ClCG09G022200 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG09G022200
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	Pentatricopeptide repeat-containing protein
Location	CG_Chr09: 39235981 .. 39241649 (+)
RNA-Seq Expression	ClCG09G022200
Synteny	ClCG09G022200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGTAGTTCTAAGAGATGCCTCTTATTGCTCCAAAGATGCATAAATATGAACCACCTAAAGCAAGCTCATGCACAGGTTCTTACATCTGGCCTCCATAACAACAACTTCGTGTTGAGTAGACTGTTGAATTTTTGTGCGGATCCTCGCCATGGCAGTCTTTCTCATGCATTCAAGCTCTTCCAACACATTCAACACCCCACCATTTGCATCTACAATACCATGATCAAAGCCCTTCTTCTTCGAGGTGAATTTCTCCACGCCATTCTTGTATTCTCTGCGATGTTAAGAAATGGGATCCACCCTGATACTTATACTCTTCCTTACGTTCTAAAAGCTTCTGCGAGGATGAAAAATTTTCATCTCGGAGAATCCGTTCATGCTTGTGTTGTAAAATTGGGTTTTGTACTGGATGCATTTGTGGGCAATTCTTTGCTTGTTATGTACTGCGCGTTCGGTAACATGAGAGTTGCAGGACAAGTGTTCGATGAAATGCCTGAGTTGAGTACTGTGTCATGGACGGTTATGATTTATGGGTTTGCAAAAATGGGTGACGTTGACACGGCAAGAAGGTTGTTTGACATGGCTACGGTTAAAGATAGAGGAATATGGGGCGCTATGATATCTGGGTATGTGCAGAACAATTGCTTTAAGGAGGGGCTTCACATGTTTCGTTTGATGCAGCTGACTGAATTAGAGCCTGATGAAGCCATAATCGTTACAATCCTTTGTGCTTGTGCTCATATGGGAGCTCTTGATACTGGGATTTGGATTCATAGGTATTTGGGTCAGCTGGGATTGCCATTAACTCTCAGAGTGAGCACTGGGCTGATAGATATGTATGCAAAATGTGGGCATTTGGATCTTGCGAAGCACCTGTTCGATGAAACGTCGCAGAGAGATAGTGTTTGTTGGAACGTAATGATTTCAGGAATGGCAATGAATGGAGATGGAGAAGGTGCACTCAAGCTCTTCATGGAGATGGAAAAAGCTAGAATGAAGCCGGATGACATTACTTTCATAGCTGTTTTGGCTGCTTGTAGCAACTCAGGTATGGTTGATGAAGGTCTAAGGATATGGAATAGTATGTCTACAATACACAAAATTGAGCCAAAGAGTGAACATTATGGGTGTGTAATCGACCTGCTGAGTCGAGTTGGGCGGTTCCAGGAAGCAGAGGGAGTGATCCAAAGGCTTCCAAAATCAGCCAGCCCTTCAGAGGAAGCAGTGGCTTGGAGGGCATTTTTAAGCGCTTGCTGCAAGCATGGGCAAATGCAGCAGGCTGAGGTTGCTGCTGAAAGGCTGTTCCAATTGGAAAGGCATAGTGGGGCTTATGTTTTGCTCTCAAATATGTATGCTTCTTTGGGGAAACATGGGGATGCTAAAAAAGTGAGGAAGATGATGAAGTTGAAAGGGGTTGAGAAGGTACCAGGTTGTAGCTCCATCAAAGTGAATGGGGTTGTCAATGAATTCATTGCTGGGGAAAAAACACACCTCCAAATTGGCAATATACATTTGGTTTTGGAAGAGTTGAATAATCAAATTGTTCAAGCTGATCTTGAAAGTATAGTATCAACAACTTACATTGGATATTGATACATGCAAGCGCACATGTCAAATTATAATACACTAAAATAGTTCGAAATTGATTATTGTCTTTTGGAGATCAAGCAATTAATTATTTTAACCATTGCAGAACTCGTTTCAATTTTTTTAGGGAACCGATTCATTCATACAAACTTAAACTAAATTAATTGCCTTAACCCTTAAATCCATTTAATGCCAACCGTAGATGAAATCTAGAGAGAGACACATCCTAGGGTACTAACTAAATCTCCTATAAAGATATAATAATCTCCTATAAAGATATAATGGAGTTGTTTAAAGTCCTAACTTGGTAGTATAAATGCTCCTGAGGTTGGGGTTACGCACACCACCAAATATTTGTATCGTTGATTCTGTGAATCAATGGCCCAATCCTTAAATCAATTTATTGTCAATCATAAATCTAAAAGCCTGAGACACATATATCCTCTCTTTCACTCAACATATTTTCATATATAGTTAATAAGCAATTAATTAACTACGCATGACACTAATACTTTTCATTATGAATCTCTATGGTTCGCTTATTACTCTTGTGCATATTTGAACAACAGCTAGCAAATTAGATCTAACTTAACATTCTTTCTCTCGGACAAGAAACTAGGCAAAAACAAATTAAATAATGGTTGAACGTTGAATCGTATTAAGGACAACCATTCCATAATGAAAAATGCATAAATCAATCTAAAGAAGAATCAAAACAATTGAATATTCGTAACTACATCAAAGCCCTAAGAATACAAAATAGTTTAATCGCATAATCACTTCGCTGATAGTGGATATTAGCAAGTGAAGAAATGAATCCAGATTAATCGAGGTAAGGAAAGAGAGAACTAGTCTTATACCTACAAAAACTTTGAAATGTAATGACGAAGTGATGGTAGGCATCCTTCATCATTGGCCTGATCAAATCCTAAAAAGTGTATTCCAAGTTTGATAGACTTAAGACACTATTTGGGTTTGGGTCGAGTCGTCCCAACTGATAGCATTTGAAATGTTATTTCACTCATCTTCATTGAAGCTCATTCTTAGGTTTAATGTGTTTTAATTGATGATTTTGTAGGTTTCGACCACCTAAGAGGTAGAATCAAATGTTAGGATGAAAATCAAGCTAAAATGGACCATTCGGAGTCCTGACGAAGTAAGCAAATCAAAGAGGAAGTGACATGATGATTTTACCCCTGTGGCCTAGCGTTGCGGCGTTGTGCAACACTATGCTCAGTGCCAAATTCCAGTAGCGGTGAAATTGTATATCGTCATGATGCTACCTAGATGGAGGAATAATGCAGCGCCTCAACACTATGACACGTGAGGAAAAAGGGCCTTAGTGCTGCGATGTTGTCCTATGGCATCGCGGCCCTATCGATTGGTTATAAGTGGAAATATTTTCCCTCATTTAGATTACCTAGCCACTAAGACTCCAATCCCTCTCGCTCCTCTCTTTGTTCTTTACTGTTTTTAGTCTATTTTCATACTTCGGGAATGATCTTAGCCATTGGGAACTTCTTCATTAATGTAACACCCCAAGTTTAGGGAGGGGACATGAATGTACCTAAATCACGTGCGAATGAGAGGAATCTTGAGGATATGAAAGTATGATCAAGAAAGTCTTAAAAGAATTGGAAGTTATTACCTATACTAACAAGGTGCAACTTCCTCTTTAGTGATTCAATTATAGGAACTTCAAAGTTAAGCATGCTTAATTTGGAGCAATCCTATGTTGGATGACTTCTTGGTAATTTTCTTAGGAAATATGTAAAGAATAGTCTTCACTCTTGAATTGGAAGTTACCAATTATATTGACAAGCAAGCTTAGCTTGGAACAATCTTATATTGGTGACCTATTGGGTAGGACAAAACATGTTAAAAAGATATGGGGCATTATGATTAATATAATGTGTCAAGGTAAGTTTATTCTAGCTTCCTATGTATGAATGGATCACCCTACATCTATTCTTTGCTAGGCTAGAGATTCATATTGGATATGTGACATTTAATCTCATGTGAATAATTGAATAGCACAAATGAAAACATGCTTGTGTGTTACACCATTGCATGTTTGATTTAATTCAGGAACAAAACCGGTTAGTAATTTAAGCTGATCCAAGTTCTAATCCTCCTACATTCTTAATCCAAATGTTTAGACATTTAGTTTTTATGGATATGAAAAGCACTAAAAAAAAAAGAAAAAGAAACTTTTTTAGGCTTAGATTTTTGGTTGATTTTATTGTTAAGTTACCTTCATTGGTTTGTTACGGTTGTATCTCCTGACAATTTCTCTAGTGTGTTCGTTGTTTGTTGTATTAAAATAATAATAATAATAATAATAATAATAATAATAAATAGAAAATAATGTCTTATTTGTAGCGGTCCATATTTGAACGAAAAAGAAGTGAAAACCTTCCCTATATTTGTGTTATAAAACTAAAGCATTTCATTCAAATCTTTTTTACAAATAGTGCAGGCTGCACCAAAACACAAGCCGATATATTCACTTGACATTCTATTACTACGAAGAACATGGTTTAAACTAGAGTTAATTCTAACAACCCAAACATGCTTGCTTCTATATACATCACAGCCTTTACCTAGTTCTAATATAAAGTTCATTAACCCAACATCCAGAGACAGATTTTGCCCGTATCAATGTACGTGTAAAAATAAACAAGATTTCTACGTCCCGTTGAAGACATCTTGTAAAGTTGAAATGATTTAAAGAAGATTAGCATAACCCCTGCACAAAGATAACATGTGAATGAGATATCATGCTCTAGGAATCAAATCCAGTGAAAGCAGTGCCATGGTCCCTATTCAACTTACTAATTAAACCAGAAATTCTGCATCAGAAACTTCAAGAACCTTGTGGAAACCTATCGGCTTGACGCCTTGCCGAAATGCATTTCCTTCGATGTACCTATGAACAACATGGCCTTGGAGAAAATGGCTACAAAATGATAATTGATATGAAGTTTGAATTTAGAATTCACTTACATCTCTTTCAAGAATGGGTGTTTATAGAAGGCATCGGGGATTCTTCCACTAAATTGGTTGTGATCCAAGTACCTAAAATTAAAACCTTCACAGTCGGTATAATAATAATTAAAAAAAAAAATCTAGAAAAACAAAACCCAATGATCATACAAAGAAGATGTTTGCGACCGATCGTAGAAAGAAAAGTGAGACATTGACATTGTAAAAGAAAAATAATTCATAATTGATGTGTATCACAATAAATGATACAAAAATCTTAGCGAATTAGAATTAGGAACCCTTTGGGTATGTAAAACCTTAATTCTCAAACACAAACTGTCTTGGCTAACTTGAAAGAGAATGCACAAAGGCCAAAATTCAATTTTTTCTTAGTTTGTTAAACAACCTAATGACAAGGCTTTAGATAGCCTTTCAATGAAAACCCTAATGCCACATCATAGTTCATAGTAAAATGACAAAAATATCCCTACTTAATATGTAATAAAAATAATAAAATTGGAAAAATACTAAAATTACATAAAAATTATTATATAAAATATAAATAATAATCTGAAGCTCTAGACGGTTCGTATCAATGATGATCATGGAAAAGATTATAACAGAAGAATTGTCTGTCTGTAATCTGTAGGATTCCTTTATTGACGTAAGGAAGCAAATCACTCTCCAGGATTTTCACAATTGAACAAGACTAATAGGTTTCACCCCTACTTGTAATTTTGGTAAACAATGCTTGAAGAACTCTATTCCTCATAATGGCAAGTTGTTACTTTTTAGAAAGGGAAAATTTTGCACTCAGTAACTTCTTTACAGTTACAAGCTGACAAATGTCAGATTCAACCAAGTAAAACTGAAGAAGGATCAAGAAAAGACTTACAGATAAGTCAACGTAGGTATATGAGCAACCCCAGGTGGTATTATCCCAGACATCTTATTGTAGGAGAGGTACCTAAAGCCAACAAACAAATGTTTAGATAAAACTGATGATATATACTTAAGGGGGAGAAAAAAGCGTTCATTTTTGGATCAACAAATTACAGAATTTCCAAGTTAGTCAGGTTTGCAAGCTGTGA

