ClCG09G019630 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG09G019630
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	ribosomal RNA large subunit methyltransferase E
Location	CG_Chr09: 36822138 .. 36823834 (-)
RNA-Seq Expression	ClCG09G019630
Synteny	ClCG09G019630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGGGCAGGAGCACCCGATTTCTTCTACAGAGAGGCTCAACGCCTTGGCTATGTCGCAAGATCCGCCTTCAAGGTACAATCTACTTCCCCTCACTCTTTTTCCTCCTCCTTATAATCTTCGAGTCTCCCCAATCCTACTTATATGTCTTTATCCTCCTCTGCTCATAACAGTTGCTTCAGATTCAGAACCAATTCAAATTGATTACTTCAGGCTCCTCCGTTTTGGACCTTGGTTGTGCTCCCGGTGCCTGGCTTCAGGTCTGTTTTCTGCACTCTTCACCTCCATTCCGCTAACTTTTCCCTCCTTTTCACTTCCGAAATATTTCTCTGACGGTGTCAGGTAGCTTGCCAGAGTCTGGGGCCTCTGAGAAATGGAGGCTCTGTTTTGGGTATTGATATCAAGGTGAACTGTTTTTCTTCTTCTGGGTTCCTTATTTATGCTGATTTTCATTTATCAGGAAGTAATAATTTGTAAAAGAAAATGTGGGTCGTGCAGAACAGAAGGTAAAGGTTCCTCATGTGCATTGTGACTCGAGGGTTCAAACTGTTTGTGCTGATGTAATGAACCTTCCCAAAAACAAATTGAAGTCACTATCTCCTAAGGTAACTTCACTTATCAAAAGTAGGAAATGTCTTGTAGTATTTTTTTTTTGCCAATGTCATTAACGTTGAAAATTCTTTCTTCCAGTCTCTTATCTTTGAATGACGTTATTATTATAACTCCCATTAACTCAATTACTAGAATTCTATGTCCCAATTGGAATGTGTTCATCTCTTCAGTTTAATAGTGTTTTTATGTATTAAGTCTTATGATGTATGTATTACTGAGAGAGCTTTATATTTTGATTAAGGATGTTGTTTGGATTTAGCATATGATGATGGCACTAAGGTTGTGTCAACTTAGTTGAGACTAGTGTGCCTGAAGATCCTTATTTATGTTTCAATTTTCTTTGATCTCTATGTATGTCTACTTGTATTTTGAGCATTGGTCTTTTTGCATTATATCAACGAAAAGTTTGTTTACATTTAGGGAAAAAAAAAAAAAAACTAGAATTCAATTGTGCAAGTTTTTTTGTGAAATGGTTTGGTTTAGGGAATACAATATTTGCTCTTTACCTTAGAAAATTAAAGTTAAAGTTGTTAAACAAAAAAGTACGAAGAGAAGGTGCAGTAGTGACTGGGGAAGAAAATGTTACACTGTCTAAATCCTGTTATTTGCTTGGTTCTGTAGGAGAAGGGATTTTCTGTAATACTCTCAGACATGTGCCCCTTAGTATCTGGAATCACCACTAGAGATGCGACATTATCAGTTGAATTAGGGATGCAAGCAGTTAATTTGGCTCTTGGAGAAGCTGCGTTAGGTGTTGGAGATGCTATACTTGGAAAGGACAAGGACAATTTGGATGATTCAACTTCAGTTTCAGATTGTGATGGTGTGTTACGACAAGGAGGCCACCTCGTTATAAAACTATTGGAGAGTGAAGATTCCCAAGGTATAATTTTATTTCCACATAAAGTCTAGCTGGTTTTGTAGTTGGTTTGTCTTTACATCTTCCTTTATTCTTTATCTCAGAATTCAGCCGGATGTTGAAACCACTCTTCAGAAAGGCATCCTGGTTGAGGCCTAAGGCGACTAGATCGTCGTCAAGAGAGATTTATCTGATATGTCAAAGCTTGAAGGCAAGAACATAA

