ClCG09G020150 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG09G020150
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionDDE Tnp4 domain-containing protein
LocationCG_Chr09: 37224692 .. 37226920 (-)
RNA-Seq ExpressionClCG09G020150
SyntenyClCG09G020150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAGCCTTCCTTGTCCCCATCCCCGCCCCCTTATTCCATTCCCCTTCCTCGCGAATTTGCCCATGGGGAACAGGGCGGGGATTGCGTGGGGATCAGATTCCCAGCGGGGAAAAATCATCGCCTTGGTTTTTTTAACATTTTTATTTCGGAGAAATTTAACAATTTTTTTAGTTCAATTAATTATATATATTTTTAACAATTCTTTAATGGAAGGATATCCTTTACAATTTTTATTCAAATAAAACATATTAATTTTCCTAATAAAAACAATAATACATATGCAATTTGAAAAAGATATAATTAAAATGCTAAATTTCCATAATTTATAAAAATTAGAATTTAACAATTAGAACATCCTATCTTAAATATTAAAACATCTAAGCAATTAAAGTAAATAAAGTCTTAAACTTACATAATTATATAACATCCATAATTATCTAACAAAGTTTTCATATATATATATATATATATATATATATATATATATATATATATATATATAAATAAAATCCGGGGAGGGGTAGGGCCGAGGCCGAGAAATATAATCCCTGTCCCCGACCCTGATTTGTAAATGGGAAAAAATCACCACTCCCTCCCCCATTCTCCATGTATTCGGGGATTCCTCGCCCCGTTCGGGGCTAGTCCCCTTGAGGCCCTGGTCTTGTTGGTGAAATGAACATCTCTACAAAGGATGTAATTTTGTAGTTTTGTTTGCTTATTTCCTAAAGAAAAAATGAAGTACTGATGTTTGGTAAATTTCAACTTTATATCTAAAAAATTATACTAGTGTGTGGTAAATTGATTACTAAATTATTGTGGTTCCAATACATAAACTAAAATAGACATACTATGCCATATTGAGTTTAATAGTTCAATATGAGCATAACTCATCTATTTTTTTTAATAATTGAGCTATGCTTATTTACTTTTGACAAAAAAAAAAAAAAATTAGAGGTTTGAATCCTCCATCTTACATAAAAGCCAATGAATTTTTATAGGTTAAACTACAAGTTCTTGAAATTTGGAATTTATATCTTTTTGGTTATAAAGTTTTAAAAATGTTTAGTACAATGAGTTTTCAATTTTGTATTTGATAAATTTCTAACAAATTTAAATTTATTAAAAATTAATTGATCTATTGAAATAAATTTGGATTCTCAATCTAAACTTTCATTTTGTGTATGGTAGTTTGTATTTTTTTTTATAAAATAATAAAGTCTAAATTTGTAATTTTAAAAATGAATAAATTAAATATATATAGATTTCAAAGTTGAGGGACTTAATTTTTTTAGCAAATTAATATAAATAAAAATAATATTAAATTATTTACAAATATAAAAAATTTTCAGTCCATCAATGATAAACTTCTATAGCTTGTCTATCACCGAAGTCATGTACGTCTATCACTTACTATATTTGTATATTTATAAATAATTTGGTTCATTTTACAATATTTGAAAACAACTCTAATTTTTTTAAAAAAACTATCTGTTAAATAATCTCAAATAAAAAGCCTAAACCAGTGAGAAACTCGAAGTAATCTTATTTTCTGCTCGAGTGGAGAGACGACATGTCGACTTTGGCTGTACTGTACTGCATCGTAAAATCATGAAGCGGAGTCGACAAATCGACGCAGATTGTGAGGTAGCTGGGCGCAAAATTCTCTGGTTGGTAGAACTTAGAAATTAGAAGGAAGAGAGTTCAAAATCTCAGTTGGTTTAGGGTTAGGGTTTTTGGGATATGGAGGTCAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCATTCCTTATTGCTTGGGCCGCAGGTCTCCAGGTGCAATTCCCTGTTTTCGGTTTTAATTTTCTACTTCACCGCCTTTCTTTTTCCATTCCTACTGTCTGTTCTTATATTGAAGTTGAAAATTGTTGAACTGATACTTCATGTTTTGGGATTGATTTTGAAACTCTTAAATTCACCCAATCATACTGATTTTGATGGTATGAAAATCAGATTTAAAAGTGTGAAACCAAACATAATAGATCACTTATAAGCAATCGTTTTTGCTAAGATCACTATTTCTGATTCATTTCCAATCATGCCATTAGTTGATTTGGATTCTGGGCTCGATTTGAACTTTAAAGTTAGATGTGGGGGAATTTCTGGTACAGGGTCATATGATGTATTTGCAGAAGCAGGATTCTTTCAAGCAGAAGTTTGGGACTCCCAATCAAGAAAGTGA

