ClCG09G015420 (gene) Watermelon (Charleston Gray) v2.5

Overview


Name	ClCG09G015420
Type	gene
Organism	Citrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
Description	copper-transporting ATPase PAA1, chloroplastic-like
Location	CG_Chr09: 29793164 .. 29796326 (+)
RNA-Seq Expression	ClCG09G015420
Synteny	ClCG09G015420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAGGGACACAGAAAAAGGCCATCAGTCGAGTGGTTGACCATATTCCTCCCTCCCTCCTCACTTCCCATCTTCTCCTTTCTCCTTAGTTTCTCGGAGAGATTATTCCTTTCCTCCATGGATTCCGCCATCTCTCTAATGGCCTCCAATGCCCCTCTCTCCACTCTCTCCACCATCGCCCGCAGCTTTTCCAGCAGCCCCAATTTCACCCACTCCCCCTCCATTTCCCCTATCTCCACTCTTTCCTTCTCCCTTCCCGCTGCTCTTTCTCCCCTCCACCGTCGTCAGAAATTCATCTCCAATTTTGCTTCTGGCAACGGCAATGGCGGCGTTCGAGGAGAGAACGGTGGAGGTGGCGGCGGCGACGATGGTGGACCTGACGGCGGCGATGTGGACTCGAAATTGCTTGCAGGAGATGCTGACGAGGACGCCACGCTGTCCGCAGACGTGATTGTTCTCGGTGTTGAAGTACGCGACGTGTTCTGTTTGTTTTCAGTTTTCGATTGGTGCTAATTTTTATCGGTTTTGTTCTCTTTGTTATAGGGGATGACGTGTAAGGGGTGTTCTGCAAGTGTCAAGAGGATTCTTGAAAGTCAGGTGGTTATATACTTGTGCTTTCTTCTTGTTTGTTTTACTTATTATTCCATTGATGATTCCACACTTAACAATATTCTATTCCTCCCCTTGGCAATTGGGGTTGAGAACAACTCATATTATCTAACATGCTAATAGAGCTCATAACGCTCAAATAGGGCATTCATTAAAGAACAAAAGTTGAGATTCGCTCCATAGATGTGAACTCAAAAAAGTCACCATTTCGGGGGTATGTTGGAGATTTCAGATTGGAAAAATCTAGGACCTCACAATGTTTACAACCTAGATGAGCTATTCCTCCGATTGCCAATGTTTTTTTTATTTGTTTATTTTTATTTGATTTGACAGGTCGAAACTGTACAGTGTAGGACTTGATTGTTTTTGCTTATCCTAAAAACTGTACAGTGTAGTGCGATTGCATTTTAAGTATAGAATTGAATTGTTTTATATTTCTAGCTCTCCCATACTGGTGTTAAAGAATATATATGGAAGATTAAATTCATCATAATCAACCAGGCTTAGATTTTTTAATCGACCACGATTCAATATGGTACTAAAGCAGGACTTGGGGCCAGATAATTTGATTGTCTTCTGAATTAGCATTGTTGACAATCATCTGATTTTCAAACTCACAGTAAGACTACAAAATTTTCTGTCCTGTAAATAACTACTTCACTGTTCTTCTTCTCTTTGTATTATGGACAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACAGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTAGGAGCGGCACTTGCGAAGCATTTGACTACTTGTGGTTTTTCTTCTAAGGTTCAAGGTCAGCAAAGCATCATAAATTCATAACTCGTAAGTCACGACTCACAACCATATCTGATTTGTTGTGTTATCTTCTCCTTCTTCTTTCTACTTTTGTTGTTGCTGTCAAGATTCCCACTTTCAGTTCTTAAGACTCTAATCTTTCTGCCTGAAAAGCATGCTTATCAATTCATTTTCAAGTTTCTTCATTTTCTGTATGGCTGACCATATGAAATGCTAAAACCTATCATCCCATCTCAACCTCCATGCTAACTCGATGCTCGAGCTTCTAAGCTAAGATATATGTTTTTCTTATGGTGCTTTTTTGTAGTATTATATTTAACAATCTAGACAATCTAGAATCTTGTATGAATTCTATTGTGATCTAGGTCAGCTCAGTTAATTTTGTATTTCTCATCATATAGTTTGTTGACCAATTACTGGGAGGTCTATGGCAGATTCCTTTGCAATCTATAATGGGATTCGAGTCGGAATTTTAGAAGTTTGAGTACGTATCATATTAAGATTCACCATACATGATTGAGTGACTGGGATTTTGCTTAAACAACTCTAGAAAAGAAAATATAGTTTTAGAACTGTTTGAAATGAAGTAGCGTCCTCCATTTGTGCTCGTGAAATTTTCTTTCCCCACATACATACTTTATAGGGTCTGATTGATTTCCATTCTACACTTGTGGTTCTACTTTATTCATGAATAATTCAAGAATTCAGTTGAAGCTTCTTTGAACTACCAATTTTGCGACAACTGAGTTCCATAAATTAATGTCACTGAAGTCTAATTAGTTATTGCATTCTCATTCGTGCATGTATTCTAATTCAACTAATGGACAAGAATATCAAAGGGTGATTTCTTTACCAAGCCTGTTGTATTTCTAGTAGTTTTGTCTGTGTTTGATCAACTTTTGTTATTACAAGGAATGATGCTGAGCGTGATGAGACTTGGCAGCTAATTGTTCGTTTTACATATTTGAGTCTCTTCCCGCATTTTGTATATCTGGGGACTTCTGAACTTTTCAATTTATTTCTCTTATCTTTTTTCCTTCTTTCCTCATCCCTCAGAAATTGGTAGTTGAAAGATCAATCATAAAATCTTGTCGGGGATGGTAACCAAAACAAATCAACATCTATTACTGAAAACAAAGAAGGCTTAGGCAGAGAACTTTGCCACTTGTCAATATATTAAATTTCATGATCAAAATATAGCTCCTTGAAGGAAAGGTACAAAGTATACTAAGGAACAATACTTCAATCTTGCAAGAGAAAAGAAGAATTAAAGAAACATTCGCATGTATTATCTCAGAATTTATGTAGTTATCATGGCTTATGTGATTAATGCTGGTTAATTTACAGGACAAGGTGCTATAGGAGGCGACGTTTCACTATAGTAATGCAAAAGTTCAATAACAAGTGAATTTTATGGTGCAATGTTATGACACGATACGAATTTCAAGTAGTTCTACCTGCTTACTTGAATTGAACTCAACAATAAGTGCAGAAGCCAAAGAACAGGACTCAATTTGTTGGATATCAATGTGTATCAATAAACTGATTAATTTCAGCCATGGATGGTGTAAGATTGTTTGGAGACCCTTTAGAGACTAGAAATTTGGTGTTGCATACTGTGAGAAGAGTGACATGTTTACATATGAATAGGAGTATAGTCTTAGAAGTTGTTTACAAGCTAGTGATGTCTGGTTGTTTTTATGCGGAAG

