCCTTCACTTTAGGGTTCGCTTACTTGGACTTTCTCACTGGCCGAAGGAAGTAATTTCGTTATAAATGTATTTGCTACTGCTCTACATATGGGGATGTCTATTGTGAATCTAAATTTTTGATATATACAAAGGCTAAATTTGTGATATTGTGAAAAAATGAAATGAGCTAGGGACAGTTGGGAGAGTTAGTAATTGTTGAGTATATGTACAGAACGATCAACTATTGCTGGCGCTGAGTATGTCACTGGCCATAATTAACGAAGCTAGTGGGGATTGGCCAGTTCATCTAACCAATGAAAATTGATAACAACAACCAAATAGTAGCCATATGATAAAGTACTTAATAACTCTTTTATATTGAATTGTTGGAAAATAGGCATTTCTGAGCTCCAAGGTGTTTAGGAAGTGGAAAGAAGATAATGGATTCAGCTCAGAATGCATCTTCAGCTGCTGGGACTGGTGGAAGCGGTGGGAATGGATCCGTCATCAATGATACATCAGCATCAACTACAGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAACTCCATACAGAAAACTTTGGGTATCCTCCATCAGCTCAACCTCACCGTTTCCAACTTCAATGCCGCCTATCAGCTGCCTCTTTTACAACGCCTGTATGTGCAGTTTTCCTTCATCTAAGATCTAATTTGTTCTTTATTCACTCCTTGTAACTCTATACCAGTGATCCGTTTCTTGATTTTGCAGTAATTCTCTAGTTTTGGAGCTAGATAACATGGTTAAATTATCAGAGAAATGCACCATCCAGGTCCCTATGGAGGTTCTTAAGTGAGTGTTTGTACACCTATTCTGCTCTCTAGCTTTGCAAGCTTTTTAATTTTTTGAACTCCTATTTTTTCATGGTCCACTTGTTACTTTTCCTTTGATTAGTTTGATCGATGACGGGAAGAATCCAGATGAATTCACGAGGGATGTTTTAAATAGTTGCATTGCAAAAAATCAGAGTACAAAAGGCAAAACTGATGCCTTCAAGGTAGTCCTTACGGCTCCATGTGGCAGGCTATTAAAAATCTATTTGTTATCTTATTTGTATCTTTGTTTCCATAAATTCACGAAAATCTTTATTGAATGTTGTCCTACTTACTACATTCAGGGTTTACGGAAGCATCTTTTGGAGGAACTTGAACAGACATTTCCTGATGAAGTTGAATCTTACAGAGAAATTCGTGCCGCTTCTGCTGCCGTGAGTTGAAATTCATTTCAATTTTATCTCAGAATGATTGGATATATGCATGTTTGTTTTCTAATTTCTCAAAAACATTTTCTTGACTTTTATGGTTTAATTTTTTCTTTATCTATAATCATAAGCTAGATTTATTTTCTAAATCTGCATCATCCTTTCCTCAGGTAATAGTTGCTTTATTTTAAAGTTTCTATTGGTTTTCTGTTAGTGTCAAAAAATGAGAGGAAACAAACAGCATTTTTGTTTTGTGATTCATAGGAGGATTGAATTCTGCTTGCTTAAAAACTACCTTCTGGTTATTTTGTAAACATCTCTCAAGCCAATTTCACATTGAAATATTTTCCTTTGTGAATGAAATGGTTTAACGAAGTAGGAATCAGATTAAAGTACTTTATCTCCTAGTTTGTTGAACAAAGTTCTGTGATTACCTTATGTGAAGTAACGATCTTCGAGTACTTCCTGCCTCTAATTCTATTAACATCCTTCCACTTTTGGCGCAAGATTGATGGTATGGTTAAAAACCATGATAGTAATCAGTGATCACAGGCCTGCTTATTGCAATTGGTGTCTGTCTGTATATATGCTAATATTACCGTTCTCGAGCATGATTTCTTTCCTTGTGACTCAGATACAACAAATTTGATATGAGCTAGAATTTCATTGCAATATCAGTGGAATCAGTATAGACTCTCTAGAGGGTTAACGCTCCCCTACGAAAATTTTCCAAGTGATCAATGAGTTCAAAATTTTGACTAATTTACACATCTAAAATTCTAATATTACTCTACCTATGAAACATGAAACAACCTTGTTCTCGAAAGGTTTGGATGAGTACTGTTTAGGACCATCTAGACTTACTACATCCATCTTGCGTGAGATAAGAGGTTCAGCTACAATCATTGCTTAAATATCTTCCGTTAGATGGGGACCACAGAATCCAAGTGTCAAATCCTTGTCTTCCAGTAAGTCGGCCTTCCAATTTTTCACCATGGGCTGGTGGCTCTCTTCGCCCATCTTTTCCTGTTTGTCTTTTCCTTGTGCTGTCTAGTTGAATTGTTTTATTTCTCCCATTCCAATATCAATCCAACCCATAATATTGGTAAAAATGTATGGGCAAAAGAAGCACACAAATTGTGCCAATATTTTCCTATTTTCCAGTTCTCTTCCCGAGATCAAATGGCTCGGATATCAATTTGGTTGAATCCTGATCTTGAAACTGAGAAGAAAATGGAAGATAAAACTGGATTGCTATAAATATGTGGGCAATAACCTTTTGGGACGACTGTCCCTTTCCTTCAACCTCTACTGACAAACTCATCATCTTATAGCATAGTATTAAGCTTCTACTTTTCTTAAGCAGCTATCTTGTGAGATCTTTTGACCAGTTAAAAGGCCTAAGGATATTCTTGATTTTGATTTTTCTTCAGTTATTCATCAAGATTGCCATAAAAGTAGATTGTTCATTATGTCATTGGGGTCAGATTTTAATCTTGTTCCAACAAATGTAGGAAGCAAAAAGGATAGCGCAATCACAAAGTATGTTACCAAATGGGGATATGAAGGTTAAGATGGAGGTTTAAGTGCCTTCTGCGTTAATTATCAGGTAGTTGAAGTTCTTTGCTTGCCATTATTCTTTATTATGTCTTCAGCATATTATCATATTGATTGGCCAGCATATATTACATGATTTTAGTCTCATTCAAGGGATTGATAATGGAATAACATAATTCTTCTTTATATATGCACACATATATGTAAAAGAGAATAACATCATCCTCTATTCTATTACTGTATGTAACCTTGCTGGGAGGTTGCATTGTGCAATGCTGTGACGTGATGTCGAGTGAAAGATGGTTGCTTCCCATATTTTGGGTTTATTTAGCAATTCAAATTCAAGTTTCTTGACTTAAGCATGTGTGTTTCTTAAACCATCATGGGTTGGCCTAGTGGTAAATAAGAGAACACCTCCTTAATAAAGGGCTAAGAGGTCATGGGTTCAATCCATGGTGGCCACCTACCTAGGATTTAATATCCTATGAGTTTTCTTGACACCCAAATGTTGTAGAGTTGGGCGAATTGTCTCGTGAGATTAGTTGAGGTGTGTGTATGCTAGCCCGAACAGTCATGGATATAAAAAAAAGTGTGTTTCTTCAATGCTTTTGGAATTTTGAATGATGATAATGTGACTTTTACTAGAGTTATACTTAAAAAAACGAGTTTGATATTTGACATAGTTCCAACCTAAGCATAGTTTAATTAATTAATTAAGAGGTTATACGATTTTCTTAAAGTCAAATGTTTGAATCTTTATATGGCAGGGAATTCGTTCTTATTTATACTCATTTTAAGTCAAAGAACATTTTTCAAGATCGAATTTTCTCGCTCAAAATAGGTGAGGTGGCTGTATCTTGGTTTCTCTAGTCAAGACTGTGCGGCAGACAACATGGGATTTGATGACGGCTAATGAATCAAGACTGCAAAAGCCACACAAGAATAAACATCTAACTGGAACTATCGTATTATACTCATATTCATTGGGCGAGTCAAGGCGGAGAAGAATCACACTATCCTCAAACATCAAACTTTGGATTTTACTGGCAGTATCAACCCCATTCAGTGTGTCTGATTCAAGTTTTATTTTACTTTTTACTTGGTAAATGAATGTTTCCGCAACTGGATTCTCACTTTTCTGTTAATAAGTATTGTAAATTCGTATACTGATTCCTTGCCTCATCTCAGTCTCTTTGAATTTAACTTATAAATCTCGTCTCTAACCATGCTGATAAACTACATAAACTATGACTTTAGACTTCAAAAAAATTTATTTCTTTTCTTTTTTTTTGGGGAAAGAAAAATGGAAATGCATTAACATGCAATTAATCAGGTATGACAACCTCAAAAATAGTAAAGACCCAAAAATATTATATGAAGTCCATGGTGTTTTAACCCTTGATGGCTTAGGAGTCACGCACCACCACCTTAGTCCTCATTTATGCTCGTTCCAAGAGGTGTCAGAGTTCATCTTCCAGCTTCTTTGCGACGGTGGGCACCAGGAACCTTGACTCAGGTGGCTCTCCAATCTTGGCATGATCTGGTCAGTAAACCCTTTCATCTCCATGACAATCAATAATGTATTTGTCAATAGTTGTATGAATTATTCGTTAAGTTTGGTGTGCCTTGTTGAGTTTGATCTGATTCCTGTGATTCCAATAAACTCGAAAGGGATTATTTTGCAGCTCCACATAGCATGAGTTGTGGATAATGGCCTGGGAATCCTCTTGGGTGAAATTTTCCATGACCAAAGCTTCCTTTCACACCCCTTTGTCATCCAAGAGAAACCCCATCCCATTATCCTTAAAACTATCTTTGACAGGGATTGCCTTACACTTTCCCCTTCTGTTGATCCAAGAATCTTGTTCAATCATATGTGTCTTCCACTAAAGCGATTTTAAAAAAATCGCTTATCTTGGAAGTACTTCCCTTTTAGTACTCTAGTTAAAAGACTATTAGTTTGGAATTAGAACGTTTACATGAGCACAGCCGCCAGTGTACTTTACCCTTGCCTTTGAAATGTTCCACACAATTCCACCAGATTCAAACACATATTTCATTCATCTCTTCTATAGTGTATGTACGAGTTGCTAATTTCCTTTCCCGCTGAGAAAAAAAAAAAAAAAAAGAAGAAGCCCTTTTAGCTTTGTAGGACAAGAAAAATGCAGAGAC