mRNA sequence

ATGAGTGGGGCAGGAGCACCCGATTTCTTCTACAGAGAGGCTCAACGCCTTGGCTATGTCGCAAGATCCGCCTTCAAGTTGCTTCAGATTCAGAACCAATTCAAATTGATTACTTCAGGCTCCTCCGTTTTGGACCTTGGTTGTGCTCCCGGTGCCTGGCTTCAGGTAGCTTGCCAGAGTCTGGGGCCTCTGAGAAATGGAGGCTCTGTTTTGGGTATTGATATCAAGAAGGTAAAGGTTCCTCATGTGCATTGTGACTCGAGGGTTCAAACTGTTTGTGCTGATGTAATGAACCTTCCCAAAAACAAATTGAAGTCACTATCTCCTAAGGAGAAGGGATTTTCTGTAATACTCTCAGACATGTGCCCCTTAGTATCTGGAATCACCACTAGAGATGCGACATTATCAGTTGAATTAGGGATGCAAGCAGTTAATTTGGCTCTTGGAGAAGCTGCGTTAGGTGTTGGAGATGCTATACTTGGAAAGGACAAGGACAATTTGGATGATTCAACTTCAGTTTCAGATTGTGATGGTGTGTTACGACAAGGAGGCCACCTCGTTATAAAACTATTGGAGAGTGAAGATTCCCAAGAATTCAGCCGGATGTTGAAACCACTCTTCAGAAAGGCATCCTGGTTGAGGCCTAAGGCGACTAGATCGTCGTCAAGAGAGATTTATCTGATATGTCAAAGCTTGAAGGCAAGAACATAA

Coding sequence (CDS)

ATGAGTGGGGCAGGAGCACCCGATTTCTTCTACAGAGAGGCTCAACGCCTTGGCTATGTCGCAAGATCCGCCTTCAAGTTGCTTCAGATTCAGAACCAATTCAAATTGATTACTTCAGGCTCCTCCGTTTTGGACCTTGGTTGTGCTCCCGGTGCCTGGCTTCAGGTAGCTTGCCAGAGTCTGGGGCCTCTGAGAAATGGAGGCTCTGTTTTGGGTATTGATATCAAGAAGGTAAAGGTTCCTCATGTGCATTGTGACTCGAGGGTTCAAACTGTTTGTGCTGATGTAATGAACCTTCCCAAAAACAAATTGAAGTCACTATCTCCTAAGGAGAAGGGATTTTCTGTAATACTCTCAGACATGTGCCCCTTAGTATCTGGAATCACCACTAGAGATGCGACATTATCAGTTGAATTAGGGATGCAAGCAGTTAATTTGGCTCTTGGAGAAGCTGCGTTAGGTGTTGGAGATGCTATACTTGGAAAGGACAAGGACAATTTGGATGATTCAACTTCAGTTTCAGATTGTGATGGTGTGTTACGACAAGGAGGCCACCTCGTTATAAAACTATTGGAGAGTGAAGATTCCCAAGAATTCAGCCGGATGTTGAAACCACTCTTCAGAAAGGCATCCTGGTTGAGGCCTAAGGCGACTAGATCGTCGTCAAGAGAGATTTATCTGATATGTCAAAGCTTGAAGGCAAGAACATAA

Protein sequence

MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSDMCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLRQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLKART

Homology

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BLAST of ClCG09G019630 vs. NCBI nr
Match: XP_038889598.1 (ribosomal RNA large subunit methyltransferase E isoform X1 [Benincasa hispida])

HSP 1 Score: 444.9 bits (1143), Expect = 4.4e-121
Identity = 226/236 (95.76%), Postives = 230/236 (97.46%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGP RNGGSVLGID+KKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MCPLVSGITTRDA LSVELGMQAVNLALGEAALGVGD I GKD DN+DDSTSVSDCDGVL
Sbjct: 121 MCPLVSGITTRDAALSVELGMQAVNLALGEAALGVGDVIHGKDNDNVDDSTSVSDCDGVL 180

Query: 181 RQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLKART 237
           RQGGHLVIKLLESED+QEFSRMLKPLFRK+S LRPKATRSSSREIYLICQSLKART
Sbjct: 181 RQGGHLVIKLLESEDTQEFSRMLKPLFRKSSLLRPKATRSSSREIYLICQSLKART 236