mRNA sequence

ATGTCAAGTAGTTCTAAGAGATGCCTCTTATTGCTCCAAAGATGCATAAATATGAACCACCTAAAGCAAGCTCATGCACAGGTTCTTACATCTGGCCTCCATAACAACAACTTCGTGTTGAGTAGACTGTTGAATTTTTGTGCGGATCCTCGCCATGGCAGTCTTTCTCATGCATTCAAGCTCTTCCAACACATTCAACACCCCACCATTTGCATCTACAATACCATGATCAAAGCCCTTCTTCTTCGAGGTGAATTTCTCCACGCCATTCTTGTATTCTCTGCGATGTTAAGAAATGGGATCCACCCTGATACTTATACTCTTCCTTACGTTCTAAAAGCTTCTGCGAGGATGAAAAATTTTCATCTCGGAGAATCCGTTCATGCTTGTGTTGTAAAATTGGGTTTTGTACTGGATGCATTTGTGGGCAATTCTTTGCTTGTTATGTACTGCGCGTTCGGTAACATGAGAGTTGCAGGACAAGTGTTCGATGAAATGCCTGAGTTGAGTACTGTGTCATGGACGGTTATGATTTATGGGTTTGCAAAAATGGGTGACGTTGACACGGCAAGAAGGTTGTTTGACATGGCTACGGTTAAAGATAGAGGAATATGGGGCGCTATGATATCTGGGTATGTGCAGAACAATTGCTTTAAGGAGGGGCTTCACATGTTTCGTTTGATGCAGCTGACTGAATTAGAGCCTGATGAAGCCATAATCGTTACAATCCTTTGTGCTTGTGCTCATATGGGAGCTCTTGATACTGGGATTTGGATTCATAGGTATTTGGGTCAGCTGGGATTGCCATTAACTCTCAGAGTGAGCACTGGGCTGATAGATATGTATGCAAAATGTGGGCATTTGGATCTTGCGAAGCACCTGTTCGATGAAACGTCGCAGAGAGATAGTGTTTGTTGGAACGTAATGATTTCAGGAATGGCAATGAATGGAGATGGAGAAGGTGCACTCAAGCTCTTCATGGAGATGGAAAAAGCTAGAATGAAGCCGGATGACATTACTTTCATAGCTGTTTTGGCTGCTTGTAGCAACTCAGGTATGGTTGATGAAGGTCTAAGGATATGGAATAGTATGTCTACAATACACAAAATTGAGCCAAAGAGTGAACATTATGGGTGTGTAATCGACCTGCTGAGTCGAGTTGGGCGGTTCCAGGAAGCAGAGGGAGTGATCCAAAGGCTTCCAAAATCAGCCAGCCCTTCAGAGGAAGCAGTGGCTTGGAGGGCATTTTTAAGCGCTTGCTGCAAGCATGGGCAAATGCAGCAGGCTGAGGTTGCTGCTGAAAGGCTGTTCCAATTGGAAAGGCATAGTGGGGCTTATGTTTTGCTCTCAAATATGTATGCTTCTTTGGGGAAACATGGGGATGCTAAAAAAGTGAGGAAGATGATGAAGTTGAAAGGGGTTGAGAAGAAAGGGAAAATTTTGCACTCAGTAACTTCTTTACAGTTACAAGCTGACAAATGTCAGATTCAACCAAGTAAAACTGAAGAAGGATCAAGAAAAGACTTACAGATAAGTCAACGTAGGTATATGAGCAACCCCAGGTGGTATTATCCCAGACATCTTATTGTAGGAGAGAATTTCCAAGTTAGTCAGGTTTGCAAGCTGTGA

Coding sequence (CDS)

