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ClCG09G018340 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAGAAAAAAATGTCGGCTTAATTTTCAAGTTTCAGCTCGGCCCCCTCCTCTTCTTCTCACTGAGCTTCAAACAGGTACGCCATCACAAAATCTTCCATTAATTTTTTACCTTTTCTTTTTATTTTCATGTCTTTCATTTCAATTTCTATGTTTCTATCTCTTCCTTTGATTATTTTGGCCAATGGGCTTGTTTTAGGTTTCCATTTCAAGATCTGGGTTGTGGATTAACTTAGGGAATTTCTTTAAATTTTTCATCTTTTTTGTGTAATTGACTTGCTCTTGCTTGTAATTTCCCCCTTTTCTACATACCCTTTTGCTCAAATATTCTGGGAATCTCTCATTCTTTCCTTTTTCTTCACTTTTCTTCAATGTTCATATTCTCTCCCTTTAACCAGCTGCATTGCTTTTACCATAGAGACTTAGTTCTATAATGGATTTATAAGAATTCACAATTGTATATATTTATCTTAACCTAGAAGTAACACTTTTGAGATAAGCCTGCAAGTGATAAATTATAACTTTGGACCATTAATTATTATTATGGATGTCAGAGTCATCATACACCAAGTTGGAACTTTTTTTGTTTGGGGGTAAAAGGTGCTGAAAAGAAAAGAGAAAAGGCTGATTTTTATGAATATGTGAAGTGTAGGGCTAATTGGTATTTCAGTTTTTTCTAAACAAGCTGGTGAAAGATTGTTTTGTTTTGGTATCAAACTCCCCAGGTTTTTTGCTCCAATTCAAGTTTTCAACATCGTAATAGCTGTGTGAAACAATGTATAGTGGGGGTTATACTGCTGAAGTTACAAGCTTGTCACCTAAAGCCACAGAGAATGATGTTTATGATTTTTTCTGTCATTGTGGCGCGGTCGAGCACGTAGAAATCCTCAGGTGAATTAAACATAAATCCCCTGGCTTCATGGTTTGTTACATTTTGTAATCAATCATATATGAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCAGTTTCAGTTTCATCAACTCCAATGAGAAGCGTCTCTATCTTGTCATAGATTTACACTGAATTATGAGATCTTACATAGGAACTTATTGAAGCTTCGATAATCAATAAATGAACTTCATATTCATTATTGCTGTTGTGATTAGTAGTTAAAAGAAGAGTGAACTTTTCAGAAATGCTAAAGAGAGTAAACTGGACTGATGATGAGTCTGCCTCTGAAGTCTAGATTGATTTTTTAGTATGCTGCAATTTCAATTAGCTGTAAAACCAAGCTACTTGAAAATGTTCTCTCTTTTGCGATAACAGATCGGGCGATTATGCATGTACTGCTTATGTGACCTTCCGAGATGCTTTTGCTCTGGAAACTGCTATACTGCTTAGTGTAAGTTCTTGAGGATTATTTGATTATGGTTGACTTGTGATTCTTCTCTGCTCCTTAATTTTGTAATCATAGATTTCTGTACAGTACTTTCCTTTTGTTTCTGCTCGCTTGTATTTGTTTCGATGATGTATGTAAACACACTAATACACTCTTGGATGAGGAGGAGATGGCCTTTGCAGAAGGATGATGTGCATAAATCAAGAAATGGTTCGAATCCTAGGCTTGAGAAGTTACAGTTTCATTTTTAGAGTCTTTCAATTTCTTGCTTTTAAAGAAAGTTGTGTAGATGCCTCGTTGTTCCTTTCTTTTTCAACATATTTGAGTTTCTCCAACATATTTGAGATTCTTCTGTGCTCTTTCATTTTGCAATGGCTTGCTTCTCTCCTTTTTACTTGATCAATCATAGATTTGTGTAGAGTACTTTCCTTTTGTTTCTGCTCGCTTGCGTGTCCTGTGATGATGTATGTAAACACACAAATACACTCTTTTAGGGTGAGTGGATGAGGAGGAGATGGCCTTTGTGGAAGGATGACGTGCAGGTATCGAGAAATGGTTCAAATCCTAGGCTTGGGATGTTACAATTTCCTTTTTAGAGTCTATCAATCTCTTGCTTTTAAAGAAAGTTGTGTACATGCCTCTTTGTTTCTTTCTTTTTCAACATATTTTTCTCCACCTTACTCAATATGCAATTACTTAAATTTGCAAGAATTTGAGGGAAAATCATTTGAATCACTTTCCATTTGTACTTTCAAATTAGTTGTTTTCAAACATCTCTTGTAAGCTTTCACATTGCAGTTCATTTTACTGATTTTGATGTTCCAGGGGGCTGAAATCTTAGATCAATGTGTGTTCATATCACGGTGGGGAACATACATAGACGAATCAGACACTTGGAACAGCCATTCACAAATGGCCAACGACAATACAAGTTTAATGGTAAGGGTAAATAGATAGGCACTCGTTCTTTAAAGGCATTGACATGTCGTAACTCATCCCAGGCCTAGCTACTCGCTAAATCTTGCTTCGTTGTTGGTCTTCTGGTTTGTACACAATATTTTGAATTGATCCCTTCAAGTTTCTCTCTATGGAAATCAGGTGACAGAAATAATGCATTCTGTTCACACACCAGGGGAGGCTGTAACTATGGCTCAACAAGTTGTGAAAACAATGCTATCAAAGGGATATGTTTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCAAAAGTTTATGACCTTAGCAATAGGATTGGACTCACTGAGACAATTCATGCTGGCATGGAAACCGTTAAGTACATCGATGAGAAGTTTCACGTTTCCAATATCACCAGATCCGCTGCAGCAGTAACTGGAACAGCAGCTGTGGTGGCGGTGACGGTAACGGGTAAAGTGGCGATGGCAGCAGGTAATGCTGTAATAAACAGCAGCTACTTTTCGAAGGGCGCGCTTTGGGTTTCGGATATGTTGAGTCGTGCTGCTAAGGCTGCAGCTGAAGTAGGTAAGAATAGCAGTAAATGAAAGAAAAGAAAGAAAAAAACTTTGAATCAAATAAACAAAAATAACTTTCATTCTTTAGCCTCATCATGAAAAATATAAATGTCAAGTTTTTTCTTGTTGTTTTCACTCCAAATCAGAATCTTCATGTGCATCTTGGTATGATTATAAGTAATCATCACAATCCTGATTTTGTAAATCTTGTTCAGGT AAAAAAAAAAAGAAAAAAATGTCGGCTTAATTTTCAAGTTTCAGCTCGGCCCCCTCCTCTTCTTCTCACTGAGCTTCAAACAGGTTTTTTGCTCCAATTCAAGTTTTCAACATCGTAATAGCTGTGTGAAACAATGTATAGTGGGGGTTATACTGCTGAAGTTACAAGCTTGTCACCTAAAGCCACAGAGAATGATGTTTATGATTTTTTCTGTCATTGTGGCGCGGTCGAGCACGTAGAAATCCTCAGATCGGGCGATTATGCATGTACTGCTTATGTGACCTTCCGAGATGCTTTTGCTCTGGAAACTGCTATACTGCTTAGTGGTGAGTGGATGAGGAGGAGATGGCCTTTGTGGAAGGATGACGTGCAGGGGGCTGAAATCTTAGATCAATGTGTGTTCATATCACGGTGGGGAACATACATAGACGAATCAGACACTTGGAACAGCCATTCACAAATGGCCAACGACAATACAAGTTTAATGGTGACAGAAATAATGCATTCTGTTCACACACCAGGGGAGGCTGTAACTATGGCTCAACAAGTTGTGAAAACAATGCTATCAAAGGGATATGTTTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCAAAAGTTTATGACCTTAGCAATAGGATTGGACTCACTGAGACAATTCATGCTGGCATGGAAACCGTTAAGTACATCGATGAGAAGTTTCACGTTTCCAATATCACCAGATCCGCTGCAGCAGTAACTGGAACAGCAGCTGTGGTGGCGGTGACGGTAACGGGTAAAGTGGCGATGGCAGCAGGTAATGCTGTAATAAACAGCAGCTACTTTTCGAAGGGCGCGCTTTGGGTTTCGGATATGTTGAGTCGTGCTGCTAAGGCTGCAGCTGAAGTAGGTAAGAATAGCAGTAAATGAAAGAAAAGAAAGAAAAAAACTTTGAATCAAATAAACAAAAATAACTTTCATTCTTTAGCCTCATCATGAAAAATATAAATGTCAAGTTTTTTCTTGTTGTTTTCACTCCAAATCAGAATCTTCATGTGCATCTTGGTATGATTATAAGTAATCATCACAATCCTGATTTTGTAAATCTTGTTCAGGT