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BLAST of ClCG09G019630 vs. NCBI nr
Match: XP_008458862.1 (PREDICTED: ribosomal RNA large subunit methyltransferase E isoform X3 [Cucumis melo])

HSP 1 Score: 436.4 bits (1121), Expect = 1.5e-118
Identity = 221/238 (92.86%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGP RNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPK+KLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MCP+VSGITTRDA LSVELGMQAVNLALGEAALGVG+ I GKDKD++DDSTS SDCDGVL
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180

Query: 181 RQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS--LKART 237
           R+GGHLV+KLLESED+QEFSRMLKPLFRK+SWLRPKATRSSSREIYLICQS  L+ART
Sbjct: 181 RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART 238

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BLAST of ClCG09G019630 vs. NCBI nr
Match: XP_004142767.1 (uncharacterized protein LOC101216412 isoform X2 [Cucumis sativus] >KGN51324.1 hypothetical protein Csa_007820 [Cucumis sativus])

HSP 1 Score: 436.0 bits (1120), Expect = 2.0e-118
Identity = 223/238 (93.70%), Postives = 230/238 (96.64%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGP RNGGSVLGIDIKKVKVPH+HCDSRVQTV ADVMNLPK+KLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MCPLVSGITTRDA LSVELGMQAVNLALGEAALGVGD I GKDKD++DDSTS SDCDGVL
Sbjct: 121 MCPLVSGITTRDAALSVELGMQAVNLALGEAALGVGDVIHGKDKDSVDDSTSASDCDGVL 180

Query: 181 RQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS--LKART 237
           RQGGHLV+KLLESED+QEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS  L+ART
Sbjct: 181 RQGGHLVLKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLHLQART 238

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BLAST of ClCG09G019630 vs. NCBI nr
Match: XP_008458861.1 (PREDICTED: ribosomal RNA large subunit methyltransferase E isoform X1 [Cucumis melo])

HSP 1 Score: 423.3 bits (1087), Expect = 1.4e-114
Identity = 221/261 (84.67%), Postives = 231/261 (88.51%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGP RNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPK+KLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MCP+VSGITTRDA LSVELGMQAVNLALGEAALGVG+ I GKDKD++DDSTS SDCDGVL
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180

Query: 181 RQGGHLVIKLLESEDSQ-----------------------EFSRMLKPLFRKASWLRPKA 237
           R+GGHLV+KLLESED+Q                       EFSRMLKPLFRK+SWLRPKA
Sbjct: 181 RKGGHLVLKLLESEDTQGRILFPQLFYTWFCLPSQSSFISEFSRMLKPLFRKSSWLRPKA 240

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BLAST of ClCG09G019630 vs. NCBI nr
Match: KAG6602386.1 (hypothetical protein SDJN03_07619, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 421.0 bits (1081), Expect = 6.7e-114
Identity = 214/238 (89.92%), Postives = 230/238 (96.64%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGPL+NGGSV+GID+KKVKVPHVHCDSRVQTVCADVMNLPKNKLK+LSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAIL-GKDK-DNLDDSTSVSDCDG 180
           MCP+VSGITTRDA+LSVELGMQAVNLALGEAAL  GD ++ GK+K DN+DDS SVSD DG
Sbjct: 121 MCPMVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSASVSDYDG 180

Query: 181 VLRQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLKART 237
           +L++GGHLVIKLLESED+QEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL+A+T
Sbjct: 181 LLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 238

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BLAST of ClCG09G019630 vs. ExPASy Swiss-Prot
Match: A8ZT18 (Ribosomal RNA large subunit methyltransferase E OS=Desulfococcus oleovorans (strain DSM 6200 / JCM 39069 / Hxd3) OX=96561 GN=rlmE PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 8.8e-24
Identity = 76/235 (32.34%), Postives = 113/235 (48.09%), Query Frame = 0


Query: 3   GAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLG 62
           G   PD + R+A+   Y ARS +KL +IQ +  ++  G++VLDLGC PG+W+  A +++G
Sbjct: 8   GRKTPDHYARKAKTEHYPARSVYKLQEIQKKHNVLKPGNAVLDLGCFPGSWMMFAAETVG 67

