ClCG09G021090 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG09G021090
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionPI-PLC Y-box domain-containing protein
LocationCG_Chr09: 38134954 .. 38137156 (-)
RNA-Seq ExpressionClCG09G021090
SyntenyClCG09G021090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCTTCAAAATGTGGTGCAATGGGTAGTGGTGGATTTTGGAAGTTAGCTGTAAGAATATATCTAATAAAGAGTGGGCCAAATTTTGTTCACTCATTGGTCAATGGACTCGTGGTGTTACAAACAACCTTCCAAACCCTACATTCCAACAAGGTATCATTGAGTTCTCTTTTCAATCCAACTATTCTACGACAAAACCTCCCCTTTTCTTTTCTATGCAATTTGATGCTCACATTTATGCCTTTTCCTTTATTTAAATTCCTTCCTTTGTGATCTTTAAATCATTTTAAGATTAAGTATAACAGTATATACTATGCTAATCTTTAAGTTGTTCAAAGATTAAGTATAACGGTATACTATGTTCTTTAAGTCCTTACAAGATTAAGTATAACAGTATACCATGTTCTTTAAGTCATTATAAGATTATATAATGGTATACTATTCTCTTTATGTTGTTATAAGATTAAGTATAATAGTATACTATGCTCTTTCAGTTGGTATATGAGTGATTATAAGATTAAGTATACCGGTGTATACTATGCTCTTTAAGTCATTATAAGTTTAAGTATAATAGTACACTATGGTATTTAAGTTGGTACAAAATGGTTATAAGATTAAGTATAACAGTATACTATGCTCTTTAAGTCGGTAAGAGTGGTTATAATTAAGCATAACAATATATACTATGCTCTTTAAGTCATACAAATAGTTGTTATAAGATTAAGTATAACAGTGTACTATGCTTTTTAAGTCCTTATAAGAGTTGTTATAAGGTTAAGTATAACAGTATATACAATTGCTCTTTAAGTCATTATAAGATTAAGTGTAACAGTATACTATTCCTTTTAAATCGTTCAAAGAGTTGTAAGACTAAGGTTATCTCTCTTAGTTCACCATATGGAAATGATGCTAACCCATGAAAGTAGTAGGGTTCTTTTTTGAAAGAAAAGGAAAAGATCATTAAGATATTGGAAGACATTCTATTTAGTCACTCTTGTCCATGTCTATAGTCCAATCTAGCTTCTGATCTTAATTTAATCTCTAAACTTTGTATAAAAGAAGAATATTTTAACCAGTAAAATGAAAATCATTTCGATCTACAACGTGGACAGATATCTATTTGTCGTCTAGATGAATGAAATGCCAAGTTTCTAGAATGAAATTTTAACCAAATCAAATGTAACTGGAAATGATGGTTTGGAATGAAAGAAAAGAAAAAGAAAAACACCAGCAAAGGAAAAGAGAGAAGAGAGAAGAACACCAGCAAAGGAACCCCAAAAGGATACATTTCCACCATTGTGTATTGCACATGTTGAGTTGTAATTCAAAAGAAAAGAGAAAAGAGGAGAGAGTGAGAGGTACATTCAAAGCAAAATCCCATTGAAAAGGCACAGCGCAGCCCCTCAGACAAACAGACTAGAAATCATAATCCAATAATTGAACTCAACATACGCCTACAAAAGCTACATTCCTGCCTCTCAATCCCTCTCTCTCCTTGGAAGTCTCTGCCTTCTTCACATCCAACAACCAAAAACTCAGCTTTGCTCCTGGCTAGTTCTACTTGGCCTTTCCATCTTGGCACCTGCTTCTTCCCTTTATTTTCGCGATTCAAAATCTAATCGAAAGCTTAAACTTAACTAATACATCTATTAATCTTCTCAAAATATCACCTACCCATGTCCTATAAATAGAGATACAAATATTCAAACATTCCTCAAAGAGCTACCTGACAGGTCTTGTTGGCCAAGCGTTGGAGATTGACTTTTTTTTTTCCTTCTTTTTTTCCCTTTTTTTTTTTTTTTTTTTTCTTTCTTTTCTTTTGACAATGAGTAGTGAAAACTGTAATGCCAGAGCAATGAACTCCTCCATCGCCTTGCTGCAGGAAAGATTTAGACAATTGCAGAAAGCTAAGGAGTTGAGAGAGCAGAAAGAATTTCGAAGGCTGTCGTCTGAGTCGATACAGGCCAATACAGCAGTGTTCTCTGAGCAAACTGGTTTATATTTCCATTCTGAACTAGTTCTTCCACCTATGTCACCACTCCAAGGCTCTTCATACCTTCAGCCAATCTTGGAAAGCAGAAAATCTCATCTTCAATTCACAGATAATCTTACTTTATCAGACATGGGGTCAAGAGAAACAGTCATGCACAGAACAAACTGTGTTGATGATTCAAATATTGACACCTCTCTTCATCTGTGA

