ClCG09G014620 (gene) Watermelon (Charleston Gray) v2.5

Overview
NameClCG09G014620
Typegene
OrganismCitrullus lanatus subsp. vulgaris cv. Charleston Gray (Watermelon (Charleston Gray) v2.5)
DescriptionUnknown protein
LocationCG_Chr09: 26837112 .. 26838169 (-)
RNA-Seq ExpressionClCG09G014620
SyntenyClCG09G014620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAGAAATCCTCAAGAACACCTAAACCCCGTTTGCATGGAGTTTTCAAAGGGAAGAAATGGGGCTGAGAGTTACTTCAGATCACTGGCTCAATATCCTGTCCTTGGTTTTGGTTCGAGAACATGTGGTTAGACTTTAGAGCATCCTTCTTTTAAGGCTAATATTTCCTCTTGGTGGAATGTTGCGGTTCCTAGGAAGAGGGAAGGATCGCTTTATGTGGAAGTAGAGGTCGAAAATGGGGCTCTTAAATCTTGGAATTAAGAGGTTTTTACAGACATTAAGGATAAGAAACAAAAGATTCTACACAAAATCAATGAGCCTGACTTAAAGGAACTGGAGGGCCCTTTGGAGGCTGCTGAGAAAGAGGAGAGGGTTTTTCTGAAAAGGGAGTTTGTTGAGGTGATCAGAAAAGAATCCATCAGTTGGTGTCAAAAGGCCAAGGTGAAATTGAAATGGGCTAAGGGAGGAGAGATTGTAATACTTATTTCTTCCATAGGCCAAGCCGTTGGGATCCCGCAGGTTTAGTGGAAACTTGAGGATTTGGTCAATGAGCTCAGCTTCTTTCTCATTTGGTTTCCGTTGTTTGTTGACCAATAAGGTGACAACAGCAGTTGTTTCAATCCTATCTTTTGATAGGAGAGTTTGATTTTAGGCTAGGGAGAAGGGGCATTCGTGTTTAGAGCCTCAGTCATTTTGATGGTTTCTCTTGTAAGTCCTTTCAATGTTTGTTGGATCTCTTTCCCGCTAGTGAGTTTGTCTTTGATTCACTTTGGAGGATTAAGATTCCAAAAGAAGTTAAGTTCTTTCCCTTAGTTGGTCGATTCTATTGTATTCTCAGCCTGAAGGTGGAGGAAGATCTAAATCACTTGTTTTGGATGTGTAAGTTTGTGAGGTCGATGTAGGACCACTTCCTCCAGGAGTTTGATTTCAAGTTGGCTCATAGAGGGATATTAGTAGTTCAATTAGGAGTTCTTTCTTCATCCACCTTTTCGGCAGAATGGACAATTTTTGTGGTTAGTTGGGATGCACAATCTGTTATGGGTTTTGTGGGGTGA

mRNA sequence

ATGAGGAGAAATCCTCAAGAACACCTAAACCCCGTTTGCATGGAGTTTTCAAAGGGAAGAAATGGGGCTGAGAGTTACTTCAGATCACTGGCTCAATATCCTACTTTAGAGCATCCTTCTTTTAAGGCTAATATTTCCTCTTGGTGGAATGTTGCGGTTCCTAGGAAGAGGGAAGGATCGCTTTATGTGGAAGTAGAGGATAAGAAACAAAAGATTCTACACAAAATCAATGAGCCTGACTTAAAGGAACTGGAGGGCCCTTTGGAGGCTGCTGAGAAAGAGGAGAGGGTTTTTCTGAAAAGGGAGTTTGTTGAGGTGATCAGAAAAGAATCCATCAGTTGGTGTCAAAAGGCCAAGGCCAAGCCGTTGGGATCCCGCAGGTTTAGTGGAAACTTGAGGATTTGGTCAATGAGCTCAGCTTCTTTCTCATTTGGTTTCCGTTGTTTGTTGACCAATAAGGGAGAAGGGGCATTCGTGTTTAGAGCCTCAGTCATTTTGATGGTTTCTCTTGACCACTTCCTCCAGGAGTTTGATTTCAAGTTGGCTCATAGAGGGATATTAGTAGTTCAATTAGGAGTTCTTTCTTCATCCACCTTTTCGGCAGAATGGACAATTTTTGTGGTTAGTTGGGATGCACAATCTGTTATGGGTTTTGTGGGGTGA

Coding sequence (CDS)

