ClCG09G020570 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAATAAATAAATAAATAAAACATCAGAGCATCTTCTCCTTTTACTCTGTCGTTGCCTTCTTCACCTACCTTCTTCTCCATAATTCCTTCTCCGATCATCTCCTCTTCCTCTCAGATCTCCAGGTATCATTCTGCATTTCTTTCCTTTTTCATTTCTTCTTTCCGATCTGCTTTTAATTTAATCCTTAATTTTCTATTTTACGATTTCTGTTCTAATTTTATCGATTTTCTCTGCGATCTGACTTGCTTCACCTACATGTGTTTTTTTGTGAGCTTAATTTGTACCTTCGAATTGTTCTGGATTTGATGTTTTAGTTTTGGTATTTTGTCATCTCTTAGCTAAGGATTCAGTTCTGAGTTGATTGTTTTGGAATTCTTTTATATATAGTCTGAATTTGAATGATCGTTTTTCATTACATCCGAATTGATCAAGTTCCCAAAATTGACTTGATAAACAACTGAGTTTTTGTCTTCTTCTTTTGTACATTTGATCTTTATTCTGTTTGTTGTGTCAATTATTACTTGCATGTCTTTGTAACTTCTCCTGATTGTTGGAGTGCTTACAGTAATTTCGGCCTCTAGATGAAATAGGAAAATTTCTTTGGTTGACTTTGCTGGATAAAAGTTGGCTTTAAGCAGTCGTGTGGATTTTGGAACTTTAATGGCTGAATTGAAAAGAAAAACCTTCATGCGGTGGATATTATTTCTTTGTGTATTCTTCTTCTATATATGTACAGATTCTACCATGAAAACCTTATGAGGACCATTCCATCTTTGTGCAGGTTAGGTTATTCAAGGTACAAATGGATAATTTCCTTGGAGGCTTTACGGAGGATTCTACAACTTTTAATCAGGATATTCAAAGATGTCCATTCTTAAGGAATATTAATGAGCCGACAAATTTCTCATTTTCCTCGTCCATGGCATTCCCAATACCTGTAAGTTTCTTCTTTCTATGAATTTATATTTGGATGTTCGTTTCATCAAATATTCCAAACGAAAATATATATTTACCCGTTTGTTTTATAAATTACAACATTGGTCAATGTTCAACTATGGAAAACACATGAAAAATCAGATATGTTGATGTATTTCCCTAATATTATATTTCAATGTGATAGGAACGAAATAATTCAGGTCAAAGTTATTCAGTGTTCCATTATTTTATATTTATTTATGATACTCGATAACTAAATTGAGGTAGATTAGTTTTACAAAACTTGACACATACGTAAATGTTAGTTTTTCTTTTATACAAACCATATCTTACTATTTATTGTTTCCAGCCCAGGCAGTAGATTAATTATTCTGGTGTACGTGCTTTGAATTTCTGGCTAGCATGACTCAACAGATATGAATTATTGGATATTTCCTCTATTTTATACTTTACTATTAGCAGTTAGTTCTAGAGTTCAGGTGTTATATTTAGTTTTTACCTTACAATCTCCACTCCAATATAGGCTGTTGTTAGGTCTTCCTCAATGTTCTTGTAATTCAGTTTTCCACATAATTCTTACGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTCTAGTTAATCTAATAGCTGCTTCTACTCTCTTTATAGGTTCGTGGAGCTAAAGGGCCAATTTTTGAAGATGGTCCCAATTTTGATATGGCATTTAGGCTTTTTCATGGACGAGATGGAGTTGTTCCACTCTCTAGAAGATCTATGCATCCAGAGAGTCTAGAACTCAAACCAGCCCCATCACAGTTCAATCCTTTAGCTGCAAAGGCAGCCACTATTAGCCTCTCATCCTTCGGACCTGGAGGCCCCTTCAGTTTTGATTCATTTTCAGAGAAGTGGAGAAGTCAGAAGAAGAAATTTGAGTCATCCAAGAAAGAATCTTCTTCGCAGGTGATCAATTGATAATCATCTATGGGCTATTATCATTTAGTACTTCAGCTGTTAGGTGAAGAATGATGAAATTTTTATGCTGAGAATCTCATTATCTGAAATGGTGAAAATCTAGGATGAATGCAATTTGTCCTCTTGACTTATTATCATGTTCATTTTCAGGGTGGAAATTCACAGCATGAAGCAGCGGGCAATGAGTGGTTACAAATGGGGAACTGCCCAATTGCAAAGTCATACCGTGCTGTTAGCAGTGTCATACCGCTTGTTGCAAAAGCTCTTCAGCCCCCACCAGGCATGAAATTCAAATGCCCACCAGCAGTAGTTGCAGCAAGAGCAGCTTTAGCAAAGACTGCATTTGCAAAGAATCTCCGCCCCCAACCGTTGCCAGCAAAAGTACTCGCAATCGGTCTACTAGGCATGGCAGCAAACGTACCTTTAGGAATATGGAGAGAACACACTGAAAAATTCTCACCCTCTTGGTTTGCTGCCGTTCATGCAGCTGTTCCATTTATAGCTATGCTAAGGAAATCTATCTTAATGCCCAAATCAGCCATGGCATTTACAATTGCAGCATCAGTTTTAGGGCAGGTCATCGGCTCAAGGGCAGAGCGACTCCGACTCAAGGCAGTGGCTTCGAAAAAGCTAACCCTCGAAGACTCTCTCGCCGCAACCACCCTTTTGCCGGTGGTTACCATGAAGAATGGTCATTGTGGCGACGTAGAAAGCTGGAATCCAGTTACCACTCTTCAAGTAGCAGGCCCACCTTCACCAACCAAGGTGCCCTGCTAATCTCTTCTTCACCATTTATTGTGAGTGTTCTTCACTGTATCCTAATGAGTGTAATTCTTCAATTATACACCAGTTTGTTCATTTGTTTGAAAGCATTTTGACACTTCAAAATATAGAATGATGAAATAAAAAGTCTCTGCGTGTGTGTGTGAATTAAGT