ClCG09G018150 (gene) Watermelon (Charleston Gray) v2.5
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATAGTTTCCTTTTCATTTCCTTTGATAACTCCAAAACCTTCTCTCTCTCTCTCTCTCTAAAAGTAAAACCAAAAATTTGGTAGAGAGAAAAATTATGGGTCACCCTAAAATTTTCTCAACTCTTCTCCTTTCATGTTTTCTTCTTCTCTTTTTCTCAAACGGTACTATCATTTTCTTTTCTTTTCTTTTCTTTTCTATTCCTTTTTCATGGATTGATATAATATATATATATTTTTTTATTTTTCTTTTTTCTTAAGGATTAAGGGTGGAAGTGATGGCAATTACTGTGGGACATGGAAGCTATGTTAGTAGTAGATCACTGAAGGTATGATTTTGTTTTGAAATAATTAATAAAAGGGTATGATTTTGGAATATATATATATATATTTTTTTATTTATGTAGGTTTAATTTATAATATTTTGGCAGGAAAGTGGTGGAAAAATCAGAAAAATGATGATTGAAGTAATGGACTATGCAGATCCAGGGCCAAATACTAATACTAAAACTGGGTATCTTAATCCTCCTCCCCCTCCACCAGCTTAATTAATTTGTAATATTTTTCTGATTTATTATTTTCTGTTTCTTTTTTTTTTTTTTTTTTT CATAGTTTCCTTTTCATTTCCTTTGATAACTCCAAAACCTTCTCTCTCTCTCTCTCTCTAAAAGTAAAACCAAAAATTTGGTAGAGAGAAAAATTATGGGTCACCCTAAAATTTTCTCAACTCTTCTCCTTTCATGTTTTCTTCTTCTCTTTTTCTCAAACGGATTAAGGGTGGAAGTGATGGCAATTACTGTGGGACATGGAAGCTATGTTAGTAGTAGATCACTGAAGGAAAGTGGTGGAAAAATCAGAAAAATGATGATTGAAGTAATGGACTATGCAGATCCAGGGCCAAATACTAATACTAAAACTGGGTATCTTAATCCTCCTCCCCCTCCACCAGCTTAATTAATTTGTAATATTTTTCTGATTTATTATTTTCTGTTTCTTTTTTTTTTTTTTTTTTT ATGGGTCACCCTAAAATTTTCTCAACTCTTCTCCTTTCATGTTTTCTTCTTCTCTTTTTCTCAAACGGATTAAGGGTGGAAGTGATGGCAATTACTGTGGGACATGGAAGCTATGTTAGTAGTAGATCACTGAAGGAAAGTGGTGGAAAAATCAGAAAAATGATGATTGAAGTAATGGACTATGCAGATCCAGGGCCAAATACTAATACTAAAACTGGGTATCTTAATCCTCCTCCCCCTCCACCAGCTTAA MGHPKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPPPPA Homology
BLAST of ClCG09G018150 vs. NCBI nr
Match: KGN52468.1 (hypothetical protein Csa_007886 [Cucumis sativus]) HSP 1 Score: 111.3 bits (277), Expect = 4.0e-21 Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of ClCG09G018150 vs. NCBI nr
Match: KAG6602500.1 (hypothetical protein SDJN03_07733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033174.1 hypothetical protein SDJN02_07228 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 80.9 bits (198), Expect = 5.8e-12 Identity = 48/82 (58.54%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of ClCG09G018150 vs. NCBI nr
Match: KAA0039487.1 (hypothetical protein E6C27_scaffold64G003070 [Cucumis melo var. makuwa] >TYK15242.1 hypothetical protein E5676_scaffold892G00160 [Cucumis melo var. makuwa]) HSP 1 Score: 75.5 bits (184), Expect = 2.4e-10 Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of ClCG09G018150 vs. NCBI nr
Match: XP_023527249.1 (uncharacterized protein LOC111790540 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 75.1 bits (183), Expect = 3.2e-10 Identity = 47/81 (58.02%), Postives = 53/81 (65.43%), Query Frame = 0
BLAST of ClCG09G018150 vs. NCBI nr
Match: XP_023527257.1 (uncharacterized protein LOC111790540 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 72.0 bits (175), Expect = 2.7e-09 Identity = 45/81 (55.56%), Postives = 52/81 (64.20%), Query Frame = 0
BLAST of ClCG09G018150 vs. ExPASy TrEMBL
Match: A0A0A0KSB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636600 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.9e-21 Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 0
BLAST of ClCG09G018150 vs. ExPASy TrEMBL
Match: A0A5D3CUT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00160 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10 Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0
BLAST of ClCG09G018150 vs. ExPASy TrEMBL
Match: A0A0A0LCS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825030 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.4e-08 Identity = 45/86 (52.33%), Postives = 52/86 (60.47%), Query Frame = 0
BLAST of ClCG09G018150 vs. ExPASy TrEMBL
Match: A0A2P5CWE3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_116840 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.1e-07 Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 0
BLAST of ClCG09G018150 vs. ExPASy TrEMBL
Match: A0A5J5U1X7 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A10G105900v1 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.3e-06 Identity = 35/80 (43.75%), Postives = 44/80 (55.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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