mRNA sequence

TTTAAATAGTTGAAGTCCTTACCTACTACTAAAATATTAGATTTGGCATTAAATCCCCAATTAGACCTCTTTTGACATCCCTCTCGGATTCAAAGCTTCACGCTTCCACCACGGTTTAACATTCAGCCCTTGCCCCCCGCTCGATTTTCTCCTCCATCTTCCCCCAACAAGCATTTCTGAGCTCCAAGGTGTTTAGGAAGTGGAAAGAAGATAATGGATTCAGCTCAGAATGCATCTTCAGCTGCTGGGACTGGTGGAAGCGGTGGGAATGGATCCGTCATCAATGATACATCAGCATCAACTACAGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAACTCCATACAGAAAACTTTGGGTATCCTCCATCAGCTCAACCTCACCGTTTCCAACTTCAATGCCGCCTATCAGCTGCCTCTTTTACAACGCCTTAATTCTCTAGTTTTGGAGCTAGATAACATGGTTAAATTATCAGAGAAATGCACCATCCAGGTCCCTATGGAGGTTCTTAATTTGATCGATGACGGGAAGAATCCAGATGAATTCACGAGGGATGTTTTAAATAGTTGCATTGCAAAAAATCAGAGTACAAAAGGCAAAACTGATGCCTTCAAGGTAGTCCTTACGGCTCCATGTGGCAGGCTATTAAAAATCTATTTGTTATCTTATTTGTATCTTTGTTTCCATAAATTCACGAAAATCTTTATTGAATGTTGTCCTACTTACTACATTCAGGGTTTACGGAAGCATCTTTTGGAGGAACTTGAACAGACATTTCCTGATGAAGTTGAATCTTACAGAGAAATTCGTGCCGCTTCTGCTGCCTTTGTTGAACAAAGTTCTGTGATTACCTTATGTGAAGTAACGATCTTCGAGTACTTCCTGCCTCTAATTCTATTAACATCCTTCCACTTTTGGCGCAAGATTGATGATGGGGACCACAGAATCCAAGTGTCAAATCCTTGTCTTCCAGTAAGTCGGCCTTCCAATTTTTCACCATGGGCTGGTGGCTCTCTTCGCCCATCTTTTCCTCATAGTATTAAGCTTCTACTTTTCTTAAGCAGCTATCTTGTGAGATCTTTTGACCAGTTAAAAGGCCTAAGGATATTCTTGATTTTGATTTTTCTTCAGTTATTCATCAAGATTGCCATAAAAGAAGCAAAAAGGATAGCGCAATCACAAAGTATGTTACCAAATGGGGATATGAAGGTTAAGATGGAGGTTTAAGTGCCTTCTGCGTTAATTATCAGGGAATTCGTTCTTATTTATACTCATTTTAAGTCAAAGAACATTTTTCAAGATCGAATTTTCTCGCTCAAAATAGGTGAGGTGGCTGTATCTTGGTTTCTCTAGTCAAGACTGTGCGGCAGACAACATGGGATTTGATGACGGCTAATGAATCAAGACTGCAAAAGCCACACAAGAATAAACATCTAACTGGAACTATCGTATTATACTCATATTCATTGGGCGAGTCAAGGCGGAGAAGAATCACACTATCCTCAAACATCAAACTTTGGATTTTACTGGCAGTATCAACCCCATTCAGTGTGTCTGATTCAAGTTTTATTTTACTTTTTACTTGGTAAATGAATGTTTCCGCAACTGGATTCTCACTTTTCTGTTAATAAGTATTGTAAATTCGTATACTGATTCCTTGCCTCATCTCAGTCTCTTTGAATTTAACTTATAAATCTCGTCTCTAACCATGCTGATAAACTACATAAACTATGACTTTAGACTTCAAAAAAATTTATTTCTTTTCTTTTTTTTTGGGGAAAGAAAAATGGAAATGCATTAACATGCAATTAATCAGGTATGACAACCTCAAAAATAGTAAAGACCCAAAAATATTATATGAAGTCCATGGTGTTTTAACCCTTGATGGCTTAGGAGTCACGCACCACCACCTTAGTCCTCATTTATGCTCGTTCCAAGAGGTGTCAGAGTTCATCTTCCAGCTTCTTTGCGACGGTGGGCACCAGGAACCTTGACTCAGGTGGCTCTCCAATCTTGGCATGATCTGGTCAGTAAACCCTTTCATCTCCATGACAATCAATAATGTATTTGTCAATAGTTGTATGAATTATTCGTTAAGTTTGGTGTGCCTTGTTGAGTTTGATCTGATTCCTGTGATTCCAATAAACTCGAAAGGGATTATTTTGCAGCTCCACATAGCATGAGTTGTGGATAATGGCCTGGGAATCCTCTTGGGTGAAATTTTCCATGACCAAAGCTTCCTTTCACACCCCTTTGTCATCCAAGAGAAACCCCATCCCATTATCCTTAAAACTATCTTTGACAGGGATTGCCTTACACTTTCCCCTTCTGTTGATCCAAGAATCTTGTTCAATCATATGTGTCTTCCACTAAAGCGATTTTAAAAAAATCGCTTATCTTGGAAGTACTTCCCTTTTAGTACTCTAGTTAAAAGACTATTAGTTTGGAATTAGAACGTTTACATGAGCACAGCCGCCAGTGTACTTTACCCTTGCCTTTGAAATGTTCCACACAATTCCACCAGATTCAAACACATATTTCATTCATCTCTTCTATAGTGTATGTACGAGTTGCTAATTTCCTTTCCCGCTGAGAAAAAAAAAAAAAAAAAGAAGAAGCCCTTTTAGCTTTGTAGGACAAGAAAAATGCAGAGAC