mRNA sequence

CTCAGGGACACAGAAAAAGGCCATCAGTCGAGTGGTTGACCATATTCCTCCCTCCCTCCTCACTTCCCATCTTCTCCTTTCTCCTTAGTTTCTCGGAGAGATTATTCCTTTCCTCCATGGATTCCGCCATCTCTCTAATGGCCTCCAATGCCCCTCTCTCCACTCTCTCCACCATCGCCCGCAGCTTTTCCAGCAGCCCCAATTTCACCCACTCCCCCTCCATTTCCCCTATCTCCACTCTTTCCTTCTCCCTTCCCGCTGCTCTTTCTCCCCTCCACCGTCGTCAGAAATTCATCTCCAATTTTGCTTCTGGCAACGGCAATGGCGGCGTTCGAGGAGAGAACGGTGGAGGTGGCGGCGGCGACGATGGTGGACCTGACGGCGGCGATGTGGACTCGAAATTGCTTGCAGGAGATGCTGACGAGGACGCCACGCTGTCCGCAGACGTGATTGTTCTCGGTGTTGAAGGGATGACGTGTAAGGGGTGTTCTGCAAGTGTCAAGAGGATTCTTGAAAGTCAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACAGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTAGGAGCGGCACTTGCGAAGCATTTGACTACTTGTGGTTTTTCTTCTAAGGTTCAAGGACAAGGTGCTATAGGAGGCGACGTTTCACTATAGTAATGCAAAAGTTCAATAACAAGTGAATTTTATGGTGCAATGTTATGACACGATACGAATTTCAAGTAGTTCTACCTGCTTACTTGAATTGAACTCAACAATAAGTGCAGAAGCCAAAGAACAGGACTCAATTTGTTGGATATCAATGTGTATCAATAAACTGATTAATTTCAGCCATGGATGGTGTAAGATTGTTTGGAGACCCTTTAGAGACTAGAAATTTGGTGTTGCATACTGTGAGAAGAGTGACATGTTTACATATGAATAGGAGTATAGTCTTAGAAGTTGTTTACAAGCTAGTGATGTCTGGTTGTTTTTATGCGGAAG