mRNA sequence

ATGAATGCTTCAAAATGTGGTGCAATGGGTAGTGGTGGATTTTGGAAGTTAGCTGTAAGAATATATCTAATAAAGAGTGGGCCAAATTTTGTTCACTCATTGGTCAATGGACTCGTGGTGTTACAAACAACCTTCCAAACCCTACATTCCAACAAGGAAAGATTTAGACAATTGCAGAAAGCTAAGGAGTTGAGAGAGCAGAAAGAATTTCGAAGGCTGTCGTCTGAGTCGATACAGGCCAATACAGCAGTGTTCTCTGAGCAAACTGGTTTATATTTCCATTCTGAACTAGTTCTTCCACCTATGTCACCACTCCAAGGCTCTTCATACCTTCAGCCAATCTTGGAAAGCAGAAAATCTCATCTTCAATTCACAGATAATCTTACTTTATCAGACATGGGGTCAAGAGAAACAGTCATGCACAGAACAAACTGTGTTGATGATTCAAATATTGACACCTCTCTTCATCTGTGA

Coding sequence (CDS)

ATGAATGCTTCAAAATGTGGTGCAATGGGTAGTGGTGGATTTTGGAAGTTAGCTGTAAGAATATATCTAATAAAGAGTGGGCCAAATTTTGTTCACTCATTGGTCAATGGACTCGTGGTGTTACAAACAACCTTCCAAACCCTACATTCCAACAAGGAAAGATTTAGACAATTGCAGAAAGCTAAGGAGTTGAGAGAGCAGAAAGAATTTCGAAGGCTGTCGTCTGAGTCGATACAGGCCAATACAGCAGTGTTCTCTGAGCAAACTGGTTTATATTTCCATTCTGAACTAGTTCTTCCACCTATGTCACCACTCCAAGGCTCTTCATACCTTCAGCCAATCTTGGAAAGCAGAAAATCTCATCTTCAATTCACAGATAATCTTACTTTATCAGACATGGGGTCAAGAGAAACAGTCATGCACAGAACAAACTGTGTTGATGATTCAAATATTGACACCTCTCTTCATCTGTGA

Protein sequence

MNASKCGAMGSGGFWKLAVRIYLIKSGPNFVHSLVNGLVVLQTTFQTLHSNKERFRQLQKAKELREQKEFRRLSSESIQANTAVFSEQTGLYFHSELVLPPMSPLQGSSYLQPILESRKSHLQFTDNLTLSDMGSRETVMHRTNCVDDSNIDTSLHL
Homology
BLAST of ClCG09G021090 vs. NCBI nr
Match: KAE8645981.1 (hypothetical protein Csa_015491 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-44
Identity = 98/106 (92.45%), Postives = 102/106 (96.23%), Query Frame = 0