Coding sequence (CDS)

ATGGATTCAGCTCAGAATGCATCTTCAGCTGCTGGGACTGGTGGAAGCGGTGGGAATGGATCCGTCATCAATGATACATCAGCATCAACTACAGTGGATGATTCAAAGCAAAACTTGAACCAAGTAATCAACTCCATACAGAAAACTTTGGGTATCCTCCATCAGCTCAACCTCACCGTTTCCAACTTCAATGCCGCCTATCAGCTGCCTCTTTTACAACGCCTTAATTCTCTAGTTTTGGAGCTAGATAACATGGTTAAATTATCAGAGAAATGCACCATCCAGGTCCCTATGGAGGTTCTTAATTTGATCGATGACGGGAAGAATCCAGATGAATTCACGAGGGATGTTTTAAATAGTTGCATTGCAAAAAATCAGAGTACAAAAGGCAAAACTGATGCCTTCAAGGTAGTCCTTACGGCTCCATGTGGCAGGCTATTAAAAATCTATTTGTTATCTTATTTGTATCTTTGTTTCCATAAATTCACGAAAATCTTTATTGAATGTTGTCCTACTTACTACATTCAGGGTTTACGGAAGCATCTTTTGGAGGAACTTGAACAGACATTTCCTGATGAAGTTGAATCTTACAGAGAAATTCGTGCCGCTTCTGCTGCCTTTGTTGAACAAAGTTCTGTGATTACCTTATGTGAAGTAACGATCTTCGAGTACTTCCTGCCTCTAATTCTATTAACATCCTTCCACTTTTGGCGCAAGATTGATGATGGGGACCACAGAATCCAAGTGTCAAATCCTTGTCTTCCAGTAAGTCGGCCTTCCAATTTTTCACCATGGGCTGGTGGCTCTCTTCGCCCATCTTTTCCTCATAGTATTAAGCTTCTACTTTTCTTAAGCAGCTATCTTGTGAGATCTTTTGACCAGTTAAAAGGCCTAAGGATATTCTTGATTTTGATTTTTCTTCAGTTATTCATCAAGATTGCCATAAAAGAAGCAAAAAGGATAGCGCAATCACAAAGTATGTTACCAAATGGGGATATGAAGGTTAAGATGGAGGTTTAA

Protein sequence

MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQGLRKHLLEELEQTFPDEVESYREIRAASAAFVEQSSVITLCEVTIFEYFLPLILLTSFHFWRKIDDGDHRIQVSNPCLPVSRPSNFSPWAGGSLRPSFPHSIKLLLFLSSYLVRSFDQLKGLRIFLILIFLQLFIKIAIKEAKRIAQSQSMLPNGDMKVKMEV

Homology

[Close]

BLAST of ClCG10G000810 vs. NCBI nr
Match: KAG7015809.1 (Mediator of RNA polymerase II transcription subunit 10b [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291.6 bits (745), Expect = 8.8e-75
Identity = 168/216 (77.78%), Postives = 172/216 (79.63%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQGLRK 180
           CIAKNQSTKGKTDAFK                                        GLRK
Sbjct: 121 CIAKNQSTKGKTDAFK----------------------------------------GLRK 176

Query: 181 HLLEELEQTFPDEVESYREIRAASAAF-VEQSSVIT 216
           HLLEELEQTFPDEVESYREIRAASAA  +++ S IT
Sbjct: 181 HLLEELEQTFPDEVESYREIRAASAAVRIKKDSAIT 176

[Close]

BLAST of ClCG10G000810 vs. NCBI nr
Match: XP_022923485.1 (mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923486.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923487.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923488.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923489.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923491.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022923492.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata] >XP_022965379.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965380.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965381.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965383.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965384.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965385.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_022965386.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita maxima] >XP_023553208.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553209.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553210.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553211.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo] >XP_023553212.1 mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.0 bits (741), Expect = 2.6e-74
Identity = 165/206 (80.10%), Postives = 166/206 (80.58%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQGLRK 180
           CIAKNQSTKGKTDAFK                                        GLRK
Sbjct: 121 CIAKNQSTKGKTDAFK----------------------------------------GLRK 166

