ClCG09G022780 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGGATCAGAAGAATGGAGAAAGCTCACAATTGTGTTGTTCATCTTCCTATCCCTTGCTTCTGGTACTAGATCTCATCCGATGCGATCCTCCTGGTTGTTTAATTTTGTGGTTTAATATCTTTATTATAATAATGAAAATAGAGAGTAATAGAAGTTGTGTTGTGTTGTTGCTTACAGGATGGATGGTGGCGGAGACGGAAGGAAGGGCTTGCTACCGGCCGAGCCCGTCGTTCAAGGGACGGTGTAGTTCGGATGAAGATTGTATTGGAGTTTGCGACGGATTTTGCAACCATGGTTCGTGCATCTGTACTGTGCCTTGCTGA ATGGCGGGATCAGAAGAATGGAGAAAGCTCACAATTGTGTTGTTCATCTTCCTATCCCTTGCTTCTGGATGGATGGTGGCGGAGACGGAAGGAAGGGCTTGCTACCGGCCGAGCCCGTCGTTCAAGGGACGGTGTAGTTCGGATGAAGATTGTATTGGAGTTTGCGACGGATTTTGCAACCATGGTTCGTGCATCTGTACTGTGCCTTGCTGA ATGGCGGGATCAGAAGAATGGAGAAAGCTCACAATTGTGTTGTTCATCTTCCTATCCCTTGCTTCTGGATGGATGGTGGCGGAGACGGAAGGAAGGGCTTGCTACCGGCCGAGCCCGTCGTTCAAGGGACGGTGTAGTTCGGATGAAGATTGTATTGGAGTTTGCGACGGATTTTGCAACCATGGTTCGTGCATCTGTACTGTGCCTTGCTGA MAGSEEWRKLTIVLFIFLSLASGWMVAETEGRACYRPSPSFKGRCSSDEDCIGVCDGFCNHGSCICTVPC Homology
BLAST of ClCG09G022780 vs. NCBI nr
Match: AHA50469.1 (defensin-like protein 3 [Citrullus lanatus]) HSP 1 Score: 155.6 bits (392), Expect = 1.6e-34 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of ClCG09G022780 vs. NCBI nr
Match: XP_031744629.1 (defensin-1-like [Cucumis sativus]) HSP 1 Score: 121.7 bits (304), Expect = 2.5e-24 Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 0
BLAST of ClCG09G022780 vs. NCBI nr
Match: KAA0062795.1 (defensin-like protein 3 [Cucumis melo var. makuwa] >TYJ96758.1 defensin-like protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 111.3 bits (277), Expect = 3.4e-21 Identity = 49/68 (72.06%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of ClCG09G022780 vs. NCBI nr
Match: XP_038887289.1 (defensin-like protein 2 [Benincasa hispida]) HSP 1 Score: 104.0 bits (258), Expect = 5.4e-19 Identity = 46/76 (60.53%), Postives = 60/76 (78.95%), Query Frame = 0
BLAST of ClCG09G022780 vs. NCBI nr
Match: KAA0062794.1 (defensin-like protein 3 [Cucumis melo var. makuwa] >TYJ96759.1 defensin-like protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 95.1 bits (235), Expect = 2.5e-16 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of ClCG09G022780 vs. ExPASy TrEMBL
Match: W5RQN1 (Defensin-like protein 3 OS=Citrullus lanatus OX=3654 GN=PDF2.3 PE=2 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 7.6e-35 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
BLAST of ClCG09G022780 vs. ExPASy TrEMBL
Match: A0A5D3BEY4 (Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00520 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.6e-21 Identity = 49/68 (72.06%), Postives = 55/68 (80.88%), Query Frame = 0
BLAST of ClCG09G022780 vs. ExPASy TrEMBL
Match: A0A5D3BCI9 (Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00530 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.2e-16 Identity = 42/76 (55.26%), Postives = 57/76 (75.00%), Query Frame = 0
BLAST of ClCG09G022780 vs. ExPASy TrEMBL
Match: A0A0A0K447 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G239060 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 9.6e-14 Identity = 41/77 (53.25%), Postives = 55/77 (71.43%), Query Frame = 0
BLAST of ClCG09G022780 vs. ExPASy TrEMBL
Match: A0A5A7V3H5 (Defensin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold986G00550 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.6e-13 Identity = 40/75 (53.33%), Postives = 49/75 (65.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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