Query: 63  PLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLK-SLSPKEKGFSVILSDM 122
               GG V GID+KKV     H  ++  ++  D+  + +  L  +L P      V+LSDM
Sbjct: 68  ---RGGKVTGIDLKKVA---THMPAQATSLQEDIYEIDREALAGTLGP----LDVVLSDM 127

Query: 123 CPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLR 182
            P   G    DA  S  L   A++LAL                              +L+
Sbjct: 128 APDTMGNKFTDAARSFHLAAAALDLAL-----------------------------FLLK 187

Query: 183 QGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLKART 237
            GGH V K+ + ED Q F  M+K  F +    +P+  R  S+E Y+I  S K  T
Sbjct: 188 PGGHFVCKVFQGEDFQNFVNMVKAEFERHKVFKPETCRKDSKETYVIGFSKKEST 203

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BLAST of ClCG09G019630 vs. ExPASy Swiss-Prot
Match: B8FL12 (Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum aliphaticivorans OX=218208 GN=rlmE PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.4e-23
Identity = 75/226 (33.19%), Postives = 110/226 (48.67%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLRNG 67
           D +  +AQ+ G+ ARS FKL ++Q ++K++  G  VLDLGCAPG+WL+ A Q +G   + 
Sbjct: 13  DHYTDKAQKAGFPARSVFKLEEMQKRWKILRPGQKVLDLGCAPGSWLKYASQIVG---DS 72

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSDMCPLVSG 127
           G V+G+D+K +  P        Q +  D   L +  L  +    + F V+LSDM P  +G
Sbjct: 73  GRVIGLDLKPMDQPD---KPNAQFIQGDAFELTQEFLDEIG---RDFDVVLSDMAPNTTG 132

Query: 128 ITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLRQGGHLV 187
           I   DA  S          AL E+AL                         VL+ GG  V
Sbjct: 133 IKNVDALKSA---------ALCESALAAAVT--------------------VLKPGGSFV 192

Query: 188 IKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLK 234
            K+ + E    F + +K  F K    +P++TR  SREIY++  S K
Sbjct: 193 CKIFQGEGFDAFIKDVKKYFTKHKIFKPESTRKQSREIYVVGWSKK 200

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BLAST of ClCG09G019630 vs. ExPASy Swiss-Prot
Match: B9LSX2 (Ribosomal RNA large subunit methyltransferase E OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) OX=416348 GN=rlmE PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 68/225 (30.22%), Postives = 109/225 (48.44%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLRNG 67
           D +Y ++++ GY ARSA+KL QI  +  L   G +V+DLG APG WLQVA + +G     
Sbjct: 5   DEYYNKSKQQGYRARSAYKLKQIDEEANLFERGDTVVDLGAAPGGWLQVAAEEVG---ES 64

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSDMCPLVSG 127
           G+V+G+D++++       D  V+T+  D+           +  E+G  V++SDM P ++G
Sbjct: 65  GTVVGVDLQRIDDLD---DHDVETIRGDMTEERTRHYLREAIGERGADVVISDMAPNMTG 124

Query: 128 ITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLRQGGHLV 187
               D   SV L  QA ++A                             + +L  GG  V
Sbjct: 125 EYALDHARSVHLARQAFDVA-----------------------------EELLAPGGDFV 184

Query: 188 IKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL 233
           +K+ + ED   F   ++  F     + P A+R SS E+YL+ + L
Sbjct: 185 VKVFQGEDLDAFREDVRAEFEYLRTVSPPASRDSSSEVYLVAKGL 194

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BLAST of ClCG09G019630 vs. ExPASy Swiss-Prot
Match: Q58771 (Ribosomal RNA large subunit methyltransferase E OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=rlmE PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.3e-21
Identity = 68/224 (30.36%), Postives = 113/224 (50.45%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLRNG 67
           DF+Y+ A++L Y +R++FKL+Q+  +F +I  G  VLDLGCAPG W+QVA + +G   + 
Sbjct: 15  DFYYKLAKKLKYRSRASFKLMQLNEKFNVIKPGKIVLDLGCAPGGWMQVAREIVG---DK 74