ATGTATAGTGGGGGTTATACTGCTGAAGTTACAAGCTTGTCACCTAAAGCCACAGAGAATGATGTTTATGATTTTTTCTGTCATTGTGGCGCGGTCGAGCACGTAGAAATCCTCAGATCGGGCGATTATGCATGTACTGCTTATGTGACCTTCCGAGATGCTTTTGCTCTGGAAACTGCTATACTGCTTAGTGGTGAGTGGATGAGGAGGAGATGGCCTTTGTGGAAGGATGACGTGCAGGGGGCTGAAATCTTAGATCAATGTGTGTTCATATCACGGTGGGGAACATACATAGACGAATCAGACACTTGGAACAGCCATTCACAAATGGCCAACGACAATACAAGTTTAATGGTGACAGAAATAATGCATTCTGTTCACACACCAGGGGAGGCTGTAACTATGGCTCAACAAGTTGTGAAAACAATGCTATCAAAGGGATATGTTTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCAAAAGTTTATGACCTTAGCAATAGGATTGGACTCACTGAGACAATTCATGCTGGCATGGAAACCGTTAAGTACATCGATGAGAAGTTTCACGTTTCCAATATCACCAGATCCGCTGCAGCAGTAACTGGAACAGCAGCTGTGGTGGCGGTGACGGTAACGGGTAAAGTGGCGATGGCAGCAGGTAATGCTGTAATAAACAGCAGCTACTTTTCGAAGGGCGCGCTTTGGGTTTCGGATATGTTGAGTCGTGCTGCTAAGGCTGCAGCTGAAGTAGGTAAGAATAGCAGTAAATGA MYSGGYTAEVTSLSPKATENDVYDFFCHCGAVEHVEILRSGDYACTAYVTFRDAFALETAILLSGEWMRRRWPLWKDDVQGAEILDQCVFISRWGTYIDESDTWNSHSQMANDNTSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKVAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEVGKNSSK Homology
BLAST of ClCG09G018340 vs. NCBI nr
Match: XP_038890704.1 (binding partner of ACD11 1 [Benincasa hispida] >XP_038890705.1 binding partner of ACD11 1 [Benincasa hispida] >XP_038890706.1 binding partner of ACD11 1 [Benincasa hispida]) HSP 1 Score: 459.1 bits (1180), Expect = 2.6e-125 Identity = 243/270 (90.00%), Postives = 248/270 (91.85%), Query Frame = 0
BLAST of ClCG09G018340 vs. NCBI nr
Match: KAA0039508.1 (binding partner of ACD11 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 456.1 bits (1172), Expect = 2.2e-124 Identity = 242/270 (89.63%), Postives = 247/270 (91.48%), Query Frame = 0
BLAST of ClCG09G018340 vs. NCBI nr
Match: TYK15262.1 (binding partner of ACD11 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 447.6 bits (1150), Expect = 7.7e-122 Identity = 237/265 (89.43%), Postives = 242/265 (91.32%), Query Frame = 0
BLAST of ClCG09G018340 vs. NCBI nr
Match: XP_004148690.1 (binding partner of ACD11 1 [Cucumis sativus] >XP_031742124.1 binding partner of ACD11 1 [Cucumis sativus] >KAE8648916.1 hypothetical protein Csa_009005 [Cucumis sativus]) HSP 1 Score: 446.0 bits (1146), Expect = 2.2e-121 Identity = 236/270 (87.41%), Postives = 245/270 (90.74%), Query Frame = 0
BLAST of ClCG09G018340 vs. NCBI nr
Match: XP_022134513.1 (binding partner of ACD11 1 [Momordica charantia]) HSP 1 Score: 433.0 bits (1112), Expect = 2.0e-117 Identity = 231/270 (85.56%), Postives = 243/270 (90.00%), Query Frame = 0
BLAST of ClCG09G018340 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 8.5e-23 Identity = 85/268 (31.72%), Postives = 134/268 (50.00%), Query Frame = 0
BLAST of ClCG09G018340 vs. ExPASy TrEMBL