Query: 52  KERFRQLQKAKELREQKEFRRLSSESIQANTAVFSEQTGLYFHSELVLPPMSPLQGSSYL 111
           +ERFRQLQKAKELREQKEFRR+SSESIQANTAV SEQTGLYFHSELVLPP SPLQGSSYL
Sbjct: 19  QERFRQLQKAKELREQKEFRRMSSESIQANTAVCSEQTGLYFHSELVLPPRSPLQGSSYL 78

Query: 112 QPILESRKSHLQFTDNLTLSDMGSRETVMHRTNCVDDSNIDTSLHL 158
           QP+LESRKSHLQ TDNLTLSD+GSRE VMHRTNCVDDSNIDTSLHL
Sbjct: 79  QPVLESRKSHLQVTDNLTLSDVGSREKVMHRTNCVDDSNIDTSLHL 124

BLAST of ClCG09G021090 vs. NCBI nr
Match: KAA0048723.1 (hypothetical protein E6C27_scaffold43G00160 [Cucumis melo var. makuwa] >TYK07906.1 hypothetical protein E5676_scaffold265G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 185.3 bits (469), Expect = 4.1e-43
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0

Query: 52  KERFRQLQKAKELREQKEFRRLSSESIQANTAVFSEQTGLYFHSELVLPPMSPLQGSSYL 111
           +ERFRQLQKAKELREQKE RR+SSESIQ NTAV SEQTGLYFHSELVLPP SPLQG SYL
Sbjct: 19  QERFRQLQKAKELREQKEIRRMSSESIQPNTAVCSEQTGLYFHSELVLPPRSPLQGPSYL 78

Query: 112 QPILESRKSHLQFTDNLTLSDMGSRETVMHRTNCVDDSNIDTSLHL 158
           QP+LESRKSHLQ TDNLTLSDMGSRE VMHRTNCVDDSNIDTSLHL
Sbjct: 79  QPVLESRKSHLQVTDNLTLSDMGSREKVMHRTNCVDDSNIDTSLHL 124

BLAST of ClCG09G021090 vs. NCBI nr
Match: KAG6607761.1 (hypothetical protein SDJN03_01103, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 170.2 bits (430), Expect = 1.4e-38
Identity = 88/106 (83.02%), Postives = 98/106 (92.45%), Query Frame = 0

Query: 52  KERFRQLQKAKELREQKEFRRLSSESIQANTAVFSEQTGLYFHSELVLPPMSPLQGSSYL 111
           +ERFRQLQKAKELRE+KE + LSSESI+AN+A +SEQTGL+FHSELVLPP SP QGSSYL
Sbjct: 13  QERFRQLQKAKELRERKEVQNLSSESIRANSAAWSEQTGLFFHSELVLPPKSPFQGSSYL 72

Query: 112 QPILESRKSHLQFTDNLTLSDMGSRETVMHRTNCVDDSNIDTSLHL 158
           QP LESRKSHLQ TD+L+LSDMGSRETVM+RTNCVDD NIDTSLHL
Sbjct: 73  QPSLESRKSHLQITDDLSLSDMGSRETVMNRTNCVDDLNIDTSLHL 118

BLAST of ClCG09G021090 vs. NCBI nr
Match: KAF3950464.1 (hypothetical protein CMV_023789 [Castanea mollissima])

HSP 1 Score: 98.2 bits (243), Expect = 6.7e-17
Identity = 54/106 (50.94%), Postives = 70/106 (66.04%), Query Frame = 0

Query: 52  KERFRQLQKAKELREQKEFRRLSSESIQANTAVFSEQTGLYFHSELVLPPMSPLQGSSYL 111
           +ERFRQLQ+AKE+RE +E  RLSSE  + N A   + T L+FHSEL+ PP    QGS YL
Sbjct: 19  QERFRQLQRAKEMREARELLRLSSEPERVNPATLYDPTRLFFHSELIYPPRPLPQGSLYL 78