ATGTCAAGTAGTTCTAAGAGATGCCTCTTATTGCTCCAAAGATGCATAAATATGAACCACCTAAAGCAAGCTCATGCACAGGTTCTTACATCTGGCCTCCATAACAACAACTTCGTGTTGAGTAGACTGTTGAATTTTTGTGCGGATCCTCGCCATGGCAGTCTTTCTCATGCATTCAAGCTCTTCCAACACATTCAACACCCCACCATTTGCATCTACAATACCATGATCAAAGCCCTTCTTCTTCGAGGTGAATTTCTCCACGCCATTCTTGTATTCTCTGCGATGTTAAGAAATGGGATCCACCCTGATACTTATACTCTTCCTTACGTTCTAAAAGCTTCTGCGAGGATGAAAAATTTTCATCTCGGAGAATCCGTTCATGCTTGTGTTGTAAAATTGGGTTTTGTACTGGATGCATTTGTGGGCAATTCTTTGCTTGTTATGTACTGCGCGTTCGGTAACATGAGAGTTGCAGGACAAGTGTTCGATGAAATGCCTGAGTTGAGTACTGTGTCATGGACGGTTATGATTTATGGGTTTGCAAAAATGGGTGACGTTGACACGGCAAGAAGGTTGTTTGACATGGCTACGGTTAAAGATAGAGGAATATGGGGCGCTATGATATCTGGGTATGTGCAGAACAATTGCTTTAAGGAGGGGCTTCACATGTTTCGTTTGATGCAGCTGACTGAATTAGAGCCTGATGAAGCCATAATCGTTACAATCCTTTGTGCTTGTGCTCATATGGGAGCTCTTGATACTGGGATTTGGATTCATAGGTATTTGGGTCAGCTGGGATTGCCATTAACTCTCAGAGTGAGCACTGGGCTGATAGATATGTATGCAAAATGTGGGCATTTGGATCTTGCGAAGCACCTGTTCGATGAAACGTCGCAGAGAGATAGTGTTTGTTGGAACGTAATGATTTCAGGAATGGCAATGAATGGAGATGGAGAAGGTGCACTCAAGCTCTTCATGGAGATGGAAAAAGCTAGAATGAAGCCGGATGACATTACTTTCATAGCTGTTTTGGCTGCTTGTAGCAACTCAGGTATGGTTGATGAAGGTCTAAGGATATGGAATAGTATGTCTACAATACACAAAATTGAGCCAAAGAGTGAACATTATGGGTGTGTAATCGACCTGCTGAGTCGAGTTGGGCGGTTCCAGGAAGCAGAGGGAGTGATCCAAAGGCTTCCAAAATCAGCCAGCCCTTCAGAGGAAGCAGTGGCTTGGAGGGCATTTTTAAGCGCTTGCTGCAAGCATGGGCAAATGCAGCAGGCTGAGGTTGCTGCTGAAAGGCTGTTCCAATTGGAAAGGCATAGTGGGGCTTATGTTTTGCTCTCAAATATGTATGCTTCTTTGGGGAAACATGGGGATGCTAAAAAAGTGAGGAAGATGATGAAGTTGAAAGGGGTTGAGAAGAAAGGGAAAATTTTGCACTCAGTAACTTCTTTACAGTTACAAGCTGACAAATGTCAGATTCAACCAAGTAAAACTGAAGAAGGATCAAGAAAAGACTTACAGATAAGTCAACGTAGGTATATGAGCAACCCCAGGTGGTATTATCCCAGACATCTTATTGTAGGAGAGAATTTCCAAGTTAGTCAGGTTTGCAAGCTGTGA

Protein sequence

MSSSSKRCLLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAEVAAERLFQLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEKKGKILHSVTSLQLQADKCQIQPSKTEEGSRKDLQISQRRYMSNPRWYYPRHLIVGENFQVSQVCKL

Homology

[Close]

BLAST of ClCG09G022200 vs. NCBI nr
Match: XP_038890502.1 (pentatricopeptide repeat-containing protein At2g20540-like [Benincasa hispida])

HSP 1 Score: 886.7 bits (2290), Expect = 9.9e-254
Identity = 434/476 (91.18%), Postives = 457/476 (96.01%), Query Frame = 0


Query: 1   MSSSSKRCLLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFK 60
           MS SSKRCLLLLQ+CINM  LKQAHAQVLTSGLHN+NFVLSRLLNFCADP +GSLSHAFK
Sbjct: 1   MSISSKRCLLLLQKCINMKQLKQAHAQVLTSGLHNSNFVLSRLLNFCADPHNGSLSHAFK 60

Query: 61  LFQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKN 120
           LFQHIQHP+ICI N MIKALLLRGEFL A++VFSAMLRNGIHPD YTLPYVLKASARM N
Sbjct: 61  LFQHIQHPSICICNIMIKALLLRGEFLDAVVVFSAMLRNGIHPDAYTLPYVLKASARMTN 120

Query: 121 FHLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYG 180
           FHLGESVHAC +KLGFVLD FVGNSLLVMYCAFGNMR AGQVFDEMPE+S+VSWTVMIYG
Sbjct: 121 FHLGESVHACSIKLGFVLDEFVGNSLLVMYCAFGNMRNAGQVFDEMPEMSSVSWTVMIYG 180

Query: 181 FAKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAII 240
           +AKMGDVDTAR LFDMAT KDRGIWGAMISGYVQNNCFKEGLHMFRLMQ TE+EPDEAII
Sbjct: 181 YAKMGDVDTARGLFDMATDKDRGIWGAMISGYVQNNCFKEGLHMFRLMQQTEIEPDEAII 240

Query: 241 VTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQ 300
           VTIL ACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHL+LAK+LFDE SQ
Sbjct: 241 VTILSACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLNLAKYLFDEMSQ 300

Query: 301 RDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRI 360
           RD++CWNVMISGMAM+GDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGM+DEGLRI
Sbjct: 301 RDTICWNVMISGMAMHGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMIDEGLRI 360

Query: 361 WNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSAC 420
           WN MSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPK+ASPSEEAVAWRAFLSAC
Sbjct: 361 WNKMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKTASPSEEAVAWRAFLSAC 420

Query: 421 CKHGQMQQAEVAAERLFQLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
           CKHG+ QQAEVAAERLFQLERHSGAYVLLSNMYA+LGKHG+AK+VR+MMKLKGVEK
Sbjct: 421 CKHGRTQQAEVAAERLFQLERHSGAYVLLSNMYAALGKHGEAKRVREMMKLKGVEK 476

[Close]

BLAST of ClCG09G022200 vs. NCBI nr
Match: XP_004143828.1 (pentatricopeptide repeat-containing protein At2g20540 [Cucumis sativus])

HSP 1 Score: 857.8 bits (2215), Expect = 4.9e-245
Identity = 420/476 (88.24%), Postives = 448/476 (94.12%), Query Frame = 0


Query: 1   MSSSSKRCLLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFK 60
           MSSSSKRCLLLL +CINMN LKQAHAQVL SGLHN+NFVLSRLLNFCA+ R+GSLSHAFK
Sbjct: 1   MSSSSKRCLLLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFK 60

Query: 61  LFQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKN 120
           LFQHIQHPTICI+NTMIKALLLRGEFL+AI VFSA+ RNGIHPDTYTLPYVLKASARM N
Sbjct: 61  LFQHIQHPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTN 120

Query: 121 FHLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYG 180
            HLGES+HAC +KLG  ++ FVGNSLLVMY +F NMR A QVFDEMPELS VSWTVMIYG
Sbjct: 121 IHLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYG 180

Query: 181 FAKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAII 240
           +A MGDVDTAR LFDMATVKD GIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAII
Sbjct: 181 YANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAII 240

Query: 241 VTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQ 300
           VTIL ACAHMGALDTGIWIHRYLG+LGLPLTLRVSTGLIDMYAKCGHLDLAK+LF+E SQ
Sbjct: 241 VTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQ 300

Query: 301 RDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRI 360
           RD+VCWN MISGMAM+GDGEGA+KLFMEMEKA +KPD+ITFIAVLAACSNSGMVDEG+RI
Sbjct: 301 RDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRI 360

Query: 361 WNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSAC 420
           WN MST+HKIEPKSEHYGCVIDLLSRVGRF+EAEGVIQRLPK+ASPSEEAVAWRAFLSAC
Sbjct: 361 WNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSAC 420

Query: 421 CKHGQMQQAEVAAERLFQLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
           CKHGQ QQAEVAAERLFQLERHSGAYVLLSNMYA+LGKH DAK+VR MMKLKGVEK
Sbjct: 421 CKHGQTQQAEVAAERLFQLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476

[Close]

BLAST of ClCG09G022200 vs. NCBI nr
Match: XP_016903441.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Cucumis melo])

HSP 1 Score: 854.0 bits (2205), Expect = 7.1e-244
Identity = 419/476 (88.03%), Postives = 446/476 (93.70%), Query Frame = 0


Query: 1   MSSSSKRCLLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFK 60
           MSSSSKRCLLLLQ+CINMNHLKQAHAQVLTSGLHN+NFVLS+LLNFCA+ R+GSLSHAFK
Sbjct: 1   MSSSSKRCLLLLQKCINMNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFK 60

Query: 61  LFQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKN 120
           LFQHIQHPTICI NTMIKALLLRGEFL+AI+VFSAM RNGIHPDTYTLPYVLKASARM N
Sbjct: 61  LFQHIQHPTICICNTMIKALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTN 120