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPK-EKGFSVILSDMCPLVS 127
           G V+GID++ VK      D+ V       +    NK++ L P  EK   V++SD  P +S
Sbjct: 75  GFVIGIDLQPVK--PFEYDNVVAIKGDFTLEENLNKIRELIPNDEKKVDVVISDASPNIS 134

Query: 128 GITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLRQGGHL 187
           G    D   S++L   A+ +A                               +L++ G+ 
Sbjct: 135 GYWDIDHARSIDLVTTALQIA-----------------------------TEMLKERGNF 194

Query: 188 VIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQ 231
           V K+   +   ++  ++K  F K    +P+A+R  S E+Y+I +
Sbjct: 195 VAKVFYGDMIDDYVNLVKKYFEKVYITKPQASRKESAEVYVIAK 204

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BLAST of ClCG09G019630 vs. ExPASy Swiss-Prot
Match: A6UUK5 (Ribosomal RNA large subunit methyltransferase E OS=Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3) OX=419665 GN=rlmE PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.0e-21
Identity = 66/225 (29.33%), Postives = 115/225 (51.11%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLRNG 67
           DF+Y+ A++  Y +R+++KLLQ+  +F++I  G +V+DLGCAPG WLQ +   +G     
Sbjct: 15  DFYYKLAKQNHYRSRASYKLLQLNEKFEIIYEGDNVVDLGCAPGGWLQASYDLVG---ED 74

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPK----NKLKSLSPKEKGFSVILSDMCP 127
           G V+G+D++KVK        R + + A   ++ K    NK+  L P +    V++ D  P
Sbjct: 75  GFVIGVDLQKVK------PLREENIVAIQGDMTKKETINKIIDLMPSKA--DVVICDASP 134

Query: 128 LVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLRQG 187
            +SG+   D + S+EL + A+                                  +LR+ 
Sbjct: 135 NISGVWEVDHSRSIELSLMALIAT-----------------------------THLLRKN 194

Query: 188 GHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLI 229
           G+ V+K+ +     ++ ++L   F+K    +PKA+RS S E+Y+I
Sbjct: 195 GNFVVKVFQGSLFDQYVQLLTKYFKKVQTTKPKASRSVSAEVYVI 199

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BLAST of ClCG09G019630 vs. ExPASy TrEMBL
Match: A0A1S3C9F1 (ribosomal RNA large subunit methyltransferase E isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498139 PE=3 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 7.5e-119
Identity = 221/238 (92.86%), Postives = 231/238 (97.06%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGP RNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPK+KLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MCP+VSGITTRDA LSVELGMQAVNLALGEAALGVG+ I GKDKD++DDSTS SDCDGVL
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180

Query: 181 RQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS--LKART 237
           R+GGHLV+KLLESED+QEFSRMLKPLFRK+SWLRPKATRSSSREIYLICQS  L+ART
Sbjct: 181 RKGGHLVLKLLESEDTQEFSRMLKPLFRKSSWLRPKATRSSSREIYLICQSLQLQART 238

[Close]

BLAST of ClCG09G019630 vs. ExPASy TrEMBL
Match: A0A0A0KQZ0 (FtsJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517710 PE=3 SV=1)

HSP 1 Score: 436.0 bits (1120), Expect = 9.8e-119
Identity = 223/238 (93.70%), Postives = 230/238 (96.64%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGP RNGGSVLGIDIKKVKVPH+HCDSRVQTV ADVMNLPK+KLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MCPLVSGITTRDA LSVELGMQAVNLALGEAALGVGD I GKDKD++DDSTS SDCDGVL
Sbjct: 121 MCPLVSGITTRDAALSVELGMQAVNLALGEAALGVGDVIHGKDKDSVDDSTSASDCDGVL 180

Query: 181 RQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS--LKART 237
           RQGGHLV+KLLESED+QEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS  L+ART
Sbjct: 181 RQGGHLVLKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLHLQART 238

[Close]