Query: 181 HLLEELEQTFPDEVESYREIRAASAA 207
           HLLEELEQTFPDEVESYREIRAASAA
Sbjct: 181 HLLEELEQTFPDEVESYREIRAASAA 166

[Close]

BLAST of ClCG10G000810 vs. NCBI nr
Match: XP_016900643.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X2 [Cucumis melo])

HSP 1 Score: 288.5 bits (737), Expect = 7.5e-74
Identity = 165/208 (79.33%), Postives = 165/208 (79.33%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTS STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKC IQVPMEVLNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQGLRK 180
           CIAKNQSTKGKTDAFK                                        GLRK
Sbjct: 121 CIAKNQSTKGKTDAFK----------------------------------------GLRK 168

Query: 181 HLLEELEQTFPDEVESYREIRAASAAFV 209
           HLLEELEQTFPDEVESYREIRAASAA V
Sbjct: 181 HLLEELEQTFPDEVESYREIRAASAAMV 168

[Close]

BLAST of ClCG10G000810 vs. NCBI nr
Match: KAG6577769.1 (Mediator of RNA polymerase II transcription subunit 10b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 288.5 bits (737), Expect = 7.5e-74
Identity = 167/229 (72.93%), Postives = 175/229 (76.42%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQGLRK 180
           CIAKNQSTKGKTDAFK                                        GLRK
Sbjct: 121 CIAKNQSTKGKTDAFK----------------------------------------GLRK 180

Query: 181 HLLEELEQTFPDEVESYREIRAASAAFVEQSSVITLCEVTIFEYFLPLI 230
           HLLEELEQTFPDEVESYREIRAASAA  ++ +   +    I   F+ ++
Sbjct: 181 HLLEELEQTFPDEVESYREIRAASAAESKRIAQSQMLSALIIREFVLIL 189

[Close]

BLAST of ClCG10G000810 vs. NCBI nr
Match: XP_008448559.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo] >XP_008448560.1 PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo] >XP_008448561.1 PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [Cucumis melo])

HSP 1 Score: 287.3 bits (734), Expect = 1.7e-73
Identity = 164/206 (79.61%), Postives = 164/206 (79.61%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTS STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKC IQVPMEVLNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQGLRK 180
           CIAKNQSTKGKTDAFK                                        GLRK
Sbjct: 121 CIAKNQSTKGKTDAFK----------------------------------------GLRK 166

Query: 181 HLLEELEQTFPDEVESYREIRAASAA 207
           HLLEELEQTFPDEVESYREIRAASAA
Sbjct: 181 HLLEELEQTFPDEVESYREIRAASAA 166

[Close]

BLAST of ClCG10G000810 vs. ExPASy Swiss-Prot
Match: F4HPA7 (Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana OX=3702 GN=MED10B PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.7e-52
Identity = 127/214 (59.35%), Postives = 145/214 (67.76%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSV---IND-TSASTTVDDSKQNLNQVINSIQKTLGILHQL 60
           MD  QN S  AG GGS  NG++    ND TS  T  DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRD 120
           +LTV++F  A QL LLQRLNSLV+ELDNM KLSEKC IQ+PMEVLNLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQ 180
           VLNSCIA+NQ TKGKTDAFK                                        
Sbjct: 121 VLNSCIARNQVTKGKTDAFK---------------------------------------- 170

Query: 181 GLRKHLLEELEQTFPDEVESYREIRAASAAFVEQ 211
            LRKH+LEELEQ FPDEV+ YREIRA+SAA  ++
Sbjct: 181 DLRKHILEELEQNFPDEVDMYREIRASSAAVTKR 170

[Close]

BLAST of ClCG10G000810 vs. ExPASy Swiss-Prot
Match: Q9FHZ2 (Mediator of RNA polymerase II transcription subunit 10a OS=Arabidopsis thaliana OX=3702 GN=MED10A PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.2e-47
Identity = 118/207 (57.00%), Postives = 135/207 (65.22%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MD  QN  + AG G    NGS+  + +A  TVDDS + LNQ+INS QK L +LHQL LTV
Sbjct: 1   MDQTQN--TIAGIGEI--NGSIKTEINAIATVDDSNEKLNQIINSNQKILELLHQLKLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRDVLN- 120
           S+F  A QL LLQRLNSLV+ELDNM KLS+KC IQVP+EVLNLIDDGKNPDEFT+DVLN 
Sbjct: 61  SSFTPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLNK 120

Query: 121 SCIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQGLR 180
           +CIAKNQ TKGK+DAFK                                        GLR
Sbjct: 121 NCIAKNQVTKGKSDAFK----------------------------------------GLR 163

Query: 181 KHLLEELEQTFPDEVESYREIRAASAA 207
           KHLLEELEQ FPDEV+ YR+IRA+ AA
Sbjct: 181 KHLLEELEQAFPDEVDRYRDIRASYAA 163

[Close]