mRNA sequence

ATGAGGAAGCCTTCCTTGTCCCCATCCCCGCCCCCTTATTCCATTCCCCTTCCTCGCGAATTTGCCCATGGGGAACAGGGCGGGGATTGCGTGGGGATCAGATTCCCAGCGGGGAAAAATCATCGCCTTGTGGAGAGACGACATGTCGACTTTGGCTGTACTGTACTGCATCGTAAAATCATGAAGCGGAGTCGACAAATCGACGCAGATTGTGAGGGTTTTTGGGATATGGAGGTCAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCATTCCTTATTGCTTGGGCCGCAGGTCTCCAGTTGAAAATTGTTGAACTGATACTTCATGTTTTGGGATTGATTTTGAAACTCTTAAATTCACCCAATCATACTGATTTTGATGTTGATTTGGATTCTGGGCTCGATTTGAACTTTAAAGTTAGATGTGGGGGAATTTCTGGTACAGGGTCATATGATGTATTTGCAGAAGCAGGATTCTTTCAAGCAGAAGTTTGGGACTCCCAATCAAGAAAGTGA

Coding sequence (CDS)

ATGAGGAAGCCTTCCTTGTCCCCATCCCCGCCCCCTTATTCCATTCCCCTTCCTCGCGAATTTGCCCATGGGGAACAGGGCGGGGATTGCGTGGGGATCAGATTCCCAGCGGGGAAAAATCATCGCCTTGTGGAGAGACGACATGTCGACTTTGGCTGTACTGTACTGCATCGTAAAATCATGAAGCGGAGTCGACAAATCGACGCAGATTGTGAGGGTTTTTGGGATATGGAGGTCAAGAATCTTCTCAAGGACAAGAAATTCTGGTTCGCCTCATTCCTTATTGCTTGGGCCGCAGGTCTCCAGTTGAAAATTGTTGAACTGATACTTCATGTTTTGGGATTGATTTTGAAACTCTTAAATTCACCCAATCATACTGATTTTGATGTTGATTTGGATTCTGGGCTCGATTTGAACTTTAAAGTTAGATGTGGGGGAATTTCTGGTACAGGGTCATATGATGTATTTGCAGAAGCAGGATTCTTTCAAGCAGAAGTTTGGGACTCCCAATCAAGAAAGTGA

Protein sequence

MRKPSLSPSPPPYSIPLPREFAHGEQGGDCVGIRFPAGKNHRLVERRHVDFGCTVLHRKIMKRSRQIDADCEGFWDMEVKNLLKDKKFWFASFLIAWAAGLQLKIVELILHVLGLILKLLNSPNHTDFDVDLDSGLDLNFKVRCGGISGTGSYDVFAEAGFFQAEVWDSQSRK
Homology
[Close]
BLAST of ClCG09G020150 vs. NCBI nr
Match: KAE8648534.1 (hypothetical protein Csa_008609 [Cucumis sativus])

HSP 1 Score: 109.0 bits (271), Expect = 4.2e-20
Identity = 59/97 (60.82%), Postives = 61/97 (62.89%), Query Frame = 0 

Query: 77  MEVKNLLKDKKFWFASFLIAWAAGLQLKIVELILHVLGLILKLLNSPNHTDFDVDLDSGL 136
           ME KNLLKDKKFWFASFLIAWAA LQL                            LDS +
Sbjct: 1   MEFKNLLKDKKFWFASFLIAWAAALQL---------------------------ILDSWI 60

Query: 137 DLNFKVRCGGISGTGSYDVFAEAGFFQAEVWDSQSRK 174
           D NF V CGG  GTG+YDVFAEAGFFQAEVWDSQSRK
Sbjct: 61  DSNFNVECGGTFGTGAYDVFAEAGFFQAEVWDSQSRK 70

[Close]
BLAST of ClCG09G020150 vs. NCBI nr
Match: CBI31718.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-04
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 73  GFWDMEVKNLLKDKKFWFASFLIAWAAGLQ 103
           GFW MEVK ++KDKKFW ASFL+AWAA LQ
Sbjct: 331 GFWKMEVKKIIKDKKFWVASFLVAWAAALQ 360

[Close]
BLAST of ClCG09G020150 vs. NCBI nr
Match: RVW49421.1 (hypothetical protein CK203_080216 [Vitis vinifera])

HSP 1 Score: 56.6 bits (135), Expect = 2.4e-04
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 73  GFWDMEVKNLLKDKKFWFASFLIAWAAGLQ 103
           GFW MEVK ++KDKKFW ASFL+AWAA LQ
Sbjct: 50  GFWKMEVKKIIKDKKFWVASFLVAWAAALQ 79

[Close]
BLAST of ClCG09G020150 vs. NCBI nr
Match: XP_038890944.1 (uncharacterized protein LOC120080371 [Benincasa hispida] >XP_038890945.1 uncharacterized protein LOC120080371 [Benincasa hispida] >XP_038890946.1 uncharacterized protein LOC120080371 [Benincasa hispida] >XP_038890947.1 uncharacterized protein LOC120080371 [Benincasa hispida] >XP_038890948.1 uncharacterized protein LOC120080371 [Benincasa hispida])

HSP 1 Score: 55.1 bits (131), Expect = 7.1e-04
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0 