AAAAATAAATAAATAAATAAAACATCAGAGCATCTTCTCCTTTTACTCTGTCGTTGCCTTCTTCACCTACCTTCTTCTCCATAATTCCTTCTCCGATCATCTCCTCTTCCTCTCAGATCTCCAGGTTAGGTTATTCAAGGTACAAATGGATAATTTCCTTGGAGGCTTTACGGAGGATTCTACAACTTTTAATCAGGATATTCAAAGATGTCCATTCTTAAGGAATATTAATGAGCCGACAAATTTCTCATTTTCCTCGTCCATGGCATTCCCAATACCTGTTCGTGGAGCTAAAGGGCCAATTTTTGAAGATGGTCCCAATTTTGATATGGCATTTAGGCTTTTTCATGGACGAGATGGAGTTGTTCCACTCTCTAGAAGATCTATGCATCCAGAGAGTCTAGAACTCAAACCAGCCCCATCACAGTTCAATCCTTTAGCTGCAAAGGCAGCCACTATTAGCCTCTCATCCTTCGGACCTGGAGGCCCCTTCAGTTTTGATTCATTTTCAGAGAAGTGGAGAAGTCAGAAGAAGAAATTTGAGTCATCCAAGAAAGAATCTTCTTCGCAGGGTGGAAATTCACAGCATGAAGCAGCGGGCAATGAGTGGTTACAAATGGGGAACTGCCCAATTGCAAAGTCATACCGTGCTGTTAGCAGTGTCATACCGCTTGTTGCAAAAGCTCTTCAGCCCCCACCAGGCATGAAATTCAAATGCCCACCAGCAGTAGTTGCAGCAAGAGCAGCTTTAGCAAAGACTGCATTTGCAAAGAATCTCCGCCCCCAACCGTTGCCAGCAAAAGTACTCGCAATCGGTCTACTAGGCATGGCAGCAAACGTACCTTTAGGAATATGGAGAGAACACACTGAAAAATTCTCACCCTCTTGGTTTGCTGCCGTTCATGCAGCTGTTCCATTTATAGCTATGCTAAGGAAATCTATCTTAATGCCCAAATCAGCCATGGCATTTACAATTGCAGCATCAGTTTTAGGGCAGGTCATCGGCTCAAGGGCAGAGCGACTCCGACTCAAGGCAGTGGCTTCGAAAAAGCTAACCCTCGAAGACTCTCTCGCCGCAACCACCCTTTTGCCGGTGGTTACCATGAAGAATGGTCATTGTGGCGACGTAGAAAGCTGGAATCCAGTTACCACTCTTCAAGTAGCAGGCCCACCTTCACCAACCAAGGTGCCCTGCTAATCTCTTCTTCACCATTTATTGTGAGTGTTCTTCACTGTATCCTAATGAGTGTAATTCTTCAATTATACACCAGTTTGTTCATTTGTTTGAAAGCATTTTGACACTTCAAAATATAGAATGATGAAATAAAAAGTCTCTGCGTGTGTGTGTGAATTAAGT ATGGATAATTTCCTTGGAGGCTTTACGGAGGATTCTACAACTTTTAATCAGGATATTCAAAGATGTCCATTCTTAAGGAATATTAATGAGCCGACAAATTTCTCATTTTCCTCGTCCATGGCATTCCCAATACCTGTTCGTGGAGCTAAAGGGCCAATTTTTGAAGATGGTCCCAATTTTGATATGGCATTTAGGCTTTTTCATGGACGAGATGGAGTTGTTCCACTCTCTAGAAGATCTATGCATCCAGAGAGTCTAGAACTCAAACCAGCCCCATCACAGTTCAATCCTTTAGCTGCAAAGGCAGCCACTATTAGCCTCTCATCCTTCGGACCTGGAGGCCCCTTCAGTTTTGATTCATTTTCAGAGAAGTGGAGAAGTCAGAAGAAGAAATTTGAGTCATCCAAGAAAGAATCTTCTTCGCAGGGTGGAAATTCACAGCATGAAGCAGCGGGCAATGAGTGGTTACAAATGGGGAACTGCCCAATTGCAAAGTCATACCGTGCTGTTAGCAGTGTCATACCGCTTGTTGCAAAAGCTCTTCAGCCCCCACCAGGCATGAAATTCAAATGCCCACCAGCAGTAGTTGCAGCAAGAGCAGCTTTAGCAAAGACTGCATTTGCAAAGAATCTCCGCCCCCAACCGTTGCCAGCAAAAGTACTCGCAATCGGTCTACTAGGCATGGCAGCAAACGTACCTTTAGGAATATGGAGAGAACACACTGAAAAATTCTCACCCTCTTGGTTTGCTGCCGTTCATGCAGCTGTTCCATTTATAGCTATGCTAAGGAAATCTATCTTAATGCCCAAATCAGCCATGGCATTTACAATTGCAGCATCAGTTTTAGGGCAGGTCATCGGCTCAAGGGCAGAGCGACTCCGACTCAAGGCAGTGGCTTCGAAAAAGCTAACCCTCGAAGACTCTCTCGCCGCAACCACCCTTTTGCCGGTGGTTACCATGAAGAATGGTCATTGTGGCGACGTAGAAAGCTGGAATCCAGTTACCACTCTTCAAGTAGCAGGCCCACCTTCACCAACCAAGGTGCCCTGCTAA