BLAST of ClCG09G019630 vs. ExPASy TrEMBL
Match: A0A1S3C8U8 (ribosomal RNA large subunit methyltransferase E isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498139 PE=3 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 6.6e-115
Identity = 221/261 (84.67%), Postives = 231/261 (88.51%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGP RNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPK+KLKSLSPKEKGFSVILSD
Sbjct: 61  LGPPRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKSKLKSLSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MCP+VSGITTRDA LSVELGMQAVNLALGEAALGVG+ I GKDKD++DDSTS SDCDGVL
Sbjct: 121 MCPIVSGITTRDAALSVELGMQAVNLALGEAALGVGEVIHGKDKDSIDDSTSASDCDGVL 180

Query: 181 RQGGHLVIKLLESEDSQ-----------------------EFSRMLKPLFRKASWLRPKA 237
           R+GGHLV+KLLESED+Q                       EFSRMLKPLFRK+SWLRPKA
Sbjct: 181 RKGGHLVLKLLESEDTQGRILFPQLFYTWFCLPSQSSFISEFSRMLKPLFRKSSWLRPKA 240

[Close]

BLAST of ClCG09G019630 vs. ExPASy TrEMBL
Match: A0A6J1H9J8 (uncharacterized protein LOC111461336 OS=Cucurbita moschata OX=3662 GN=LOC111461336 PE=3 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.3e-114
Identity = 215/238 (90.34%), Postives = 229/238 (96.22%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGPL+NGGSV+GID+KKVKVPHVHCDSRVQTVCADVMNLPKNKLK+LSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVHCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAIL-GKDK-DNLDDSTSVSDCDG 180
           MCPLVSGITTRDA+LSVELGMQAVNLALGEAAL  GD ++ GK+K DN+DDS  VSD DG
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNLALGEAALSHGDDVMHGKNKEDNVDDSALVSDYDG 180

Query: 181 VLRQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLKART 237
           VL++GGHLVIKLLESED+QEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL+A+T
Sbjct: 181 VLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 238

[Close]

BLAST of ClCG09G019630 vs. ExPASy TrEMBL
Match: A0A6J1JHT1 (uncharacterized protein LOC111487116 OS=Cucurbita maxima OX=3661 GN=LOC111487116 PE=3 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 8.9e-112
Identity = 213/239 (89.12%), Postives = 229/239 (95.82%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAGAPDFFYREAQRLGYVARSAFKLLQIQ QFKLITSGSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQKQFKLITSGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGPL+NGGSV+GID+KKVKVPHV+CDSRVQTVCADVMNLPKNKLK+LSPKEKGFSVILSD
Sbjct: 61  LGPLKNGGSVVGIDLKKVKVPHVYCDSRVQTVCADVMNLPKNKLKALSPKEKGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAA-LGVGDAIL-GKDK-DNLDDSTSVSDCD 180
           MCPLVSGITTRDA+LSVELGMQAVN+ALGEAA L  GD ++ GK+K DN+DDS  VSD D
Sbjct: 121 MCPLVSGITTRDASLSVELGMQAVNMALGEAALLSHGDDVMHGKNKEDNVDDSALVSDYD 180

Query: 181 GVLRQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLKART 237
           GVL++GGHLVIKLLESED+QEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL+A+T
Sbjct: 181 GVLQKGGHLVIKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLQAKT 239

[Close]

BLAST of ClCG09G019630 vs. TAIR 10
Match: AT5G13830.1 (FtsJ-like methyltransferase family protein )

HSP 1 Score: 323.2 bits (827), Expect = 1.8e-88
Identity = 166/233 (71.24%), Postives = 189/233 (81.12%), Query Frame = 0


Query: 1   MSGAGAPDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQS 60
           MSGAG PDFFYREAQRLGYVARSAFKLLQIQ Q+KLI  GSSVLDLGCAPGAWLQVACQS
Sbjct: 1   MSGAGVPDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQS 60

Query: 61  LGPLRNGGSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVILSD 120
           LGPLR+GG V+G+DIKKVKVP   CDSRVQT+ ADV+N P+ K++ LSP++ GFSVILSD
Sbjct: 61  LGPLRSGGIVVGMDIKKVKVP-PQCDSRVQTIAADVLNFPRQKIRELSPQQLGFSVILSD 120