Query: 121 FHLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYG 180
            HLGES+HAC +KLGF +D FVGNSLLVMY +F  M  A QVFDEMPELS VSWTVMIYG
Sbjct: 121 IHLGESIHACTIKLGFAVDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYG 180

Query: 181 FAKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAII 240
           +A MGDVDTAR LFDMATVKD GIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAII
Sbjct: 181 YANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAII 240

Query: 241 VTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQ 300
           VTIL ACAHMGALDTGIWIHRYLG+LGL LTLRV TGLIDMYAKCGHLDLAK+LF+E SQ
Sbjct: 241 VTILSACAHMGALDTGIWIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQ 300

Query: 301 RDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRI 360
           RD+VCWN MISGMAM+GDGEGA+KLFMEMEKA +KPD+ITFIAVLAACSNSGMVDEG+RI
Sbjct: 301 RDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRI 360

Query: 361 WNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSAC 420
           WN MSTIHKIEPKSEHYGCVIDLLSRVGRF+EAE VI RLPK+A+PSEEAVAWRAFLSAC
Sbjct: 361 WNRMSTIHKIEPKSEHYGCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSAC 420

Query: 421 CKHGQMQQAEVAAERLFQLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
           CKHGQ QQAEVAAERLFQLERHSGAYVLLSNMYA+LGKH DAK+VR MMKLKGVEK
Sbjct: 421 CKHGQTQQAEVAAERLFQLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476

[Close]

BLAST of ClCG09G022200 vs. NCBI nr
Match: KAA0040513.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK23450.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 852.4 bits (2201), Expect = 2.1e-243
Identity = 418/476 (87.82%), Postives = 445/476 (93.49%), Query Frame = 0


Query: 1   MSSSSKRCLLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFK 60
           MSSSSKRCLLLLQ+CINMNHLKQAHAQVLTSGLHN+NFVLS+LLNFCA+ R+GSLSHAFK
Sbjct: 1   MSSSSKRCLLLLQKCINMNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFK 60

Query: 61  LFQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKN 120
           LFQHIQHPTICI NTMIKALLLRGEFL+AI+VFSAM RNGIHPDTYTLPYVLKASARM N
Sbjct: 61  LFQHIQHPTICICNTMIKALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTN 120

Query: 121 FHLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYG 180
            HLGES+HAC +KLGF +D FVGNSLLVMY +F  M  A QVFDEMPELS VSWTVMIYG
Sbjct: 121 IHLGESIHACTIKLGFAVDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYG 180

Query: 181 FAKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAII 240
           +A MGDVDTAR LFDMATVKD GIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAII
Sbjct: 181 YANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAII 240

Query: 241 VTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQ 300
           VTIL ACAHMGA DTGIWIHRYLG+LGL LTLRV TGLIDMYAKCGHLDLAK+LF+E SQ
Sbjct: 241 VTILSACAHMGAFDTGIWIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQ 300

Query: 301 RDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRI 360
           RD+VCWN MISGMAM+GDGEGA+KLFMEMEKA +KPD+ITFIAVLAACSNSGMVDEG+RI
Sbjct: 301 RDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRI 360

Query: 361 WNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSAC 420
           WN MSTIHKIEPKSEHYGCVIDLLSRVGRF+EAE VI RLPK+A+PSEEAVAWRAFLSAC
Sbjct: 361 WNRMSTIHKIEPKSEHYGCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSAC 420

Query: 421 CKHGQMQQAEVAAERLFQLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
           CKHGQ QQAEVAAERLFQLERHSGAYVLLSNMYA+LGKH DAK+VR MMKLKGVEK
Sbjct: 421 CKHGQTQQAEVAAERLFQLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476

[Close]

BLAST of ClCG09G022200 vs. NCBI nr
Match: XP_022951910.1 (pentatricopeptide repeat-containing protein At2g20540-like [Cucurbita moschata])

HSP 1 Score: 826.2 bits (2133), Expect = 1.6e-235
Identity = 407/501 (81.24%), Postives = 447/501 (89.22%), Query Frame = 0


Query: 1   MSSSSKRCLLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFK 60
           MS+SS RCLLLLQ+C NM  LKQAHAQVLTSGL +N+F LSRLL+FCA+PRHGSLSHA K
Sbjct: 1   MSNSSTRCLLLLQKCRNMKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALK 60

Query: 61  LFQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKN 120
           L++HIQHPTICI NTMIKA LLRGEFL+AI+++SAM RN I PD+YT PYVLKA AR+K 
Sbjct: 61  LYRHIQHPTICICNTMIKAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKK 120

Query: 121 FHLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYG 180
           FHLGESVHAC VKLGFVLD FVGNSLLVMYCAFGNMR AGQVFDEMPELS VSWTVMIYG
Sbjct: 121 FHLGESVHACAVKLGFVLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYG 180

Query: 181 FAKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAII 240
           +AKMGDV+TAR LFD A +KDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAII
Sbjct: 181 YAKMGDVNTARGLFDRAPIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAII 240

Query: 241 VTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQ 300
           VTILCACAHMGALD GIWIHRYL  L LPLTLRVSTGL+DMYAKCGHLD+ +HLFDE  Q
Sbjct: 241 VTILCACAHMGALDIGIWIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQ 300

Query: 301 RDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRI 360
           RD++CWNVMISGMAM+GDGEGALKLF EMEKAR+KPDDITFIA+LAACSNSGM +EGL+I
Sbjct: 301 RDTICWNVMISGMAMHGDGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKI 360

Query: 361 WNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSAC 420
            N M TIHKIEPK+EHYGC+IDLLSR GRF+EAEGVIQRLP +A+ SEEAVAWRAFLSAC
Sbjct: 361 LNKMCTIHKIEPKAEHYGCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSAC 420

Query: 421 CKHGQMQQAEVAAERLFQLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK---- 480
           CKHG+MQQAE AAERLF+LERHSGAYVLLSNMYA+LGKHGDAK+VRKMMKLKGVEK    
Sbjct: 421 CKHGEMQQAEGAAERLFELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGC 480

Query: 481 KGKILHSVTSLQLQADKCQIQ 498
               L+ V +  +  DK  IQ
Sbjct: 481 SSIKLNGVVTEFIAGDKTHIQ 501

[Close]

BLAST of ClCG09G022200 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.3e-90
Identity = 196/573 (34.21%), Postives = 288/573 (50.26%), Query Frame = 0


Query: 9   LLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFC-ADPRHGSLSHAFKLFQHIQH 68
           L LL  C  +  L+  HAQ++  GLHN N+ LS+L+ FC   P    L +A  +F+ IQ 
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96

Query: 69  PTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESV 128
           P + I+NTM +   L  + + A+ ++  M+  G+ P++YT P+VLK+ A+ K F  G+ +
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156

Query: 129 HACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDV 188
           H  V+KLG  LD +V  SL+ MY   G +  A +VFD+ P    VS+T +I G+A  G +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216

Query: 189 DTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVT----- 248
           + A++LFD   VKD   W AMISGY +   +KE L +F+ M  T + PDE+ +VT     
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276

Query: 249 ------------------------------------------------------------ 308
                                                                       
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336

Query: 309 ------------------------------------ILCACAHMGALDTGIWIHRYLGQ- 368
                                               IL ACAH+GA+D G WIH Y+ + 
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396

Query: 369 -LGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNGDGEGALK 428
             G+     + T LIDMYAKCG ++ A  +F+    +    WN MI G AM+G  + +  
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 456

Query: 429 LFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHYGCVIDLL 477
           LF  M K  ++PDDITF+ +L+ACS+SGM+D G  I+ +M+  +K+ PK EHYGC+IDLL
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516

[Close]

BLAST of ClCG09G022200 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.0e-88
Identity = 168/467 (35.97%), Postives = 280/467 (59.96%), Query Frame = 0


Query: 12  LQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTIC 71
           LQR  + N  K+ +A ++  GL  ++F+++++++FC   +   + +A +LF  + +P + 
Sbjct: 17  LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVF 76

Query: 72  IYNTMIKALLLRGEFLHAILVFSAMLRNGIH-PDTYTLPYVLKASARMKNFHLGESVHAC 131
           +YN++I+A      +   I ++  +LR     PD +T P++ K+ A + + +LG+ VH  
Sbjct: 77  LYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGH 136