MDNFLGGFTEDSTTFNQDIQRCPFLRNINEPTNFSFSSSMAFPIPVRGAKGPIFEDGPNFDMAFRLFHGRDGVVPLSRRSMHPESLELKPAPSQFNPLAAKAATISLSSFGPGGPFSFDSFSEKWRSQKKKFESSKKESSSQGGNSQHEAAGNEWLQMGNCPIAKSYRAVSSVIPLVAKALQPPPGMKFKCPPAVVAARAALAKTAFAKNLRPQPLPAKVLAIGLLGMAANVPLGIWREHTEKFSPSWFAAVHAAVPFIAMLRKSILMPKSAMAFTIAASVLGQVIGSRAERLRLKAVASKKLTLEDSLAATTLLPVVTMKNGHCGDVESWNPVTTLQVAGPPSPTKVPC Homology
BLAST of ClCG09G020570 vs. NCBI nr
Match: XP_038891089.1 (uncharacterized protein LOC120080490 [Benincasa hispida]) HSP 1 Score: 664.8 bits (1714), Expect = 4.0e-187 Identity = 334/350 (95.43%), Postives = 344/350 (98.29%), Query Frame = 0
BLAST of ClCG09G020570 vs. NCBI nr
Match: XP_008465667.1 (PREDICTED: uncharacterized protein LOC103503307 [Cucumis melo] >XP_008465668.1 PREDICTED: uncharacterized protein LOC103503307 [Cucumis melo] >KAA0040610.1 uncharacterized protein E6C27_scaffold262G001870 [Cucumis melo var. makuwa] >TYK05654.1 uncharacterized protein E5676_scaffold98G001170 [Cucumis melo var. makuwa]) HSP 1 Score: 661.0 bits (1704), Expect = 5.7e-186 Identity = 334/350 (95.43%), Postives = 342/350 (97.71%), Query Frame = 0
BLAST of ClCG09G020570 vs. NCBI nr
Match: XP_004143803.1 (uncharacterized protein LOC101212152 [Cucumis sativus] >XP_031742132.1 uncharacterized protein LOC101212152 [Cucumis sativus]) HSP 1 Score: 660.6 bits (1703), Expect = 7.5e-186 Identity = 333/350 (95.14%), Postives = 340/350 (97.14%), Query Frame = 0
BLAST of ClCG09G020570 vs. NCBI nr
Match: KAE8648515.1 (hypothetical protein Csa_008068 [Cucumis sativus]) HSP 1 Score: 653.3 bits (1684), Expect = 1.2e-183 Identity = 330/347 (95.10%), Postives = 337/347 (97.12%), Query Frame = 0
BLAST of ClCG09G020570 vs. NCBI nr
Match: XP_023551625.1 (uncharacterized protein LOC111809406 [Cucurbita pepo subsp. pepo] >KAG7016279.1 hypothetical protein SDJN02_21385, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 645.2 bits (1663), Expect = 3.3e-181 Identity = 324/350 (92.57%), Postives = 338/350 (96.57%), Query Frame = 0
BLAST of ClCG09G020570 vs. ExPASy TrEMBL
Match: A0A1S3CPS7 (uncharacterized protein LOC103503307 OS=Cucumis melo OX=3656 GN=LOC103503307 PE=4 SV=1) HSP 1 Score: 661.0 bits (1704), Expect = 2.8e-186 Identity = 334/350 (95.43%), Postives = 342/350 (97.71%), Query Frame = 0
BLAST of ClCG09G020570 vs. ExPASy TrEMBL
