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ClCG09G019250 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATTCTCCAAAAAGTCTCAAATCGATGGCGGATTTGAAGCAGAGGGAAAAAAATGGGTAATCGCCGGGTTGCCGCCAAGGTCATCGTTGAAGCCGATTAACACAAAATCGAAGGCGAAAGACGGCGACGACGACGGCGAGAAGACTCCGACGGCGAAAGAAGCTAGAATACCGGAGAAACTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAAAATCATATGAGGGAGTTCTTTAATCCTCCTGATTTAGAATCTGTGTTCAAGCTTCGAGTTTAA ATGGGATTCTCCAAAAAGTCTCAAATCGATGGCGGATTTGAAGCAGAGGGAAAAAAATGGGTAATCGCCGGGTTGCCGCCAAGGTCATCGTTGAAGCCGATTAACACAAAATCGAAGGCGAAAGACGGCGACGACGACGGCGAGAAGACTCCGACGGCGAAAGAAGCTAGAATACCGGAGAAACTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAAAATCATATGAGGGAGTTCTTTAATCCTCCTGATTTAGAATCTGTGTTCAAGCTTCGAGTTTAA ATGGGATTCTCCAAAAAGTCTCAAATCGATGGCGGATTTGAAGCAGAGGGAAAAAAATGGGTAATCGCCGGGTTGCCGCCAAGGTCATCGTTGAAGCCGATTAACACAAAATCGAAGGCGAAAGACGGCGACGACGACGGCGAGAAGACTCCGACGGCGAAAGAAGCTAGAATACCGGAGAAACTGGGTTGCCCGCCGGCGCCGAGAAAGCGTAGATCTCTAAAATCAAGCTCTAATCAAAATCATATGAGGGAGTTCTTTAATCCTCCTGATTTAGAATCTGTGTTCAAGCTTCGAGTTTAA MGFSKKSQIDGGFEAEGKKWVIAGLPPRSSLKPINTKSKAKDGDDDGEKTPTAKEARIPEKLGCPPAPRKRRSLKSSSNQNHMREFFNPPDLESVFKLRV Homology
BLAST of ClCG09G019250 vs. NCBI nr
Match: XP_038890813.1 (cyclin-dependent protein kinase inhibitor SMR6 [Benincasa hispida]) HSP 1 Score: 194.1 bits (492), Expect = 5.7e-46 Identity = 95/100 (95.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of ClCG09G019250 vs. NCBI nr
Match: XP_008458799.1 (PREDICTED: uncharacterized protein LOC103498100 [Cucumis melo] >KAA0037576.1 uncharacterized protein E6C27_scaffold277G002090 [Cucumis melo var. makuwa] >TYK03096.1 uncharacterized protein E5676_scaffold374G00180 [Cucumis melo var. makuwa]) HSP 1 Score: 185.3 bits (469), Expect = 2.6e-43 Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of ClCG09G019250 vs. NCBI nr
Match: XP_004142790.1 (cyclin-dependent protein kinase inhibitor SMR6 [Cucumis sativus] >KGN51361.1 hypothetical protein Csa_008029 [Cucumis sativus]) HSP 1 Score: 183.0 bits (463), Expect = 1.3e-42 Identity = 90/100 (90.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of ClCG09G019250 vs. NCBI nr
Match: XP_023550994.1 (cyclin-dependent protein kinase inhibitor SMR6 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 181.0 bits (458), Expect = 5.0e-42 Identity = 92/104 (88.46%), Postives = 94/104 (90.38%), Query Frame = 0
BLAST of ClCG09G019250 vs. NCBI nr
Match: KAG7016206.1 (Cyclin-dependent protein kinase inhibitor SMR6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 179.5 bits (454), Expect = 1.4e-41 Identity = 91/104 (87.50%), Postives = 94/104 (90.38%), Query Frame = 0
BLAST of ClCG09G019250 vs. ExPASy Swiss-Prot
Match: Q29Q81 (Cyclin-dependent protein kinase inhibitor SMR6 OS=Arabidopsis thaliana OX=3702 GN=SMR6 PE=1 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 3.5e-22 Identity = 62/113 (54.87%), Postives = 77/113 (68.14%), Query Frame = 0
BLAST of ClCG09G019250 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 6.6e-13 Identity = 51/107 (47.66%), Postives = 64/107 (59.81%), Query Frame = 0
BLAST of ClCG09G019250 vs. ExPASy Swiss-Prot
Match: Q9SAD3 (Cyclin-dependent protein kinase inhibitor SMR8 OS=Arabidopsis thaliana OX=3702 GN=SMR8 PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.5e-12 Identity = 46/104 (44.23%), Postives = 57/104 (54.81%), Query Frame = 0
BLAST of ClCG09G019250 vs. ExPASy Swiss-Prot
Match: Q9LVX6 (Cyclin-dependent protein kinase inhibitor SMR7 OS=Arabidopsis thaliana OX=3702 GN=SMR7 PE=2 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 3.1e-10 Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 0
BLAST of ClCG09G019250 vs. ExPASy Swiss-Prot
Match: F4IWB3 (Cyclin-dependent protein kinase inhibitor SMR13 OS=Arabidopsis thaliana OX=3702 GN=SMR13 PE=4 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 6.6e-05 Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 0
BLAST of ClCG09G019250 vs. ExPASy TrEMBL
Match: A0A5D3BY33 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00180 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43 Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of ClCG09G019250 vs. ExPASy TrEMBL
Match: A0A1S3C883 (uncharacterized protein LOC103498100 OS=Cucumis melo OX=3656 GN=LOC103498100 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.3e-43 Identity = 91/100 (91.00%), Postives = 94/100 (94.00%), Query Frame = 0
BLAST of ClCG09G019250 vs. ExPASy TrEMBL
Match: A0A0A0KUE2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523070 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 6.3e-43 Identity = 90/100 (90.00%), Postives = 93/100 (93.00%), Query Frame = 0
BLAST of ClCG09G019250 vs. ExPASy TrEMBL
Match: A0A6J1JVL3 (cyclin-dependent protein kinase inhibitor SMR6-like OS=Cucurbita maxima OX=3661 GN=LOC111489273 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 7.7e-41 Identity = 90/104 (86.54%), Postives = 94/104 (90.38%), Query Frame = 0
BLAST of ClCG09G019250 vs. ExPASy TrEMBL
Match: A0A6J1FHD8 (cyclin-dependent protein kinase inhibitor SMR6 OS=Cucurbita moschata OX=3662 GN=LOC111445393 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 7.7e-41 Identity = 90/104 (86.54%), Postives = 93/104 (89.42%), Query Frame = 0
BLAST of ClCG09G019250 vs. TAIR 10
Match: AT5G40460.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 105.5 bits (262), Expect = 2.5e-23 Identity = 62/113 (54.87%), Postives = 77/113 (68.14%), Query Frame = 0
BLAST of ClCG09G019250 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 74.7 bits (182), Expect = 4.7e-14 Identity = 51/107 (47.66%), Postives = 64/107 (59.81%), Query Frame = 0
BLAST of ClCG09G019250 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 73.6 bits (179), Expect = 1.0e-13 Identity = 46/104 (44.23%), Postives = 57/104 (54.81%), Query Frame = 0
BLAST of ClCG09G019250 vs. TAIR 10
Match: AT3G27630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40460.1); Has 36 Blast hits to 36 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 2.2e-11 Identity = 40/98 (40.82%), Postives = 54/98 (55.10%), Query Frame = 0
BLAST of ClCG09G019250 vs. TAIR 10
Match: AT3G20898.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51355.1); Has 66 Blast hits to 66 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 4.7e-06 Identity = 23/47 (48.94%), Postives = 31/47 (65.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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