Query: 132 VVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTA 191
           + K G        N+L+ MY  F ++  A +VFDEM E   +SW  ++ G+A++G +  A
Sbjct: 137 LCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 196

Query: 192 RRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHM 251
           + LF +   K    W AMISGY    C+ E +  FR MQL  +EPDE  ++++L +CA +
Sbjct: 197 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQL 256

Query: 252 GALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMI 311
           G+L+ G WIH Y  + G      V   LI+MY+KCG +  A  LF +   +D + W+ MI
Sbjct: 257 GSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMI 316

Query: 312 SGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKI 371
           SG A +G+  GA++ F EM++A++KP+ ITF+ +L+ACS+ GM  EGLR ++ M   ++I
Sbjct: 317 SGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQI 376

Query: 372 EPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAE 431
           EPK EHYGC+ID+L+R G+ + A  + + +P       ++  W + LS+C   G +  A 
Sbjct: 377 EPKIEHYGCLIDVLARAGKLERAVEITKTMPM----KPDSKIWGSLLSSCRTPGNLDVAL 436

Query: 432 VAAERLFQLE-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
           VA + L +LE    G YVLL+N+YA LGK  D  ++RKM++ + ++K
Sbjct: 437 VAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK 477

[Close]

BLAST of ClCG09G022200 vs. ExPASy Swiss-Prot
Match: Q9FG16 (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 2.9e-86
Identity = 172/474 (36.29%), Postives = 276/474 (58.23%), Query Frame = 0


Query: 9   LLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPR-----HGSLSHAFKLFQ 68
           L LLQ C + + LK  H  +L + L ++ FV SRLL  C D          L +A+ +F 
Sbjct: 16  LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75

Query: 69  HIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHL 128
            IQ+P + ++N +I+      E   A   ++ ML++ I PD  T P+++KAS+ M+   +
Sbjct: 76  QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135

Query: 129 GESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAK 188
           GE  H+ +V+ GF  D +V NSL+ MY   G +  AG++F +M     VSWT M+ G+ K
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195

Query: 189 MGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTI 248
            G V+ AR +FD    ++   W  MI+GY +NNCF++ + +F  M+   +  +E ++V++
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255

Query: 249 LCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQRDS 308
           + +CAH+GAL+ G   + Y+ +  + + L + T L+DM+ +CG ++ A H+F+   + DS
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315

Query: 309 VCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNS 368
           + W+ +I G+A++G    A+  F +M      P D+TF AVL+ACS+ G+V++GL I+ +
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYEN 375

Query: 369 MSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKH 428
           M   H IEP+ EHYGC++D+L R G+  EAE  I  L     P+   +   A L AC  +
Sbjct: 376 MKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFI--LKMHVKPNAPILG--ALLGACKIY 435

Query: 429 GQMQQAEVAAERLFQLE-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
              + AE     L +++  HSG YVLLSN+YA  G+    + +R MMK K V+K
Sbjct: 436 KNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485

[Close]

BLAST of ClCG09G022200 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.4e-85
Identity = 175/467 (37.47%), Postives = 258/467 (55.25%), Query Frame = 0


Query: 12  LQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGS-LSHAFKLFQHIQHPTI 71
           LQRC     LKQ HA++L +GL  +++ +++ L+FC        L +A  +F     P  
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 72  CIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHAC 131
            ++N MI+      E   ++L++  ML +    + YT P +LKA + +  F     +HA 
Sbjct: 81  FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140

Query: 132 VVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTA 191
           + KLG+  D +  NSL+  Y   GN ++A  +FD +PE   VSW  +I G+ K G +D A
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200

Query: 192 RRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHM 251
             LF     K+   W  MISGYVQ +  KE L +F  MQ +++EPD   +   L ACA +
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260

Query: 252 GALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMI 311
           GAL+ G WIH YL +  + +   +   LIDMYAKCG ++ A  +F    ++    W  +I
Sbjct: 261 GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALI 320

Query: 312 SGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKI 371
           SG A +G G  A+  FMEM+K  +KP+ ITF AVL ACS +G+V+EG  I+ SM   + +
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380

Query: 372 EPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAE 431
           +P  EHYGC++DLL R G   EA+  IQ +P   +    AV W A L AC  H  ++  E
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN----AVIWGALLKACRIHKNIELGE 440

Query: 432 VAAERLFQLE-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
              E L  ++  H G YV  +N++A   K   A + R++MK +GV K
Sbjct: 441 EIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483

[Close]

BLAST of ClCG09G022200 vs. ExPASy Swiss-Prot
Match: P0C8Q7 (Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E105 PE=2 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.3e-83
Identity = 174/479 (36.33%), Postives = 284/479 (59.29%), Query Frame = 0


Query: 2   SSSSKRCLLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKL 61
           SSS     +L  +C +M+ L + H  ++T GL      +S+ L+F A    G + +A+K 
Sbjct: 5   SSSLVAKSILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKF 64

Query: 62  FQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNF 121
              +  P    +N +I+          +I V+  MLR G+ PD  T P+++K+S+R+ N 
Sbjct: 65  LSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNR 124

Query: 122 HLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGF 181
            LG S+H  VVK G   D F+ N+L+ MY +F +   A ++FDEMP  + V+W  ++  +
Sbjct: 125 KLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAY 184

Query: 182 AKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMF-RLMQLTELEPDEAII 241
           AK GDV +AR +FD  + +D   W +MI GYV+   + + L +F ++M++   + +E  +
Sbjct: 185 AKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTM 244

Query: 242 VTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETS- 301
           V+++CACAH+GAL+ G  +HRY+  + LPLT+ + T LIDMYAKCG +  A  +F   S 
Sbjct: 245 VSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASV 304

Query: 302 -QRDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGL 361
            + D++ WN +I G+A +G    +L+LF +M ++++ PD+ITF+ +LAACS+ G+V E  
Sbjct: 305 KETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAW 364

Query: 362 RIWNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLS 421
             + S+      EPKSEHY C++D+LSR G  ++A   I  +P   + S       A L+
Sbjct: 365 HFFKSLKE-SGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGS----MLGALLN 424

Query: 422 ACCKHGQMQQAEVAAERLFQLERHS-GAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
            C  HG ++ AE   ++L +L+ H+ G YV L+N+YA   +   A+ +R+ M+ KGV+K
Sbjct: 425 GCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKK 478

[Close]

BLAST of ClCG09G022200 vs. ExPASy TrEMBL
Match: A0A0A0KNK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G485180 PE=4 SV=1)

HSP 1 Score: 857.8 bits (2215), Expect = 2.4e-245
Identity = 420/476 (88.24%), Postives = 448/476 (94.12%), Query Frame = 0


Query: 1   MSSSSKRCLLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFK 60
           MSSSSKRCLLLL +CINMN LKQAHAQVL SGLHN+NFVLSRLLNFCA+ R+GSLSHAFK
Sbjct: 1   MSSSSKRCLLLLHKCINMNQLKQAHAQVLKSGLHNSNFVLSRLLNFCAESRNGSLSHAFK 60

Query: 61  LFQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKN 120
           LFQHIQHPTICI+NTMIKALLLRGEFL+AI VFSA+ RNGIHPDTYTLPYVLKASARM N
Sbjct: 61  LFQHIQHPTICIFNTMIKALLLRGEFLNAIAVFSAIFRNGIHPDTYTLPYVLKASARMTN 120

Query: 121 FHLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYG 180
            HLGES+HAC +KLG  ++ FVGNSLLVMY +F NMR A QVFDEMPELS VSWTVMIYG
Sbjct: 121 IHLGESIHACTIKLGSAVNEFVGNSLLVMYRSFDNMRSARQVFDEMPELSAVSWTVMIYG 180

Query: 181 FAKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAII 240
           +A MGDVDTAR LFDMATVKD GIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAII
Sbjct: 181 YANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAII 240

Query: 241 VTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQ 300
           VTIL ACAHMGALDTGIWIHRYLG+LGLPLTLRVSTGLIDMYAKCGHLDLAK+LF+E SQ
Sbjct: 241 VTILSACAHMGALDTGIWIHRYLGRLGLPLTLRVSTGLIDMYAKCGHLDLAKYLFNEMSQ 300

Query: 301 RDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRI 360
           RD+VCWN MISGMAM+GDGEGA+KLFMEMEKA +KPD+ITFIAVLAACSNSGMVDEG+RI
Sbjct: 301 RDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRI 360