Query: 112 QPILESRKSHLQFTDNLTLSDMGSRETVMHRTNCVDDSNIDTSLHL 158
           QP  +S+ + +Q  D      +GS +TV  R N  DDS++DTSLHL
Sbjct: 79  QPNFQSKHTDIQVKDTPFFGSLGSIDTVTDRKNDFDDSDVDTSLHL 124

BLAST of ClCG09G021090 vs. NCBI nr
Match: XP_025015545.1 (uncharacterized protein LOC112536879 [Ricinus communis] >EEF29345.1 conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 98.2 bits (243), Expect = 6.7e-17
Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 0

Query: 47  TLHSN----KERFRQLQKAKELREQKEFRRLSSESIQANTAVFSEQTGLYFHSELVLPPM 106
           ++HS+    +ERFRQL++AKE+R+Q+E  RL SE+ Q       EQ+  +FHSELVLP  
Sbjct: 10  SIHSSIALLQERFRQLERAKEMRQQRELLRLFSEAEQVKPPKAFEQSRPFFHSELVLPLG 69

Query: 107 SPLQGSSYLQPILESRKSHLQFTDNLTLSDMGSRETVMHRTNCVDDSNIDTSLHL 158
            PLQ S YLQP +++R + LQ  +     D+ S+ TVMH TN  D+S++DTSLHL
Sbjct: 70  QPLQDSLYLQPNMQNRHAELQINETPNSVDLWSKNTVMHITNNFDESDVDTSLHL 124

BLAST of ClCG09G021090 vs. ExPASy TrEMBL
Match: A0A0A0LBC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769680 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 8.1e-45
Identity = 98/106 (92.45%), Postives = 102/106 (96.23%), Query Frame = 0

Query: 52  KERFRQLQKAKELREQKEFRRLSSESIQANTAVFSEQTGLYFHSELVLPPMSPLQGSSYL 111
           +ERFRQLQKAKELREQKEFRR+SSESIQANTAV SEQTGLYFHSELVLPP SPLQGSSYL
Sbjct: 19  QERFRQLQKAKELREQKEFRRMSSESIQANTAVCSEQTGLYFHSELVLPPRSPLQGSSYL 78

Query: 112 QPILESRKSHLQFTDNLTLSDMGSRETVMHRTNCVDDSNIDTSLHL 158
           QP+LESRKSHLQ TDNLTLSD+GSRE VMHRTNCVDDSNIDTSLHL
Sbjct: 79  QPVLESRKSHLQVTDNLTLSDVGSREKVMHRTNCVDDSNIDTSLHL 124

BLAST of ClCG09G021090 vs. ExPASy TrEMBL
Match: A0A5D3CC18 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G00160 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 2.0e-43
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0

Query: 52  KERFRQLQKAKELREQKEFRRLSSESIQANTAVFSEQTGLYFHSELVLPPMSPLQGSSYL 111
           +ERFRQLQKAKELREQKE RR+SSESIQ NTAV SEQTGLYFHSELVLPP SPLQG SYL
Sbjct: 19  QERFRQLQKAKELREQKEIRRMSSESIQPNTAVCSEQTGLYFHSELVLPPRSPLQGPSYL 78

Query: 112 QPILESRKSHLQFTDNLTLSDMGSRETVMHRTNCVDDSNIDTSLHL 158
           QP+LESRKSHLQ TDNLTLSDMGSRE VMHRTNCVDDSNIDTSLHL
Sbjct: 79  QPVLESRKSHLQVTDNLTLSDMGSREKVMHRTNCVDDSNIDTSLHL 124

BLAST of ClCG09G021090 vs. ExPASy TrEMBL
Match: B9T468 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0423940 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 3.2e-17
Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 0

Query: 47  TLHSN----KERFRQLQKAKELREQKEFRRLSSESIQANTAVFSEQTGLYFHSELVLPPM 106
           ++HS+    +ERFRQL++AKE+R+Q+E  RL SE+ Q       EQ+  +FHSELVLP  
Sbjct: 10  SIHSSIALLQERFRQLERAKEMRQQRELLRLFSEAEQVKPPKAFEQSRPFFHSELVLPLG 69