BLAST of ClCG10G000810 vs. ExPASy Swiss-Prot
Match: Q16G71 (Mediator of RNA polymerase II transcription subunit 10 OS=Aedes aegypti OX=7159 GN=MED10 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 7.2e-11
Identity = 44/163 (26.99%), Postives = 77/163 (47.24%), Query Frame = 0


Query: 39  LNQVINSIQKTLGILHQLNLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPM 98
           L  + N ++  +  + Q+ + VS+F    Q  L Q++ SLV  L  + KL  +  + VP+
Sbjct: 5   LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQVDVNVPL 64

Query: 99  EVLNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLC 158
           EV + ID G+NP  +T+D ++  + KN+  KGK D+++                      
Sbjct: 65  EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYR---------------------- 124

Query: 159 FHKFTKIFIECCPTYYIQGLRKHLLEELEQTFPDEVESYREIR 202
             KF                + +L++EL++TFP E+  Y+ IR
Sbjct: 125 --KF----------------KSNLMKELDETFPTEIAKYKAIR 127

[Close]

BLAST of ClCG10G000810 vs. ExPASy Swiss-Prot
Match: Q7Q5R5 (Mediator of RNA polymerase II transcription subunit 10 OS=Anopheles gambiae OX=7165 GN=MED10 PE=3 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-10
Identity = 44/163 (26.99%), Postives = 76/163 (46.63%), Query Frame = 0


Query: 39  LNQVINSIQKTLGILHQLNLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPM 98
           L  + N ++  +  + Q+ + VS+F    Q  L Q++ SLV  L  + KL  +  + VP+
Sbjct: 5   LENLENHLEMFIENVRQIRIIVSDFQPQGQNVLNQKIQSLVTGLQEIDKLKNQIDVNVPL 64

Query: 99  EVLNLIDDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLC 158
           EV + ID G+NP  +T+D ++  + KN+  KGK D+++                      
Sbjct: 65  EVFDYIDQGRNPQLYTKDCIDKALTKNEEVKGKIDSYR---------------------- 124

Query: 159 FHKFTKIFIECCPTYYIQGLRKHLLEELEQTFPDEVESYREIR 202
             KF                + +L++EL +TFP E+  Y+ IR
Sbjct: 125 --KF----------------KSNLMKELSETFPVEISKYKAIR 127

[Close]

BLAST of ClCG10G000810 vs. ExPASy Swiss-Prot
Match: Q9CXU0 (Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus OX=10090 GN=Med10 PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.0e-09
Identity = 45/157 (28.66%), Postives = 72/157 (45.86%), Query Frame = 0


Query: 46  IQKTLGILHQLNLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKC-TIQVPMEVLNLI 105
           ++K +  + QL + VS+F  + Q  L Q+LN +V  L ++ K  ++   I VP+EV   I
Sbjct: 12  LEKFVENIRQLGIIVSDFQPSSQAGLSQKLNFIVTGLQDIDKCRQQLHDITVPLEVFEYI 71

Query: 106 DDGKNPDEFTRDVLNSCIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTK 165
           D G+NP  +T++ L   +AKN+  KGK D  K                        KF  
Sbjct: 72  DQGRNPQLYTKECLERALAKNEQVKGKIDTMK------------------------KFKS 128

Query: 166 IFIECCPTYYIQGLRKHLLEELEQTFPDEVESYREIR 202
           +                L++EL + FP+++  YR IR
Sbjct: 132 L----------------LIQELSKVFPEDMAKYRSIR 128

[Close]

BLAST of ClCG10G000810 vs. ExPASy TrEMBL
Match: A0A6J1HLJ2 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita maxima OX=3661 GN=LOC111465259 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 165/206 (80.10%), Postives = 166/206 (80.58%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQGLRK 180
           CIAKNQSTKGKTDAFK                                        GLRK
Sbjct: 121 CIAKNQSTKGKTDAFK----------------------------------------GLRK 166

Query: 181 HLLEELEQTFPDEVESYREIRAASAA 207
           HLLEELEQTFPDEVESYREIRAASAA
Sbjct: 181 HLLEELEQTFPDEVESYREIRAASAA 166

[Close]

BLAST of ClCG10G000810 vs. ExPASy TrEMBL
Match: A0A6J1E6X8 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita moschata OX=3662 GN=LOC111431167 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 165/206 (80.10%), Postives = 166/206 (80.58%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEV+NLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVVNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQGLRK 180
           CIAKNQSTKGKTDAFK                                        GLRK
Sbjct: 121 CIAKNQSTKGKTDAFK----------------------------------------GLRK 166

Query: 181 HLLEELEQTFPDEVESYREIRAASAA 207
           HLLEELEQTFPDEVESYREIRAASAA
Sbjct: 181 HLLEELEQTFPDEVESYREIRAASAA 166

[Close]

BLAST of ClCG10G000810 vs. ExPASy TrEMBL
Match: A0A1S4DXE0 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo OX=3656 GN=LOC103490703 PE=3 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.6e-74
Identity = 165/208 (79.33%), Postives = 165/208 (79.33%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTS STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKC IQVPMEVLNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQGLRK 180
           CIAKNQSTKGKTDAFK                                        GLRK
Sbjct: 121 CIAKNQSTKGKTDAFK----------------------------------------GLRK 168