Query: 361 WNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSAC 420
           WN MST+HKIEPKSEHYGCVIDLLSRVGRF+EAEGVIQRLPK+ASPSEEAVAWRAFLSAC
Sbjct: 361 WNRMSTVHKIEPKSEHYGCVIDLLSRVGRFEEAEGVIQRLPKTASPSEEAVAWRAFLSAC 420

Query: 421 CKHGQMQQAEVAAERLFQLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
           CKHGQ QQAEVAAERLFQLERHSGAYVLLSNMYA+LGKH DAK+VR MMKLKGVEK
Sbjct: 421 CKHGQTQQAEVAAERLFQLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476

[Close]

BLAST of ClCG09G022200 vs. ExPASy TrEMBL
Match: A0A1S4E5C9 (pentatricopeptide repeat-containing protein At2g20540-like OS=Cucumis melo OX=3656 GN=LOC103503327 PE=4 SV=1)

HSP 1 Score: 854.0 bits (2205), Expect = 3.5e-244
Identity = 419/476 (88.03%), Postives = 446/476 (93.70%), Query Frame = 0


Query: 1   MSSSSKRCLLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFK 60
           MSSSSKRCLLLLQ+CINMNHLKQAHAQVLTSGLHN+NFVLS+LLNFCA+ R+GSLSHAFK
Sbjct: 1   MSSSSKRCLLLLQKCINMNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFK 60

Query: 61  LFQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKN 120
           LFQHIQHPTICI NTMIKALLLRGEFL+AI+VFSAM RNGIHPDTYTLPYVLKASARM N
Sbjct: 61  LFQHIQHPTICICNTMIKALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTN 120

Query: 121 FHLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYG 180
            HLGES+HAC +KLGF +D FVGNSLLVMY +F  M  A QVFDEMPELS VSWTVMIYG
Sbjct: 121 IHLGESIHACTIKLGFAVDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYG 180

Query: 181 FAKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAII 240
           +A MGDVDTAR LFDMATVKD GIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAII
Sbjct: 181 YANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAII 240

Query: 241 VTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQ 300
           VTIL ACAHMGALDTGIWIHRYLG+LGL LTLRV TGLIDMYAKCGHLDLAK+LF+E SQ
Sbjct: 241 VTILSACAHMGALDTGIWIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQ 300

Query: 301 RDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRI 360
           RD+VCWN MISGMAM+GDGEGA+KLFMEMEKA +KPD+ITFIAVLAACSNSGMVDEG+RI
Sbjct: 301 RDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRI 360

Query: 361 WNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSAC 420
           WN MSTIHKIEPKSEHYGCVIDLLSRVGRF+EAE VI RLPK+A+PSEEAVAWRAFLSAC
Sbjct: 361 WNRMSTIHKIEPKSEHYGCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSAC 420

Query: 421 CKHGQMQQAEVAAERLFQLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
           CKHGQ QQAEVAAERLFQLERHSGAYVLLSNMYA+LGKH DAK+VR MMKLKGVEK
Sbjct: 421 CKHGQTQQAEVAAERLFQLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476

[Close]

BLAST of ClCG09G022200 vs. ExPASy TrEMBL
Match: A0A5D3DJ94 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00090 PE=4 SV=1)

HSP 1 Score: 852.4 bits (2201), Expect = 1.0e-243
Identity = 418/476 (87.82%), Postives = 445/476 (93.49%), Query Frame = 0


Query: 1   MSSSSKRCLLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFK 60
           MSSSSKRCLLLLQ+CINMNHLKQAHAQVLTSGLHN+NFVLS+LLNFCA+ R+GSLSHAFK
Sbjct: 1   MSSSSKRCLLLLQKCINMNHLKQAHAQVLTSGLHNSNFVLSKLLNFCAESRNGSLSHAFK 60

Query: 61  LFQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKN 120
           LFQHIQHPTICI NTMIKALLLRGEFL+AI+VFSAM RNGIHPDTYTLPYVLKASARM N
Sbjct: 61  LFQHIQHPTICICNTMIKALLLRGEFLNAIVVFSAMFRNGIHPDTYTLPYVLKASARMTN 120

Query: 121 FHLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYG 180
            HLGES+HAC +KLGF +D FVGNSLLVMY +F  M  A QVFDEMPELS VSWTVMIYG
Sbjct: 121 IHLGESIHACTIKLGFAVDEFVGNSLLVMYRSFDKMTSARQVFDEMPELSAVSWTVMIYG 180

Query: 181 FAKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAII 240
           +A MGDVDTAR LFDMATVKD GIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAII
Sbjct: 181 YANMGDVDTARELFDMATVKDTGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAII 240

Query: 241 VTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQ 300
           VTIL ACAHMGA DTGIWIHRYLG+LGL LTLRV TGLIDMYAKCGHLDLAK+LF+E SQ
Sbjct: 241 VTILSACAHMGAFDTGIWIHRYLGRLGLSLTLRVRTGLIDMYAKCGHLDLAKYLFNEMSQ 300

Query: 301 RDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRI 360
           RD+VCWN MISGMAM+GDGEGA+KLFMEMEKA +KPD+ITFIAVLAACSNSGMVDEG+RI
Sbjct: 301 RDNVCWNAMISGMAMDGDGEGAIKLFMEMEKAGIKPDNITFIAVLAACSNSGMVDEGIRI 360

Query: 361 WNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSAC 420
           WN MSTIHKIEPKSEHYGCVIDLLSRVGRF+EAE VI RLPK+A+PSEEAVAWRAFLSAC
Sbjct: 361 WNRMSTIHKIEPKSEHYGCVIDLLSRVGRFEEAEAVILRLPKTANPSEEAVAWRAFLSAC 420

Query: 421 CKHGQMQQAEVAAERLFQLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
           CKHGQ QQAEVAAERLFQLERHSGAYVLLSNMYA+LGKH DAK+VR MMKLKGVEK
Sbjct: 421 CKHGQTQQAEVAAERLFQLERHSGAYVLLSNMYAALGKHEDAKRVRNMMKLKGVEK 476

[Close]

BLAST of ClCG09G022200 vs. ExPASy TrEMBL
Match: A0A6J1GK82 (pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita moschata OX=3662 GN=LOC111454648 PE=4 SV=1)

HSP 1 Score: 826.2 bits (2133), Expect = 7.7e-236
Identity = 407/501 (81.24%), Postives = 447/501 (89.22%), Query Frame = 0


Query: 1   MSSSSKRCLLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFK 60
           MS+SS RCLLLLQ+C NM  LKQAHAQVLTSGL +N+F LSRLL+FCA+PRHGSLSHA K
Sbjct: 1   MSNSSTRCLLLLQKCRNMKQLKQAHAQVLTSGLGSNSFALSRLLDFCAEPRHGSLSHALK 60

Query: 61  LFQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKN 120
           L++HIQHPTICI NTMIKA LLRGEFL+AI+++SAM RN I PD+YT PYVLKA AR+K 
Sbjct: 61  LYRHIQHPTICICNTMIKAFLLRGEFLNAIVIYSAMRRNEIAPDSYTHPYVLKACARIKK 120

Query: 121 FHLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYG 180
           FHLGESVHAC VKLGFVLD FVGNSLLVMYCAFGNMR AGQVFDEMPELS VSWTVMIYG
Sbjct: 121 FHLGESVHACAVKLGFVLDVFVGNSLLVMYCAFGNMRDAGQVFDEMPELSAVSWTVMIYG 180

Query: 181 FAKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAII 240
           +AKMGDV+TAR LFD A +KDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAII
Sbjct: 181 YAKMGDVNTARGLFDRAPIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAII 240

Query: 241 VTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQ 300
           VTILCACAHMGALD GIWIHRYL  L LPLTLRVSTGL+DMYAKCGHLD+ +HLFDE  Q
Sbjct: 241 VTILCACAHMGALDIGIWIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRHLFDEMPQ 300

Query: 301 RDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRI 360
           RD++CWNVMISGMAM+GDGEGALKLF EMEKAR+KPDDITFIA+LAACSNSGM +EGL+I
Sbjct: 301 RDTICWNVMISGMAMHGDGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKI 360

Query: 361 WNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSAC 420
            N M TIHKIEPK+EHYGC+IDLLSR GRF+EAEGVIQRLP +A+ SEEAVAWRAFLSAC
Sbjct: 361 LNKMCTIHKIEPKAEHYGCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSAC 420