Coding sequence (CDS)

ATGGATTCCGCCATCTCTCTAATGGCCTCCAATGCCCCTCTCTCCACTCTCTCCACCATCGCCCGCAGCTTTTCCAGCAGCCCCAATTTCACCCACTCCCCCTCCATTTCCCCTATCTCCACTCTTTCCTTCTCCCTTCCCGCTGCTCTTTCTCCCCTCCACCGTCGTCAGAAATTCATCTCCAATTTTGCTTCTGGCAACGGCAATGGCGGCGTTCGAGGAGAGAACGGTGGAGGTGGCGGCGGCGACGATGGTGGACCTGACGGCGGCGATGTGGACTCGAAATTGCTTGCAGGAGATGCTGACGAGGACGCCACGCTGTCCGCAGACGTGATTGTTCTCGGTGTTGAAGGGATGACGTGTAAGGGGTGTTCTGCAAGTGTCAAGAGGATTCTTGAAAGTCAGCCACAAGTGTCACATGCTAGTGTTGACCTTGCTTCTGAGACAGCAATCGTGTGGCCTGTAGCTGAAGCAAAAATCACACCCAACTGGCGGGAAGAGCTAGGAGCGGCACTTGCGAAGCATTTGACTACTTGTGGTTTTTCTTCTAAGGTTCAAGGACAAGGTGCTATAGGAGGCGACGTTTCACTATAG

Protein sequence

MDSAISLMASNAPLSTLSTIARSFSSSPNFTHSPSISPISTLSFSLPAALSPLHRRQKFISNFASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLLAGDADEDATLSADVIVLGVEGMTCKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAALAKHLTTCGFSSKVQGQGAIGGDVSL

Homology

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BLAST of ClCG09G015420 vs. NCBI nr
Match: XP_038887264.1 (copper-transporting ATPase PAA1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 331.3 bits (848), Expect = 5.9e-87
Identity = 183/197 (92.89%), Postives = 188/197 (95.43%), Query Frame = 0


Query: 1   MDSAISLMASNAPLSTLSTIARSFSSSPNFTHSPSISPISTLSFSLPAALSPLHRRQKFI 60
           MDSAISLMASNAPLSTLSTI+RSFSS  NFTH  SISPISTLSFSL A+L PLHRRQKFI
Sbjct: 1   MDSAISLMASNAPLSTLSTISRSFSSL-NFTHPTSISPISTLSFSLRASLPPLHRRQKFI 60

Query: 61  SNFASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLLAGDADEDATLSADVIVLGVEGMT 120
           SNF+SGNGNGGVRGENGGGGGGDDGGPDG DVDSKLLAG+AD+DATLSADVIVLGV GMT
Sbjct: 61  SNFSSGNGNGGVRGENGGGGGGDDGGPDGADVDSKLLAGEADDDATLSADVIVLGVGGMT 120

Query: 121 CKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAALAKHLTTCG 180
           CKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELG ALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTCG 180

Query: 181 FSSKVQGQGAIGGDVSL 198
           FSSKVQGQGAIGGDVSL
Sbjct: 181 FSSKVQGQGAIGGDVSL 196

[Close]

BLAST of ClCG09G015420 vs. NCBI nr
Match: XP_022963522.1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 310.1 bits (793), Expect = 1.4e-80
Identity = 171/197 (86.80%), Postives = 181/197 (91.88%), Query Frame = 0