Query: 181 HLLEELEQTFPDEVESYREIRAASAAFV 209
           HLLEELEQTFPDEVESYREIRAASAA V
Sbjct: 181 HLLEELEQTFPDEVESYREIRAASAAMV 168

[Close]

BLAST of ClCG10G000810 vs. ExPASy TrEMBL
Match: A0A1S3BJY3 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo OX=3656 GN=LOC103490703 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 8.1e-74
Identity = 164/206 (79.61%), Postives = 164/206 (79.61%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTS STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKC IQVPMEVLNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQGLRK 180
           CIAKNQSTKGKTDAFK                                        GLRK
Sbjct: 121 CIAKNQSTKGKTDAFK----------------------------------------GLRK 166

Query: 181 HLLEELEQTFPDEVESYREIRAASAA 207
           HLLEELEQTFPDEVESYREIRAASAA
Sbjct: 181 HLLEELEQTFPDEVESYREIRAASAA 166

[Close]

BLAST of ClCG10G000810 vs. ExPASy TrEMBL
Match: A0A5D3CJS3 (Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo var. makuwa OX=1194695 GN=MED10 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 8.1e-74
Identity = 164/206 (79.61%), Postives = 164/206 (79.61%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MDSAQNASSAAGTGGSGGNGSVINDTS STTVDDSKQNLNQVINSIQKTLGILHQLNLTV
Sbjct: 1   MDSAQNASSAAGTGGSGGNGSVINDTSVSTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRDVLNS 120
           SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKC IQVPMEVLNLIDDGKNPDEFTRDVLNS
Sbjct: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCPIQVPMEVLNLIDDGKNPDEFTRDVLNS 120

Query: 121 CIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQGLRK 180
           CIAKNQSTKGKTDAFK                                        GLRK
Sbjct: 121 CIAKNQSTKGKTDAFK----------------------------------------GLRK 166

Query: 181 HLLEELEQTFPDEVESYREIRAASAA 207
           HLLEELEQTFPDEVESYREIRAASAA
Sbjct: 181 HLLEELEQTFPDEVESYREIRAASAA 166

[Close]

BLAST of ClCG10G000810 vs. TAIR 10
Match: AT1G26665.2 (Mediator complex, subunit Med10 )

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-53
Identity = 127/214 (59.35%), Postives = 145/214 (67.76%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSV---IND-TSASTTVDDSKQNLNQVINSIQKTLGILHQL 60
           MD  QN S  AG GGS  NG++    ND TS  T  DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRD 120
           +LTV++F  A QL LLQRLNSLV+ELDNM KLSEKC IQ+PMEVLNLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQ 180
           VLNSCIA+NQ TKGKTDAFK                                        
Sbjct: 121 VLNSCIARNQVTKGKTDAFK---------------------------------------- 170

Query: 181 GLRKHLLEELEQTFPDEVESYREIRAASAAFVEQ 211
            LRKH+LEELEQ FPDEV+ YREIRA+SAA  ++
Sbjct: 181 DLRKHILEELEQNFPDEVDMYREIRASSAAVTKR 170

[Close]

BLAST of ClCG10G000810 vs. TAIR 10
Match: AT1G26665.1 (Mediator complex, subunit Med10 )

HSP 1 Score: 207.6 bits (527), Expect = 1.6e-53
Identity = 127/210 (60.48%), Postives = 143/210 (68.10%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSV---IND-TSASTTVDDSKQNLNQVINSIQKTLGILHQL 60
           MD  QN S  AG GGS  NG++    ND TS  T  DDSK+NL+QVINSI+KTLG+LHQL
Sbjct: 1   MDPTQNTS--AGIGGS--NGTIRYQTNDGTSTVTVADDSKENLSQVINSIEKTLGVLHQL 60

Query: 61  NLTVSNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRD 120
           +LTV++F  A QL LLQRLNSLV+ELDNM KLSEKC IQ+PMEVLNLIDDGKNPDEFT+D
Sbjct: 61  HLTVTSFTPASQLHLLQRLNSLVMELDNMTKLSEKCNIQIPMEVLNLIDDGKNPDEFTKD 120

Query: 121 VLNSCIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQ 180
           VLNSCIA+NQ TKGKTDAFK                                        
Sbjct: 121 VLNSCIARNQVTKGKTDAFK---------------------------------------- 166

Query: 181 GLRKHLLEELEQTFPDEVESYREIRAASAA 207
            LRKH+LEELEQ FPDEV+ YREIRA+SAA
Sbjct: 181 DLRKHILEELEQNFPDEVDMYREIRASSAA 166

HSP 2 Score: 39.3 bits (90), Expect = 7.4e-03
Identity = 18/23 (78.26%), Postives = 21/23 (91.30%), Query Frame = 0


Query: 317 EAKRIAQSQSMLPNGDMKVKMEV 340
           EAKR+AQSQS+LPNGD KVK E+
Sbjct: 167 EAKRLAQSQSVLPNGDAKVKNEL 189

[Close]