Query: 421 CKHGQMQQAEVAAERLFQLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK---- 480
           CKHG+MQQAE AAERLF+LERHSGAYVLLSNMYA+LGKHGDAK+VRKMMKLKGVEK    
Sbjct: 421 CKHGEMQQAEGAAERLFELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEKVPGC 480

Query: 481 KGKILHSVTSLQLQADKCQIQ 498
               L+ V +  +  DK  IQ
Sbjct: 481 SSIKLNGVVTEFIAGDKTHIQ 501

[Close]

BLAST of ClCG09G022200 vs. ExPASy TrEMBL
Match: A0A6J1I746 (pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita maxima OX=3661 GN=LOC111471855 PE=4 SV=1)

HSP 1 Score: 824.7 bits (2129), Expect = 2.2e-235
Identity = 399/476 (83.82%), Postives = 439/476 (92.23%), Query Frame = 0


Query: 1   MSSSSKRCLLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFK 60
           MS+SS RCL LLQ+C NM  LKQAHAQVLTSGL +N+F LSR+L+FCA+PRHGSLSHA K
Sbjct: 1   MSNSSTRCLSLLQKCRNMKQLKQAHAQVLTSGLGSNSFALSRVLDFCAEPRHGSLSHALK 60

Query: 61  LFQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKN 120
           LFQHIQHPTICI NTMIKA LLRGEFL+AI+++SAM RNGI PD+YT PYVLKA AR+K 
Sbjct: 61  LFQHIQHPTICICNTMIKAFLLRGEFLNAIVMYSAMRRNGIAPDSYTHPYVLKACARIKK 120

Query: 121 FHLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYG 180
           FHLGESVHAC VKLGFV+D FVGNSLLVMYCAFGNM+ AGQ+FDEMPELS VSWTVMIYG
Sbjct: 121 FHLGESVHACAVKLGFVMDVFVGNSLLVMYCAFGNMKDAGQMFDEMPELSAVSWTVMIYG 180

Query: 181 FAKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAII 240
           +AKMGDV+TAR LFD A +KDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTE+EPDEAII
Sbjct: 181 YAKMGDVNTARGLFDRAPIKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTEVEPDEAII 240

Query: 241 VTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQ 300
           VTILCACAHMGALD GIWIHRYL  L LPLTLRVSTGL+DMYAKCGHLD+ ++LFDE  Q
Sbjct: 241 VTILCACAHMGALDVGIWIHRYLSHLELPLTLRVSTGLMDMYAKCGHLDMTRYLFDEMPQ 300

Query: 301 RDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRI 360
           RD++CWNVMISGMAM+GDGEGALKLF EMEKAR+KPDDITFIA+LAACSNSGM +EGL+I
Sbjct: 301 RDTICWNVMISGMAMHGDGEGALKLFKEMEKARIKPDDITFIAILAACSNSGMANEGLKI 360

Query: 361 WNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSAC 420
            N MSTIHKIEPK+EHYGC+IDLLSR GRF+EAEGVIQRLP +A+ SEEAVAWRAFLSAC
Sbjct: 361 LNKMSTIHKIEPKAEHYGCIIDLLSRAGRFEEAEGVIQRLPNTATASEEAVAWRAFLSAC 420

Query: 421 CKHGQMQQAEVAAERLFQLERHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
           CKHG+MQQAE AAERLF+LERHSGAYVLLSNMYA+LGKHGDAK+VRKMMKLKGVEK
Sbjct: 421 CKHGEMQQAEGAAERLFELERHSGAYVLLSNMYAALGKHGDAKRVRKMMKLKGVEK 476

[Close]

BLAST of ClCG09G022200 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 334.0 bits (855), Expect = 2.3e-91
Identity = 196/573 (34.21%), Postives = 288/573 (50.26%), Query Frame = 0


Query: 9   LLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFC-ADPRHGSLSHAFKLFQHIQH 68
           L LL  C  +  L+  HAQ++  GLHN N+ LS+L+ FC   P    L +A  +F+ IQ 
Sbjct: 37  LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96

Query: 69  PTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESV 128
           P + I+NTM +   L  + + A+ ++  M+  G+ P++YT P+VLK+ A+ K F  G+ +
Sbjct: 97  PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156

Query: 129 HACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDV 188
           H  V+KLG  LD +V  SL+ MY   G +  A +VFD+ P    VS+T +I G+A  G +
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216

Query: 189 DTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVT----- 248
           + A++LFD   VKD   W AMISGY +   +KE L +F+ M  T + PDE+ +VT     
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276

Query: 249 ------------------------------------------------------------ 308
                                                                       
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336

Query: 309 ------------------------------------ILCACAHMGALDTGIWIHRYLGQ- 368
                                               IL ACAH+GA+D G WIH Y+ + 
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396

Query: 369 -LGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMISGMAMNGDGEGALK 428
             G+     + T LIDMYAKCG ++ A  +F+    +    WN MI G AM+G  + +  
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 456

Query: 429 LFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKIEPKSEHYGCVIDLL 477
           LF  M K  ++PDDITF+ +L+ACS+SGM+D G  I+ +M+  +K+ PK EHYGC+IDLL
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516

[Close]

BLAST of ClCG09G022200 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 328.9 bits (842), Expect = 7.5e-90
Identity = 168/467 (35.97%), Postives = 280/467 (59.96%), Query Frame = 0


Query: 12  LQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKLFQHIQHPTIC 71
           LQR  + N  K+ +A ++  GL  ++F+++++++FC   +   + +A +LF  + +P + 
Sbjct: 17  LQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFC--DKIEDMDYATRLFNQVSNPNVF 76

Query: 72  IYNTMIKALLLRGEFLHAILVFSAMLRNGIH-PDTYTLPYVLKASARMKNFHLGESVHAC 131
           +YN++I+A      +   I ++  +LR     PD +T P++ K+ A + + +LG+ VH  
Sbjct: 77  LYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGH 136

Query: 132 VVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTA 191
           + K G        N+L+ MY  F ++  A +VFDEM E   +SW  ++ G+A++G +  A
Sbjct: 137 LCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKA 196

Query: 192 RRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHM 251
           + LF +   K    W AMISGY    C+ E +  FR MQL  +EPDE  ++++L +CA +
Sbjct: 197 KGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQL 256

Query: 252 GALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMI 311
           G+L+ G WIH Y  + G      V   LI+MY+KCG +  A  LF +   +D + W+ MI
Sbjct: 257 GSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMI 316

Query: 312 SGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKI 371
           SG A +G+  GA++ F EM++A++KP+ ITF+ +L+ACS+ GM  EGLR ++ M   ++I
Sbjct: 317 SGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQI 376

Query: 372 EPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAE 431
           EPK EHYGC+ID+L+R G+ + A  + + +P       ++  W + LS+C   G +  A 
Sbjct: 377 EPKIEHYGCLIDVLARAGKLERAVEITKTMPM----KPDSKIWGSLLSSCRTPGNLDVAL 436

Query: 432 VAAERLFQLE-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
           VA + L +LE    G YVLL+N+YA LGK  D  ++RKM++ + ++K
Sbjct: 437 VAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKK 477

[Close]

BLAST of ClCG09G022200 vs. TAIR 10
Match: AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 320.9 bits (821), Expect = 2.0e-87
Identity = 172/474 (36.29%), Postives = 276/474 (58.23%), Query Frame = 0


Query: 9   LLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPR-----HGSLSHAFKLFQ 68
           L LLQ C + + LK  H  +L + L ++ FV SRLL  C D          L +A+ +F 
Sbjct: 16  LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75

Query: 69  HIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHL 128
            IQ+P + ++N +I+      E   A   ++ ML++ I PD  T P+++KAS+ M+   +
Sbjct: 76  QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135

Query: 129 GESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAK 188
           GE  H+ +V+ GF  D +V NSL+ MY   G +  AG++F +M     VSWT M+ G+ K
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195

Query: 189 MGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTI 248
            G V+ AR +FD    ++   W  MI+GY +NNCF++ + +F  M+   +  +E ++V++
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255

Query: 249 LCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQRDS 308
           + +CAH+GAL+ G   + Y+ +  + + L + T L+DM+ +CG ++ A H+F+   + DS
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDS 315

Query: 309 VCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNS 368
           + W+ +I G+A++G    A+  F +M      P D+TF AVL+ACS+ G+V++GL I+ +
Sbjct: 316 LSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYEN 375