Query: 1   MDSAISLMASNAPLSTLSTIARSFSSSPNFTHSPSISPISTLSFSLPAALSPLHRRQKFI 60
           MDSA+S+MASNAPL TLSTI RSFS+  NFTHS SISPISTLSFSL AA+ PLHRR KFI
Sbjct: 1   MDSALSVMASNAPLFTLSTITRSFSTL-NFTHSLSISPISTLSFSLRAAVPPLHRRHKFI 60

Query: 61  SNFASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLLAGDADEDATLSADVIVLGVEGMT 120
           SN +SGNGNGGVRGE+GGGGGGDDGGPDGGDV S LLAG+A++DA LSAD IVLGV GMT
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLAGEAEDDAALSADAIVLGVGGMT 120

Query: 121 CKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAALAKHLTTCG 180
           CKGCSASVKRILESQPQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKVQGQGAIGGDVSL 198
           FSSKVQGQGAIGGDVSL
Sbjct: 181 FSSKVQGQGAIGGDVSL 196

[Close]

BLAST of ClCG09G015420 vs. NCBI nr
Match: XP_022967629.1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 307.8 bits (787), Expect = 6.9e-80
Identity = 169/197 (85.79%), Postives = 181/197 (91.88%), Query Frame = 0


Query: 1   MDSAISLMASNAPLSTLSTIARSFSSSPNFTHSPSISPISTLSFSLPAALSPLHRRQKFI 60
           MDSA+S+MASNAPL  LSTI RSFS+  NFTHSPSISPISTLSFSL AA+ PLHRR KFI
Sbjct: 1   MDSALSVMASNAPLFALSTITRSFSTL-NFTHSPSISPISTLSFSLRAAVPPLHRRHKFI 60

Query: 61  SNFASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLLAGDADEDATLSADVIVLGVEGMT 120
           SN +SGNGNGGVRGE+GGGGGGDDGGPDGGDV S LL+G+A++DATLSAD IVLGV GMT
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLSGEAEDDATLSADAIVLGVGGMT 120

Query: 121 CKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAALAKHLTTCG 180
           CKGCSASVKRILESQPQVS+ASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSYASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKVQGQGAIGGDVSL 198
           FSSKVQGQGAIGG VSL
Sbjct: 181 FSSKVQGQGAIGGGVSL 196

[Close]

BLAST of ClCG09G015420 vs. NCBI nr
Match: XP_023553917.1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553918.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553920.1 copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 298.1 bits (762), Expect = 5.5e-77
Identity = 168/197 (85.28%), Postives = 177/197 (89.85%), Query Frame = 0


Query: 1   MDSAISLMASNAPLSTLSTIARSFSSSPNFTHSPSISPISTLSFSLPAALSPLHRRQKFI 60
           MDSA+SLMASNAP   LSTI RSFS+   FTHS SISPISTLSFSL AA+ PLHRR KFI
Sbjct: 1   MDSALSLMASNAP---LSTITRSFSTL-YFTHSTSISPISTLSFSLRAAVPPLHRRHKFI 60

Query: 61  SNFASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLLAGDADEDATLSADVIVLGVEGMT 120
           SN +SGNGNGGVRGE+GGGGG DDGGPDGGDV S LLAG+A++DATLSAD IVLGV GM 
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGDDDGGPDGGDVGSNLLAGEAEDDATLSADAIVLGVGGMR 120

Query: 121 CKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAALAKHLTTCG 180
           CKGCSASVKRILESQPQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKVQGQGAIGGDVSL 198
           FSSKVQGQGAIGGDVSL
Sbjct: 181 FSSKVQGQGAIGGDVSL 193

[Close]

BLAST of ClCG09G015420 vs. NCBI nr
Match: XP_022967630.1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 293.9 bits (751), Expect = 1.0e-75
Identity = 161/188 (85.64%), Postives = 173/188 (92.02%), Query Frame = 0


Query: 1   MDSAISLMASNAPLSTLSTIARSFSSSPNFTHSPSISPISTLSFSLPAALSPLHRRQKFI 60
           MDSA+S+MASNAPL  LSTI RSFS+  NFTHSPSISPISTLSFSL AA+ PLHRR KFI
Sbjct: 1   MDSALSVMASNAPLFALSTITRSFSTL-NFTHSPSISPISTLSFSLRAAVPPLHRRHKFI 60

Query: 61  SNFASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLLAGDADEDATLSADVIVLGVEGMT 120
           SN +SGNGNGGVRGE+GGGGGGDDGGPDGGDV S LL+G+A++DATLSAD IVLGV GMT
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLSGEAEDDATLSADAIVLGVGGMT 120

Query: 121 CKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAALAKHLTTCG 180
           CKGCSASVKRILESQPQVS+ASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSYASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKVQGQ 189
           FSSKVQGQ
Sbjct: 181 FSSKVQGQ 187

[Close]

BLAST of ClCG09G015420 vs. ExPASy Swiss-Prot
Match: Q9SZC9 (Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA1 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 6.4e-28
Identity = 79/146 (54.11%), Postives = 96/146 (65.75%), Query Frame = 0


Query: 45  SLPAALSPL--HRRQKFISN-----FASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLL 104
           SL AA+ P+  HR +   S+       S  G  G  G NGG GGG  GG + GD  SKL 
Sbjct: 76  SLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGDSKSKLG 135

Query: 105 AGDADEDATLSADVIVLGVEGMTCKGCSASVKRILESQPQVSHASVDLASETAIVWPVAE 164
           A  +D  +  S+D+I+L V GMTC GCSASVK+ILESQPQV+ ASV+L +ETAIVWPV E
Sbjct: 136 ANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVPE 195

Query: 165 AKITPNWREELGAALAKHLTTCGFSS 184
           AK  P+W++ LG  LA HLT CGF S
Sbjct: 196 AKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of ClCG09G015420 vs. ExPASy Swiss-Prot
Match: B9DFX7 (Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAA2 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.0e-06
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 112 IVLGVEGMTCKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAA 171
           I+L V GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T +  E    +
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADTAE----S 137

Query: 172 LAKHLTTCGFSSK--VQGQG 190
           LAK LT  GF +K  V G G
Sbjct: 138 LAKRLTESGFEAKRRVSGMG 153

[Close]

BLAST of ClCG09G015420 vs. ExPASy TrEMBL
Match: A0A6J1HFH1 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111463827 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 6.8e-81
Identity = 171/197 (86.80%), Postives = 181/197 (91.88%), Query Frame = 0


Query: 1   MDSAISLMASNAPLSTLSTIARSFSSSPNFTHSPSISPISTLSFSLPAALSPLHRRQKFI 60
           MDSA+S+MASNAPL TLSTI RSFS+  NFTHS SISPISTLSFSL AA+ PLHRR KFI
Sbjct: 1   MDSALSVMASNAPLFTLSTITRSFSTL-NFTHSLSISPISTLSFSLRAAVPPLHRRHKFI 60

Query: 61  SNFASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLLAGDADEDATLSADVIVLGVEGMT 120
           SN +SGNGNGGVRGE+GGGGGGDDGGPDGGDV S LLAG+A++DA LSAD IVLGV GMT
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLAGEAEDDAALSADAIVLGVGGMT 120

Query: 121 CKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAALAKHLTTCG 180
           CKGCSASVKRILESQPQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKVQGQGAIGGDVSL 198
           FSSKVQGQGAIGGDVSL
Sbjct: 181 FSSKVQGQGAIGGDVSL 196

[Close]

BLAST of ClCG09G015420 vs. ExPASy TrEMBL
Match: A0A6J1HX97 (copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467071 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.4e-80
Identity = 169/197 (85.79%), Postives = 181/197 (91.88%), Query Frame = 0


Query: 1   MDSAISLMASNAPLSTLSTIARSFSSSPNFTHSPSISPISTLSFSLPAALSPLHRRQKFI 60
           MDSA+S+MASNAPL  LSTI RSFS+  NFTHSPSISPISTLSFSL AA+ PLHRR KFI
Sbjct: 1   MDSALSVMASNAPLFALSTITRSFSTL-NFTHSPSISPISTLSFSLRAAVPPLHRRHKFI 60

Query: 61  SNFASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLLAGDADEDATLSADVIVLGVEGMT 120
           SN +SGNGNGGVRGE+GGGGGGDDGGPDGGDV S LL+G+A++DATLSAD IVLGV GMT
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLSGEAEDDATLSADAIVLGVGGMT 120

Query: 121 CKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAALAKHLTTCG 180
           CKGCSASVKRILESQPQVS+ASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSYASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKVQGQGAIGGDVSL 198
           FSSKVQGQGAIGG VSL
Sbjct: 181 FSSKVQGQGAIGGGVSL 196

[Close]

BLAST of ClCG09G015420 vs. ExPASy TrEMBL
Match: A0A6J1HV12 (copper-transporting ATPase PAA1, chloroplastic-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467071 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 5.0e-76
Identity = 161/188 (85.64%), Postives = 173/188 (92.02%), Query Frame = 0


Query: 1   MDSAISLMASNAPLSTLSTIARSFSSSPNFTHSPSISPISTLSFSLPAALSPLHRRQKFI 60
           MDSA+S+MASNAPL  LSTI RSFS+  NFTHSPSISPISTLSFSL AA+ PLHRR KFI
Sbjct: 1   MDSALSVMASNAPLFALSTITRSFSTL-NFTHSPSISPISTLSFSLRAAVPPLHRRHKFI 60

Query: 61  SNFASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLLAGDADEDATLSADVIVLGVEGMT 120
           SN +SGNGNGGVRGE+GGGGGGDDGGPDGGDV S LL+G+A++DATLSAD IVLGV GMT
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLSGEAEDDATLSADAIVLGVGGMT 120

Query: 121 CKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAALAKHLTTCG 180
           CKGCSASVKRILESQPQVS+ASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSYASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKVQGQ 189
           FSSKVQGQ
Sbjct: 181 FSSKVQGQ 187

[Close]

BLAST of ClCG09G015420 vs. ExPASy TrEMBL
Match: A0A6J1HI09 (copper-transporting ATPase PAA1, chloroplastic-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463827 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 6.6e-76
Identity = 162/188 (86.17%), Postives = 172/188 (91.49%), Query Frame = 0


Query: 1   MDSAISLMASNAPLSTLSTIARSFSSSPNFTHSPSISPISTLSFSLPAALSPLHRRQKFI 60
           MDSA+S+MASNAPL TLSTI RSFS+  NFTHS SISPISTLSFSL AA+ PLHRR KFI
Sbjct: 1   MDSALSVMASNAPLFTLSTITRSFSTL-NFTHSLSISPISTLSFSLRAAVPPLHRRHKFI 60

Query: 61  SNFASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLLAGDADEDATLSADVIVLGVEGMT 120
           SN +SGNGNGGVRGE+GGGGGGDDGGPDGGDV S LLAG+A++DA LSAD IVLGV GMT
Sbjct: 61  SNSSSGNGNGGVRGESGGGGGGDDGGPDGGDVGSNLLAGEAEDDAALSADAIVLGVGGMT 120

Query: 121 CKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAALAKHLTTCG 180
           CKGCSASVKRILESQPQVSHASVDLASETA+VWP AEAKITPNWREELG ALAKHLTTCG
Sbjct: 121 CKGCSASVKRILESQPQVSHASVDLASETAVVWPAAEAKITPNWREELGEALAKHLTTCG 180

Query: 181 FSSKVQGQ 189
           FSSKVQGQ
Sbjct: 181 FSSKVQGQ 187

[Close]

BLAST of ClCG09G015420 vs. ExPASy TrEMBL
Match: A0A1S3BZZ1 (copper-transporting ATPase PAA1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103495426 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.3e-75
Identity = 168/198 (84.85%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MDSAISLMASNAPLSTLSTIARSFSSSPNFTHSPSISPISTLSFSLPAALSPLHRRQKFI 60
           MDSAISLMASN+ LSTLSTI RS     +FT   SIS ISTLSF L AAL P+HRRQKF+
Sbjct: 1   MDSAISLMASNSFLSTLSTIPRS-----SFT---SISTISTLSFPLRAALPPIHRRQKFV 60

Query: 61  SNFASGNGNGGVRGEN-GGGGGGDDGGPDGGDVDSKLLAGDADEDATLSADVIVLGVEGM 120
           S FASGNGNGGVRGE+ GGGGGGDDGGP+G DVDSKLLAG+AD+DATLSADVIV+GV GM
Sbjct: 61  SVFASGNGNGGVRGESGGGGGGGDDGGPNGSDVDSKLLAGEADDDATLSADVIVIGVGGM 120

Query: 121 TCKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAALAKHLTTC 180
           TCKGC ASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELG ALAKHLTTC
Sbjct: 121 TCKGCCASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGVALAKHLTTC 180

Query: 181 GFSSKVQGQGAIGGDVSL 198
           GFSSKVQGQGAIGGDV+L
Sbjct: 181 GFSSKVQGQGAIGGDVTL 190

[Close]

BLAST of ClCG09G015420 vs. TAIR 10
Match: AT4G33520.1 (P-type ATP-ase 1 )

HSP 1 Score: 128.3 bits (321), Expect = 7.0e-30
Identity = 80/151 (52.98%), Postives = 99/151 (65.56%), Query Frame = 0


Query: 45  SLPAALSPL--HRRQKFISN-----FASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLL 104
           SL AA+ P+  HR +   S+       S  G  G  G NGG GGG  GG + GD  SKL 
Sbjct: 76  SLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGDSKSKLG 135

Query: 105 AGDADEDATLSADVIVLGVEGMTCKGCSASVKRILESQPQVSHASVDLASETAIVWPVAE 164
           A  +D  +  S+D+I+L V GMTC GCSASVK+ILESQPQV+ ASV+L +ETAIVWPV E
Sbjct: 136 ANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVPE 195

Query: 165 AKITPNWREELGAALAKHLTTCGFSSKVQGQ 189
           AK  P+W++ LG  LA HLT CGF S  +G+
Sbjct: 196 AKSVPDWQKSLGETLANHLTNCGFQSTPRGE 226

[Close]

BLAST of ClCG09G015420 vs. TAIR 10
Match: AT4G33520.2 (P-type ATP-ase 1 )

HSP 1 Score: 125.6 bits (314), Expect = 4.5e-29
Identity = 79/146 (54.11%), Postives = 96/146 (65.75%), Query Frame = 0


Query: 45  SLPAALSPL--HRRQKFISN-----FASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLL 104
           SL AA+ P+  HR +   S+       S  G  G  G NGG GGG  GG + GD  SKL 
Sbjct: 76  SLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGDSKSKLG 135

Query: 105 AGDADEDATLSADVIVLGVEGMTCKGCSASVKRILESQPQVSHASVDLASETAIVWPVAE 164
           A  +D  +  S+D+I+L V GMTC GCSASVK+ILESQPQV+ ASV+L +ETAIVWPV E
Sbjct: 136 ANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVPE 195

Query: 165 AKITPNWREELGAALAKHLTTCGFSS 184
           AK  P+W++ LG  LA HLT CGF S
Sbjct: 196 AKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of ClCG09G015420 vs. TAIR 10
Match: AT4G33520.3 (P-type ATP-ase 1 )

HSP 1 Score: 125.6 bits (314), Expect = 4.5e-29
Identity = 79/146 (54.11%), Postives = 96/146 (65.75%), Query Frame = 0


Query: 45  SLPAALSPL--HRRQKFISN-----FASGNGNGGVRGENGGGGGGDDGGPDGGDVDSKLL 104
           SL AA+ P+  HR +   S+       S  G  G  G NGG GGG  GG + GD  SKL 
Sbjct: 76  SLGAAVLPVIRHRLECLSSSSPSFRSISSGGGSGFGGYNGGSGGGGGGGSESGDSKSKLG 135

Query: 105 AGDADEDATLSADVIVLGVEGMTCKGCSASVKRILESQPQVSHASVDLASETAIVWPVAE 164
           A  +D  +  S+D+I+L V GMTC GCSASVK+ILESQPQV+ ASV+L +ETAIVWPV E
Sbjct: 136 ANASDGVSVPSSDIIILDVGGMTCGGCSASVKKILESQPQVASASVNLTTETAIVWPVPE 195

Query: 165 AKITPNWREELGAALAKHLTTCGFSS 184
           AK  P+W++ LG  LA HLT CGF S
Sbjct: 196 AKSVPDWQKSLGETLANHLTNCGFQS 221

[Close]

BLAST of ClCG09G015420 vs. TAIR 10
Match: AT5G21930.1 (P-type ATPase of Arabidopsis 2 )

HSP 1 Score: 52.0 bits (123), Expect = 6.4e-07
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 112 IVLGVEGMTCKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAA 171
           I+L V GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T +  E    +
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADTAE----S 137

Query: 172 LAKHLTTCGFSSK--VQGQG 190
           LAK LT  GF +K  V G G
Sbjct: 138 LAKRLTESGFEAKRRVSGMG 153

[Close]

BLAST of ClCG09G015420 vs. TAIR 10
Match: AT5G21930.2 (P-type ATPase of Arabidopsis 2 )

HSP 1 Score: 52.0 bits (123), Expect = 6.4e-07
Identity = 34/80 (42.50%), Postives = 46/80 (57.50%), Query Frame = 0


Query: 112 IVLGVEGMTCKGCSASVKRILESQPQVSHASVDLASETAIVWPVAEAKITPNWREELGAA 171
           I+L V GM C GC A VK +L S  +V+ A V++ +ETA V    E ++T +  E    +
Sbjct: 78  ILLDVSGMMCGGCVARVKSVLMSDDRVASAVVNMLTETAAVKFKPEVEVTADTAE----S 137

Query: 172 LAKHLTTCGFSSK--VQGQG 190
           LAK LT  GF +K  V G G
Sbjct: 138 LAKRLTESGFEAKRRVSGMG 153

The following BLAST results are available for this feature:

BLAST of ClCG09G015420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038887264.1	5.9e-87	92.89	copper-transporting ATPase PAA1, chloroplastic-like [Benincasa hispida]	[more]
XP_022963522.1	1.4e-80	86.80	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita moscha...	[more]
XP_022967629.1	6.9e-80	85.79	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita maxima...	[more]
XP_023553917.1	5.5e-77	85.28	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 [Cucurbita pepo s...	[more]
XP_022967630.1	1.0e-75	85.64	copper-transporting ATPase PAA1, chloroplastic-like isoform X2 [Cucurbita maxima...	[more]

BLAST of ClCG09G015420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZC9	6.4e-28	54.11	Copper-transporting ATPase PAA1, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
B9DFX7	9.0e-06	42.50	Copper-transporting ATPase PAA2, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of ClCG09G015420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HFH1	6.8e-81	86.80	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita mosc...	[more]
A0A6J1HX97	3.4e-80	85.79	copper-transporting ATPase PAA1, chloroplastic-like isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1HV12	5.0e-76	85.64	copper-transporting ATPase PAA1, chloroplastic-like isoform X2 OS=Cucurbita maxi...	[more]
A0A6J1HI09	6.6e-76	86.17	copper-transporting ATPase PAA1, chloroplastic-like isoform X2 OS=Cucurbita mosc...	[more]
A0A1S3BZZ1	3.3e-75	84.85	copper-transporting ATPase PAA1, chloroplastic-like OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of ClCG09G015420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G33520.1	7.0e-30	52.98	P-type ATP-ase 1	[more]
AT4G33520.2	4.5e-29	54.11	P-type ATP-ase 1	[more]
AT4G33520.3	4.5e-29	54.11	P-type ATP-ase 1	[more]
AT5G21930.1	6.4e-07	42.50	P-type ATPase of Arabidopsis 2	[more]
AT5G21930.2	6.4e-07	42.50	P-type ATPase of Arabidopsis 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (Charleston Gray) v2.5
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 116..168 e-value: 2.9E-9 score: 37.2
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 111..185 score: 14.058728
IPR006121	Heavy metal-associated domain, HMA	CDD	cd00371	HMA	coord: 116..157 e-value: 1.49564E-11 score: 55.6897
None	No IPR available	GENE3D	3.30.70.100		coord: 110..188 e-value: 1.6E-15 score: 59.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..96
None	No IPR available	PANTHER	PTHR43520	ATP7, ISOFORM B	coord: 100..184
None	No IPR available	PANTHER	PTHR43520:SF22	COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC	coord: 100..184
IPR017969	Heavy-metal-associated, conserved site	PROSITE	PS01047	HMA_1	coord: 116..145
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 112..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G015420.1	ClCG09G015420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055070	copper ion homeostasis
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0043682	P-type divalent copper transporter activity
molecular_function	GO:0046872	metal ion binding