Query: 107 SPLQGSSYLQPILESRKSHLQFTDNLTLSDMGSRETVMHRTNCVDDSNIDTSLHL 158
            PLQ S YLQP +++R + LQ  +     D+ S+ TVMH TN  D+S++DTSLHL
Sbjct: 70  QPLQDSLYLQPNMQNRHAELQINETPNSVDLWSKNTVMHITNNFDESDVDTSLHL 124

BLAST of ClCG09G021090 vs. ExPASy TrEMBL
Match: A0A067L442 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01002 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 2.1e-16
Identity = 52/106 (49.06%), Postives = 73/106 (68.87%), Query Frame = 0

Query: 52  KERFRQLQKAKELREQKEFRRLSSESIQANTAVFSEQTGLYFHSELVLPPMSPLQGSSYL 111
           +ERFRQL+KAKE+R+Q+E  RL SE+ Q  +A   E +  +FHSEL L P  PLQGS Y+
Sbjct: 19  QERFRQLEKAKEMRQQRELLRLFSEAEQVQSAKDYEPSRPFFHSELTLSPGQPLQGSLYV 78

Query: 112 QPILESRKSHLQFTDNLTLSDMGSRETVMHRTNCVDDSNIDTSLHL 158
           QP +E++ + L   +   L ++ S+ TVMH  N  D+S++DTSLHL
Sbjct: 79  QPNMENKYTDLPVNETPNLVNLWSKNTVMHNINNFDESDVDTSLHL 124

BLAST of ClCG09G021090 vs. ExPASy TrEMBL
Match: A0A6P5ZL76 (uncharacterized protein LOC111301893 OS=Durio zibethinus OX=66656 GN=LOC111301893 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 6.7e-15
Identity = 49/106 (46.23%), Postives = 76/106 (71.70%), Query Frame = 0

Query: 52  KERFRQLQKAKELREQKEFRRLSSESIQANTAVFSEQTGLYFHSELVLPPMSPLQGSSYL 111
           +ERFRQLQ+AKE+R+++E  RL SE+ + N A+  E + L+FHSEL+L P  PLQGS   
Sbjct: 17  RERFRQLQRAKEMRQEREVLRLLSEAERINPAIPHEASQLFFHSELILQPRPPLQGSLSS 76

Query: 112 QPILESRKSHLQFTDNLTLSDMGSRETVMHRTNCVDDSNIDTSLHL 158
           +P + +  +  Q  +  +LS++  R+TVMH T+ ++DS++DT+LHL
Sbjct: 77  EPSMRNMHTQRQVIETPSLSNLRPRDTVMH-TSTLNDSDVDTTLHL 121

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAE8645981.11.7e-4492.45hypothetical protein Csa_015491 [Cucumis sativus][more]
KAA0048723.14.1e-4390.57hypothetical protein E6C27_scaffold43G00160 [Cucumis melo var. makuwa] >TYK07906... [more]
KAG6607761.11.4e-3883.02hypothetical protein SDJN03_01103, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF3950464.16.7e-1750.94hypothetical protein CMV_023789 [Castanea mollissima][more]
XP_025015545.16.7e-1748.70uncharacterized protein LOC112536879 [Ricinus communis] >EEF29345.1 conserved hy... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LBC78.1e-4592.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769680 PE=4 SV=1[more]
A0A5D3CC182.0e-4390.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
B9T4683.2e-1748.70Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0423940 PE=4 SV=1[more]
A0A067L4422.1e-1649.06Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01002 PE=4 SV=1[more]
A0A6P5ZL766.7e-1546.23uncharacterized protein LOC111301893 OS=Durio zibethinus OX=66656 GN=LOC11130189... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34570:SF2OS03G0593100 PROTEINcoord: 53..157
NoneNo IPR availablePANTHERPTHR34570OS03G0593100 PROTEINcoord: 53..157

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G021090.2ClCG09G021090.2mRNA