Query: 369 MSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKH 428
           M   H IEP+ EHYGC++D+L R G+  EAE  I  L     P+   +   A L AC  +
Sbjct: 376 MKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFI--LKMHVKPNAPILG--ALLGACKIY 435

Query: 429 GQMQQAEVAAERLFQLE-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
              + AE     L +++  HSG YVLLSN+YA  G+    + +R MMK K V+K
Sbjct: 436 KNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 485

[Close]

BLAST of ClCG09G022200 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 318.5 bits (815), Expect = 1.0e-86
Identity = 175/467 (37.47%), Postives = 258/467 (55.25%), Query Frame = 0


Query: 12  LQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGS-LSHAFKLFQHIQHPTI 71
           LQRC     LKQ HA++L +GL  +++ +++ L+FC        L +A  +F     P  
Sbjct: 21  LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDT 80

Query: 72  CIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNFHLGESVHAC 131
            ++N MI+      E   ++L++  ML +    + YT P +LKA + +  F     +HA 
Sbjct: 81  FLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQ 140

Query: 132 VVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGFAKMGDVDTA 191
           + KLG+  D +  NSL+  Y   GN ++A  +FD +PE   VSW  +I G+ K G +D A
Sbjct: 141 ITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIA 200

Query: 192 RRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMFRLMQLTELEPDEAIIVTILCACAHM 251
             LF     K+   W  MISGYVQ +  KE L +F  MQ +++EPD   +   L ACA +
Sbjct: 201 LTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQL 260

Query: 252 GALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETSQRDSVCWNVMI 311
           GAL+ G WIH YL +  + +   +   LIDMYAKCG ++ A  +F    ++    W  +I
Sbjct: 261 GALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALI 320

Query: 312 SGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGLRIWNSMSTIHKI 371
           SG A +G G  A+  FMEM+K  +KP+ ITF AVL ACS +G+V+EG  I+ SM   + +
Sbjct: 321 SGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNL 380

Query: 372 EPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLSACCKHGQMQQAE 431
           +P  EHYGC++DLL R G   EA+  IQ +P   +    AV W A L AC  H  ++  E
Sbjct: 381 KPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN----AVIWGALLKACRIHKNIELGE 440

Query: 432 VAAERLFQLE-RHSGAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
              E L  ++  H G YV  +N++A   K   A + R++MK +GV K
Sbjct: 441 EIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAK 483

[Close]

BLAST of ClCG09G022200 vs. TAIR 10
Match: AT5G08305.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 312.0 bits (798), Expect = 9.4e-85
Identity = 174/479 (36.33%), Postives = 284/479 (59.29%), Query Frame = 0


Query: 2   SSSSKRCLLLLQRCINMNHLKQAHAQVLTSGLHNNNFVLSRLLNFCADPRHGSLSHAFKL 61
           SSS     +L  +C +M+ L + H  ++T GL      +S+ L+F A    G + +A+K 
Sbjct: 5   SSSLVAKSILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKF 64

Query: 62  FQHIQHPTICIYNTMIKALLLRGEFLHAILVFSAMLRNGIHPDTYTLPYVLKASARMKNF 121
              +  P    +N +I+          +I V+  MLR G+ PD  T P+++K+S+R+ N 
Sbjct: 65  LSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNR 124

Query: 122 HLGESVHACVVKLGFVLDAFVGNSLLVMYCAFGNMRVAGQVFDEMPELSTVSWTVMIYGF 181
            LG S+H  VVK G   D F+ N+L+ MY +F +   A ++FDEMP  + V+W  ++  +
Sbjct: 125 KLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAY 184

Query: 182 AKMGDVDTARRLFDMATVKDRGIWGAMISGYVQNNCFKEGLHMF-RLMQLTELEPDEAII 241
           AK GDV +AR +FD  + +D   W +MI GYV+   + + L +F ++M++   + +E  +
Sbjct: 185 AKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTM 244

Query: 242 VTILCACAHMGALDTGIWIHRYLGQLGLPLTLRVSTGLIDMYAKCGHLDLAKHLFDETS- 301
           V+++CACAH+GAL+ G  +HRY+  + LPLT+ + T LIDMYAKCG +  A  +F   S 
Sbjct: 245 VSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASV 304

Query: 302 -QRDSVCWNVMISGMAMNGDGEGALKLFMEMEKARMKPDDITFIAVLAACSNSGMVDEGL 361
            + D++ WN +I G+A +G    +L+LF +M ++++ PD+ITF+ +LAACS+ G+V E  
Sbjct: 305 KETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAW 364

Query: 362 RIWNSMSTIHKIEPKSEHYGCVIDLLSRVGRFQEAEGVIQRLPKSASPSEEAVAWRAFLS 421
             + S+      EPKSEHY C++D+LSR G  ++A   I  +P   + S       A L+
Sbjct: 365 HFFKSLKE-SGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGS----MLGALLN 424

Query: 422 ACCKHGQMQQAEVAAERLFQLERHS-GAYVLLSNMYASLGKHGDAKKVRKMMKLKGVEK 477
            C  HG ++ AE   ++L +L+ H+ G YV L+N+YA   +   A+ +R+ M+ KGV+K
Sbjct: 425 GCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKK 478

The following BLAST results are available for this feature:

BLAST of ClCG09G022200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890502.1	9.9e-254	91.18	pentatricopeptide repeat-containing protein At2g20540-like [Benincasa hispida]	[more]
XP_004143828.1	4.9e-245	88.24	pentatricopeptide repeat-containing protein At2g20540 [Cucumis sativus]	[more]
XP_016903441.1	7.1e-244	88.03	PREDICTED: pentatricopeptide repeat-containing protein At2g20540-like [Cucumis m...	[more]
KAA0040513.1	2.1e-243	87.82	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK23450...	[more]
XP_022951910.1	1.6e-235	81.24	pentatricopeptide repeat-containing protein At2g20540-like [Cucurbita moschata]	[more]

BLAST of ClCG09G022200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LN01	3.3e-90	34.21	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q9SIL5	1.0e-88	35.97	Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX...	[more]
Q9FG16	2.9e-86	36.29	Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	1.4e-85	37.47	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
P0C8Q7	1.3e-83	36.33	Pentatricopeptide repeat-containing protein At5g08305 OS=Arabidopsis thaliana OX...	[more]

BLAST of ClCG09G022200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNK8	2.4e-245	88.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G485180 PE=4 SV=1	[more]
A0A1S4E5C9	3.5e-244	88.03	pentatricopeptide repeat-containing protein At2g20540-like OS=Cucumis melo OX=36...	[more]
A0A5D3DJ94	1.0e-243	87.82	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1GK82	7.7e-236	81.24	pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita moschata...	[more]
A0A6J1I746	2.2e-235	83.82	pentatricopeptide repeat-containing protein At2g20540-like OS=Cucurbita maxima O...	[more]

BLAST of ClCG09G022200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08070.1	2.3e-91	34.21	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20540.1	7.5e-90	35.97	mitochondrial editing factor 21	[more]
AT5G06540.1	2.0e-87	36.29	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	1.0e-86	37.47	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G08305.1	9.4e-85	36.33	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 205..237 e-value: 3.5E-6 score: 24.8 coord: 72..105 e-value: 5.8E-7 score: 27.3 coord: 304..337 e-value: 9.7E-8 score: 29.7 coord: 172..196 e-value: 1.2E-4 score: 20.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 302..349 e-value: 2.8E-12 score: 46.7 coord: 68..115 e-value: 1.3E-8 score: 34.9
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 144..168 e-value: 0.11 score: 12.8 coord: 204..229 e-value: 4.3E-4 score: 20.3 coord: 276..297 e-value: 0.088 score: 13.1 coord: 446..474 e-value: 0.51 score: 10.7 coord: 411..430 e-value: 0.32 score: 11.3 coord: 376..401 e-value: 0.27 score: 11.6 coord: 172..196 e-value: 1.7E-4 score: 21.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 201..235 score: 9.45966
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 69..103 score: 9.832344
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 302..336 score: 11.597113
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 4..157 e-value: 4.4E-17 score: 64.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 277..518 e-value: 2.2E-40 score: 140.9 coord: 159..266 e-value: 1.6E-18 score: 69.1
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 2..477
None	No IPR available	PANTHER	PTHR47928:SF89	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 2..477

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G022200.2	ClCG09G022200.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding