ClCG09G018150 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG09G018150
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr09: 35154311 .. 35154914 (-)
RNA-Seq ExpressionClCG09G018150
SyntenyClCG09G018150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATAGTTTCCTTTTCATTTCCTTTGATAACTCCAAAACCTTCTCTCTCTCTCTCTCTCTAAAAGTAAAACCAAAAATTTGGTAGAGAGAAAAATTATGGGTCACCCTAAAATTTTCTCAACTCTTCTCCTTTCATGTTTTCTTCTTCTCTTTTTCTCAAACGGTACTATCATTTTCTTTTCTTTTCTTTTCTTTTCTATTCCTTTTTCATGGATTGATATAATATATATATATTTTTTTATTTTTCTTTTTTCTTAAGGATTAAGGGTGGAAGTGATGGCAATTACTGTGGGACATGGAAGCTATGTTAGTAGTAGATCACTGAAGGTATGATTTTGTTTTGAAATAATTAATAAAAGGGTATGATTTTGGAATATATATATATATATTTTTTTATTTATGTAGGTTTAATTTATAATATTTTGGCAGGAAAGTGGTGGAAAAATCAGAAAAATGATGATTGAAGTAATGGACTATGCAGATCCAGGGCCAAATACTAATACTAAAACTGGGTATCTTAATCCTCCTCCCCCTCCACCAGCTTAATTAATTTGTAATATTTTTCTGATTTATTATTTTCTGTTTCTTTTTTTTTTTTTTTTTTT

mRNA sequence

CATAGTTTCCTTTTCATTTCCTTTGATAACTCCAAAACCTTCTCTCTCTCTCTCTCTCTAAAAGTAAAACCAAAAATTTGGTAGAGAGAAAAATTATGGGTCACCCTAAAATTTTCTCAACTCTTCTCCTTTCATGTTTTCTTCTTCTCTTTTTCTCAAACGGATTAAGGGTGGAAGTGATGGCAATTACTGTGGGACATGGAAGCTATGTTAGTAGTAGATCACTGAAGGAAAGTGGTGGAAAAATCAGAAAAATGATGATTGAAGTAATGGACTATGCAGATCCAGGGCCAAATACTAATACTAAAACTGGGTATCTTAATCCTCCTCCCCCTCCACCAGCTTAATTAATTTGTAATATTTTTCTGATTTATTATTTTCTGTTTCTTTTTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGGTCACCCTAAAATTTTCTCAACTCTTCTCCTTTCATGTTTTCTTCTTCTCTTTTTCTCAAACGGATTAAGGGTGGAAGTGATGGCAATTACTGTGGGACATGGAAGCTATGTTAGTAGTAGATCACTGAAGGAAAGTGGTGGAAAAATCAGAAAAATGATGATTGAAGTAATGGACTATGCAGATCCAGGGCCAAATACTAATACTAAAACTGGGTATCTTAATCCTCCTCCCCCTCCACCAGCTTAA

Protein sequence

MGHPKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTKTGYLNPPPPPPA
Homology
BLAST of ClCG09G018150 vs. NCBI nr
Match: KGN52468.1 (hypothetical protein Csa_007886 [Cucumis sativus])

HSP 1 Score: 111.3 bits (277), Expect = 4.0e-21
Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 0

Query: 1  MGHPKIFST-LLLSCFLLLFFSNGLRVEVMAITVGHGSYVS-SRSLKESGGKIRKMMIEV 60
          M HPK+FST LLLSCFLLL F++GL+VE M  ++GHGS V  S SLK  GGK RKMMIE+
Sbjct: 1  MVHPKLFSTLLLLSCFLLLSFTHGLKVE-MIESLGHGSNVRISPSLKGIGGKSRKMMIEI 60

Query: 61 MDYADPGPNTNTKTGYLNPPPPP 82
          MDYADPGPNTNT++GYLNPPPPP
Sbjct: 61 MDYADPGPNTNTRSGYLNPPPPP 82

BLAST of ClCG09G018150 vs. NCBI nr
Match: KAG6602500.1 (hypothetical protein SDJN03_07733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033174.1 hypothetical protein SDJN02_07228 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 80.9 bits (198), Expect = 5.8e-12
Identity = 48/82 (58.54%), Postives = 57/82 (69.51%), Query Frame = 0

Query: 1  MGHPKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMD 60
          M HPKIF  LLL  F++L F  G  +E  A    H  Y +S S K+SGGK RK+M+EVMD
Sbjct: 1  MDHPKIFPILLL-LFIILGFGVG-AMEAAA----HPGYDTSSSQKKSGGKPRKVMMEVMD 60

Query: 61 YADPGPNTNTKTGYLNPPPPPP 83
          YADPGPNTNT++GYL PP  PP
Sbjct: 61 YADPGPNTNTRSGYLTPPSSPP 76

BLAST of ClCG09G018150 vs. NCBI nr
Match: KAA0039487.1 (hypothetical protein E6C27_scaffold64G003070 [Cucumis melo var. makuwa] >TYK15242.1 hypothetical protein E5676_scaffold892G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 2.4e-10
Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0

Query: 29 MAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTK-TGYLNPPPPPPA 84
          M  ++GHGS V S SLK  GGK RKMMIE+MDYADPGPN NT+ +GYL PPPPP A
Sbjct: 1  MIESLGHGSNVRSSSLKGIGGKSRKMMIEIMDYADPGPNNNTRSSGYLPPPPPPAA 56

BLAST of ClCG09G018150 vs. NCBI nr
Match: XP_023527249.1 (uncharacterized protein LOC111790540 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 75.1 bits (183), Expect = 3.2e-10
Identity = 47/81 (58.02%), Postives = 53/81 (65.43%), Query Frame = 0

Query: 4  PKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYAD 63
          PKIF  L     LLLF   G  V  M      G  +SS S K+SGGK RK+M+EVMDYAD
Sbjct: 2  PKIFPIL-----LLLFIIFGFGVGAMEAAAHAGCDISS-SQKKSGGKPRKVMMEVMDYAD 61

Query: 64 PGPNTNTKTGYLNPP--PPPP 83
          PGPNTNT++GYL PP  PPPP
Sbjct: 62 PGPNTNTRSGYLTPPSSPPPP 76

BLAST of ClCG09G018150 vs. NCBI nr
Match: XP_023527257.1 (uncharacterized protein LOC111790540 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 72.0 bits (175), Expect = 2.7e-09
Identity = 45/81 (55.56%), Postives = 52/81 (64.20%), Query Frame = 0

Query: 4  PKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYAD 63
          PKIF  L     LLLF   G  V  M      G  +SS   ++SGGK RK+M+EVMDYAD
Sbjct: 2  PKIFPIL-----LLLFIIFGFGVGAMEAAAHAGCDISSS--QKSGGKPRKVMMEVMDYAD 61

Query: 64 PGPNTNTKTGYLNPP--PPPP 83
          PGPNTNT++GYL PP  PPPP
Sbjct: 62 PGPNTNTRSGYLTPPSSPPPP 75

BLAST of ClCG09G018150 vs. ExPASy TrEMBL
Match: A0A0A0KSB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636600 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-21
Identity = 61/83 (73.49%), Postives = 70/83 (84.34%), Query Frame = 0

Query: 1  MGHPKIFST-LLLSCFLLLFFSNGLRVEVMAITVGHGSYVS-SRSLKESGGKIRKMMIEV 60
          M HPK+FST LLLSCFLLL F++GL+VE M  ++GHGS V  S SLK  GGK RKMMIE+
Sbjct: 1  MVHPKLFSTLLLLSCFLLLSFTHGLKVE-MIESLGHGSNVRISPSLKGIGGKSRKMMIEI 60

Query: 61 MDYADPGPNTNTKTGYLNPPPPP 82
          MDYADPGPNTNT++GYLNPPPPP
Sbjct: 61 MDYADPGPNTNTRSGYLNPPPPP 82

BLAST of ClCG09G018150 vs. ExPASy TrEMBL
Match: A0A5D3CUT5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00160 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10
Identity = 39/56 (69.64%), Postives = 44/56 (78.57%), Query Frame = 0