Query: 121 MCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVL 180
           MC  VSGITTRDA LS ELGM+A++LA+G+AA+            N DD        GVL
Sbjct: 121 MCHSVSGITTRDAALSAELGMRALDLAVGQAAI--------SQSPNDDDGGPNESRPGVL 180

Query: 181 RQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSLK 234
           R GGHLVIKLLESED+Q+F+R+ KP+F KASWLRPKATR SSREIYLICQ  +
Sbjct: 181 RHGGHLVIKLLESEDAQDFARICKPIFNKASWLRPKATRPSSREIYLICQGFR 224

[Close]

BLAST of ClCG09G019630 vs. TAIR 10
Match: AT4G25730.1 (FtsJ-like methyltransferase family protein )

HSP 1 Score: 83.2 bits (204), Expect = 3.1e-16
Identity = 66/223 (29.60%), Postives = 105/223 (47.09%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPLRNG 67
           D +YR A+  G+ +R+++KLLQ+  ++ L+ S  +VLDL  APG W+QVA + + P+  G
Sbjct: 11  DKYYRLAKERGFRSRASYKLLQLDAKYSLLHSAHAVLDLCAAPGGWMQVAVEKV-PV--G 70

Query: 68  GSVLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKE--KGFSVILSDMCPLV 127
             VLGID+  + +P   C +  Q +        K+K+K +  +     F+++L D  P V
Sbjct: 71  SLVLGIDLVPI-LPVRGCVTMTQDITRTEC---KSKIKQVMEQHGVSAFNLVLHDGSPNV 130

Query: 128 SGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDGVLRQGGH 187
            G   ++A     L + +V LA                                L + G+
Sbjct: 131 GGAWAQEAMSQNALVIDSVRLA-----------------------------TEFLARNGN 190

Query: 188 LVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLI 229
           LV K+  S D       L  LF K    +P A+RS+S E YL+
Sbjct: 191 LVTKVFRSRDYNSVLYCLGRLFEKVEVFKPPASRSASAETYLV 197

[Close]

BLAST of ClCG09G019630 vs. TAIR 10
Match: AT5G01230.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 6.1e-12
Identity = 55/233 (23.61%), Postives = 102/233 (43.78%), Query Frame = 0


Query: 8   DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLG-PLRN 67
           D +YR+A+  G+ ARSAFKLLQI  +F +      V+DL  APG+W QV  + L  P ++
Sbjct: 10  DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQVLSRQLYLPAKS 69

Query: 68  GGS--------VLGIDIKKVKVPHVHCDSRVQTVCADVMNLPKNKLKSLSPKEKGFSVIL 127
                      ++ ID++    P    +  +Q V  D+ N    ++           +++
Sbjct: 70  SAESKDGDLPLIVAIDLQ----PMAPIEGVIQ-VQGDITNARTAEVVIRHFDGCKADLVV 129

Query: 128 SDMCPLVSGITTRDATLSVELGMQAVNLALGEAALGVGDAILGKDKDNLDDSTSVSDCDG 187
            D  P V+G+   D  +  +L +  + +                                
Sbjct: 130 CDGAPDVTGLHDMDEFVQSQLILAGLTIV-----------------------------TH 189

Query: 188 VLRQGGHLVIKLLESEDSQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQS 232
           +L++GG  + K+   +D+      LK  F   ++ +PK++R+SS E + +C++
Sbjct: 190 ILKEGGKFIAKIFRGKDTSLLYCQLKLFFPTVTFAKPKSSRNSSIEAFAVCEN 208

[Close]

BLAST of ClCG09G019630 vs. TAIR 10
Match: AT5G01230.2 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein )

HSP 1 Score: 52.0 bits (123), Expect = 7.7e-07
Identity = 24/48 (50.00%), Postives = 32/48 (66.67%), Query Frame = 0


Query: 8  DFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQ 56
          D +YR+A+  G+ ARSAFKLLQI  +F +      V+DL  APG+W Q
Sbjct: 10 DIYYRKAKEEGWRARSAFKLLQIDEEFNIFEGVKRVVDLCAAPGSWSQ 57