Match: A0A5A7TBC4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001170 PE=4 SV=1) HSP 1 Score: 661.0 bits (1704), Expect = 2.8e-186 Identity = 334/350 (95.43%), Postives = 342/350 (97.71%), Query Frame = 0
BLAST of ClCG09G020570 vs. ExPASy TrEMBL
Match: A0A0A0KNM8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G492350 PE=4 SV=1) HSP 1 Score: 660.6 bits (1703), Expect = 3.6e-186 Identity = 333/350 (95.14%), Postives = 340/350 (97.14%), Query Frame = 0
BLAST of ClCG09G020570 vs. ExPASy TrEMBL
Match: A0A6J1FNV3 (uncharacterized protein LOC111445588 OS=Cucurbita moschata OX=3662 GN=LOC111445588 PE=4 SV=1) HSP 1 Score: 642.5 bits (1656), Expect = 1.0e-180 Identity = 323/350 (92.29%), Postives = 337/350 (96.29%), Query Frame = 0
BLAST of ClCG09G020570 vs. ExPASy TrEMBL
Match: A0A6J1BXQ5 (uncharacterized protein LOC111006669 OS=Momordica charantia OX=3673 GN=LOC111006669 PE=4 SV=1) HSP 1 Score: 639.0 bits (1647), Expect = 1.1e-179 Identity = 324/350 (92.57%), Postives = 336/350 (96.00%), Query Frame = 0
BLAST of ClCG09G020570 vs. TAIR 10
Match: AT4G25030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45410.3); Has 125 Blast hits to 125 proteins in 36 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 4; Plants - 88; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 430.6 bits (1106), Expect = 1.2e-120 Identity = 238/350 (68.00%), Postives = 269/350 (76.86%), Query Frame = 0
BLAST of ClCG09G020570 vs. TAIR 10
Match: AT4G25030.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G45410.3); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 430.6 bits (1106), Expect = 1.2e-120 Identity = 238/350 (68.00%), Postives = 269/350 (76.86%), Query Frame = 0
BLAST of ClCG09G020570 vs. TAIR 10
Match: AT5G45410.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits to 124 proteins in 34 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 396.0 bits (1016), Expect = 3.2e-110 Identity = 205/309 (66.34%), Postives = 246/309 (79.61%), Query Frame = 0
BLAST of ClCG09G020570 vs. TAIR 10
Match: AT5G45410.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 396.0 bits (1016), Expect = 3.2e-110 Identity = 205/309 (66.34%), Postives = 246/309 (79.61%), Query Frame = 0
BLAST of ClCG09G020570 vs. TAIR 10
Match: AT5G45410.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G25030.2); Has 124 Blast hits to 124 proteins in 34 species: Archae - 2; Bacteria - 31; Metazoa - 0; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 396.0 bits (1016), Expect = 3.2e-110 Identity = 205/309 (66.34%), Postives = 246/309 (79.61%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|