Query: 29 MAITVGHGSYVSSRSLKESGGKIRKMMIEVMDYADPGPNTNTK-TGYLNPPPPPPA 84
          M  ++GHGS V S SLK  GGK RKMMIE+MDYADPGPN NT+ +GYL PPPPP A
Sbjct: 1  MIESLGHGSNVRSSSLKGIGGKSRKMMIEIMDYADPGPNNNTRSSGYLPPPPPPAA 56

BLAST of ClCG09G018150 vs. ExPASy TrEMBL
Match: A0A0A0LCS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825030 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.4e-08
Identity = 45/86 (52.33%), Postives = 52/86 (60.47%), Query Frame = 0

Query: 1  MGHPKIFSTLLLSCFLL-LFFSNG----LRVEVMAITVGHGSYVSSRSLKESGGKIRKMM 60
          MG     S LLL  FL+ L FSNG    LR+ V  +   H S V    L+ESG K R M 
Sbjct: 1  MGRSSFLSILLLLSFLITLCFSNGFGRNLRMVVEPLDSHHNSRV---LLEESGRKWRMMK 60

Query: 61 IEVMDYADPGPNTNTKTGYLNPPPPP 82
          +E MDYADP PNTN K GY++PPPPP
Sbjct: 61 METMDYADPEPNTNVKGGYVSPPPPP 83

BLAST of ClCG09G018150 vs. ExPASy TrEMBL
Match: A0A2P5CWE3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_116840 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 6.1e-07
Identity = 36/81 (44.44%), Postives = 49/81 (60.49%), Query Frame = 0

Query: 1  MGHPKIFSTLLLSCFLLLFFSNGLRVEVMAITVGH-GSYVSSRSLKESGGKIRKMMIEVM 60
          MG     + LL+S F+LLFFS+G     +    GH   + SS  +KE+GG   + MIEV 
Sbjct: 1  MGRRCFPTILLVSLFMLLFFSHGFGRRSLKTVEGHQEEHYSSVEVKENGGVKSREMIEVT 60

Query: 61 DYADPGPNTNTKTGYLNPPPP 81
          DY++P PNTN + GY+  PPP
Sbjct: 61 DYSEPEPNTNPRAGYIFTPPP 81

BLAST of ClCG09G018150 vs. ExPASy TrEMBL
Match: A0A5J5U1X7 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A10G105900v1 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.3e-06
Identity = 35/80 (43.75%), Postives = 44/80 (55.00%), Query Frame = 0

Query: 1  MGHPKIFSTLLLSCFLLLFFSNGLRVEVMAITVGHGSYVSSRSLKESGGKIRKMMIEVMD 60
          MG     + LLLS  LLL FS G  +  M  TV      S+  L++      + MIE+MD
Sbjct: 1  MGRSCFLNLLLLSMLLLLSFSQGFSIREMMETVEFEE--STAQLEQENADTSREMIEIMD 60

Query: 61 YADPGPNTNTKTGYLNPPPP 81
          Y DPGPN N +TGY+  PPP
Sbjct: 61 YKDPGPNVNPRTGYIFSPPP 78

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN52468.14.0e-2173.49hypothetical protein Csa_007886 [Cucumis sativus][more]
KAG6602500.15.8e-1258.54hypothetical protein SDJN03_07733, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0039487.12.4e-1069.64hypothetical protein E6C27_scaffold64G003070 [Cucumis melo var. makuwa] >TYK1524... [more]
XP_023527249.13.2e-1058.02uncharacterized protein LOC111790540 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_023527257.12.7e-0955.56uncharacterized protein LOC111790540 isoform X2 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KSB71.9e-2173.49Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636600 PE=4 SV=1[more]
A0A5D3CUT51.2e-1069.64Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LCS01.4e-0852.33Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G825030 PE=4 SV=1[more]
A0A2P5CWE36.1e-0744.44Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_116840 PE... [more]
A0A5J5U1X72.3e-0643.75Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A10G105900v1 PE... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..83
NoneNo IPR availablePANTHERPTHR37908TRANSMEMBRANE PROTEINcoord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G018150.1ClCG09G018150.1mRNA