Query: 77  MEVKNLLKDKKFWFASFLIAWAAGLQ 103
           MEVKNLLKDKKFWFASFLIAWAA LQ
Sbjct: 1   MEVKNLLKDKKFWFASFLIAWAAALQ 26

[Close]
BLAST of ClCG09G020150 vs. NCBI nr
Match: XP_023904757.1 (uncharacterized protein LOC112016426 [Quercus suber])

HSP 1 Score: 55.1 bits (131), Expect = 7.1e-04
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0 

Query: 77  MEVKNLLKDKKFWFASFLIAWAAGLQ 103
           MEVKNLLKDKKFWFASFLIAWAA LQ
Sbjct: 1   MEVKNLLKDKKFWFASFLIAWAAALQ 26

[Close]
BLAST of ClCG09G020150 vs. ExPASy TrEMBL
Match: F6HN91 (DDE Tnp4 domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_13s0019g00460 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-04
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 73  GFWDMEVKNLLKDKKFWFASFLIAWAAGLQ 103
           GFW MEVK ++KDKKFW ASFL+AWAA LQ
Sbjct: 330 GFWKMEVKKIIKDKKFWVASFLVAWAAALQ 359

[Close]
BLAST of ClCG09G020150 vs. ExPASy TrEMBL
Match: A0A438ENU7 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_080216 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-04
Identity = 23/30 (76.67%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 73  GFWDMEVKNLLKDKKFWFASFLIAWAAGLQ 103
           GFW MEVK ++KDKKFW ASFL+AWAA LQ
Sbjct: 50  GFWKMEVKKIIKDKKFWVASFLVAWAAALQ 79

[Close]
BLAST of ClCG09G020150 vs. ExPASy TrEMBL
Match: A0A5N6QC15 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_001517 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.4e-04
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0 

Query: 77  MEVKNLLKDKKFWFASFLIAWAAGLQ 103
           MEVKNLLKDKKFWFASFLIAWAA LQ
Sbjct: 1   MEVKNLLKDKKFWFASFLIAWAAALQ 26

[Close]
BLAST of ClCG09G020150 vs. ExPASy TrEMBL
Match: A0A6J1HBY0 (uncharacterized protein LOC111462684 OS=Cucurbita moschata OX=3662 GN=LOC111462684 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.4e-04
Identity = 25/26 (96.15%), Postives = 25/26 (96.15%), Query Frame = 0 

Query: 77  MEVKNLLKDKKFWFASFLIAWAAGLQ 103
           MEVKNLLKDKKFWFASFLIAWAA LQ
Sbjct: 1   MEVKNLLKDKKFWFASFLIAWAAALQ 26

[Close]
BLAST of ClCG09G020150 vs. ExPASy TrEMBL
Match: A0A6J1JTH2 (uncharacterized protein LOC111487347 OS=Cucurbita maxima OX=3661 GN=LOC111487347 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 4.5e-04
Identity = 24/26 (92.31%), Postives = 25/26 (96.15%), Query Frame = 0 

Query: 77  MEVKNLLKDKKFWFASFLIAWAAGLQ 103
           ME+KNLLKDKKFWFASFLIAWAA LQ
Sbjct: 1   MEIKNLLKDKKFWFASFLIAWAAALQ 26

[Close]
BLAST of ClCG09G020150 vs. TAIR 10
Match: AT2G39500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 17/25 (68.00%), Postives = 22/25 (88.00%), Query Frame = 0 

Query: 78  EVKNLLKDKKFWFASFLIAWAAGLQ 103
           +VK ++KDK+FW ASF+I WAAGLQ
Sbjct: 6   DVKTIVKDKRFWIASFIIVWAAGLQ 30

The following BLAST results are available for this feature:
BLAST of ClCG09G020150 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648534.14.2e-2060.82hypothetical protein Csa_008609 [Cucumis sativus][more]
CBI31718.32.4e-0476.67unnamed protein product, partial [Vitis vinifera][more]
RVW49421.12.4e-0476.67hypothetical protein CK203_080216 [Vitis vinifera][more]
XP_038890944.17.1e-0496.15uncharacterized protein LOC120080371 [Benincasa hispida] >XP_038890945.1 unchara... [more]
XP_023904757.17.1e-0496.15uncharacterized protein LOC112016426 [Quercus suber][more]
BLAST of ClCG09G020150 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG09G020150 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
F6HN911.2e-0476.67DDE Tnp4 domain-containing protein OS=Vitis vinifera OX=29760 GN=VIT_13s0019g004... [more]
A0A438ENU71.2e-0476.67Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_080216 PE=4 SV=1[more]
A0A5N6QC153.4e-0496.15Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_001517 PE=4 SV=1[more]
A0A6J1HBY03.4e-0496.15uncharacterized protein LOC111462684 OS=Cucurbita moschata OX=3662 GN=LOC1114626... [more]
A0A6J1JTH24.5e-0492.31uncharacterized protein LOC111487347 OS=Cucurbita maxima OX=3661 GN=LOC111487347... [more]
BLAST of ClCG09G020150 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G39500.11.2e-0468.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G020150.2ClCG09G020150.2mRNA