ATGAGGAGAAATCCTCAAGAACACCTAAACCCCGTTTGCATGGAGTTTTCAAAGGGAAGAAATGGGGCTGAGAGTTACTTCAGATCACTGGCTCAATATCCTACTTTAGAGCATCCTTCTTTTAAGGCTAATATTTCCTCTTGGTGGAATGTTGCGGTTCCTAGGAAGAGGGAAGGATCGCTTTATGTGGAAGTAGAGGATAAGAAACAAAAGATTCTACACAAAATCAATGAGCCTGACTTAAAGGAACTGGAGGGCCCTTTGGAGGCTGCTGAGAAAGAGGAGAGGGTTTTTCTGAAAAGGGAGTTTGTTGAGGTGATCAGAAAAGAATCCATCAGTTGGTGTCAAAAGGCCAAGGCCAAGCCGTTGGGATCCCGCAGGTTTAGTGGAAACTTGAGGATTTGGTCAATGAGCTCAGCTTCTTTCTCATTTGGTTTCCGTTGTTTGTTGACCAATAAGGGAGAAGGGGCATTCGTGTTTAGAGCCTCAGTCATTTTGATGGTTTCTCTTGACCACTTCCTCCAGGAGTTTGATTTCAAGTTGGCTCATAGAGGGATATTAGTAGTTCAATTAGGAGTTCTTTCTTCATCCACCTTTTCGGCAGAATGGACAATTTTTGTGGTTAGTTGGGATGCACAATCTGTTATGGGTTTTGTGGGGTGA

Protein sequence

MRRNPQEHLNPVCMEFSKGRNGAESYFRSLAQYPTLEHPSFKANISSWWNVAVPRKREGSLYVEVEDKKQKILHKINEPDLKELEGPLEAAEKEERVFLKREFVEVIRKESISWCQKAKAKPLGSRRFSGNLRIWSMSSASFSFGFRCLLTNKGEGAFVFRASVILMVSLDHFLQEFDFKLAHRGILVVQLGVLSSSTFSAEWTIFVVSWDAQSVMGFVG
Homology
[Close]
BLAST of ClCG09G014620 vs. NCBI nr
Match: KAA0057384.1 (hypothetical protein E6C27_scaffold280G002530 [Cucumis melo var. makuwa] >TYK30082.1 hypothetical protein E5676_scaffold216G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 69.3 bits (168), Expect = 4.6e-08
Identity = 40/105 (38.10%), Postives = 60/105 (57.14%), Query Frame = 0 

Query: 36  LEHPSFKANISSWWNVAVPRKREGSLYVE-------------------VEDKKQKILHKI 95
           LEHPSFKAN SSWW+++V  +  G  ++E                   ++ K ++I+ +I
Sbjct: 3   LEHPSFKANFSSWWSMSVQGRWNGYHFMEKLRALKIKLRVWNNEVFGDIQVKMKEIIKRI 62

Query: 96  NEPDLKELEGPLEAAEKEERVFLKREFVEVIRKESISWCQKAKAK 122
            + D  EL+ P + + K ER  LK +F EVI+ E+ISW +KAK K
Sbjct: 63  EKIDAFELDVPSDGSLKGERDCLKEDFTEVIKNENISWNKKAKVK 107

[Close]
BLAST of ClCG09G014620 vs. NCBI nr
Match: XP_010256226.1 (PREDICTED: uncharacterized protein LOC104596672 [Nelumbo nucifera])

HSP 1 Score: 63.2 bits (152), Expect = 3.3e-06
Identity = 49/158 (31.01%), Postives = 72/158 (45.57%), Query Frame = 0 

Query: 36  LEHPSFKANISSWWNVAVPRKREGSL--------------------YVEVEDKKQKILHK 95
           L+ PSFK  +  WW    PR R+  +                    +  +E+ +++I  +
Sbjct: 47  LKDPSFKLRVKDWWEEGRPRNRKKGVRFMRTLKALKGKTKDWNKDHFGRIEEGQERISSR 106

Query: 96  INEPDLKELEGPLEAAEKEERVFLKREFVEVIRKESISWCQKAKAKPLGSRRFSGNLRIW 155
           I E D+KE +      E+EER  LK E  E++R E ISW QK++ K L   +   N R +
Sbjct: 107 IEELDIKEAQRNFSEEEREERWKLKVELEEILRNEEISWRQKSRCKWLQGDK---NTRFF 166

Query: 156 SMSSASFSFGFRCLLTNKGEGAFVFRASVILMVSLDHF 174
             S AS       + T   +G  V R   I+ V LDHF
Sbjct: 167 H-SLASGKRSKNLITTVVVDGIEVRREEEIVKVFLDHF 200

[Close]
BLAST of ClCG09G014620 vs. NCBI nr
Match: TYK03178.1 (hypothetical protein E5676_scaffold11G00830 [Cucumis melo var. makuwa])

HSP 1 Score: 63.2 bits (152), Expect = 3.3e-06
Identity = 32/74 (43.24%), Postives = 50/74 (67.57%), Query Frame = 0 