BLAST of ClCG10G000810 vs. TAIR 10
Match: AT5G41910.1 (Mediator complex, subunit Med10 )

HSP 1 Score: 189.5 bits (480), Expect = 4.4e-48
Identity = 118/207 (57.00%), Postives = 135/207 (65.22%), Query Frame = 0


Query: 1   MDSAQNASSAAGTGGSGGNGSVINDTSASTTVDDSKQNLNQVINSIQKTLGILHQLNLTV 60
           MD  QN  + AG G    NGS+  + +A  TVDDS + LNQ+INS QK L +LHQL LTV
Sbjct: 1   MDQTQN--TIAGIGEI--NGSIKTEINAIATVDDSNEKLNQIINSNQKILELLHQLKLTV 60

Query: 61  SNFNAAYQLPLLQRLNSLVLELDNMVKLSEKCTIQVPMEVLNLIDDGKNPDEFTRDVLN- 120
           S+F  A QL LLQRLNSLV+ELDNM KLS+KC IQVP+EVLNLIDDGKNPDEFT+DVLN 
Sbjct: 61  SSFTPASQLHLLQRLNSLVMELDNMAKLSDKCNIQVPIEVLNLIDDGKNPDEFTKDVLNK 120

Query: 121 SCIAKNQSTKGKTDAFKVVLTAPCGRLLKIYLLSYLYLCFHKFTKIFIECCPTYYIQGLR 180
           +CIAKNQ TKGK+DAFK                                        GLR
Sbjct: 121 NCIAKNQVTKGKSDAFK----------------------------------------GLR 163

Query: 181 KHLLEELEQTFPDEVESYREIRAASAA 207
           KHLLEELEQ FPDEV+ YR+IRA+ AA
Sbjct: 181 KHLLEELEQAFPDEVDRYRDIRASYAA 163

HSP 2 Score: 38.5 bits (88), Expect = 1.3e-02
Identity = 17/23 (73.91%), Postives = 21/23 (91.30%), Query Frame = 0


Query: 317 EAKRIAQSQSMLPNGDMKVKMEV 340
           EAKR+AQ+QS+LPNGD KVK E+
Sbjct: 164 EAKRLAQTQSVLPNGDAKVKSEL 186

The following BLAST results are available for this feature:

BLAST of ClCG10G000810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7015809.1	8.8e-75	77.78	Mediator of RNA polymerase II transcription subunit 10b [Cucurbita argyrosperma ...	[more]
XP_022923485.1	2.6e-74	80.10	mediator of RNA polymerase II transcription subunit 10b-like [Cucurbita moschata...	[more]
XP_016900643.1	7.5e-74	79.33	PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X2 [C...	[more]
KAG6577769.1	7.5e-74	72.93	Mediator of RNA polymerase II transcription subunit 10b, partial [Cucurbita argy...	[more]
XP_008448559.1	1.7e-73	79.61	PREDICTED: mediator of RNA polymerase II transcription subunit 10b isoform X1 [C...	[more]

BLAST of ClCG10G000810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4HPA7	1.7e-52	59.35	Mediator of RNA polymerase II transcription subunit 10b OS=Arabidopsis thaliana ...	[more]
Q9FHZ2	6.2e-47	57.00	Mediator of RNA polymerase II transcription subunit 10a OS=Arabidopsis thaliana ...	[more]
Q16G71	7.2e-11	26.99	Mediator of RNA polymerase II transcription subunit 10 OS=Aedes aegypti OX=7159 ...	[more]
Q7Q5R5	1.6e-10	26.99	Mediator of RNA polymerase II transcription subunit 10 OS=Anopheles gambiae OX=7...	[more]
Q9CXU0	3.0e-09	28.66	Mediator of RNA polymerase II transcription subunit 10 OS=Mus musculus OX=10090 ...	[more]

BLAST of ClCG10G000810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLJ2	1.2e-74	80.10	Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita maxima OX=36...	[more]
A0A6J1E6X8	1.2e-74	80.10	Mediator of RNA polymerase II transcription subunit 10 OS=Cucurbita moschata OX=...	[more]
A0A1S4DXE0	3.6e-74	79.33	Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo OX=3656 G...	[more]
A0A1S3BJY3	8.1e-74	79.61	Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo OX=3656 G...	[more]
A0A5D3CJS3	8.1e-74	79.61	Mediator of RNA polymerase II transcription subunit 10 OS=Cucumis melo var. maku...	[more]

BLAST of ClCG10G000810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26665.2	1.2e-53	59.35	Mediator complex, subunit Med10	[more]
AT1G26665.1	1.6e-53	60.48	Mediator complex, subunit Med10	[more]
AT5G41910.1	4.4e-48	57.00	Mediator complex, subunit Med10	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019145	Mediator complex, subunit Med10	PFAM	PF09748	Med10	coord: 45..136 e-value: 6.3E-21 score: 74.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR13345	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10	coord: 1..137
None	No IPR available	PANTHER	PTHR13345:SF9	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10A-RELATED	coord: 175..210 coord: 1..137
None	No IPR available	PANTHER	PTHR13345	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10	coord: 175..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG10G000810.2	ClCG10G000810.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity