ClCG09G018730 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG09G018730
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionWAT1-related protein
LocationCG_Chr09: 35980377 .. 35981730 (-)
RNA-Seq ExpressionClCG09G018730
SyntenyClCG09G018730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATACCTATTTGAGTTTTGTGAACTCTACTATCAATTAGTCGTAAAAAAAATAATTTATGTATTTTATAAAGAATGTAAGAATTGTCAACGTTGGACTAACAAATTTGACAGGCCATATTTGGTAGTGTGGTTCGTATTGGAGTCCATGTATGGTGTTTGGAAAGGAAAGGGCCAGTTTATGTTGCAATGTTCAAGCCCCTTGGCATGGTCGTCGCCATCCCCTTGGTTGTCATCTTTCTTCATGAACCGCTTTATCTTGGCAGGTCTTTAAACTCTCCAACCCCTCCACATTTTCTTCCTCCATTTTAGTTTTTGTTTGATTTTTAAGTTTCTAGATAATCTCACATTTTTAGTCTTTAAATTTAGAGTCTAGTTTCTATTTAATCTTTAGATTGCAAAATATTACAATTTGAATTTTATTTTAATTTGGTCCCTAAGTTTCAAAATTTACATTCTTAACCTTGATTTTTCACTAATTACTCATTTTTTTGTCTTTTGTGGTAATGTCTATTAATTAATTCAAGAAGAATAATTAATTAAGTTTCATTATTTTTTTTTTATCATTATTAAATTAAATTTTAAAATTTTACTTCATAATTATGTTTAATTAATTAATAAAGATTAACACCAAAGATTGAAAATGAGTATTTAATAAAAAAAATTTAAGACTAAAAATATAGCTTTTGAAACTTAGGGATTAAATTAAAACAAAACTCAAATCTCAAAGAGTAAAATTGTAACATTTAATCCAAAAACTAAATTGAAATCAAACTTAAAACTAAAAAACTATATTTAGCTTATAGTTTTCTTGTCTTTATTTTACAATCTTTTGCTTTTCTTCTGTTTACTTGCTGTATACTTAGCTTTTTTCTTTTTTTCTTTTTTTTTTTCTCTCTCGTTTAGTCAATAAATTATTAAATTTTAAAAAATGTAATAAATTATTAATGGGACTCTTTTCAAATATAACAAAAATAACTAAAATATTTATTAATATAGCAAAATACACTATTTTTCTGCGATAAACCCCGATAGGTTGGGATAGATTATTATTTGTGTCCATTGTAACATAGATAGTAGTCTATTGCAGATAAATAGTGAAATTTTGATATTAGTTGCAAATATTTTGAGCAGTTTTATCATTTAAGATAATTTATCTTTTTGTAGAATGTATGTATGGGTGACAAAAATATTTTGTTGTTGAAAATTGGCAGTGTGATGGGTTCGATTGTGATTGGGTGTGGATTTTATAGTGTGATATGGGGGCAGATGAAACAACTAGACTTGGCCATGGCCTTACCTTCTTCTACTTCTGAATCACCATCTGCCTCGCTCTTGCTTCACCAACACTCTTAA

mRNA sequence

AATACCTATTTGAGTTTTGTGAACTCTACTATCAATTAGTCGTAAAAAAAATAATTTATGTATTTTATAAAGAATGTAAGAATTGTCAACGTTGGACTAACAAATTTGACAGGCCATATTTGGTAGTGTGGTTCGTATTGGAGTCCATGTATGGTGTTTGGAAAGGAAAGGGCCAGTTTATGTTGCAATGTTCAAGCCCCTTGGCATGGTCGTCGCCATCCCCTTGGTTGTCATCTTTCTTCATGAACCGCTTTATCTTGGCAGTGTGATATGGGGGCAGATGAAACAACTAGACTTGGCCATGGCCTTACCTTCTTCTACTTCTGAATCACCATCTGCCTCGCTCTTGCTTCACCAACACTCTTAA

Coding sequence (CDS)

ATGTTCAAGCCCCTTGGCATGGTCGTCGCCATCCCCTTGGTTGTCATCTTTCTTCATGAACCGCTTTATCTTGGCAGTGTGATATGGGGGCAGATGAAACAACTAGACTTGGCCATGGCCTTACCTTCTTCTACTTCTGAATCACCATCTGCCTCGCTCTTGCTTCACCAACACTCTTAA

Protein sequence

MFKPLGMVVAIPLVVIFLHEPLYLGSVIWGQMKQLDLAMALPSSTSESPSASLLLHQHS
Homology
[Close]
BLAST of ClCG09G018730 vs. NCBI nr
Match: XP_031741104.1 (WAT1-related protein At3g28050 isoform X2 [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-10
Identity = 47/77 (61.04%), Postives = 51/77 (66.23%), Query Frame = 0 

Query: 1   MFKPLGMVVAIPLVVIFLHEPLYLGS-------------VIWGQMKQLDLAMALPSSTS- 60
           MFKPLGMVVAIPLVV FLHEPLYLGS             VIWGQ+K+LDL +   +S S 
Sbjct: 273 MFKPLGMVVAIPLVVTFLHEPLYLGSVIGSIVIGCGFYCVIWGQIKRLDLTLLSSASHSQ 332

[Close]
BLAST of ClCG09G018730 vs. NCBI nr
Match: XP_004142470.3 (WAT1-related protein At5g40210 isoform X1 [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 1.3e-10
Identity = 47/77 (61.04%), Postives = 51/77 (66.23%), Query Frame = 0 

Query: 1   MFKPLGMVVAIPLVVIFLHEPLYLGS-------------VIWGQMKQLDLAMALPSSTS- 60
           MFKPLGMVVAIPLVV FLHEPLYLGS             VIWGQ+K+LDL +   +S S 
Sbjct: 285 MFKPLGMVVAIPLVVTFLHEPLYLGSVIGSIVIGCGFYCVIWGQIKRLDLTLLSSASHSQ 344

[Close]
BLAST of ClCG09G018730 vs. NCBI nr
Match: XP_008458741.1 (PREDICTED: WAT1-related protein At3g28050-like isoform X1 [Cucumis melo] >XP_016902311.1 PREDICTED: WAT1-related protein At3g28050-like isoform X1 [Cucumis melo])

HSP 1 Score: 74.7 bits (182), Expect = 3.0e-10
Identity = 47/76 (61.84%), Postives = 50/76 (65.79%), Query Frame = 0 

Query: 1   MFKPLGMVVAIPLVVIFLHEPLYLGS-------------VIWGQMKQLDLAMALPSSTS- 60
           MFKPLGMVVAIPLVV FLHEPLYLGS             VIWGQ+KQLDL +   +S S 
Sbjct: 286 MFKPLGMVVAIPLVVTFLHEPLYLGSVIGSIVIGCGFYCVIWGQIKQLDLTLLSSTSHSQ 345

[Close]
BLAST of ClCG09G018730 vs. NCBI nr
Match: KAA0037481.1 (WAT1-related protein [Cucumis melo var. makuwa] >TYK01957.1 WAT1-related protein [Cucumis melo var. makuwa])

HSP 1 Score: 74.7 bits (182), Expect = 3.0e-10
Identity = 47/76 (61.84%), Postives = 50/76 (65.79%), Query Frame = 0 

Query: 1   MFKPLGMVVAIPLVVIFLHEPLYLGS-------------VIWGQMKQLDLAMALPSSTS- 60
           MFKPLGMVVAIPLVV FLHEPLYLGS             VIWGQ+KQLDL +   +S S 
Sbjct: 58  MFKPLGMVVAIPLVVTFLHEPLYLGSVIGSIVIGCGFYCVIWGQIKQLDLTLLSSTSHSQ 117

[Close]
BLAST of ClCG09G018730 vs. NCBI nr
Match: XP_038889703.1 (WAT1-related protein At3g28050-like isoform X2 [Benincasa hispida])

HSP 1 Score: 64.3 bits (155), Expect = 4.0e-07
Identity = 45/75 (60.00%), Postives = 46/75 (61.33%), Query Frame = 0 

Query: 1   MFKPLGMVVAIPLVVIFLHEPLYLG-------------SVIWGQMKQLDLAMALPSST-- 55
           MFKPLGMVVAIPLVV FL EPLYLG             SVIWGQ+KQ DL   LPSST  
Sbjct: 260 MFKPLGMVVAIPLVVTFLQEPLYLGSVMGSIVITCGFYSVIWGQIKQQDL--ILPSSTSH 319

[Close]
BLAST of ClCG09G018730 vs. ExPASy TrEMBL
Match: A0A0A0KRZ3 (WAT1-related protein OS=Cucumis sativus OX=3659 GN=Csa_5G630920 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.4e-11
Identity = 47/77 (61.04%), Postives = 51/77 (66.23%), Query Frame = 0 

Query: 1   MFKPLGMVVAIPLVVIFLHEPLYLGS-------------VIWGQMKQLDLAMALPSSTS- 60
           MFKPLGMVVAIPLVV FLHEPLYLGS             VIWGQ+K+LDL +   +S S 
Sbjct: 274 MFKPLGMVVAIPLVVTFLHEPLYLGSVIGSIVIGCGFYCVIWGQIKRLDLTLLSSASHSQ 333

[Close]
BLAST of ClCG09G018730 vs. ExPASy TrEMBL
Match: A0A1S3C948 (WAT1-related protein OS=Cucumis melo OX=3656 GN=LOC103498057 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-10
Identity = 47/76 (61.84%), Postives = 50/76 (65.79%), Query Frame = 0 

Query: 1   MFKPLGMVVAIPLVVIFLHEPLYLGS-------------VIWGQMKQLDLAMALPSSTS- 60
           MFKPLGMVVAIPLVV FLHEPLYLGS             VIWGQ+KQLDL +   +S S 
Sbjct: 286 MFKPLGMVVAIPLVVTFLHEPLYLGSVIGSIVIGCGFYCVIWGQIKQLDLTLLSSTSHSQ 345

[Close]
BLAST of ClCG09G018730 vs. ExPASy TrEMBL
Match: A0A5A7T7C7 (WAT1-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00490 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-10
Identity = 47/76 (61.84%), Postives = 50/76 (65.79%), Query Frame = 0 

Query: 1   MFKPLGMVVAIPLVVIFLHEPLYLGS-------------VIWGQMKQLDLAMALPSSTS- 60
           MFKPLGMVVAIPLVV FLHEPLYLGS             VIWGQ+KQLDL +   +S S 
Sbjct: 58  MFKPLGMVVAIPLVVTFLHEPLYLGSVIGSIVIGCGFYCVIWGQIKQLDLTLLSSTSHSQ 117

[Close]
BLAST of ClCG09G018730 vs. ExPASy TrEMBL
Match: A0A6J1FNQ6 (WAT1-related protein OS=Cucurbita moschata OX=3662 GN=LOC111445562 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-07
Identity = 42/73 (57.53%), Postives = 47/73 (64.38%), Query Frame = 0 

Query: 1   MFKPLGMVVAIPLVVIFLHEPLYLG-------------SVIWGQMKQLDLAMAL-PSSTS 60
           MFKPLGMV+A+ L V FL E L LG             SVIWGQ+KQL+L + L P STS
Sbjct: 280 MFKPLGMVIAVALAVSFLRESLCLGSVIGSVVIGCGFYSVIWGQIKQLELDLDLPPPSTS 339

[Close]
BLAST of ClCG09G018730 vs. ExPASy TrEMBL
Match: A0A6J1FGV1 (WAT1-related protein OS=Cucurbita moschata OX=3662 GN=LOC111445562 PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-07
Identity = 42/73 (57.53%), Postives = 47/73 (64.38%), Query Frame = 0 

Query: 1   MFKPLGMVVAIPLVVIFLHEPLYLG-------------SVIWGQMKQLDLAMAL-PSSTS 60
           MFKPLGMV+A+ L V FL E L LG             SVIWGQ+KQL+L + L P STS
Sbjct: 280 MFKPLGMVIAVALAVSFLRESLCLGSVIGSVVIGCGFYSVIWGQIKQLELDLDLPPPSTS 339

The following BLAST results are available for this feature:
BLAST of ClCG09G018730 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031741104.11.3e-1061.04WAT1-related protein At3g28050 isoform X2 [Cucumis sativus][more]
XP_004142470.31.3e-1061.04WAT1-related protein At5g40210 isoform X1 [Cucumis sativus][more]
XP_008458741.13.0e-1061.84PREDICTED: WAT1-related protein At3g28050-like isoform X1 [Cucumis melo] >XP_016... [more]
KAA0037481.13.0e-1061.84WAT1-related protein [Cucumis melo var. makuwa] >TYK01957.1 WAT1-related protein... [more]
XP_038889703.14.0e-0760.00WAT1-related protein At3g28050-like isoform X2 [Benincasa hispida][more]
BLAST of ClCG09G018730 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG09G018730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRZ36.4e-1161.04WAT1-related protein OS=Cucumis sativus OX=3659 GN=Csa_5G630920 PE=3 SV=1[more]
A0A1S3C9481.4e-1061.84WAT1-related protein OS=Cucumis melo OX=3656 GN=LOC103498057 PE=3 SV=1[more]
A0A5A7T7C71.4e-1061.84WAT1-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808... [more]
A0A6J1FNQ61.9e-0757.53WAT1-related protein OS=Cucurbita moschata OX=3662 GN=LOC111445562 PE=3 SV=1[more]
A0A6J1FGV11.9e-0757.53WAT1-related protein OS=Cucurbita moschata OX=3662 GN=LOC111445562 PE=3 SV=1[more]
BLAST of ClCG09G018730 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G018730.1ClCG09G018730.1mRNA