Match: A0A5A7T9G0 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003300 PE=4 SV=1) HSP 1 Score: 456.1 bits (1172), Expect = 1.0e-124 Identity = 242/270 (89.63%), Postives = 247/270 (91.48%), Query Frame = 0
BLAST of ClCG09G018340 vs. ExPASy TrEMBL
Match: A0A5D3CUV4 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00390 PE=4 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 3.7e-122 Identity = 237/265 (89.43%), Postives = 242/265 (91.32%), Query Frame = 0
BLAST of ClCG09G018340 vs. ExPASy TrEMBL
Match: A0A0A0KS66 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G635450 PE=4 SV=1) HSP 1 Score: 446.0 bits (1146), Expect = 1.1e-121 Identity = 236/270 (87.41%), Postives = 245/270 (90.74%), Query Frame = 0
BLAST of ClCG09G018340 vs. ExPASy TrEMBL
Match: A0A6J1C268 (binding partner of ACD11 1 OS=Momordica charantia OX=3673 GN=LOC111006739 PE=4 SV=1) HSP 1 Score: 433.0 bits (1112), Expect = 9.5e-118 Identity = 231/270 (85.56%), Postives = 243/270 (90.00%), Query Frame = 0
BLAST of ClCG09G018340 vs. ExPASy TrEMBL
Match: A0A6J1JU47 (binding partner of ACD11 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487859 PE=4 SV=1) HSP 1 Score: 412.5 bits (1059), Expect = 1.3e-111 Identity = 219/270 (81.11%), Postives = 232/270 (85.93%), Query Frame = 0
BLAST of ClCG09G018340 vs. TAIR 10
Match: AT3G01210.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 241.5 bits (615), Expect = 7.8e-64 Identity = 139/269 (51.67%), Postives = 180/269 (66.91%), Query Frame = 0
BLAST of ClCG09G018340 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 215.7 bits (548), Expect = 4.6e-56 Identity = 125/266 (46.99%), Postives = 165/266 (62.03%), Query Frame = 0
BLAST of ClCG09G018340 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 121.3 bits (303), Expect = 1.2e-27 Identity = 88/268 (32.84%), Postives = 135/268 (50.37%), Query Frame = 0
BLAST of ClCG09G018340 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 117.5 bits (293), Expect = 1.7e-26 Identity = 89/273 (32.60%), Postives = 136/273 (49.82%), Query Frame = 0
BLAST of ClCG09G018340 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein ) HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25 Identity = 82/269 (30.48%), Postives = 138/269 (51.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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