Query: 48  WWNVAVPRKREGSLYVEVEDKKQKILHKINEPDLKELEGPLEAAEKEERVFLKREFVEVI 107
           WWN          ++ +++ KK++++ +I+E D  ELEGPL++A KEERV  K +  E+I
Sbjct: 421 WWN--------RDVFGDIQIKKKEVVARIHEIDALELEGPLDSALKEERVSSKGDLAEMI 480

Query: 108 RKESISWCQKAKAK 122
           RKE++SW QK+K K
Sbjct: 481 RKENVSWSQKSKIK 486

[Close]
BLAST of ClCG09G014620 vs. ExPASy TrEMBL
Match: A0A5A7UQK0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00550 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.2e-08
Identity = 40/105 (38.10%), Postives = 60/105 (57.14%), Query Frame = 0 

Query: 36  LEHPSFKANISSWWNVAVPRKREGSLYVE-------------------VEDKKQKILHKI 95
           LEHPSFKAN SSWW+++V  +  G  ++E                   ++ K ++I+ +I
Sbjct: 3   LEHPSFKANFSSWWSMSVQGRWNGYHFMEKLRALKIKLRVWNNEVFGDIQVKMKEIIKRI 62

Query: 96  NEPDLKELEGPLEAAEKEERVFLKREFVEVIRKESISWCQKAKAK 122
            + D  EL+ P + + K ER  LK +F EVI+ E+ISW +KAK K
Sbjct: 63  EKIDAFELDVPSDGSLKGERDCLKEDFTEVIKNENISWNKKAKVK 107

[Close]
BLAST of ClCG09G014620 vs. ExPASy TrEMBL
Match: A0A5D3BW32 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00830 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-06
Identity = 32/74 (43.24%), Postives = 50/74 (67.57%), Query Frame = 0 

Query: 48  WWNVAVPRKREGSLYVEVEDKKQKILHKINEPDLKELEGPLEAAEKEERVFLKREFVEVI 107
           WWN          ++ +++ KK++++ +I+E D  ELEGPL++A KEERV  K +  E+I
Sbjct: 421 WWN--------RDVFGDIQIKKKEVVARIHEIDALELEGPLDSALKEERVSSKGDLAEMI 480

Query: 108 RKESISWCQKAKAK 122
           RKE++SW QK+K K
Sbjct: 481 RKENVSWSQKSKIK 486

[Close]
BLAST of ClCG09G014620 vs. ExPASy TrEMBL
Match: A0A1U7ZPY1 (uncharacterized protein LOC104596672 OS=Nelumbo nucifera OX=4432 GN=LOC104596672 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.6e-06
Identity = 49/158 (31.01%), Postives = 72/158 (45.57%), Query Frame = 0 

Query: 36  LEHPSFKANISSWWNVAVPRKREGSL--------------------YVEVEDKKQKILHK 95
           L+ PSFK  +  WW    PR R+  +                    +  +E+ +++I  +
Sbjct: 47  LKDPSFKLRVKDWWEEGRPRNRKKGVRFMRTLKALKGKTKDWNKDHFGRIEEGQERISSR 106

Query: 96  INEPDLKELEGPLEAAEKEERVFLKREFVEVIRKESISWCQKAKAKPLGSRRFSGNLRIW 155
           I E D+KE +      E+EER  LK E  E++R E ISW QK++ K L   +   N R +
Sbjct: 107 IEELDIKEAQRNFSEEEREERWKLKVELEEILRNEEISWRQKSRCKWLQGDK---NTRFF 166

Query: 156 SMSSASFSFGFRCLLTNKGEGAFVFRASVILMVSLDHF 174
             S AS       + T   +G  V R   I+ V LDHF
Sbjct: 167 H-SLASGKRSKNLITTVVVDGIEVRREEEIVKVFLDHF 200

The following BLAST results are available for this feature:
BLAST of ClCG09G014620 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0057384.14.6e-0838.10hypothetical protein E6C27_scaffold280G002530 [Cucumis melo var. makuwa] >TYK300... [more]
XP_010256226.13.3e-0631.01PREDICTED: uncharacterized protein LOC104596672 [Nelumbo nucifera][more]
TYK03178.13.3e-0643.24hypothetical protein E5676_scaffold11G00830 [Cucumis melo var. makuwa][more]
BLAST of ClCG09G014620 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of ClCG09G014620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UQK02.2e-0838.10Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BW321.6e-0643.24Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1U7ZPY11.6e-0631.01uncharacterized protein LOC104596672 OS=Nelumbo nucifera OX=4432 GN=LOC104596672... [more]
BLAST of ClCG09G014620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG09G014620.1ClCG09G014620.1mRNA