The following BLAST results are available for this feature:

BLAST of ClCG09G019630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889598.1	4.4e-121	95.76	ribosomal RNA large subunit methyltransferase E isoform X1 [Benincasa hispida]	[more]
XP_008458862.1	1.5e-118	92.86	PREDICTED: ribosomal RNA large subunit methyltransferase E isoform X3 [Cucumis m...	[more]
XP_004142767.1	2.0e-118	93.70	uncharacterized protein LOC101216412 isoform X2 [Cucumis sativus] >KGN51324.1 hy...	[more]
XP_008458861.1	1.4e-114	84.67	PREDICTED: ribosomal RNA large subunit methyltransferase E isoform X1 [Cucumis m...	[more]
KAG6602386.1	6.7e-114	89.92	hypothetical protein SDJN03_07619, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of ClCG09G019630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8ZT18	8.8e-24	32.34	Ribosomal RNA large subunit methyltransferase E OS=Desulfococcus oleovorans (str...	[more]
B8FL12	7.4e-23	33.19	Ribosomal RNA large subunit methyltransferase E OS=Desulfatibacillum aliphaticiv...	[more]
B9LSX2	1.1e-21	30.22	Ribosomal RNA large subunit methyltransferase E OS=Halorubrum lacusprofundi (str...	[more]
Q58771	5.3e-21	30.36	Ribosomal RNA large subunit methyltransferase E OS=Methanocaldococcus jannaschii...	[more]
A6UUK5	7.0e-21	29.33	Ribosomal RNA large subunit methyltransferase E OS=Methanococcus aeolicus (strai...	[more]

BLAST of ClCG09G019630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C9F1	7.5e-119	92.86	ribosomal RNA large subunit methyltransferase E isoform X3 OS=Cucumis melo OX=36...	[more]
A0A0A0KQZ0	9.8e-119	93.70	FtsJ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517710 PE=3 S...	[more]
A0A1S3C8U8	6.6e-115	84.67	ribosomal RNA large subunit methyltransferase E isoform X1 OS=Cucumis melo OX=36...	[more]
A0A6J1H9J8	4.3e-114	90.34	uncharacterized protein LOC111461336 OS=Cucurbita moschata OX=3662 GN=LOC1114613...	[more]
A0A6J1JHT1	8.9e-112	89.12	uncharacterized protein LOC111487116 OS=Cucurbita maxima OX=3661 GN=LOC111487116...	[more]

BLAST of ClCG09G019630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13830.1	1.8e-88	71.24	FtsJ-like methyltransferase family protein	[more]
AT4G25730.1	3.1e-16	29.60	FtsJ-like methyltransferase family protein	[more]
AT5G01230.1	6.1e-12	23.61	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]
AT5G01230.2	7.7e-07	50.00	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 15..236 e-value: 1.9E-51 score: 176.5
None	No IPR available	PANTHER	PTHR10920:SF18	RRNA METHYLTRANSFERASE 2, MITOCHONDRIAL	coord: 5..234
None	No IPR available	PANTHER	PTHR10920	RIBOSOMAL RNA METHYLTRANSFERASE	coord: 5..234
None	No IPR available	CDD	cd02440	AdoMet_MTases	coord: 43..122 e-value: 0.00781545 score: 33.1723
IPR015507	Ribosomal RNA large subunit methyltransferase E	PIRSF	PIRSF005461	23S_rRNA_mtase	coord: 166..236 e-value: 1.2E-11 score: 42.4 coord: 3..161 e-value: 1.6E-35 score: 120.5
IPR015507	Ribosomal RNA large subunit methyltransferase E	HAMAP	MF_01547	RNA_methyltr_E	coord: 3..233 score: 28.758099
IPR002877	Ribosomal RNA methyltransferase FtsJ domain	PFAM	PF01728	FtsJ	coord: 19..230 e-value: 9.5E-45 score: 152.9
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 8..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G019630.2	ClCG09G019630.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0032259	methylation
biological_process	GO:0001510	RNA methylation
molecular_function	GO:0008650	rRNA (uridine-2'-O-)-methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity